"Pathway"	"Pathway.source"	"Annotation.score"	"p.value.score"	"No.of.genes"	"p.value.genes"
"IN ALL DATA SETS"	""	"sum.of.scores"	"sum.of.genes"	""	""
"ORGAN DATA SET"	"quantDE"	"5.510695"	"maxDE"	"7.5092889"	"ORGAN DATA SET"
"Stilbene, coumarine and lignin biosynthesis"	"KEGG"	"42"	"2.44976578866962e-32"	"15"	"1.14786891171094e-11"
"Methane metabolism"	"KEGG"	"36"	"2.71962168887439e-33"	"15"	"4.37945608986417e-13"
"Phenylalanine metabolism"	"KEGG"	"32"	"1.65889504519852e-23"	"14"	"2.09058793568625e-11"
"Prostaglandin and leukotriene metabolism"	"KEGG"	"32"	"8.6397003756256e-35"	"14"	"2.24273221492214e-13"
"monoterpenoid biosynthesis"	"TAIR-GO"	"19"	"1.60826208692382e-37"	"2"	"9.0534758972496e-07"
"mono-/sesqui-/di-terpene biosynthesis"	"LitPath"	"19"	"5.40706280415934e-09"	"2"	"0.044144277270024"
"monoterpene biosynthesis"	"LitPath"	"19"	"1.53587249658230e-20"	"2"	"0.000151906445981210"
"terpenoid metabolism"	"LitPath"	"19"	"5.97191929568979e-09"	"2"	"0.0479017987948161"
"detoxification"	"FunCat"	"17"	"0"	"5"	"0"
"triterpene, sterol, and brassinosteroid metabolism"	"LitPath"	"17"	"0.00642458977185487"	"4"	"0.024970293381762"
"Phenylpropanoid Metabolism"	"BioPath"	"16"	"4.23985944048325e-10"	"3"	"0.00263462330514832"
"isoprenoid biosynthesis "	"FunCat"	"14"	"3.65003987682805e-07"	"3"	"0.00355811762432434"
"lipid, fatty acid and isoprenoid biosynthesis "	"FunCat"	"14"	"6.4833477590134e-08"	"3"	"0.00211926554955659"
"Miscellaneous acyl lipid metabolism"	"AcylLipid"	"14"	"0.000831821390162475"	"7"	"0.000638743925196023"
"Biosynthesis of steroids"	"KEGG"	"13"	"5.16614236845453e-05"	"2"	"0.0522716701049514"
"triterpene biosynthesis"	"LitPath"	"13"	"5.88191408211451e-10"	"2"	"0.00167614043675958"
"detoxification involving cytochrome P450 "	"FunCat"	"11"	"9.96967100760806e-18"	"2"	"0.000223227257889398"
"Glucosyltransferases for benzoic acids"	"BioPath"	"10"	"5.2959941962483e-14"	"1"	"0.000976625736676473"
"fatty acid metabolism"	"TAIR-GO"	"10"	"1.21389658502467e-09"	"1"	"0.0111491369832807"
"secondary metabolism"	"FunCat"	"10"	"1.36066562523854e-05"	"3"	"0.00334967472754827"
"Ascorbate and aldarate metabolism"	"KEGG"	"10"	"3.19811041612518e-06"	"1"	"0.0770094754813048"
"Fluorene degradation"	"KEGG"	"10"	"2.28071855475500e-08"	"1"	"0.0303216584244865"
"gamma-Hexachlorocyclohexane degradation"	"KEGG"	"10"	"1.04521987110627e-07"	"1"	"0.0383544039179121"
"Fatty acid elongation and wax and cutin metabolism"	"AcylLipid"	"10"	"0.000334282589733718"	"1"	"0.322563444390759"
"fatty acid modulation"	"LitPath"	"10"	"1.55564007475902e-13"	"1"	"0.000664694305785447"
