"Pathway" "Pathway.source" "V3" "V4" "V5" "V6" "IN THREE DATA SETS" "" "sum.of.scores" "sum.of.genes" "" "" "Starch and sucrose metabolism" "KEGG" "94" "21" "" "" "transport " "FunCat" "92" "21" "" "" "biogenesis of cell wall" "FunCat" "70" "22" "" "" "transport facilitation" "FunCat" "70" "18" "" "" "secondary metabolism" "FunCat" "59" "13" "" "" "starch biosynthesis" "AraCyc" "45" "6" "" "" "glucosinolate biosynthesis" "TAIR-GO" "30" "3" "" "" "ORGAN DATA SET" "quantDE" "0" "maxDE" "0.5745732" "ORGAN DATA SET" "STRESS DATA SET" "quantDE" "0.05818066" "maxDE" "3.511583" "STRESS DATA SET" "Photosystems " "BioPath" "96" "8.1758701613681e-45" "13" "2.63358143375445e-08" "Photosystem I" "BioPath" "36" "8.56885327187261e-13" "6" "0.000186766540014846" "Photosynthesis" "KEGG" "34" "8.62743648264701e-36" "5" "2.16734011373364e-07" "biogenesis of chloroplast" "FunCat" "32" "3.12607834694362e-15" "4" "0.000576022318092384" "additional photosystem II components" "BioPath" "28" "1.67301971447821e-10" "3" "0.009581627099464" "Photosystem II" "BioPath" "28" "8.24985034732753e-11" "4" "0.00136953339330514" "Chlorophyll a/b binding proteins" "BioPath" "24" "1.9098343399779e-13" "3" "0.000625271964970028" "secondary metabolism" "FunCat" "20" "6.86558497168474e-10" "2" "0.0308926595257677" "Glucosinolate Metabolism" "LitPath" "20" "3.67954082685029e-16" "2" "0.000607773858220544" "Photosystem II reaction center" "BioPath" "18" "2.63162830901327e-15" "3" "3.9259202051488e-05" "transport " "FunCat" "18" "0" "2" "1.41734427534230e-06" "glycine biosynthesis I" "AraCyc" "17" "1.40119095735823e-10" "3" "0.00187460913766931" "photorespiration" "AraCyc" "17" "1.68191278334675e-11" "3" "0.000765304814402491" "superpathway of serine and glycine biosynthesis II" "AraCyc" "17" "2.13665279152998e-15" "3" "0.000134845842262394" "light harvesting complex" "BioPath" "16" "1.53659490667407e-15" "2" "0.000189609159298056" "aerobic respiration" "FunCat" "16" "1.35101003897676e-12" "2" "0.000586072973244543" "respiration" "FunCat" "16" "1.35101003897676e-12" "2" "0.000586072973244543" "Carbon fixation" "KEGG" "15" "2.67946563904853e-07" "2" "0.0169646883037333" "photorespiration" "TAIR-GO" "13" "2.51149479091378e-17" "2" "2.84537293355047e-05" "ATP-dependent proteolysis" "TAIR-GO" "12" "3.56223396803433e-13" "3" "1.18265605697473e-05" "formaldehyde assimilation I (serine pathway)" "AraCyc" "12" "5.31364177843709e-06" "2" "0.00774078359745979" "serine-isocitrate lyase pathway" "AraCyc" "12" "0.000322522374445266" "2" "0.0181278367278466" "Starch and sucrose metabolism" "KEGG" "11" "0.000670396469783478" "2" "0.0247678284261546" "ATP synthase components" "BioPath" "10" "1.67614590320116e-06" "1" "0.0189017142256164" "Cytochrome b6/f complex" "BioPath" "10" "1.31313676864296e-07" "1" "0.0153351040797305" "Oxygen-evolving enhancer protein" "BioPath" "10" "5.11946922629461e-10" "1" "0.00450673537771262" "Plastocyanin" "BioPath" "10" "4.16648976059873e-13" "1" "0.000470240035775794" "starch metabolism" "BioPath" "10" "0.00758966718481429" "1" "0.138660204338891" "ATP synthesis coupled proton transport" "TAIR-GO" "10" "2.24152709967356e-11" "1" "0.00205083982820306" "chloroplast ATP synthase complex" "TAIR-GO" "10" "1.17937679264754e-15" "1" "0.000210832096122819" "extrinsic to photosynthetic water oxidation" "TAIR-GO" "10" "0" "1" "0" "glucosinolate biosynthesis" "TAIR-GO" "10" "3.30735136484441e-08" "1" "0.0055861580051903" "glucosinolate catabolism" "TAIR-GO" "10" "5.37846349995361e-16" "1" "0.000210832096122819" "hypersensitive response" "TAIR-GO" "10" "2.76838946931182e-10" "1" "0.00304808894896742" "photosynthetic water oxidation" "TAIR-GO" "10" "0" "1" "0" "proton transport" "TAIR-GO" "10" "2.24152709967356e-11" "1" "0.00205083982820306" "response to bacteria" "TAIR-GO" "10" "0" "1" "0" "response to chemical substance" "TAIR-GO" "10" "0" "1" "0" "response to UV" "TAIR-GO" "10" "6.20929288587369e-07" "1" "0.0148645985673789" "colanic acid building blocks biosynthesis" "AraCyc" "10" "0.00388943608472603" "1" "0.154790899521574" "dTDP-rhamnose