"Pathway" "Pathway.source" "Annotation.score" "p.value.score" "No.of.genes" "p.value.genes" "IN ALL DATA SETS" "" "sum.of.scores" "sum.of.genes" "" "" "ORGAN DATA SET" "quantDE" "4.757967" "maxDE" "6.4189814" "ORGAN DATA SET" "mono-/sesqui-/di-terpene biosynthesis" "LitPath" "29" "3.0689505069092e-15" "3" "0.0146182958805170" "terpenoid metabolism" "LitPath" "29" "3.60242295897874e-15" "3" "0.0163480830325236" "Stilbene, coumarine and lignin biosynthesis" "KEGG" "22" "2.00811374884679e-19" "7" "6.40934420210708e-07" "monoterpenoid biosynthesis" "TAIR-GO" "19" "5.67677558970117e-41" "2" "1.11049637202100e-07" "monoterpene biosynthesis" "LitPath" "19" "1.70561952816704e-18" "2" "0.000284106234285798" "detoxification" "FunCat" "13" "0" "3" "0" "Methane metabolism" "KEGG" "12" "7.18843216056857e-11" "6" "2.28487714783726e-06" "Phenylalanine metabolism" "KEGG" "12" "3.50779001089891e-09" "6" "3.71555006112283e-06" "Prostaglandin and leukotriene metabolism" "KEGG" "12" "2.48431630843524e-13" "6" "4.99294777930181e-07" "detoxification involving cytochrome P450 " "FunCat" "11" "1.25826367035009e-20" "2" "4.79804399771081e-05" "Flavonoid and anthocyanin metabolism" "BioPath" "10" "1.76449140790650e-16" "3" "2.41174216037849e-06" "Phenylpropanoid Metabolism" "BioPath" "10" "5.51269011412817e-09" "3" "0.000231441510859401" "fatty acid metabolism" "TAIR-GO" "10" "2.8653105098423e-11" "1" "0.00314576475074543" "Ascorbate and aldarate metabolism" "KEGG" "10" "9.9963803976934e-10" "1" "0.0164298265335962" "Fluorene degradation" "KEGG" "10" "4.96138217650368e-12" "1" "0.00604179842698011" "gamma-Hexachlorocyclohexane degradation" "KEGG" "10" "2.48979393220676e-11" "1" "0.00774845287533295" "Fatty acid elongation and wax and cutin metabolism" "AcylLipid" "10" "3.65516608724851e-05" "1" "0.187404503788746" "fatty acid modulation" "LitPath" "10" "1.94925093890073e-12" "1" "0.00100355806951920" "sequiterpene biosynthesis" "LitPath" "10" "1.94925093890073e-12" "1" "0.00100355806951920" "auxin biosynthesis" "TAIR-GO" "9" "2.9917077076627e-18" "1" "6.5208381011973e-05" "IAA biosynthesis" "AraCyc" "9" "6.93182007258517e-13" "1" "0.00137638308807434" "monoterpene biosynthesis" "AraCyc" "9" "2.03500997658334e-18" "1" "6.41833657610817e-05" "plant monoterpene biosynthesis" "AraCyc" "9" "9.63639375929125e-21" "1" "2.14553825908767e-05" "flavonol biosynthesis" "AraCyc" "8" "2.96449897629649e-12" "2" "9.8985295104736e-05" "secondary metabolism" "FunCat" "8" "5.79711003497711e-06" "4" "2.77821262097367e-05" "storage protein" "FunCat" "8" "2.69688068404268e-16" "2" "2.24448762699013e-06" "flavonoid, anthocyanin, and proanthocyanidin biosynthesis" "LitPath" "8" "0.00181005401548610" "2" "0.00412591453321598" "proanthocyanidin biosynthesis" "LitPath" "8" "0.00181005401548610" "2" "0.00412591453321598" "pentacyclic triterpenoid biosynthesis" "TAIR-GO" "7" "5.42444613561328e-11" "1" "0.00030224077631844" "isoprenoid biosynthesis " "FunCat" "7" "0.000400054032641694" "1" "0.0571466154323865" "lipid, fatty acid and isoprenoid biosynthesis " "FunCat" "7" "0.000162393537213304" "1" "0.0443617865791268" "Biosynthesis of steroids" "KEGG" "7" "0.00048159934119992" "1" "0.0511328785279001" "triterpene biosynthesis" "LitPath" "7" "0.00107936164041336" "1" "0.0385479292183677" "STRESS DATA SET" "quantDE" "2.357154" "maxDE" "7.170031" "STRESS DATA SET" "brassinosteroid biosynthesis" "BioPath" "10" "2.72098439755343e-26" "1" "8.53430191970587e-07" "Isoprenoid Biosynthesis in the Cytosol and in Mitochondria" "BioPath" "10" "1.92791178292096e-12" "1" "0.000555583054972853" "brassinosteroid