"monoterpene biosynthesis"	"AraCyc"	"9"	"1.45553363706313e-18"	"1"	"7.87952691166878e-05"
"plant monoterpene biosynthesis"	"AraCyc"	"9"	"6.88577903928253e-21"	"1"	"2.63487154624802e-05"
"storage protein"	"FunCat"	"8"	"3.75436807426257e-14"	"2"	"1.06745968542178e-05"
"pentacyclic triterpenoid biosynthesis"	"TAIR-GO"	"7"	"8.29779280410593e-10"	"1"	"0.00110892641447936"
"cation transport (Na, K, Ca , NH4, etc.) "	"FunCat"	"7"	"1.28426523047964e-11"	"1"	"0.000324218495522559"
"heavy metal ion transport (Cu, Fe, etc.)"	"FunCat"	"7"	"6.65620753621699e-13"	"1"	"0.000108794870157031"
"ion transport "	"FunCat"	"7"	"0"	"1"	"0"
"transport "	"FunCat"	"7"	"1.18929289944228e-12"	"1"	"0.000324218495522559"
"transport facilitation"	"FunCat"	"7"	"0"	"1"	"0.000324218495522559"
"transported compounds (substrates)"	"FunCat"	"7"	"0"	"1"	"0"
"STRESS DATA SET"	"quantDE"	"2.438325"	"maxDE"	"7.866343"	"STRESS DATA SET"
"triterpene, sterol, and brassinosteroid metabolism"	"LitPath"	"10"	"5.28478187617297e-07"	"3"	"0.00242252698838277"
"secondary metabolism"	"FunCat"	"8"	"3.60268098393849e-10"	"2"	"0.000740094101211974"
"isoprenoid biosynthesis "	"FunCat"	"7"	"1.17266250574287e-07"	"2"	"0.000777051433285708"
"lipid, fatty acid and isoprenoid biosynthesis "	"FunCat"	"7"	"4.18710358701822e-08"	"2"	"0.000512714146973765"
"HORMONE DATA SET"	"quantDE"	"2.263577"	"maxDE"	"7.3491224"	"HORMONE DATA SET"
"Stilbene, coumarine and lignin biosynthesis"	"KEGG"	"32"	"5.67180593385292e-26"	"4"	"0.000141529125220637"
"Phenylpropanoid Metabolism"	"BioPath"	"30"	"7.23792450346445e-12"	"4"	"0.00263010045370816"
"response to UV"	"TAIR-GO"	"20"	"5.85266611096943e-25"	"2"	"3.63560798833129e-05"
"Ascorbate and aldarate metabolism"	"KEGG"	"20"	"2.88744191891252e-19"	"2"	"0.000288407452351401"
"Fluorene degradation"	"KEGG"	"20"	"6.61676994700481e-24"	"2"	"5.90718865749014e-05"
"gamma-Hexachlorocyclohexane degradation"	"KEGG"	"20"	"1.74263971382172e-22"	"2"	"8.76717777569659e-05"
"flavonoid, anthocyanin, and proanthocyanidin biosynthesis"	"LitPath"	"20"	"3.92329486904569e-12"	"2"	"0.00266717697906095"
"proanthocyanidin biosynthesis"	"LitPath"	"20"	"3.92329486904569e-12"	"2"	"0.00266717697906095"
"monoterpenoid biosynthesis"	"TAIR-GO"	"19"	"1.25387825338982e-33"	"2"	"5.22717184178834e-07"
"mono-/sesqui-/di-terpene biosynthesis"	"LitPath"	"19"	"3.67128620304541e-06"	"2"	"0.0508208416132439"
"monoterpene biosynthesis"	"LitPath"	"19"	"4.4226129218657e-17"	"2"	"0.000179982329098447"
"terpenoid metabolism"	"LitPath"	"19"	"4.00922170864475e-06"	"2"	"0.0550871349632537"
"Biosynthesis of Amino Acids and Derivatives"	"BioPath"	"18"	"0.000294194923841802"	"2"	"0.0739038287748763"