biosynthesis" "AraCyc" "10" "0.000302366563905838" "1" "0.100341074941681" "galactose degradation I" "AraCyc" "10" "9.29471875847043e-13" "1" "0.00310058318333979" "glucose and glucose-1-phosphate degradation" "AraCyc" "10" "5.00239426846232e-09" "1" "0.0109767228146169" "glucose conversion" "AraCyc" "10" "0.000144222112022832" "1" "0.0887191515211026" "glucosinolate biosynthesis from homomethionine" "AraCyc" "10" "1.13368326695132e-09" "1" "0.00150036263720875" "lactose degradation IV" "AraCyc" "10" "9.29471875847043e-13" "1" "0.00310058318333979" "peptidoglycan biosynthesis" "AraCyc" "10" "1.61291853827679e-11" "1" "0.00410110068145078" "starch biosynthesis" "AraCyc" "10" "0" "1" "0" "sucrose biosynthesis" "AraCyc" "10" "4.93024060589489e-06" "1" "0.0252898853416583" "sucrose degradation III" "AraCyc" "10" "2.53864099092273e-07" "1" "0.0164883193708503" "trehalose biosynthesis I" "AraCyc" "10" "0.0354345302394597" "1" "0.246120719118042" "trehalose biosynthesis II" "AraCyc" "10" "0.00364800217900063" "1" "0.146059792187670" "trehalose biosynthesis III" "AraCyc" "10" "5.52176805417604e-05" "1" "0.0600568744703895" "UDP-glucose conversion" "AraCyc" "10" "0.000114853762747413" "1" "0.0849424249166798" "UDP-N-acetylglucosamine biosynthesis" "AraCyc" "10" "5.54806543473e-10" "1" "0.00310058318333979" "biogenesis of cell wall" "FunCat" "10" "0.00524396957329196" "1" "0.168049874974466" "biosynthesis of glycosides" "FunCat" "10" "4.20696560836102e-16" "1" "0.00038660149439778" "C-compound, carbohydrate anabolism" "FunCat" "10" "1.23606308051312e-07" "1" "0.0196187766490789" "metabolismn of primary metabolic sugars derivatives " "FunCat" "10" "4.20696560836102e-16" "1" "0.00038660149439778" "transport ATPases" "FunCat" "10" "4.92567390867804e-05" "1" "0.051829845330951" "transport facilitation" "FunCat" "10" "0" "1" "0.00038660149439778" "ATP synthesis" "KEGG" "10" "2.25833278621491e-06" "1" "0.0444847988447283" "Tryptophan metabolism" "KEGG" "10" "1.96689841208998e-07" "1" "0.0330155785667132" "Phenylpropanoid pathway" "LitPath" "10" "0.00598735271968376" "1" "0.190966202141989" "alanine biosynthesis II" "AraCyc" "9" "3.88015529888352e-05" "1" "0.0383822556677142" "alanine degradation III" "AraCyc" "9" "2.59526365822949e-13" "1" "0.00045740538186652" "Alanine and aspartate metabolism" "KEGG" "9" "7.12357044033546e-06" "1" "0.027799989841663" "Glutamate metabolism" "KEGG" "9" "0.000354517655377565" "1" "0.0506992510830164" "Chloroplastic protein turnover" "BioPath" "8" "2.19487089307605e-05" "2" "0.00189902122132003" "ClpP protease complex " "BioPath" "8" "2.42059636556063e-07" "2" "0.000759842207946233" "photosystem I subunit precursor" "BioPath" "8" "1.01075766668941e-08" "2" "9.63019156735039e-05" "chlorophyll binding" "TAIR-GO" "8" "2.93287167190143e-05" "1" "0.0148645985673789" "chloroplastic endopeptidase Clp complex" "TAIR-GO" "8" "2.00551143671246e-10" "2" "9.76176105792444e-05" "photosystem I" "TAIR-GO" "8" "3.73990676306632e-08" "1" "0.0042282774843227" "photosystem II" "TAIR-GO" "8" "2.45953415060688e-09" "1" "0.00205083982820306" "photosystem II antenna complex" "TAIR-GO" "8" "5.42068398480823e-12" "1" "0.000626690611065736" "PSII associated light-harvesting complex II" "TAIR-GO" "8" "3.89257964000313e-13" "1" "0.000210832096122819" "accessory proteins of electron transport and membrane-associated energy conservation" "FunCat" "8" "2.62239132527885e-12" "1" "0.00038660149439778" "electron transport and membrane-associated energy conservation " "FunCat" "8" "4.01527654533525e-08" "1" "0.00444072252760769" "energy" "FunCat" "8" "2.62239132527885e-12" "1" "0.00038660149439778" "Cyanoamino acid metabolism" "KEGG" "7" "1.17502127816964e-05" "2" "0.00112439929256099" "HORMONE DATA SET" "quantDE" "0" "maxDE" "0.9302487" "HORMONE DATA SET" "Cell Wall Carbohydrate Metabolism" "BioPath" "96" "1.39083164990855e-25" "33" "1.24453203391063e-08" "pectin metabolism" "BioPath" "64" "1.19159276480858e-37" "26" "1.04741848027207e-12" "Intermediary