"Pathway" "Pathway.source" "V3" "V4" "V5" "V6" "IN TWO DATA SETS" "" "sum.of.scores" "sum.of.genes" "" "" "Biosynthesis of prenyl diphosphates" "BioPath" "20" "2" "" "" "Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone)" "BioPath" "20" "2" "" "" "prenyl diphosphate (GPP,FPP, GGPP) biosynthesis" "LitPath" "20" "2" "" "" "ORGAN DATA SET" "quantDE" "0" "maxDE" "6.363343" "ORGAN DATA SET" "Cell Wall Carbohydrate Metabolism" "BioPath" "22.5" "6.29711431950914e-05" "5" "0.0247008810337418" "gibberellin biosynthesis" "AraCyc" "13" "4.16128052540246e-19" "2" "2.29825317658967e-05" "cellulose biosynthesis" "BioPath" "12" "7.82923777981422e-09" "2" "0.00365955081883550" "nucleotide metabolism" "FunCat" "12" "0" "2" "0" "purine nucleotide metabolism" "FunCat" "12" "1.23961307176637e-12" "2" "0.000621166399151469" "Phosphatidylinositol signaling system" "KEGG" "11" "4.78913778541333e-10" "2" "0.00253991947448799" "Signal Transduction" "KEGG" "11" "7.52416184808907e-10" "2" "0.00276259143833030" "pectin metabolism" "BioPath" "10.5" "0.000104667774775051" "3" "0.0191386218586219" "Biosynthesis of prenyl diphosphates" "BioPath" "10" "7.62491967754579e-06" "1" "0.0384758413143651" "Methionin/SAM/ethylene metabolism from cysteine and aspartate" "BioPath" "10" "4.45070996941834e-08" "2" "0.00112082326287213" "Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone)" "BioPath" "10" "0.00326077919528611" "1" "0.117445967074722" "prenyl diphosphate (GPP,FPP, GGPP) biosynthesis" "LitPath" "10" "5.85593702543584e-09" "1" "0.0223476892880649" "gibberellic acid biosynthesis" "TAIR-GO" "9" "1.25109791527891e-14" "1" "0.000423195781294186" "hemicellulose biosynthesis" "BioPath" "8" "4.39275192436186e-08" "1" "0.00549805617465149" "secondary metabolism" "FunCat" "8" "7.60831679520622e-05" "2" "0.0128818330852131" "Fructose and mannose metabolism" "KEGG" "8" "2.20053761487845e-05" "1" "0.0541399608019284" "Glycan Biosynthesis and Metabolism" "KEGG" "8" "7.26036631495516e-05" "1" "0.0937977812750702" "Glycerolipid metabolism" "KEGG" "8" "4.09071399466304e-06" "1" "0.0294980718969973" "Methane metabolism" "KEGG" "8" "4.41923400303344e-06" "4" "0.000446262086640626" "Phenylalanine metabolism" "KEGG" "8" "5.45929313909715e-05" "4" "0.00062147409966805" "Prostaglandin and leukotriene metabolism" "KEGG" "8" "1.06667404583282e-07" "4" "0.000157908962071578" "Stilbene, coumarine and lignin biosynthesis" "KEGG" "8" "0.000194008645727440" "4" "0.00112176604730209" "Lipid signaling" "AcylLipid" "8" "1.43377809346431e-05" "2" "0.0152941731243811" "mono-/sesqui-/di-terpene biosynthesis" "LitPath" "8" "2.45939597561355e-05" "2" "0.0111027201888577" "terpenoid metabolism" "LitPath" "8" "2.57305290131683e-05" "2" "0.0121408418490139" "calcium-mediated signaling" "TAIR-GO" "7" "1.25372552649710e-17" "1" "2.33363123655411e-05" "cell growth / morphogenesis " "FunCat" "7" "1.4076178896268e-11" "1" "0.000659400090112875" "cytoskeleton" "FunCat" "7" "0" "1" "0" "directional cell growth (morphogenesis)" "FunCat" "7" "8.25922078339758e-16" "1" "0.000199867378659439" "intracellular signalling" "FunCat" "7" "0.000100761311144100" "1" "0.0759160195094562" "STRESS DATA SET" "quantDE" "1.896775" "maxDE" "6.0374" "STRESS DATA SET" "HORMONE DATA SET" "quantDE" "0" "maxDE" "2.0630992" "HORMONE DATA SET" "MUTANT DATA SET" "quantDE" "0" "maxDE" "0.403481855" "MUTANT DATA SET" "Biosynthesis of prenyl diphosphates" "BioPath" "10" "3.58645500009556e-14" "1" "0.000269114987201392" "Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone)" "BioPath" "10" "7.42057999541815e-11" "1" "0.000968074314425303" "prenyl diphosphate (GPP,FPP, GGPP) biosynthesis" "LitPath" "10" "0" "1" "0"