"Pathway" "Pathway.source" "V3" "V4" "V5" "V6" "IN ALL DATA SETS" "" "sum.of.scores" "sum.of.genes" "" "" "Glutathione metabolism" "BioPath" "56" "8" "" "" "Glutathione metabolism" "KEGG" "56" "8" "" "" "ORGAN DATA SET" "quantDE" "6.366101" "maxDE" "7.4937224" "ORGAN DATA SET" "Biosynthesis of Amino Acids and Derivatives" "BioPath" "46" "2.77009204438969e-24" "6" "3.78744825880698e-05" "Glutathione metabolism" "BioPath" "22" "1.77218779288328e-13" "3" "0.000773811967237113" "toxin catabolism" "TAIR-GO" "22" "2.72901349945583e-21" "3" "0.000727197882323083" "Glutathione metabolism" "KEGG" "22" "1.26263895067531e-18" "3" "0.000228713044926593" "Stilbene, coumarine and lignin biosynthesis" "KEGG" "19" "3.67332226662503e-12" "3" "0.00573496411454056" "Methionin/SAM/ethylene metabolism from cysteine and aspartate" "BioPath" "16" "1.81649976189302e-13" "2" "0.000798667586480204" "intracellular signalling" "FunCat" "13" "2.05069928163819e-12" "3" "0.000102721589184796" "Benzoate degradation via CoA ligation" "KEGG" "13" "7.63538323740009e-07" "3" "0.00391624783927528" "Inositol phosphate metabolism" "KEGG" "13" "2.41699108080767e-06" "3" "0.00533323666365008" "Nicotinate and nicotinamide metabolism" "KEGG" "13" "1.39139460843903e-07" "3" "0.00290835869748297" "lignin biosynthesis" "AraCyc" "12" "4.27750793764681e-14" "2" "0.000100169263804579" "Phenylpropanoid pathway" "LitPath" "12" "2.37274909579133e-10" "2" "0.00152238425021599" "core phenylpropanoid metabolism" "BioPath" "10" "1.74674907464443e-05" "1" "0.0325774992376407" "aging" "TAIR-GO" "10" "4.05468789087467e-11" "1" "0.00240145600291688" "lignin biosynthesis" "TAIR-GO" "10" "2.26933608139051e-09" "1" "0.00306977945002591" "response to stress" "TAIR-GO" "10" "2.41377496824494e-13" "1" "0.000526652889028794" "response to water deprivation" "TAIR-GO" "10" "0" "1" "0" "triacylglycerol degradation" "AraCyc" "10" "1.38326954946073e-14" "1" "0.00586343320864013" "biogenesis of cell wall" "FunCat" "10" "1.76672599289299e-07" "1" "0.0367181511437676" "Miscellaneous acyl lipid metabolism" "AcylLipid" "10" "0" "1" "0" "calcium ion binding" "TAIR-GO" "9" "1.85283064831519e-14" "1" "0.000872685460777355" "N-terminal protein myristoylation" "TAIR-GO" "9" "2.83977421934976e-08" "1" "0.00463602968233662" "response to absence of light" "TAIR-GO" "9" "1.99292029236029e-19" "1" "8.87987399926157e-05" "response to mechanical stimulus" "TAIR-GO" "9" "1.55306578382251e-15" "1" "0.000264856619182462" "response to temperature" "TAIR-GO" "9" "3.06699158924074e-13" "1" "0.000264856619182462" "thigmotropism" "TAIR-GO" "9" "5.08562073567914e-18" "1" "8.87987399926157e-05" "Phosphatidylinositol signaling system" "KEGG" "9" "1.32860434651090e-06" "1" "0.0259430588003636" "Signal Transduction" "KEGG" "9" "1.89560006577695e-06" "1" "0.0273897234421181" "Glutamate/glutamine from nitrogen fixation" "BioPath" "8" "2.22876514703595e-07" "1" "0.00289491848511681" "nitrate assimilation" "TAIR-GO" "8" "3.12328575428097e-12" "1" "0.000264856619182462" "response to ethylene stimulus" "TAIR-GO" "8" "4.37444612416869e-09" "2" "0.000261904004829474" "transcription factor binding" "TAIR-GO" "8" "0" "1" "0" "nitrate assimilation pathway" "AraCyc" "8" "9.24335192969610e-13" "1" "0.000201367624084003" "amino acid metabolism" "FunCat" "8" "0.00736220485346528" "1" "0.0859178428754613" "assimilation of ammonia, metabolism of the glutamate