Carbon Metabolism" "BioPath" "26" "0.0124051514603331" "6" "0.379946419550014" "nucleotide metabolism" "FunCat" "22" "0" "5" "0" "mono-/sesqui-/di-terpene biosynthesis" "LitPath" "22" "1.46103158407114e-07" "4" "0.0218901112582713" "terpenoid metabolism" "LitPath" "22" "1.62335233325394e-07" "4" "0.0249204928338649" "(deoxy)ribose phosphate degradation" "AraCyc" "20" "1.0923601779636e-22" "4" "1.19732948516849e-06" "biosynthesis of derivatives of homoisopentenyl pyrophosphate " "FunCat" "20" "1.03431310396846e-12" "2" "0.0164883878395790" "pyrimidine nucleotide metabolism" "FunCat" "20" "7.36460983944528e-16" "4" "0.000283502086619133" "Nucleotide Metabolism" "KEGG" "20" "7.08187560042328e-06" "4" "0.0444565698442302" "Pyrimidine metabolism" "KEGG" "20" "4.21910355653192e-11" "4" "0.00326081583813783" "Miscellaneous acyl lipid metabolism" "AcylLipid" "20" "0.00222765575560216" "8" "0.0592716104865411" "Fatty acid elongation and wax and cutin metabolism" "AcylLipid" "19" "4.17782921064675e-07" "6" "0.00445260120491433" "Flavonoid and anthocyanin metabolism" "BioPath" "18" "3.7495667230385e-08" "4" "0.0540512118994498" "biogenesis of cell wall" "FunCat" "16" "0.00204801646603571" "6" "0.00885154455696984" "Glycolysis / Gluconeogenesis" "KEGG" "16" "0.00247498787628798" "4" "0.0466095981348982" "C-compound, carbohydrate catabolism" "FunCat" "14" "1.81939494331531e-05" "3" "0.0641068987489557" "plant / fungal specific systemic sensing and response " "FunCat" "14" "1.36888216272357e-06" "2" "0.0315249982657907" "plant hormonal regulation" "FunCat" "14" "1.36888216272357e-06" "2" "0.0315249982657907" "transport " "FunCat" "14" "2.86485980818975e-21" "4" "0" "transport facilitation" "FunCat" "14" "0" "4" "0" "Ligand-Receptor Interaction" "KEGG" "14" "1.31187397162551e-07" "6" "0.000273844410467096" "Starch and sucrose metabolism" "KEGG" "14" "0.0174409653271699" "5" "0.0119036917026020" "Nitrogen metabolism" "KEGG" "13" "0.000367443092984045" "2" "0.0476250495809558" "abscisic acid biosynthesis" "AraCyc" "12" "1.25606356186624e-15" "2" "7.52630013245624e-05" "acetate fermentation" "AraCyc" "12" "0.0016144388548907" "3" "0.0462805976478618" "fructose degradation (anaerobic)" "AraCyc" "12" "0.000952330932842933" "3" "0.0364627898604683" "glycerol degradation II" "AraCyc" "12" "6.19965662671899e-05" "3" "0.0119412674333828" "glycolysis IV" "AraCyc" "12" "0.00101990446525260" "3" "0.0383190406165929" "mixed acid fermentation" "AraCyc" "12" "7.59777125377834e-06" "3" "0.00488003961545596" "non-phosphorylated glucose degradation" "AraCyc" "12" "2.44191072233865e-08" "3" "0.00350732719244178" "sorbitol fermentation" "AraCyc" "12" "0.00171907902821534" "3" "0.0421924525759564" "TCA cycle -- aerobic respiration" "AraCyc" "12" "0.000177003705482939" "2" "0.0669283821184187" "TCA cycle variation IV" "AraCyc" "12" "0.000141261715599310" "2" "0.0602379539845333" "TCA cycle variation VII" "AraCyc" "12" "0.00941861100426088" "2" "0.164275576950607" "TCA cycle variation VIII" "AraCyc" "12" "0.000408303293554734" "2" "0.0739447429678799" "Carbon fixation" "KEGG" "12" "0.0212033175042133" "3" "0.0845029190587973" "Citrate cycle (TCA cycle)" "KEGG" "12" "0.000401866833735733" "2" "0.0869365552597405" "Ion channels" "KEGG" "12" "3.33379660318172e-06" "5" "0.00141289970430358" "Purine metabolism" "KEGG" "12" "0.00737422438947989" "3" "0.0669474323659366" "abscisic acid biosynthesis" "LitPath" "12" "2.31954289324937e-08" "2" "0.00691555367907198" "Carotenoid and abscisic acid metabolism" "LitPath" "12" "0.00537317410353162" "2" "0.100556097241581" "flavonoid biosynthesis" "AraCyc" "11" "1.98171597196638e-06" "3" "0.00184667574357282" "C-compound, carbohydrate anabolism" "FunCat" "11" "4.50059085864921e-06" "3" "0.00458163735363287" "cellulose biosynthesis" "BioPath" "10" "0.0156043335156776" "3" "0.0872461052730941" "gibberellic acid biosynthesis" "TAIR-GO" "10" "7.57060361715916e-09" "1" "0.00736895572964276" "gibberellic acid mediated signaling" "TAIR-GO" "10" "3.125689924668e-12" "1" "0.00140134210189472" "glucosinolate