"Glutathione metabolism"	"BioPath"	"18"	"4.03357707657544e-10"	"2"	"0.0074051849580872"
"anthocyanin biosynthesis"	"AraCyc"	"14"	"2.36838550000592e-19"	"2"	"6.06625282637224e-05"
"Flavonoid biosynthesis"	"KEGG"	"14"	"6.56426557761218e-16"	"2"	"7.24516326022075e-05"
"core phenylpropanoid metabolism"	"BioPath"	"12"	"3.04781916676073e-07"	"2"	"0.00219160969480616"
"colanic acid building blocks biosynthesis"	"AraCyc"	"12"	"1.63040915900845e-07"	"3"	"0.000725253831000638"
"detoxification"	"FunCat"	"11"	"0"	"2"	"0"
"detoxification involving cytochrome P450 "	"FunCat"	"11"	"2.01620650275164e-20"	"2"	"2.37752091908164e-05"
"Flavonoid and anthocyanin metabolism"	"BioPath"	"10"	"3.99626265876424e-07"	"1"	"0.042083009517457"
"anthocyanin biosynthesis "	"TAIR-GO"	"10"	"0"	"1"	"0"
"fatty acid metabolism"	"TAIR-GO"	"10"	"8.63943553865769e-08"	"1"	"0.00798523184963205"
"glucosinolate biosynthesis"	"TAIR-GO"	"10"	"1.1104001259609e-11"	"1"	"0.000785138855097489"
"glutathione metabolism"	"TAIR-GO"	"10"	"0"	"1"	"0"
"phenylpropanoid metabolism"	"TAIR-GO"	"10"	"3.359403078994e-13"	"1"	"0.000423195781294186"
"ascorbate glutathione cycle"	"AraCyc"	"10"	"6.76667562681441e-10"	"1"	"0.00613452667125539"
"flavonoid biosynthesis"	"AraCyc"	"10"	"1.08224929855577e-08"	"1"	"0.0170484530978922"
"formylTHF biosynthesis"	"AraCyc"	"10"	"2.26833524040220e-10"	"1"	"0.00774895653495928"
"glucosinolate biosynthesis from homomethionine"	"AraCyc"	"10"	"4.53900125845675e-13"	"1"	"0.000538175261556935"
"glucosinolate biosynthesis from phenylalanine"	"AraCyc"	"10"	"3.02836286170902e-14"	"1"	"0.000324421322182061"
"lignin biosynthesis"	"AraCyc"	"10"	"1.24664389519645e-05"	"1"	"0.0424749511034442"
"photorespiration"	"AraCyc"	"10"	"1.64594160347931e-08"	"1"	"0.0263787262727322"
"suberin biosynthesis"	"AraCyc"	"10"	"2.09810263452479e-08"	"1"	"0.00774895653495928"
"biogenesis of chloroplast"	"FunCat"	"10"	"6.44347821053529e-06"	"1"	"0.0379330556853757"
"ionic homeostasis "	"FunCat"	"10"	"0"	"1"	"0"
"Glutamate metabolism"	"KEGG"	"10"	"2.10043865581752e-05"	"1"	"0.0219118640849144"
"Glutathione metabolism"	"KEGG"	"10"	"4.43121439986734e-06"	"1"	"0.0209603221878325"
"Fatty acid elongation and wax and cutin metabolism"	"AcylLipid"	"10"	"5.77699652192198e-09"	"1"	"0.0362423509904207"
"anthocyanin biosynthesis"	"LitPath"	"10"	"0"	"1"	"0"
"fatty acid modulation"	"LitPath"	"10"	"1.14241617964237e-11"	"1"	"0.000742893635877853"
"general phenylpropanoid pathway"	"LitPath"	"10"	"0"	"1"	"0"
"monoterpene biosynthesis"	"AraCyc"	"9"	"3.44227541385131e-14"	"1"	"0.000162972610209130"