biosynthesis" "TAIR-GO" "10" "1.35345289337736e-16" "1" "0.000102470045507461" "response to light" "TAIR-GO" "10" "6.67280039976249e-14" "1" "0.00102519776678664" "steroid biosynthesis" "TAIR-GO" "10" "1.35345289337736e-16" "1" "0.000102470045507461" "brassinosteroid biosynthesis I" "AraCyc" "10" "3.46247652723130e-18" "1" "7.13029043089438e-05" "brassinosteroid biosynthesis II" "AraCyc" "10" "2.69923916722592e-21" "1" "2.48015760829959e-05" "brassinosteroid biosynthesis III" "AraCyc" "10" "5.97397939579467e-28" "1" "3.76221591365692e-06" "1- and 2-Methylnaphthalene degradation" "KEGG" "10" "7.96964929494154e-24" "1" "8.71197651251133e-06" "Bile acid biosynthesis" "KEGG" "10" "4.63892565705201e-21" "1" "1.58399572954751e-05" "triterpene, sterol, and brassinosteroid metabolism" "LitPath" "10" "0" "1" "0" "HORMONE DATA SET" "quantDE" "4.557468" "maxDE" "9.2242657" "HORMONE DATA SET" "Phenylpropanoid Metabolism" "BioPath" "28" "3.35345099179038e-08" "4" "0.0094001329664592" "Lipid signaling" "AcylLipid" "18" "1.19052692696468e-06" "3" "0.0151090608609387" "Biosynthesis of Amino Acids and Derivatives" "BioPath" "16" "0.0171346144404718" "2" "0.140207296545131" "Glutathione metabolism" "BioPath" "16" "4.33793016777201e-07" "2" "0.0160276989560066" "cysteine biosynthesis I" "AraCyc" "16" "1.13049545144377e-14" "2" "0.00170808946713936" "sulfate assimilation III" "AraCyc" "16" "4.82983236440231e-13" "2" "0.00104533360294790" "amino acid metabolism" "FunCat" "16" "7.45586427201222e-06" "2" "0.0476132709753613" "Cysteine metabolism" "KEGG" "16" "7.03756640852943e-16" "2" "0.000313653885066024" "Sulfur metabolism" "KEGG" "16" "7.7736216240515e-16" "2" "0.000167869574984116" "Phenylpropanoid pathway" "LitPath" "16" "0.00430150896143008" "4" "0.0161587513001781" "anthocyanin biosynthesis" "AraCyc" "14" "6.80502502983486e-21" "2" "3.46256507936765e-05" "Flavonoid biosynthesis" "KEGG" "14" "1.5231389175655e-17" "2" "6.22575403909266e-05" "core phenylpropanoid metabolism" "BioPath" "12" "3.36234567746713e-06" "2" "0.00490519025745788" "lignin biosynthesis" "AraCyc" "12" "2.0032135972528e-08" "2" "0.00242472145091349" "Stilbene, coumarine and lignin biosynthesis" "KEGG" "12" "3.1526444221772e-07" "2" "0.0132829751150422" "Chlorophyll biosynthesis and breakdown" "BioPath" "10" "5.528589685368e-05" "1" "0.0272090548384422" "Flavonoid and anthocyanin metabolism" "BioPath" "10" "3.22061442364440e-06" "1" "0.0689733525517535" "Isoprenoid Biosynthesis in the Cytosol and in Mitochondria" "BioPath" "10" "0.00480424129249763" "2" "0.0125245346557264" "Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone)" "BioPath" "10" "0.0460973324547521" "1" "0.138658795119391" "sterol biosynthesis" "BioPath" "10" "4.4865302455595e-06" "2" "0.000990231761509041" "anthocyanin biosynthesis " "TAIR-GO" "10" "0" "1" "0" "chlorophyll catabolism" "TAIR-GO" "10" "3.9224040750212e-18" "1" "6.99136057780236e-05" "cysteine biosynthesis" "TAIR-GO" "10" "3.9224040750212e-18" "1" "6.99136057780236e-05" "lignin biosynthesis" "TAIR-GO" "10" "1.37200187171156e-12" "1" "0.000825363732292112" "phenylpropanoid biosynthesis" "TAIR-GO" "10" "2.45567626929284e-15" "1" "0.000231779371209205" "response to stress" "TAIR-GO" "10" "1.15663655661740e-16" "1" "0.000139446907688634" "tryptophan catabolism" "TAIR-GO" "10" "1.26035024857080e-20" "1" "2.33680894717410e-05" "glucosinolate biosynthesis from tryptophan" "AraCyc" "10" "5.84969185852631e-17" "1" "0.000112489218355944" "IAA biosynthesis" "AraCyc" "10" "4.51190252930299e-11" "1" "0.00239061728136909" "IAA biosynthesis I" "AraCyc" "10" "9.31309491476387e-13" "1" "0.00131908252550885" "lipoxygenase