biosynthesis" "TAIR-GO" "10" "6.70026116688121e-10" "1" "0.00383657134631592" "monoterpenoid biosynthesis" "TAIR-GO" "10" "1.54782710025524e-13" "1" "0.000847134003163795" "oxygen binding" "TAIR-GO" "10" "1.83909535396568e-17" "1" "0.000143324282093345" "response to wounding" "TAIR-GO" "10" "2.47304436935019e-06" "1" "0.0285156674327868" "gibberellin biosynthesis" "AraCyc" "10" "3.09290201162563e-07" "1" "0.0229718062581553" "glucosinolate biosynthesis from phenylalanine" "AraCyc" "10" "6.82775056174749e-11" "1" "0.00231737000890879" "monoterpene biosynthesis" "AraCyc" "10" "1.21639640432640e-12" "1" "0.00117395849609193" "Diterpenoid biosynthesis" "KEGG" "10" "1.97610799311062e-05" "1" "0.0364617438914134" "Fructose and mannose metabolism" "KEGG" "10" "0.0123179055689167" "2" "0.113162030639421" "Galactose metabolism" "KEGG" "10" "0.000932384229966293" "2" "0.0439556516305765" "diterpene biosynthesis" "LitPath" "10" "2.20272495274942e-11" "1" "0.00289337521341901" "Gibberellin metabolism" "LitPath" "10" "0.0124192988314041" "1" "0.235671077542335" "monoterpene biosynthesis" "LitPath" "10" "1.45697623066564e-06" "1" "0.0260534594139766" "gibberellic acid catabolism" "TAIR-GO" "9" "4.50077670974645e-11" "1" "0.00140134210189472" "biosynthesis of phenylpropanoids" "FunCat" "9" "0.0234141716235487" "4" "0.00768475579185305" "biosynthesis of secondary products derived from L-phenylalanine and L-tyrosine" "FunCat" "9" "0.0234141716235487" "4" "0.00768475579185305" "proanthocyanidin biosynthesis" "TAIR-GO" "8" "3.29052661447724e-12" "1" "0.000426757003132605" "biosynthesis of proto- and siroheme" "AraCyc" "8" "0.0112001213315203" "2" "0.0478747363428615" "cellulose biosynthesis" "AraCyc" "8" "0.0144893911341594" "2" "0.0570181748811233" "chlorophyll biosynthesis" "AraCyc" "8" "0.0476056918021733" "2" "0.0850563943216528" "transport ATPases" "FunCat" "8" "0.0331859437229605" "2" "0.114312604043735" "ATP synthesis" "KEGG" "8" "0.0129716529510521" "2" "0.0820423714882652" "Flavonoid biosynthesis" "KEGG" "8" "6.06470205893905e-05" "2" "0.00722183686959533" "flavonoid biosynthesis" "TAIR-GO" "7" "1.31837868286771e-07" "1" "0.00289904961104746" "iron-sulfur cluster assembly" "TAIR-GO" "7" "0" "1" "0" "pentacyclic triterpenoid biosynthesis" "TAIR-GO" "7" "3.75160259288958e-07" "1" "0.00383657134631592" "C-compound and carbohydrate utilization " "FunCat" "7" "8.91129954924722e-10" "2" "0" "triterpene biosynthesis" "LitPath" "7" "0.00429900997680531" "1" "0.0986885871742697" "MUTANT DATA SET" "quantDE" "0" "maxDE" "3.098490248" "MUTANT DATA SET" "Cell Wall Carbohydrate Metabolism" "BioPath" "301.5" "8.1378360974552e-34" "81" "1.32798802283999e-09" "C-compound and carbohydrate metabolism" "FunCat" "161" "2.37425856354439e-06" "40" "0.0139419464603316" "Phenylpropanoid Metabolism" "BioPath" "119" "0.0224426434220773" "24" "0.341253005800749" "pectin metabolism" "BioPath" "118.5" "7.96766801464396e-25" "50" "1.07068934470205e-11" "Lipid signaling" "AcylLipid" "73" "0.00433435057326092" "15" "0.333915523928105" "Isoprenoid Biosynthesis in the Cytosol and in Mitochondria" "BioPath" "72" "0.00015915748136024" "12" "0.0658392255821517" "mono-/sesqui-/di-terpene biosynthesis" "LitPath" "72" "2.66870919170090e-19" "12" "0.000739172465417675" "terpenoid metabolism" "LitPath" "72" "3.93717739621872e-19" "12" "0.00106511715328803" "triterpene, sterol, and brassinosteroid metabolism" "LitPath" "71" "0.0127920537514849" "15" "0.0863014710445959" "Starch and sucrose metabolism" "KEGG" "69" "4.11845357178998e-09" "14" "0.00596154485910597" "cellulose biosynthesis" "BioPath" "66" "9.54243012677545e-14" "11" "0.0117118327759496" "Nucleotide Metabolism" "KEGG" "65" "1.43580201512239e-10" "13" "0.0159528008549905" "transport " "FunCat" "60" "0" "15" "0" "Purine metabolism" "KEGG" "53" "4.49221975076514e-08" "10" "0.0318342740806978" "Pyruvate metabolism" "KEGG" "53" "0.000173910031165298" "9" "0.173385526530155" "Biosynthesis of prenyl