"plant monoterpene biosynthesis"	"AraCyc"	"9"	"1.71119834472826e-16"	"1"	"5.45794820294232e-05"
"Sequestration of phenylpropanoids (cytosol --> vacuole)"	"BioPath"	"8"	"7.57570044868102e-16"	"1"	"3.41372076788235e-05"
"toxin catabolism"	"TAIR-GO"	"8"	"5.49804233381854e-07"	"1"	"0.0247853606656348"
"secondary metabolism"	"FunCat"	"8"	"7.8763835231424e-06"	"2"	"0.00318052754713642"
"MUTANT DATA SET"	"quantDE"	"4.312803"	"maxDE"	"7.858765775"	"MUTANT DATA SET"
"Photosystems "	"BioPath"	"64"	"2.10831652339131e-22"	"9"	"2.63382459340989e-05"
"glycolysis and gluconeogenesis"	"FunCat"	"62"	"1.77192519618123e-21"	"8"	"0.000526746787483641"
"Intermediary Carbon Metabolism"	"BioPath"	"52"	"1.35849306033435e-11"	"7"	"0.0101895201408826"
"C-compound and carbohydrate metabolism"	"FunCat"	"52"	"0.000380589986396144"	"6"	"0.293151037699521"
"acetate fermentation"	"AraCyc"	"38"	"1.23188687416607e-18"	"6"	"0.000307967582656509"
"fructose degradation (anaerobic)"	"AraCyc"	"38"	"1.50005170385685e-19"	"6"	"0.000190072274244334"
"glycolysis I"	"AraCyc"	"38"	"1.22724379356588e-09"	"6"	"0.0117769747129081"
"glycolysis IV"	"AraCyc"	"38"	"1.96869117176154e-19"	"6"	"0.000210098500310163"
"sorbitol fermentation"	"AraCyc"	"38"	"1.58576594274941e-18"	"6"	"0.000255270197746228"
"additional photosystem II components"	"BioPath"	"36"	"6.00779508788153e-18"	"4"	"0.000828576660011297"
"Carbon fixation"	"KEGG"	"36"	"1.46837867967239e-16"	"5"	"0.000423858408395592"
"glycerol degradation II"	"AraCyc"	"34"	"3.73665284101708e-20"	"5"	"0.000203306675101948"
"gluconeogenesis"	"AraCyc"	"28"	"2.86988687164425e-13"	"4"	"0.00165789175684474"
"glyceraldehyde 3-phosphate degradation"	"AraCyc"	"28"	"1.58987129021971e-22"	"4"	"6.38757027724832e-05"
"protein synthesis"	"FunCat"	"28"	"0.00176299014586715"	"5"	"0.0414048297819813"
"ATP synthase components"	"BioPath"	"26"	"2.38581546796271e-26"	"3"	"2.53286854640105e-05"
"Gluconeogenesis from lipids in seeds"	"BioPath"	"26"	"4.02004156770439e-07"	"4"	"0.00976730790995325"
"ATP synthesis coupled proton transport"	"TAIR-GO"	"26"	"3.76258454386972e-33"	"3"	"2.15158807858244e-06"
"proton transport"	"TAIR-GO"	"26"	"3.76258454386972e-33"	"3"	"2.15158807858244e-06"
"Calvin cycle"	"AraCyc"	"26"	"2.71566898333035e-14"	"4"	"0.000757727045098794"
"photosynthesis"	"FunCat"	"26"	"1.87593789716703e-09"	"3"	"0.0118754640128690"
"Glycolysis / Gluconeogenesis"	"KEGG"	"26"	"4.7155388004599e-08"	"4"	"0.00620991320965042"
"isoprenoid biosynthesis "	"FunCat"	"25"	"1.58285537571781e-06"	"5"	"0.00135895500079531"
"lipid, fatty acid and isoprenoid biosynthesis "	"FunCat"	"25"	"1.21003470949726e-07"	"5"	"0.000638787374453969"
