"Pathway"	"Pathway.source"	"V3"	"V4"	"V5"	"V6"
"IN THREE DATA SETS"	""	"sum.of.scores"	"sum.of.genes"	""	""
"Synthesis and storage of oil"	"AcylLipid"	"74"	"20"	""	""
"secondary metabolism"	"FunCat"	"51"	"7"	""	""
"secondary metabolism"	"FunCat"	"51"	"7"	""	""
"gibberellic acid biosynthesis"	"TAIR-GO"	"50"	"5"	""	""
"Diterpenoid biosynthesis"	"KEGG"	"50"	"5"	""	""
"Gibberellin metabolism"	"LitPath"	"50"	"5"	""	""
"giberelin biosynthesis"	"LitPath"	"50"	"5"	""	""
"gibberellin biosynthesis"	"AraCyc"	"42"	"5"	""	""
"plant / fungal specific systemic sensing and response "	"FunCat"	"40"	"4"	""	""
"plant hormonal regulation"	"FunCat"	"40"	"4"	""	""
"Carbon fixation"	"KEGG"	"28"	"6"	""	""
"transport "	"FunCat"	"25"	"6"	""	""
"ORGAN DATA SET"	"quantDE"	"5.13924"	"maxDE"	"7.6113336"	"ORGAN DATA SET"
"Synthesis and storage of oil"	"AcylLipid"	"38"	"1.94306756091651e-42"	"10"	"8.38894824894634e-12"
"TCA cycle variation VII"	"AraCyc"	"28"	"1.11939398535448e-08"	"5"	"0.0124618237059416"
"glycolysis and gluconeogenesis"	"FunCat"	"28"	"7.91115541416959e-06"	"6"	"0.0118235556145163"
"glyoxylate cycle"	"AraCyc"	"26"	"1.11290920308648e-16"	"4"	"0.000342055404694551"
"TCA cycle variation VIII"	"AraCyc"	"26"	"6.35195843712204e-11"	"4"	"0.0109236013838631"
"Glyoxylate and dicarboxylate metabolism"	"KEGG"	"26"	"7.67281091522536e-20"	"4"	"0.000115983519359198"
"Pyruvate metabolism"	"KEGG"	"26"	"7.37538655551662e-10"	"4"	"0.0089611587183216"
"Biosynthesis of Amino Acids and Derivatives"	"BioPath"	"24"	"0.000251741116110104"	"3"	"0.211431288269208"
"Phenylpropanoid pathway"	"LitPath"	"24"	"2.62881751090202e-06"	"6"	"0.00351337480986620"
"Intermediary Carbon Metabolism"	"BioPath"	"22"	"6.09114463472339e-05"	"4"	"0.0704979219549642"
"gibberellic acid biosynthesis"	"TAIR-GO"	"20"	"1.67747889092260e-22"	"2"	"0.000120927623792485"
"amino acid metabolism"	"FunCat"	"20"	"0.024449556200812"	"2"	"0.382708020412936"
"plant / fungal specific systemic sensing and response "	"FunCat"	"20"	"2.45163009493013e-14"	"2"	"0.00719722871807876"
"plant hormonal regulation"	"FunCat"	"20"	"2.45163009493013e-14"	"2"	"0.00719722871807876"
"Diterpenoid biosynthesis"	"KEGG"	"20"	"4.18278781769686e-16"	"2"	"0.00109063287258147"
"Gibberellin metabolism"	"LitPath"	"20"	"1.45733847816221e-12"	"2"	"0.00987281384012014"
"giberelin biosynthesis"	"LitPath"	"20"	"8.27873638434733e-16"	"2"	"0.00446051419677797"
"acyl-CoA binding"	"TAIR-GO"	"19"	"0"	"2"	"0"
"lipid transport"	"TAIR-GO"	"19"	"4.10587459145354e-28"	"2"	"2.62892237046237e-05"
"serine-isocitrate lyase pathway"	"AraCyc"	"18"	"5.20863066501345e-06"	"4"	"0.00764020796369485"
"Gluconeogenesis from lipids in seeds"	"BioPath"	"17"	"4.50315912485142e-07"	"3"	"0.0151445484954391"
"core phenylpropanoid metabolism"	"BioPath"	"14"	"1.00298813822765e-06"	"2"	"0.0254610196286332"
"TCA cycle -- aerobic respiration"	"AraCyc"	"14"	"0.000423071481349602"	"3"	"0.0403578389207837"
"Citrate cycle (TCA cycle)"	"KEGG"	"14"	"3.99345941713074e-06"	"3"	"0.00588063486351543"
"acetyl-CoA assimilation"	"AraCyc"	"12"	"0.000412576843299921"	"2"	"0.0578513141018586"
"lignin biosynthesis"	"AraCyc"	"12"	"0.00909974359433401"	"2"	"0.122138096997648"