diphosphates" "BioPath" "50" "0.00128859550163249" "8" "0.119477862464326" "lipases pathway" "AraCyc" "47" "2.52089842874828e-16" "7" "0.00419982443105577" "Biosynthesis of steroids" "KEGG" "47" "0.000203363120916791" "8" "0.0342994250545072" "transport facilitation" "FunCat" "46" "0" "13" "0" "biogenesis of cell wall" "FunCat" "44" "0.000113387083034070" "15" "0.00130663814724697" "lactose degradation IV" "AraCyc" "43" "0" "10" "0" "Translation factors" "KEGG" "41" "0.00136099366031055" "15" "0.00941048291496505" "Flavonoid and anthocyanin metabolism" "BioPath" "39" "2.90361081701194e-05" "11" "0.0524879876546359" "starch metabolism" "BioPath" "37" "1.46215155106238e-05" "5" "0.199049775773825" "acetate fermentation" "AraCyc" "36" "0.0235433538425747" "10" "0.100827997789060" "trans-zeatin biosynthesis" "AraCyc" "36" "4.24966903361728e-33" "7" "1.52310287754123e-08" "Citrate cycle (TCA cycle)" "KEGG" "36" "1.72681094910527e-05" "6" "0.106493367120210" "Phenylalanine, tyrosine and tryptophan biosynthesis" "KEGG" "36" "0.00113808442552368" "4" "0.427534808162963" "cellulose biosynthesis" "AraCyc" "34" "0.000891645274546435" "6" "0.180073456662112" "fructose degradation (anaerobic)" "AraCyc" "34" "0.0259568323075065" "10" "0.0650660894014961" "glycolysis IV" "AraCyc" "34" "0.0286430197327113" "10" "0.071441501975758" "TCA cycle -- aerobic respiration" "AraCyc" "34" "0.00171792492275097" "8" "0.0555444965956267" "TCA cycle variation IV" "AraCyc" "34" "0.00114825668859393" "8" "0.0435881130763809" "TCA cycle variation VIII" "AraCyc" "34" "0.00708285107272575" "8" "0.0694478636330183" "C-compound, carbohydrate catabolism" "FunCat" "34" "1.53516696231782e-07" "9" "0.0124197869354160" "nucleotide metabolism" "FunCat" "34" "0" "7" "0" "Pyrimidine metabolism" "KEGG" "34" "7.13677525482344e-07" "8" "0.0144656523658041" "Fatty acid elongation and wax and cutin metabolism" "AcylLipid" "34" "0.0497846922907763" "8" "0.193766199879811" "lipid, fatty acid and isoprenoid degradation" "FunCat" "33" "1.08722398256568e-08" "4" "0.176170233372325" "brassinosteroid biosynthesis" "LitPath" "33" "0.0297065333534119" "4" "0.280927917207201" "intracellular signalling" "FunCat" "32.5" "0.000868395167100555" "8" "0.153681742532478" "triacylglycerol degradation" "AraCyc" "32" "2.6784860957675e-08" "15" "7.10513630946317e-05" "secondary metabolism" "FunCat" "32" "0.0226698806214265" "10" "0.0647646501922249" "aromatic amino acid family biosynthesis" "TAIR-GO" "30" "1.02226060220416e-13" "3" "0.00799633985389356" "dTDP-rhamnose biosynthesis" "AraCyc" "30" "0.000320050482288115" "6" "0.165484755084905" "transcription" "FunCat" "30" "1.47535804460895e-18" "8" "2.94424818445358e-06" "galactose degradation I" "AraCyc" "29" "0" "6" "1.45589641963533e-07" "Protein export" "KEGG" "29" "2.54470669588624e-07" "8" "0.00141648331311007" "hemicellulose biosynthesis" "BioPath" "28" "2.09734281370089e-06" "3" "0.152564272645628" "energy" "FunCat" "28" "0" "6" "0" "RNA synthesis " "FunCat" "28" "7.75899713185044e-07" "7" "0.00731973733415513" "Fructose and mannose metabolism" "KEGG" "28" "0.0437398153060148" "5" "0.304867755684829" "prenyl diphosphate (GPP,FPP, GGPP) biosynthesis" "LitPath" "28" "0.00243145021710375" "4" "0.0954125977205915" "proanthocyanidin biosynthesis" "TAIR-GO" "26" "0" "3" "0" "trehalose biosynthesis III" "AraCyc" "26" "0.000315304120000335" "7" "0.0160230014979842" "starch biosynthesis" "AraCyc" "25" "0" "4" "0" "UDP-N-acetylglucosamine biosynthesis" "AraCyc" "25" "3.19850006794099e-15" "4" "0.000231142780481516" "C-compound and carbohydrate utilization " "FunCat" "25" "0" "7" "0" "Cyanoamino acid metabolism" "KEGG" "25" "7.7620276816693e-07" "6" "0.00895332541133867" "aspartate/ornithin cycle / nitric oxid from glutamate" "BioPath" "24" "2.76092584779951e-09" "4" "0.0288339960281798" "alanine biosynthesis II" "AraCyc" "24" "4.17411758797104e-05" "4" "0.118401821283309" "phenylalanine biosynthesis II" "AraCyc" "24" "1.28157122380697e-06" "4" "0.0760528819572869" "degradation " "FunCat" "24" "4.24251706132345e-05" "5" "0.0619555748312993" "gibberellin