"Methionine metabolism"	"KEGG"	"20"	"1.06863763226054e-13"	"3"	"0.000205489751096335"
"Ascorbate and aldarate metabolism"	"KEGG"	"18"	"8.66233333175271e-10"	"2"	"0.00629034368780543"
"Translation factors"	"KEGG"	"16.5"	"0.000268766431813437"	"3"	"0.0424257408833165"
"Cytochrome b6/f complex"	"BioPath"	"16"	"3.76081257536422e-15"	"2"	"0.000549856380778922"
"Methionin/SAM/ethylene metabolism from cysteine and aspartate"	"BioPath"	"16"	"2.67571033616025e-06"	"2"	"0.0198823132599657"
"response to heat"	"TAIR-GO"	"16"	"2.54270083953789e-11"	"2"	"0.00325950023520255"
"methionine degradation I"	"AraCyc"	"16"	"7.9433515998512e-14"	"2"	"0.000779730910868619"
"biogenesis of chloroplast"	"FunCat"	"16"	"0.0273154373997511"	"2"	"0.128704107834795"
"transport "	"FunCat"	"16"	"1.86544799785425e-26"	"2"	"8.27062071258568e-06"
"transport facilitation"	"FunCat"	"16"	"0"	"2"	"8.27062071258568e-06"
"Photosynthesis"	"KEGG"	"16"	"1.77551298561868e-07"	"3"	"0.00149429489363017"
"Selenoamino acid metabolism"	"KEGG"	"16"	"7.14390735058526e-07"	"2"	"0.0105148663729821"
"Fatty acid elongation and wax and cutin metabolism"	"AcylLipid"	"16"	"4.64193209741591e-12"	"3"	"0.000735698760873993"
"triterpene, sterol, and brassinosteroid metabolism"	"LitPath"	"15"	"4.17278978913762e-06"	"3"	"0.00747685577731856"
"C-compound, carbohydrate catabolism"	"FunCat"	"14"	"9.52537017604314e-06"	"3"	"0.0092746512479115"
"translation"	"FunCat"	"14"	"1.07053979228404e-09"	"2"	"0.00734182637607115"
"Biosynthesis of steroids"	"KEGG"	"13"	"0.0107966176450762"	"2"	"0.0330601578875092"
"triterpene biosynthesis"	"LitPath"	"13"	"9.758882277961e-15"	"2"	"0.000185171423880544"
"photosynthesis"	"TAIR-GO"	"12"	"6.03934981051698e-05"	"2"	"0.0145421640242708"
"detoxification"	"FunCat"	"11"	"0"	"2"	"0"
"detoxification involving cytochrome P450 "	"FunCat"	"11"	"5.510441445703e-12"	"2"	"0.00159318393752875"
"Branched-chain amino acids from aspartate"	"BioPath"	"10"	"0.00109207749289365"	"1"	"0.084949855696179"
"Plastocyanin"	"BioPath"	"10"	"1.33185865325286e-13"	"1"	"0.000377216144851"
"sucrose metabolism"	"BioPath"	"10"	"0.000177149312015981"	"1"	"0.052136047941987"
"Translation (chloroplast)"	"BioPath"	"10"	"3.68036721208244e-09"	"1"	"0.00743695355019696"
"chloroplast ATP synthase complex"	"TAIR-GO"	"10"	"4.10945201640273e-13"	"1"	"0.000688579703100634"
"fatty acid metabolism"	"TAIR-GO"	"10"	"0.0084996783598083"	"1"	"0.140395996273093"
"glucosinolate biosynthesis"	"TAIR-GO"	"10"	"6.3735101344688e-06"	"1"	"0.0174036646492648"
"glycolysis"	"TAIR-GO"	"10"	"1.89280934064808e-13"	"1"	"0.000688579703100634"