"TCA cycle variation IV"	"AraCyc"	"12"	"0.00292731480447374"	"2"	"0.128351173282959"
"secondary metabolism"	"FunCat"	"12"	"0.00153345800816368"	"2"	"0.137182611417478"
"Branched-chain amino acids from aspartate"	"BioPath"	"10"	"1.73407841149185e-06"	"1"	"0.0487680254603871"
"Glutamate/glutamine from nitrogen fixation"	"BioPath"	"10"	"4.9997026037397e-08"	"1"	"0.0141196563373863"
"gibberellic acid mediated signaling"	"TAIR-GO"	"10"	"1.55615790985849e-12"	"1"	"0.000872685460777355"
"lignin biosynthesis"	"TAIR-GO"	"10"	"7.54035377084141e-10"	"1"	"0.00306977945002591"
"microsome"	"TAIR-GO"	"10"	"0"	"1"	"0"
"oxygen binding"	"TAIR-GO"	"10"	"8.99419416198687e-18"	"1"	"8.87987399926157e-05"
"ammonia assimilation cycle"	"AraCyc"	"10"	"1.05754898638300e-06"	"1"	"0.0242677415116977"
"gibberellin biosynthesis"	"AraCyc"	"10"	"7.48161990377297e-06"	"1"	"0.0421452703518127"
"glutamine biosynthesis I"	"AraCyc"	"10"	"2.96615119457483e-07"	"1"	"0.0146796569597450"
"mixed acid fermentation"	"AraCyc"	"10"	"0.00254038018519537"	"2"	"0.0719559896278385"
"nitrate assimilation pathway"	"AraCyc"	"10"	"8.3913672944255e-06"	"1"	"0.0297907167434929"
"sucrose biosynthesis"	"AraCyc"	"10"	"8.61225332739817e-05"	"2"	"0.0168867514239167"
"threonine biosynthesis from homoserine"	"AraCyc"	"10"	"4.43647035896708e-10"	"1"	"0.00724997266130035"
"assimilation of ammonia, metabolism of the glutamate group"	"FunCat"	"10"	"0.000223603508043054"	"1"	"0.0735847106654426"
"biosynthesis of derivatives of homoisopentenyl pyrophosphate "	"FunCat"	"10"	"7.32286884742126e-06"	"1"	"0.0399370619269295"
"glyoxylate cycle"	"FunCat"	"10"	"2.20370236085537e-14"	"1"	"0.00134771654303951"
"lipid, fatty acid and isoprenoid biosynthesis "	"FunCat"	"10"	"0.0378655911135923"	"3"	"0.0259576444194924"
"lipid, fatty acid and isoprenoid metabolism"	"FunCat"	"10"	"0.0103970495397717"	"2"	"0.0566912378096148"
"nitrogen and sulfur metabolism"	"FunCat"	"10"	"0.000280221585159546"	"1"	"0.067489057028328"
"Carbon fixation"	"KEGG"	"10"	"0.0322826656180447"	"2"	"0.110670579070729"
"Glutamate metabolism"	"KEGG"	"10"	"0.00690191101495263"	"1"	"0.180357751215947"
"Glycan Biosynthesis and Metabolism"	"KEGG"	"10"	"0.0111920932584400"	"1"	"0.313734278364516"
"Glycine, serine and threonine metabolism"	"KEGG"	"10"	"0.000429842508892915"	"1"	"0.136021190505023"
"Lysine degradation"	"KEGG"	"10"	"1.72421473266693e-07"	"3"	"0.000549232937746943"
"Nitrogen metabolism"	"KEGG"	"10"	"0.00273424606148910"	"1"	"0.112004185304113"
"Peptidoglycan biosynthesis"	"KEGG"	"10"	"5.06431516780171e-11"	"1"	"0.0030778030673011"
"Tryptophan metabolism"	"KEGG"	"10"	"3.9189087987312e-05"	"3"	"0.00295968733872889"
"Valine, leucine and isoleucine degradation"	"KEGG"	"10"	"0.000263918547012526"	"3"	"0.00329674960164087"
"Vitamin B6 metabolism"	"KEGG"	"10"	"1.08780743692615e-11"	"1"	"0.00631432730915981"
"degradation of abscisic acid"	"LitPath"	"10"	"8.61122545009918e-10"	"1"	"0.00430944927888316"
"isoleucine degradation I"	"AraCyc"	"9"	"0.00201336215203038"	"2"	"0.027672906883125"
"isoleucine degradation III"	"AraCyc"	"9"	"6.07610087430119e-06"	"2"	"0.00383016068277008"
"leucine degradation I"	"AraCyc"	"9"	"0.00201336215203038"	"2"	"0.027672906883125"
