"Pathway"	"Pathway.source"	"Annotation.score"	"p.value.score"	"No.of.genes"	"p.value.genes"
"IN ALL DATA SETS"		"sum.of.scores"	"sum.of.genes"		
"gamma-Hexachlorocyclohexane degradation"	"KEGG"	60	6		
"Fluorene degradation"	"KEGG"	50	7		
"Ascorbate and aldarate metabolism"	"KEGG"	49	5		
"Prostaglandin and leukotriene metabolism"	"KEGG"	49	5		
"Phenylalanine metabolism"	"KEGG"	49	5		
"Methane metabolism"	"KEGG"	49	5		
"Glucosinolate Metabolism"	"LitPath"	42	5		
"Stilbene, coumarine and lignin biosynthesis"	"KEGG"	40	5		
"mono-/sesqui-/di-terpene biosynthesis"	"LitPath"	40	4		
"terpenoid metabolism"	"LitPath"	40	4		
"monoterpene biosynthesis"	"LitPath"	40	4		
"response to UV"	"TAIR-GO"	28	4		
"tryptophan catabolism"	"TAIR-GO"	28	4		
"chloroplast thylakoid membrane protein import"	"TAIR-GO"	28	4		
"monoterpenoid biosynthesis"	"TAIR-GO"	28	4		
"glucosinolate biosynthesis"	"TAIR-GO"	28	4		
"ORGAN DATA SET"	"quantDE"	3.800717	"maxDE"	5.3625187	"ORGAN DATA SET"
"STRESS DATA SET"	"quantDE"	1.89041	"maxDE"	3.932215	"STRESS DATA SET"
"HORMONE DATA SET"	"quantDE"	1.492225	"maxDE"	3.5182689	"HORMONE DATA SET"
"Glucosinolate Metabolism"	"LitPath"	30	8.60450232505818E-022	3	0.0000832496735718706
"Stilbene, coumarine and lignin biosynthesis"	"KEGG"	20	2.91109072408653E-017	4	0.0000842142786939968
"monoterpenoid biosynthesis"	"TAIR-GO"	19	4.53876774592298E-035	2	0.000000522717184178834
"mono-/sesqui-/di-terpene biosynthesis"	"LitPath"	19	0.0000000000843658228960263	2	0.00833164316646349
"monoterpene biosynthesis"	"LitPath"	19	1.30280120080509E-022	2	0.0000227441696390064
"terpenoid metabolism"	"LitPath"	19	0.0000000000936269950684077	2	0.00912085156492314
"Phenylpropanoid Metabolism"	"BioPath"	12	0.000140148601987041	2	0.0229244645010311
"Biosynthesis of Amino Acids and Derivatives"	"BioPath"	10	0.00275931302264713	2	0.0208482808334379
"Flavonoid and anthocyanin metabolism"	"BioPath"	10	0.000000000477988790240245	1	0.017083737775716
"Pathway for nuclear-encoded, thylakoid-localized proteins"	"BioPath"	10	0.000000000000238875657933059	1	0.000976625736676473
"SRP (signal recognition particle)-dependent pathway for integral membrane proteins"	"BioPath"	10	2.88196499445872E-016	1	0.000190480547314221
"chloroplast thylakoid membrane protein import"	"TAIR-GO"	10	2.1102563861316E-016	1	0.000170318950022957
"glucosinolate biosynthesis"	"TAIR-GO"	10	0.00000000000208521198482483	1	0.000785138855097489
"response to UV"	"TAIR-GO"	10	0.0000000000485664482453044	1	0.00215391761291406
"tryptophan catabolism"	"TAIR-GO"	10	4.51342171163583E-020	1	0.0000285609982432389
"glucosinolate biosynthesis from homomethionine"	"AraCyc"	10	2.41733742367461E-015	1	0.000130887247476106
"glucosinolate biosynthesis from phenylalanine"	"AraCyc"	10	1.56501078645668E-016	1	0.0000787032278354393
"glucosinolate biosynthesis from tryptophan"	"AraCyc"	10	3.86844946441931E-018	1	0.0000394372467589891
"IAA biosynthesis"	"AraCyc"	10	0.00000000000325019733538611	1	0.000850816328770191
"IAA biosynthesis I"	"AraCyc"	10	0.000000000000064674428753273	1	0.000467116064360344
"Ascorbate and aldarate metabolism"	"KEGG"	10	0.000000000715220355478196	1	0.00633300454787079
"Fluorene degradation"	"KEGG"	10	0.00000000000351710311926306	1	0.00228195354392207
"gamma-Hexachlorocyclohexane degradation"	"KEGG"	10	0.000000000017690899363552	1	0.00293852092825394
"Methane metabolism"	"KEGG"	10	0.00000000940608822564214	3	0.000531552302782149
"Phenylalanine metabolism"	"KEGG"	10	0.000000238283006092536	3	0.000698009432124381
"Prostaglandin and leukotriene metabolism"	"KEGG"	10	0.0000000000836186501889528	3	0.00022733571674069