pathway" "AraCyc" "10" "8.36889123978004e-12" "1" "0.00239061728136909" "biogenesis of cell wall" "FunCat" "10" "6.33417460588150e-06" "1" "0.0921104686757759" "biosynthesis of phenylpropanoids" "FunCat" "10" "5.98481949746947e-08" "1" "0.0296397590152479" "biosynthesis of secondary products derived from L-phenylalanine and L-tyrosine" "FunCat" "10" "5.98481949746947e-08" "1" "0.0296397590152479" "lipid, fatty acid and isoprenoid metabolism" "FunCat" "10" "2.10596579607920e-06" "1" "0.0418725481177116" "Ascorbate and aldarate metabolism" "KEGG" "10" "9.37251675748163e-09" "1" "0.00700908750483925" "Fluorene degradation" "KEGG" "10" "4.99317146103775e-11" "1" "0.00252986498628408" "gamma-Hexachlorocyclohexane degradation" "KEGG" "10" "2.4617379179287e-10" "1" "0.00325665095274107" "Selenoamino acid metabolism" "KEGG" "10" "7.87292423159593e-08" "1" "0.0100081980786757" "anthocyanin biosynthesis" "LitPath" "10" "0" "1" "0" "chlorophyll and phytochromobilin metabolism" "LitPath" "10" "0.0331747297760371" "1" "0.144786621585702" "chlorophyll catabolism" "LitPath" "10" "1.02747859728573e-11" "1" "0.00117200812818699" "flavonoid, anthocyanin, and proanthocyanidin biosynthesis" "LitPath" "10" "3.35376013620059e-06" "1" "0.0195410929762410" "Glucosinolate Metabolism" "LitPath" "10" "0.00199058801316956" "1" "0.0552730646654216" "oxylipin pathway" "LitPath" "10" "3.7729700085495e-14" "1" "0.000395341057689384" "proanthocyanidin biosynthesis" "LitPath" "10" "3.35376013620059e-06" "1" "0.0195410929762410" "Leaf Glycerolipid Biosynthesis in cytosol / ER" "BioPath" "9" "1.28416323411547e-05" "1" "0.0227379091980599" "Synthesis of membrane lipids in endomembrane system" "AcylLipid" "9" "0.000793133390521838" "1" "0.076843056761444" "storage protein" "FunCat" "8" "7.37464362149695e-15" "2" "4.51740609764392e-06" "MUTANT DATA SET" "quantDE" "4.109991" "maxDE" "13.632546622" "MUTANT DATA SET" "Biosynthesis of steroids" "KEGG" "19" "7.37331951732061e-24" "4" "1.37318615651521e-07" "secondary metabolism" "FunCat" "15" "3.93632952684562e-19" "4" "3.92092680283238e-06" "Phenylpropanoid Metabolism" "BioPath" "13" "0.00534462900342923" "3" "0.0574369194743004" "lignin biosynthesis" "AraCyc" "12" "3.17935957052372e-14" "2" "0.000762372715163199" "Phenylpropanoid pathway" "LitPath" "12" "0.00221555850792302" "2" "0.184517833926432" "triterpene, sterol, and brassinosteroid metabolism" "LitPath" "11" "0.00603023926450131" "2" "0.128134518143979" "cellulose biosynthesis" "BioPath" "10" "8.58954889771066e-07" "1" "0.0568483680860616" "core phenylpropanoid metabolism" "BioPath" "10" "3.18387020281968e-06" "1" "0.0568483680860616" "hemicellulose biosynthesis" "BioPath" "10" "2.01453120172079e-10" "1" "0.00802090268864798" "lignin biosynthesis" "TAIR-GO" "10" "1.84660531128540e-16" "1" "0.00038793407430089" "Biosynthesis of prenyl diphosphates" "BioPath" "8" "0.000305604157941288" "2" "0.00598725632826788" "Leaf Glycerolipid Biosynthesis in Plastid" "BioPath" "8" "0.00119853912774082" "2" "0.0122905652667255" "Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone)" "BioPath" "8" "0.0298946882182298" "2" "0.0333322772806861" "Terpenoid biosynthesis" "KEGG" "8" "2.60764197542490e-11" "2" "3.33606039226838e-05" "Synthesis of fatty acids in plastids" "AcylLipid" "8" "0" "2" "0" "prenyl diphosphate (GPP,FPP, GGPP) biosynthesis" "LitPath" "8" "2.87410797384078e-05" "2" "0.00219059295376052" "pentacyclic triterpenoid biosynthesis" "TAIR-GO" "7" "4.8508708501163e-12" "1" "0.00030224077631844" "triterpene biosynthesis" "LitPath" "7" "3.27789792363268e-06" "1" "0.0139776821021290"