"leucine degradation II"	"AraCyc"	"9"	"6.07610087430119e-06"	"2"	"0.00383016068277008"
"valine degradation I"	"AraCyc"	"9"	"0.00161194594914999"	"2"	"0.0670956373216343"
"valine degradation II"	"AraCyc"	"9"	"4.60721239642176e-06"	"2"	"0.0106996955721269"
"formaldehyde assimilation I (serine pathway)"	"AraCyc"	"8"	"0.0153914443675575"	"2"	"0.0623928992019069"
"transport "	"FunCat"	"8"	"1.73348288124628e-11"	"2"	"9.50950665409986e-06"
"Butanoate metabolism"	"KEGG"	"8"	"0.000581738213584442"	"2"	"0.00964594850127259"
"Fatty acid biosynthesis (path 2)"	"KEGG"	"8"	"5.25830181037665e-07"	"2"	"0.000610481638004023"
"Fatty acid metabolism"	"KEGG"	"8"	"0.0183752070835709"	"2"	"0.0223734675264503"
"Propanoate metabolism"	"KEGG"	"8"	"0.00118399923138928"	"2"	"0.0159731916272790"
"fatty acid beta oxidation complex"	"BioPath"	"7"	"6.93961975371032e-05"	"1"	"0.0385705263225679"
"fatty acid beta-oxidation"	"TAIR-GO"	"7"	"8.07574227408433e-08"	"1"	"0.00130147071471247"
"secondary metabolism"	"TAIR-GO"	"7"	"0"	"1"	"0"
"fatty acid oxidation pathway"	"AraCyc"	"7"	"0.0195470151166387"	"1"	"0.0963710814434535"
"degradation "	"FunCat"	"7"	"0.00215995796117927"	"1"	"0.106425618438315"
"protein degradation "	"FunCat"	"7"	"0.000215965730988025"	"1"	"0.0615740004537713"
"STRESS DATA SET"	"quantDE"	"0"	"maxDE"	"2.706197"	"STRESS DATA SET"
"HORMONE DATA SET"	"quantDE"	"0.6394862"	"maxDE"	"2.2895582"	"HORMONE DATA SET"
"Synthesis and storage of oil"	"AcylLipid"	"24"	"1.53803880907926e-35"	"6"	"6.33478025515983e-10"
"gibberellin biosynthesis"	"AraCyc"	"22"	"4.01827725375398e-26"	"3"	"8.48385559694593e-06"
"secondary metabolism"	"FunCat"	"22"	"1.90236052945623e-16"	"3"	"0.00334967472754827"
"gibberellic acid biosynthesis"	"TAIR-GO"	"20"	"4.83687487912613e-26"	"2"	"0.000102147430910872"
"Diterpenoid biosynthesis"	"KEGG"	"20"	"2.31282311419488e-23"	"2"	"0.000150948212484087"
"Gibberellin metabolism"	"LitPath"	"20"	"8.32655838835405e-19"	"2"	"0.000677889095515924"
"giberelin biosynthesis"	"LitPath"	"20"	"3.06653145641731e-22"	"2"	"0.000291588123201780"
"Biosynthesis of Amino Acids and Derivatives"	"BioPath"	"14"	"1.83559845979363e-05"	"3"	"0.00677647961337242"
"Glutathione metabolism"	"BioPath"	"14"	"1.47135636527509e-10"	"3"	"0.000251546811254067"
"Cell Wall Carbohydrate Metabolism"	"BioPath"	"12"	"0.00877742927288272"	"2"	"0.218915328688238"
"toxin catabolism"	"TAIR-GO"	"12"	"7.20264776642647e-12"	"2"	"0.00722283925081599"
"phenylalanine degradation I"	"AraCyc"	"12"	"3.43700835295406e-09"	"3"	"0.000263434865208841"
"tyrosine degradation"	"AraCyc"	"12"	"2.89891924229017e-15"	"3"	"3.66351297867494e-06"
"Glutathione metabolism"	"KEGG"	"12"	"2.55743344171540e-08"	"2"	"0.00651097039909001"
"Glycine, serine and threonine metabolism"	"KEGG"	"11"	"2.73833827978781e-08"	"2"	"0.00420622868800659"
"glucosinolate biosynthesis"	"TAIR-GO"	"10"	"6.30288945840982e-12"	"1"	"0.00215307171163213"
"glucosinolate biosynthesis from homomethionine"	"AraCyc"	"10"	"5.09677867456727e-12"	"1"	"0.00138295222226895"
"biosynthesis of phenylpropanoids"	"FunCat"	"10"	"8.00005841609023e-07"	"1"	"0.0494214213776222"
"biosynthesis of secondary products derived from L-phenylalanine and L-tyrosine"	"FunCat"	"10"	"8.00005841609023e-07"	"1"	"0.0494214213776222"