biosynthesis" "AraCyc" "23" "6.37653780282561e-07" "5" "0.000731357142748492" "de novo biosynthesis of purine nucleotides II" "AraCyc" "22" "0.000755538836656365" "5" "0.160640088675376" "sucrose degradation III" "AraCyc" "22" "1.23336018397434e-06" "5" "0.0043746996022257" "ascorbic acid biosynthesis" "BioPath" "20" "0.0211489352499533" "3" "0.301022169180769" "GDP-carbohydrate biosynthesis" "BioPath" "20" "4.66593235567519e-07" "3" "0.0332531258606105" "Thylakoid biogenesis and photosystem assembly" "BioPath" "20" "2.59158184350382e-06" "2" "0.0538341367273066" "aromatic amino acid family biosynthesis, shikimate pathway" "TAIR-GO" "20" "3.94824796706922e-08" "2" "0.0319518020930762" "(deoxy)ribose phosphate degradation" "AraCyc" "20" "1.95326284004323e-08" "4" "0.00353714305696448" "sucrose biosynthesis" "AraCyc" "20" "0.00132242272918044" "4" "0.0533119483910256" "tryptophan biosynthesis" "AraCyc" "20" "0.0220296002808316" "4" "0.134551238078723" "tyrosine biosynthesis I" "AraCyc" "20" "1.17984079690409e-09" "2" "0.0613872692815377" "pyrimidine nucleotide metabolism" "FunCat" "20" "2.3777763248173e-06" "4" "0.0335931617440411" "Glycerophospholipid metabolism" "KEGG" "20" "0.00559849218240519" "4" "0.0710471118398975" "Ligand-Receptor Interaction" "KEGG" "20" "0.00559849218240519" "10" "0.00994226576000273" "sequiterpene biosynthesis" "LitPath" "20" "0" "2" "0" "brassinosteroid biosynthesis" "TAIR-GO" "19" "3.06334026278874e-06" "2" "0.0319518020930762" "steroid biosynthesis" "TAIR-GO" "19" "3.06334026278874e-06" "2" "0.0319518020930762" "response to light" "TAIR-GO" "18" "0.0120001937990723" "3" "0.182706655967685" "abscisic acid biosynthesis" "AraCyc" "18" "5.87693298996858e-13" "3" "0.000574793627602948" "biosynthesis of pyrimidine ribonucleotides" "AraCyc" "18" "0.00108842848276409" "4" "0.0891037347976605" "de novo biosynthesis of pyrimidine ribonucleotides" "AraCyc" "18" "0.000828531730409386" "4" "0.0760528819572869" "leucine biosynthesis" "AraCyc" "18" "6.72260247002336e-06" "3" "0.081376426836595" "non-phosphorylated glucose degradation" "AraCyc" "18" "0.00232165468077901" "5" "0.116680969472041" "metabolism of energy reserves (e.g. glycogen, trehalose)" "FunCat" "18" "0" "5" "0" "stress response" "FunCat" "18" "0" "3" "0" "DNA polymerase" "KEGG" "18" "2.58856796334991e-09" "5" "0.0031254711699356" "Folate biosynthesis" "KEGG" "18" "9.64119697605887e-06" "4" "0.0163852773038558" "Ion channels" "KEGG" "18" "0.0168888677839490" "9" "0.0200033845636171" "Terpenoid biosynthesis" "KEGG" "18" "0.0207131831654910" "3" "0.168826837538216" "abscisic acid biosynthesis" "LitPath" "18" "2.67815222322571e-05" "3" "0.0324585247208137" "defense response" "TAIR-GO" "17" "0.00649850294587123" "2" "0.116711071370765" "peptidoglycan biosynthesis" "AraCyc" "17" "3.01077021091909e-10" "4" "0.000562690027597937" "plant / fungal specific systemic sensing and response " "FunCat" "17" "0.0275983274843006" "3" "0.154478029913280" "plant hormonal regulation" "FunCat" "17" "0.0275983274843006" "3" "0.154478029913280" "Chloroplastic protein import via envelope membrane" "BioPath" "16" "0.0180543542534301" "4" "0.0962627244802638" "cytokinin biosynthesis" "TAIR-GO" "16" "1.24014323262970e-13" "2" "0.000831494979790286" "tryptophan biosynthesis" "TAIR-GO" "16" "0.00186885802571931" "2" "0.0792845993528975" "Basal transcription factors" "KEGG" "16" "0.0113377859475289" "6" "0.0529224959173761" "Prostaglandin and leukotriene metabolism" "KEGG" "16" "0.0457060506090469" "8" "0.192431061308529" "Prolin/Hydroxyproline from glutamate" "BioPath" "14" "0.000398601217416944" "3" "0.0332531258606105" "jasmonic acid biosynthesis" "TAIR-GO" "14" "0.0138235490955949" "2" "0.103583339626672" "formylTHF biosynthesis" "AraCyc" "14" "0.0139808080266476" "3" "0.115821972750672" "ureide biosynthesis" "AraCyc" "14" "2.71609558620687e-08" "3" "0.0102219693402056" "sugar, glucoside, polyol and carboxylate catabolism " "FunCat" "14" "0.000381643532330525" "4" "0.0196459623849806" "brassinosteroid