group" "FunCat" "8" "8.70282745114064e-08" "1" "0.00430932065996546" "nitrogen and sulfur metabolism" "FunCat" "8" "1.08820227876005e-07" "1" "0.00390976856129953" "Nitrogen metabolism" "KEGG" "8" "0.000166727602891911" "1" "0.0231482310179999" "indole phytoalexin biosynthesis" "TAIR-GO" "7" "0" "1" "0" "camalexin biosynthesis" "AraCyc" "7" "0" "1" "0" "Ascorbate and aldarate metabolism" "KEGG" "7" "5.33187276627119e-05" "1" "0.0144579317217481" "Fluorene degradation" "KEGG" "7" "1.48464478497977e-06" "1" "0.00529872409765921" "gamma-Hexachlorocyclohexane degradation" "KEGG" "7" "4.45241771754675e-06" "1" "0.00680009476721487" "camalexin biosynthesis" "LitPath" "7" "0" "1" "0" "STRESS DATA SET" "quantDE" "2.731885" "maxDE" "6.42059" "STRESS DATA SET" "Biosynthesis of Amino Acids and Derivatives" "BioPath" "12" "5.75089786296907e-09" "2" "0.00418661548422612" "Glutathione metabolism" "BioPath" "12" "7.42211146072136e-14" "2" "0.00031891972158228" "sulfate assimilation" "TAIR-GO" "10" "5.22769783614755e-21" "1" "4.35314577832234e-05" "dissimilatory sulfate reduction" "AraCyc" "10" "9.34355431408967e-19" "1" "9.43020545136589e-05" "sulfate assimilation III" "AraCyc" "10" "2.77891056663287e-12" "1" "0.00229993389347426" "biogenesis of chloroplast" "FunCat" "10" "7.12483351867099e-11" "1" "0.00743220871338605" "nitrogen and sulfur utilization " "FunCat" "10" "2.36010474157643e-18" "1" "0.000235704837926446" "Purine metabolism" "KEGG" "10" "1.58627800018858e-09" "1" "0.0215633024674319" "Selenoamino acid metabolism" "KEGG" "10" "1.89437706396662e-11" "1" "0.00566459007352507" "Sulfur metabolism" "KEGG" "10" "2.77260099289668e-12" "1" "0.00306211925396679" "nucleotide metabolism" "TAIR-GO" "9" "1.57360975734967e-24" "1" "4.67202903903819e-06" "de novo biosynthesis of purine nucleotides I" "AraCyc" "9" "1.51985285564369e-09" "1" "0.015295714133411" "HORMONE DATA SET" "quantDE" "1.222007" "maxDE" "3.3624468" "HORMONE DATA SET" "Miscellaneous acyl lipid metabolism" "AcylLipid" "12" "1.43921601728957e-08" "2" "0.0191900385707067" "Gluconeogenesis from lipids in seeds" "BioPath" "10" "2.53194941415569e-13" "1" "0.00616348582948504" "fatty acid biosynthesis" "TAIR-GO" "10" "1.83083467732420e-10" "1" "0.00236827965564834" "fatty acid oxidation pathway" "AraCyc" "10" "4.19126709846372e-16" "1" "0.000212731497484275" "octane oxidation" "AraCyc" "10" "8.94339923334778e-18" "1" "5.62354754182601e-05" "degradation " "FunCat" "10" "3.65442100165905e-14" "1" "0.00232551520892202" "degradation of lipids, fatty acids and isoprenoids" "FunCat" "10" "0" "1" "0" "Carbon fixation" "KEGG" "10" "5.52876177159753e-07" "2" "0.00476710088047149" "Fatty acid metabolism" "KEGG" "10" "1.14297223011292e-08" "1" "0.0140150795734361" "auxin mediated signaling pathway" "TAIR-GO" "9" "1.07022368466718e-16" "1" "6.99136057780236e-05" "calcium ion binding" "TAIR-GO" "9" "3.78212804180073e-17" "1" "0.000231779371209205" "Mo-molybdopterin cofactor biosynthesis" "TAIR-GO" "9" "2.73832664287053e-19" "1" "2.33680894717409e-05" "molybdenum ion binding" "TAIR-GO" "9" "0" "1" "0" "response to absence of light" "TAIR-GO" "9" "3.8533208918692e-22" "1" "2.33680894717409e-05" "response to mechanical stimulus" "TAIR-GO" "9" "3.11343875381891e-18" "1" "6.99136057780236e-05" "response to temperature" "TAIR-GO" "9" "6.43257434084858e-16" "1" "6.99136057780236e-05" "thigmotropism" "TAIR-GO" "9" "9.92238700849037e-21" "1" "2.33680894717409e-05" "biosynthesis