"monoterpene biosynthesis"	"AraCyc"	9	2.86331174652699E-016	1	0.0000394372467589891
"plant monoterpene biosynthesis"	"AraCyc"	9	1.38152074783652E-018	1	0.0000131743577312401
"Lipid signaling"	"AcylLipid"	8	0.000199388079825462	2	0.0499101663881048
"MUTANT DATA SET"	"quantDE"	2.233848	"maxDE"	4.72596882	"HORMONE DATA SET"
"Glucosinolate Metabolism"	"LitPath"	30	2.13434888215738E-035	3	0.00000216840268927722
"Phenylpropanoid Metabolism"	"BioPath"	22	0.0000000869641243731883	3	0.013255632284812
"Biosynthesis of Amino Acids and Derivatives"	"BioPath"	18	0.000041027407402964	3	0.0117238788584356
"Branched-chain amino acids from aspartate"	"BioPath"	18	4.71373745054733E-019	3	0.00000782908349895103
"gamma-Hexachlorocyclohexane degradation"	"KEGG"	18	6.78770831428646E-019	3	0.00000410978787881808
"transport "	"FunCat"	15	2.86911443710707E-034	2	0.0000000722567669782351
"transport ATPases"	"FunCat"	15	3.04815196078943E-015	2	0.000331819293506372
"transport facilitation"	"FunCat"	15	0	2	0.0000000722567669782351
"leucine biosynthesis"	"AraCyc"	14	4.99625063667319E-020	2	0.0000347054332300154
"amino acid metabolism"	"FunCat"	14	0.0000184859649148214	2	0.0097908548594022
"core phenylpropanoid metabolism"	"BioPath"	12	0.0000000552829346342524	2	0.00180197726470083
"Phenylpropanoid pathway"	"LitPath"	12	0.0000342402920320563	2	0.0127706118662102
"Flavonoid and anthocyanin metabolism"	"BioPath"	10	0.0000000917808307563857	1	0.0373107493157161
"glucosinolate biosynthesis"	"TAIR-GO"	10	0.0000000000000511374683914353	1	0.000402165178405167
"leucine biosynthesis"	"TAIR-GO"	10	0	1	0
"lignin biosynthesis"	"TAIR-GO"	10	0.000000000000116970373204251	1	0.000516014011239383
"response to UV"	"TAIR-GO"	10	0.00000000000124104539896331	1	0.00110892641447936
"glucosinolate biosynthesis from homomethionine"	"AraCyc"	10	8.3280132930234E-015	1	0.000169359991897436
"glucosinolate biosynthesis from phenylalanine"	"AraCyc"	10	5.42311886630742E-016	1	0.00010187118286481
"lignin biosynthesis"	"AraCyc"	10	0.000000369715537286287	1	0.014532230929806
"phenylpropanoid biosynthesis"	"AraCyc"	10	2.07931297205154E-017	1	0.000253403697478748
"suberin biosynthesis"	"AraCyc"	10	0.000000000468373251400042	1	0.00250815540100966
"Ascorbate and aldarate metabolism"	"KEGG"	10	0.000000271396141406089	1	0.0125976511294601
"Flavonoid biosynthesis"	"KEGG"	10	0.000000000427457459077908	1	0.0052362571284855
"Fluorene degradation"	"KEGG"	10	0.0000000016705945827753	1	0.00460134449891998
"Pyruvate metabolism"	"KEGG"	10	0.00100782335983965	1	0.0880220797874007
"Stilbene, coumarine and lignin biosynthesis"	"KEGG"	10	0.000253877223140732	1	0.149322689560824
"Valine, leucine and isoleucine biosynthesis"	"KEGG"	10	0.000000344885936458775	1	0.0190343302310507
"nutrient import"	"TAIR-GO"	9	0	1	0
"eukaryotic plasma membrane / membrane attached "	"FunCat"	9	1.92326743106726E-019	1	0.0000561073795585996
"Oxidative phosphorylation"	"KEGG"	9	0.000190518119019462	1	0.0901241183058944
"additional photosystem II components"	"BioPath"	8	0.0000968408482149096	1	0.019613002867446
"Early light-inducible proteins"	"BioPath"	8	0.0000000000363977871400392	1	0.000617083393365233
"Photosystems "	"BioPath"	8	0.0409572328711161	1	0.118547502111839
"response to high light intensity"	"TAIR-GO"	8	1.24156980158007E-015	1	0.0000435314577832234
"biogenesis of chloroplast"	"FunCat"	8	0.000752433584029513	1	0.0294934587581762
"photosynthesis"	"FunCat"	8	0.000045271403977057	1	0.0159246596076505
"ATP synthesis"	"KEGG"	8	0.000056741587853561	2	0.00247820683977176
"Riboflavin metabolism"	"KEGG"	8	0.00000000000863622193743766	2	0.0000345815617425046