modulation" "LitPath" "14" "9.63868650461434e-06" "6" "0.0025043100205956" "gibberellic acid biosynthesis" "TAIR-GO" "13" "0.00208518355737510" "2" "0.0250506605687885" "cell growth / morphogenesis " "FunCat" "13" "3.32593149741578e-08" "2" "0.0116269165014886" "second messenger mediated signal transduction" "FunCat" "13" "1.79024807057791e-10" "2" "0.00506971551399028" "tRNA synthesis " "FunCat" "13" "6.79914314696248e-07" "2" "0.0343018522629661" "trehalose metabolism" "BioPath" "12" "0.000853166991083702" "3" "0.0821327677494022" "abscisic acid biosynthesis" "TAIR-GO" "12" "0.000221137959648750" "2" "0.0190475285476612" "cell wall biosynthesis (sensu Magnoliophyta)" "TAIR-GO" "12" "0.0132615297372499" "2" "0.091092113130104" "anthocyanin biosynthesis" "AraCyc" "12" "0.000845579983269565" "2" "0.102920503867468" "folate biosynthesis" "AraCyc" "12" "0.00289723143332053" "3" "0.052958640905225" "galactokinase, colanic acid building blocks biosynthesis" "AraCyc" "12" "4.28678869498001e-07" "2" "0.0300298600792777" "galactokinase, galactose degradation I" "AraCyc" "12" "4.28678869498001e-07" "2" "0.0300298600792777" "galactokinase, lactose degradation IV" "AraCyc" "12" "4.28678869498001e-07" "2" "0.0300298600792777" "nitrogen and sulfur utilization " "FunCat" "12" "0.0356348049119157" "2" "0.115676925016945" "Aminosugars metabolism" "KEGG" "12" "0.0122396037037631" "3" "0.14909657699932" "response to UV" "TAIR-GO" "11" "0.0216052800099244" "2" "0.0397407890928105" "general transcription activities" "FunCat" "11" "0.0036325300733895" "4" "0.0143847693597872" "N-Glycan biosynthesis" "KEGG" "11" "0.0280509514090417" "2" "0.263027769353930" "Thiamine metabolism" "KEGG" "11" "2.63701449968712e-05" "2" "0.0373432914692579" "Lysin from aspartate" "BioPath" "10" "5.44019448340291e-05" "1" "0.133743088490038" "salycilic acid biosynthesis" "BioPath" "10" "0.000405091102775714" "1" "0.0877918159997734" "SRP (signal recognition particle)-dependent pathway for integral membrane proteins" "BioPath" "10" "0.0257874028685841" "1" "0.183587286124216" "acyl-CoA binding" "TAIR-GO" "10" "1.32899587098421e-09" "1" "0.00364594124846874" "anther dehiscence" "TAIR-GO" "10" "0" "1" "0" "anthranilate synthase complex" "TAIR-GO" "10" "2.79659847476759e-09" "1" "0.00364594124846874" "aromatic amino acid family biosynthesis, anthranilate pathway" "TAIR-GO" "10" "0" "1" "0" "cell death" "TAIR-GO" "10" "1.29917403051964e-05" "1" "0.0201740349667675" "cytochrome b6f complex" "TAIR-GO" "10" "2.15904450598001e-05" "1" "0.0465493635499511" "cytochrome b6f complex assembly" "TAIR-GO" "10" "0" "1" "0" "defense response to pathogenic bacteria, incompatible interaction" "TAIR-GO" "10" "1.29917403051964e-05" "1" "0.0322989145502326" "glucosinolate biosynthesis" "TAIR-GO" "10" "0.00691478797154716" "1" "0.0802633926269833" "lipid transport" "TAIR-GO" "10" "0.000100734732493599" "1" "0.0626275400401804" "microtubule cytoskeleton" "TAIR-GO" "10" "0" "1" "0" "monoterpenoid biosynthesis" "TAIR-GO" "10" "9.94257330089503e-06" "1" "0.0201740349667675" "oxygen binding" "TAIR-GO" "10" "2.79659847476759e-09" "1" "0.00364594124846874" "peptidyl-proline hydroxylation to 4-hydroxy-L-proline" "TAIR-GO" "10" "9.04652223074462e-11" "1" "0.00364594124846874" "pollen maturation" "TAIR-GO" "10" "0" "1" "0" "porphyrin biosynthesis" "TAIR-GO" "10" "0.016199299286288" "2" "0.0397407890928105" "programmed cell death" "TAIR-GO" "10" "0" "1" "0" "response to biotic stimulus" "TAIR-GO" "10" "0" "1" "0" "response to hypoxia" "TAIR-GO" "10" "9.04652223074462e-11" "1" "0.00364594124846874" "response to pathogenic bacteria" "TAIR-GO" "10" "1.29917403051964e-05" "1" "0.0322989145502326" "starch biosynthesis" "TAIR-GO" "10" "0.00149220811806046" "1" "0.0626275400401804" "unidimensional cell growth" "TAIR-GO" "10" "0.0468978731746753" "1" "0.184033740178796" "glucosinolate biosynthesis from phenylalanine" "AraCyc" "10" "0.00089033264303922" "1" "0.0583687122232201" "methylglyoxal