of vitamins, cofactors, and prosthetic groups" "FunCat" "9" "2.63589883427345e-14" "1" "0.000662979680318877" "Folate biosynthesis" "KEGG" "9" "1.96282648297745e-12" "1" "0.00317816230444425" "Phosphatidylinositol signaling system" "KEGG" "9" "6.26464996707642e-09" "1" "0.0140150795734361" "Signal Transduction" "KEGG" "9" "9.13334828898128e-09" "1" "0.0148164366040025" "MUTANT DATA SET" "quantDE" "2.222232" "maxDE" "4.778451896" "HORMONE DATA SET" "Benzoate degradation via CoA ligation" "KEGG" "37" "1.7403157399859e-25" "8" "6.24641821452433e-07" "Inositol phosphate metabolism" "KEGG" "37" "6.14968653269950e-24" "8" "1.30988757286008e-06" "Nicotinate and nicotinamide metabolism" "KEGG" "37" "9.32523668739762e-28" "8" "3.06078867234432e-07" "Phenylpropanoid Metabolism" "BioPath" "32" "9.47651387302752e-08" "5" "0.0092576627312917" "Miscellaneous acyl lipid metabolism" "AcylLipid" "24" "4.68437770716463e-11" "5" "0.00191419838902740" "Biosynthesis of Amino Acids and Derivatives" "BioPath" "22" "0.00350979174763758" "3" "0.103719473163701" "Aromatic amino acid (Phe, Tyr, Trp) metabolism" "BioPath" "20" "5.51989750223544e-10" "3" "0.00267641926413192" "Phenylpropanoid pathway" "LitPath" "20" "1.74242242630423e-06" "4" "0.00495327709341021" "N-terminal protein myristoylation" "TAIR-GO" "18" "6.12731157588997e-19" "2" "0.000218310914968682" "degradation " "FunCat" "18" "2.31976756652200e-16" "2" "0.00180394121040046" "tryptophan biosynthesis" "AraCyc" "16" "4.3830212803079e-14" "3" "5.74078400771382e-05" "Glutamate metabolism" "KEGG" "16" "5.30977098950779e-08" "2" "0.0136989276929397" "tryptophan biosynthesis" "TAIR-GO" "14" "1.03831284995673e-10" "2" "0.000859222841668324" "Shikimate pathway" "LitPath" "14" "3.66748404222239e-05" "2" "0.0224900740498636" "Trp biosyntesis" "LitPath" "14" "1.50178380792937e-09" "2" "0.00190565916998297" "Glutathione metabolism" "BioPath" "12" "0.00186677507028873" "2" "0.0379957471493281" "nucleotide metabolism" "FunCat" "12" "0" "2" "0" "trehalose biosynthesis I" "AraCyc" "11" "0.000102891559609867" "2" "0.0259809667398752" "trehalose biosynthesis II" "AraCyc" "11" "3.90088516530518e-06" "2" "0.0104067292490775" "trehalose biosynthesis III" "AraCyc" "11" "1.77028710860810e-08" "2" "0.00236403380903786" "energy" "FunCat" "11" "1.56399358217502e-19" "2" "8.05940862449545e-07" "metabolism of energy reserves (e.g. glycogen, trehalose)" "FunCat" "11" "0" "2" "0" "Chlorophyll biosynthesis and breakdown" "BioPath" "10" "0.000518489830592785" "1" "0.0494614397923621" "Flavonoid and anthocyanin metabolism" "BioPath" "10" "3.60391686074538e-05" "1" "0.120202498756632" "Gluconeogenesis from lipids in seeds" "BioPath" "10" "0.0080711860991882" "1" "0.169319905239740" "Methionin/SAM/ethylene metabolism from cysteine and aspartate" "BioPath" "10" "2.47376433151599e-05" "1" "0.0415763417451261" "fatty acid biosynthesis" "TAIR-GO" "10" "4.53985661434241e-07" "1" "0.0125718032803259" "glutathione biosynthesis" "TAIR-GO" "10" "1.39716778131262e-16" "1" "0.000131380591918899" "phenylpropanoid metabolism" "TAIR-GO" "10" "1.52300818248943e-10" "1" "0.00191507432824642" "biosynthesis of proto- and siroheme" "AraCyc" "10" "6.47675541654419e-06" "1" "0.0469246675559126" "fatty acid oxidation pathway" "AraCyc" "10" "1.11107828237957e-07" "1" "0.0109921879179482" "glucosinolate