"plant / fungal specific systemic sensing and response "	"FunCat"	"10"	"2.06928976133569e-08"	"1"	"0.0166219164160259"
"plant hormonal regulation"	"FunCat"	"10"	"2.06928976133569e-08"	"1"	"0.0166219164160259"
"Carbon fixation"	"KEGG"	"10"	"6.70091045486317e-05"	"2"	"0.0214297514164425"
"Glucosinolate Metabolism"	"LitPath"	"10"	"1.18697544448109e-05"	"1"	"0.0188022538346452"
"cytokinin transport"	"TAIR-GO"	"9"	"0"	"1"	"0"
"photorespiration"	"TAIR-GO"	"9"	"1.64805131688085e-14"	"1"	"0.000781624257685628"
"glycine biosynthesis I"	"AraCyc"	"9"	"4.37945487227101e-06"	"1"	"0.0936313507791307"
"photorespiration"	"AraCyc"	"9"	"1.41484671877844e-06"	"1"	"0.0622232221437978"
"superpathway of serine and glycine biosynthesis II"	"AraCyc"	"9"	"1.25873850245436e-08"	"1"	"0.0280523361568382"
"ascorbic acid biosynthesis"	"BioPath"	"8"	"3.15635554672662e-09"	"1"	"0.00442087449963415"
"biosynthesis of pyrimidine ribonucleotides"	"AraCyc"	"8"	"8.72580611328262e-07"	"2"	"0.00243908396678512"
"de novo biosynthesis of pyrimidine ribonucleotides"	"AraCyc"	"8"	"7.26187858665436e-07"	"2"	"0.00213890317678705"
"methylglyoxal degradation"	"AraCyc"	"8"	"5.34504563736823e-09"	"2"	"0.000540906229194895"
"threonine degradation"	"AraCyc"	"8"	"5.88012294789231e-08"	"2"	"0.00186288365261663"
"transport "	"FunCat"	"8"	"2.25446390285433e-14"	"2"	"1.08305747426717e-06"
"Tyrosine metabolism"	"KEGG"	"8"	"3.81170869966132e-05"	"2"	"0.00567485634164446"
"MUTANT DATA SET"	"quantDE"	"0"	"maxDE"	"3.538701543"	"MUTANT DATA SET"
"Lipid signaling"	"AcylLipid"	"14"	"0.00253411505321593"	"4"	"0.111763302344563"
"storage protein"	"FunCat"	"12"	"3.14658740591375e-25"	"3"	"7.59958833649852e-09"
"Synthesis and storage of oil"	"AcylLipid"	"12"	"9.39940283984409e-14"	"4"	"5.4421081247929e-06"
"gibberellic acid biosynthesis"	"TAIR-GO"	"10"	"2.58596373319779e-14"	"1"	"0.00100637567966791"
"gibberellin biosynthesis"	"AraCyc"	"10"	"6.03763315006846e-14"	"1"	"0.00137638308807434"
"plant / fungal specific systemic sensing and response "	"FunCat"	"10"	"1.19570430443152e-10"	"1"	"0.00690499524822628"
"plant hormonal regulation"	"FunCat"	"10"	"1.19570430443152e-10"	"1"	"0.00690499524822628"
"secondary metabolism"	"FunCat"	"10"	"2.51382763102854e-07"	"1"	"0.060581268141804"
"Diterpenoid biosynthesis"	"KEGG"	"10"	"3.2896800204895e-13"	"1"	"0.000471821072569309"
"Gibberellin metabolism"	"LitPath"	"10"	"5.1203362796123e-11"	"1"	"0.00344112183428118"
"giberelin biosynthesis"	"LitPath"	"10"	"9.73327099341983e-13"	"1"	"0.00198937964363037"
"DNA-directed RNA polymerase II, core complex"	"TAIR-GO"	"9"	"0"	"1"	"0"
"transcription from RNA polymerase II promoter"	"TAIR-GO"	"9"	"0"	"1"	"0"
"transport "	"FunCat"	"9"	"1.27031529156453e-18"	"2"	"2.64015110112782e-07"
"transport facilitation"	"FunCat"	"9"	"0"	"2"	"2.64015110112782e-07"
"RNA polymerase"	"KEGG"	"9"	"7.08550673593472e-10"	"1"	"0.00534027051288256"
"Transcription"	"KEGG"	"9"	"9.72521251401546e-08"	"1"	"0.0189213568238171"
"Carbon fixation"	"KEGG"	"8"	"3.96293207970201e-06"	"2"	"0.000666357058332996"
"transport ATPases"	"FunCat"	"7"	"4.14644250648148e-06"	"1"	"0.0190013921448736"
"Oxidative phosphorylation"	"KEGG"	"7"	"5.65546767903903e-06"	"1"	"0.0170994812317931"