degradation" "AraCyc" "10" "0.0094366266597583" "2" "0.179767962043035" "monoterpene biosynthesis" "AraCyc" "10" "3.51984607495332e-05" "1" "0.0313755101377564" "non-oxidative branch of the pentose phosphate pathway" "AraCyc" "10" "0.0108671343649072" "2" "0.152594536084933" "oxidative branch of the pentose phosphate pathway" "AraCyc" "10" "0.0108671343649072" "2" "0.152594536084933" "plant monoterpene biosynthesis" "AraCyc" "10" "1.87379958386716e-07" "1" "0.0112516543229208" "triacylglycerol biosynthesis" "AraCyc" "10" "0.00815568402464693" "1" "0.126524451409945" "biosynthesis of derivatives of dehydroquinic acid, shikimic acid and chorismic acid" "FunCat" "10" "2.47884977920798e-10" "1" "0.0640466215055935" "biosynthesis of lysine" "FunCat" "10" "1.80137048117097e-06" "1" "0.09899309150833" "electron transport and membrane-associated energy conservation " "FunCat" "10" "0.00246669336518812" "1" "0.265757786724980" "metabolism of the aspartate family" "FunCat" "10" "0.000894460418453341" "1" "0.222155535749255" "Lysine biosynthesis" "KEGG" "10" "0.0098535372833765" "1" "0.338332888421918" "One carbon pool by folate" "KEGG" "10" "0.0087225067682967" "2" "0.156029008110058" "Phe/Tyr biosynthesis" "LitPath" "10" "0" "1" "0" "Tyr biosynthesis" "LitPath" "10" "0" "1" "0" "brassinosteroid metabolism" "TAIR-GO" "9" "2.77308178433064e-11" "1" "0.00364594124846874" "cellular response to sulfate starvation" "TAIR-GO" "9" "2.65656155220031e-08" "1" "0.00364594124846874" "glucosinolate catabolism" "TAIR-GO" "9" "2.65656155220031e-08" "1" "0.00364594124846874" "glycolysis" "TAIR-GO" "9" "2.65656155220031e-08" "1" "0.00364594124846874" "methylglyoxal catabolism" "TAIR-GO" "9" "1.32831841267300e-08" "1" "0.00364594124846874" "pollen germination" "TAIR-GO" "9" "1.57521178705865e-06" "1" "0.0105027649732789" "brassinosteroid degradation" "LitPath" "9" "1.68053672665355e-07" "1" "0.0289771962064636" "Protein prenylation" "BioPath" "8" "0.0183443299097607" "3" "0.00768210188084477" "Sequestration of phenylpropanoids (cytosol --> vacuole)" "BioPath" "8" "7.43052046537463e-06" "1" "0.0175738345130583" "Tic apparatus" "BioPath" "8" "0.00397627063767175" "2" "0.0778715821732369" "chloroplast organization and biogenesis" "TAIR-GO" "8" "2.01073944294299e-05" "2" "0.00379801655079543" "fatty acid elongation" "TAIR-GO" "8" "0.00104877127595195" "1" "0.0626275400401804" "L-ascorbic acid biosynthesis" "TAIR-GO" "8" "1.23180929757371e-08" "1" "0.00364594124846874" "maintenance of dormancy" "TAIR-GO" "8" "0" "1" "0" "regulation of cell shape" "TAIR-GO" "8" "0" "1" "0" "wax biosynthesis" "TAIR-GO" "8" "0.00445403806931815" "1" "0.0626275400401804" "coenzyme A biosynthesis" "AraCyc" "8" "9.7455504208138e-08" "2" "0.00438230805229273" "detoxification" "FunCat" "8" "0" "5" "0" "protein folding and stabilization " "FunCat" "8" "1.02345342017433e-05" "2" "0.0116269165014886" "transported compounds (substrates)" "FunCat" "8" "0" "2" "0" "calcium-mediated signaling" "TAIR-GO" "7" "3.55863684025256e-06" "1" "0.0105027649732789" "histone acetylation" "TAIR-GO" "7" "0" "1" "0" "iron-sulfur cluster assembly" "TAIR-GO" "7" "0" "1" "0" "male gamete generation (sensu Magnoliophyta)" "TAIR-GO" "7" "6.13311370864416e-07" "1" "0.0105027649732789" "pentacyclic triterpenoid biosynthesis" "TAIR-GO" "7" "0.0359425081353836" "1" "0.0802633926269833" "photoreactive repair" "TAIR-GO" "7" "3.01778206561622e-07" "1" "0.00364594124846874" "polysaccharide biosynthesis" "TAIR-GO" "7" "0" "1" "0" "response to pathogenic fungi" "TAIR-GO" "7" "0.000112397765788091" "1" "0.0105027649732789" "secondary metabolism" "TAIR-GO" "7" "0" "1" "0" "transcription factor TFIID complex" "TAIR-GO" "7" "0" "1" "0" "mannosyl-chito-dolichol biosynthesis" "AraCyc" "7" "3.95103657962126e-05" "1" "0.0313755101377564" "cytoskeleton" "FunCat" "7" "0" "1" "0" "directional cell growth (morphogenesis)" "FunCat" "7" "6.36288310912029e-07" "1" "0.0345581685097919" "RNA modification " "FunCat" "7" "8.99206068375528e-06" "1" "0.0124409406635251" "tRNA modification " "FunCat" "7" "0" "1" "0"