"methylation-dependent chromatin silencing"	"TAIR-GO"	"10"	"0"	"1"	"0"
"posttranscriptional gene silencing"	"TAIR-GO"	"10"	"0"	"1"	"0"
"proton-transporting ATP synthase, catalytic core (sensu Eukaryota)"	"TAIR-GO"	"10"	"0"	"1"	"0"
"response to chemical substance"	"TAIR-GO"	"10"	"0"	"1"	"0"
"response to oxidative stress"	"TAIR-GO"	"10"	"2.71045626317232e-11"	"1"	"0.00654120080837004"
"response to stress"	"TAIR-GO"	"10"	"2.63618665745391e-09"	"1"	"0.00399234017303846"
"response to sucrose stimulus"	"TAIR-GO"	"10"	"6.27953566465759e-09"	"1"	"0.00964591613792358"
"response to UV"	"TAIR-GO"	"10"	"9.28445888124461e-05"	"1"	"0.0445549732618511"
"biosynthesis of proto- and siroheme"	"AraCyc"	"10"	"0.0122939967124272"	"1"	"0.190394346888050"
"homomethionine biosynthesis"	"AraCyc"	"10"	"0"	"1"	"0"
"lactose degradation IV"	"AraCyc"	"10"	"2.43380359455169e-11"	"3"	"4.51347715252998e-06"
"leucine biosynthesis"	"AraCyc"	"10"	"5.26764558163577e-07"	"1"	"0.0378727495616143"
"methionine and S-adenosylmethionine synthesis"	"AraCyc"	"10"	"1.09371958379539e-09"	"2"	"0.000137522257048485"
"sugar, glucoside, polyol and carboxylate catabolism "	"FunCat"	"10"	"5.76264768682312e-07"	"2"	"0.00315291479642526"
"transport ATPases"	"FunCat"	"10"	"0.00319053342018244"	"1"	"0.139207382304534"
"ATP synthesis"	"KEGG"	"10"	"0.00169554321611064"	"1"	"0.125662622095101"
"Fluorene degradation"	"KEGG"	"10"	"5.7663450574901e-06"	"1"	"0.0215633024674318"
"Fructose and mannose metabolism"	"KEGG"	"10"	"0.0147686188368821"	"2"	"0.0330601578875092"
"Galactose metabolism"	"KEGG"	"10"	"0.00115663151374867"	"1"	"0.0816868556949626"
"gamma-Hexachlorocyclohexane degradation"	"KEGG"	"10"	"2.33453854389308e-05"	"1"	"0.0273853208916094"
"Glyoxylate and dicarboxylate metabolism"	"KEGG"	"10"	"0.000361265098450729"	"1"	"0.0683615308043713"
"Pentose phosphate pathway"	"KEGG"	"10"	"0.00215748590801392"	"2"	"0.024503116166371"
"Valine, leucine and isoleucine biosynthesis"	"KEGG"	"10"	"0.000603183718301602"	"1"	"0.0816868556949626"
"fatty acid modulation"	"LitPath"	"10"	"2.21395527843000e-17"	"1"	"0.000156398660184811"
"Glucosinolate Metabolism"	"LitPath"	"10"	"5.55800987630494e-06"	"1"	"0.023772229181552"
"ascorbic acid biosynthesis"	"BioPath"	"8"	"0.00309222529900322"	"1"	"0.0624639807691166"
"response to reactive oxygen species"	"TAIR-GO"	"8"	"0"	"1"	"0"
"ascorbate glutathione cycle"	"AraCyc"	"8"	"0.000526513009123017"	"1"	"0.0378727495616143"
"Miscellaneous acyl lipid metabolism"	"AcylLipid"	"8"	"0.0455460004828983"	"2"	"0.123637466707775"
"pentacyclic triterpenoid biosynthesis"	"TAIR-GO"	"7"	"0.000260226505489038"	"1"	"0.0174036646492648"