biosynthesis from phenylalanine" "AraCyc" "10" "1.2017515842353e-13" "1" "0.000417830386197212" "glutathione biosynthesis" "AraCyc" "10" "1.03664707197717e-17" "1" "7.03887113069114e-05" "octane oxidation" "AraCyc" "10" "3.17084023201807e-09" "1" "0.00303477041679845" "aerobic respiration" "FunCat" "10" "9.3886208914013e-08" "1" "0.00870590307892927" "biogenesis of chloroplast" "FunCat" "10" "0.00850133182690967" "1" "0.115690347268352" "biosynthesis of vitamins, cofactors, and prosthetic groups" "FunCat" "10" "2.92043194419502e-09" "1" "0.00759033033109712" "degradation of lipids, fatty acids and isoprenoids" "FunCat" "10" "0" "1" "0" "respiration" "FunCat" "10" "9.3886208914013e-08" "1" "0.00870590307892927" "secondary metabolism" "FunCat" "10" "0.000294768847238026" "1" "0.112549955939094" "Carbon fixation" "KEGG" "10" "0.00372195028605597" "2" "0.0405187066637318" "Fatty acid metabolism" "KEGG" "10" "0.000164204617869812" "1" "0.0603372062429491" "Glutathione metabolism" "KEGG" "10" "0.000147244530875195" "1" "0.0873130714587768" "Phenylalanine, tyrosine and tryptophan biosynthesis" "KEGG" "10" "0.000446460482992464" "1" "0.0909040053010127" "Porphyrin and chlorophyll metabolism" "KEGG" "10" "2.83662240100245e-05" "1" "0.0397580855745933" "chlorophyll and phytochromobilin metabolism" "LitPath" "10" "0.00668929277929296" "1" "0.0957629830508004" "Glucosinolate Metabolism" "LitPath" "10" "0.000282063299889621" "1" "0.0351225640874845" "phytochromobilin biosynthesis" "LitPath" "10" "6.5924263884402e-09" "1" "0.00479935075883798" "calcium ion binding" "TAIR-GO" "9" "7.67160980451203e-14" "1" "0.00128588208132578" "phosphorylation" "TAIR-GO" "9" "0" "1" "0" "protein amino acid phosphorylation" "TAIR-GO" "9" "1.03482438778096e-10" "1" "0.00128588208132578" "response to absence of light" "TAIR-GO" "9" "8.40259668175804e-19" "1" "0.000131380591918899" "response to mechanical stimulus" "TAIR-GO" "9" "6.46939652092882e-15" "1" "0.000391327913002698" "response to temperature" "TAIR-GO" "9" "1.25843510665771e-12" "1" "0.000391327913002698" "thigmotropism" "TAIR-GO" "9" "2.13773920599357e-17" "1" "0.000131380591918899" "trehalose biosynthesis" "TAIR-GO" "9" "3.09790392914942e-15" "1" "0.000131380591918899" "lipases pathway" "AraCyc" "9" "1.17686418137904e-06" "2" "0.00128320357343818" "Phosphatidylinositol signaling system" "KEGG" "9" "4.96236491794551e-05" "1" "0.0603372062429491" "Signal Transduction" "KEGG" "9" "6.90287888642122e-05" "1" "0.0635237927818047" "cellulose biosynthesis" "BioPath" "8" "0.003714599005657" "1" "0.0856137166370773" "hemicellulose biosynthesis" "BioPath" "8" "9.4755256381761e-06" "1" "0.0126029234860376" "Phytic acid biosynthesis" "BioPath" "8" "1.44781269216232e-05" "1" "0.0253454057409109" "abscisic acid mediated signaling" "TAIR-GO" "8" "3.44441982930961e-10" "1" "0.000777071169825264" "response to cold" "TAIR-GO" "8" "2.11311123298311e-08" "1" "0.00266200300890358" "response to salt stress" "TAIR-GO" "8" "7.36676618943757e-11" "1" "0.000777071169825264" "response to water deprivation" "TAIR-GO" "8" "0" "1" "0" "lignin biosynthesis" "AraCyc" "8" "0.000864248673908195" "2" "0.00588775922858177" "biogenesis of cell wall" "FunCat" "8" "0.00763119162700956" "1" "0.125247210845789" "lipid, fatty acid and isoprenoid degradation" "FunCat" "8" "3.19417510605296e-05" "1" "0.0270959754925245" "stress response" "FunCat" "8" "0" "1" "0"