"Pathway"	"Pathway.source"	"V3"	"V4"	"V5"	"V6"
"IN ALL DATA SETS"	""	"sum.of.scores"	"sum.of.genes"	""	""
"chlorophyll biosynthesis"	"AraCyc"	"74"	"8"	""	""
"chlorophyll biosynthesis"	"TAIR-GO"	"69"	"7"	""	""
"chlorophyll biosynthesis"	"LitPath"	"69"	"7"	""	""
"ORGAN DATA SET"	"quantDE"	"4.385451"	"maxDE"	"4.9213429"	"ORGAN DATA SET"
"Photosystems "	"BioPath"	"307"	"1.1536540678279e-88"	"47"	"5.62296516524386e-18"
"Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone)"	"BioPath"	"171"	"2.57664436857056e-17"	"21"	"0.000278218009302364"
"C-compound and carbohydrate metabolism"	"FunCat"	"146"	"0.000377679835412454"	"26"	"0.0640325134594554"
"additional photosystem II components"	"BioPath"	"136"	"1.67437772552644e-45"	"19"	"2.87958045822465e-09"
"biogenesis of chloroplast"	"FunCat"	"135"	"1.60711325773629e-47"	"22"	"1.99472629420013e-11"
"Photosynthesis"	"KEGG"	"127"	"1.90784340793945e-106"	"22"	"1.50627819304394e-22"
"photosynthesis"	"FunCat"	"126"	"9.5811325360105e-63"	"20"	"6.13516178044645e-13"
"Photosystem I"	"BioPath"	"119"	"9.04040762627606e-21"	"20"	"1.40206103595026e-06"
"Carbon fixation"	"KEGG"	"100"	"5.14537394044681e-37"	"14"	"1.22694321279395e-06"
"Chlorophyll a/b binding proteins"	"BioPath"	"98"	"8.25243135837433e-47"	"12"	"1.65638884066607e-08"
"glycolysis and gluconeogenesis"	"FunCat"	"95"	"1.22698430913004e-08"	"15"	"0.0147858836060252"
"transport "	"FunCat"	"85"	"0"	"15"	"0"
"photosystem I"	"TAIR-GO"	"82"	"0"	"10"	"0"
"Folding, Sorting and Degradation"	"KEGG"	"76"	"8.2746766374547e-11"	"11"	"0.0125675536545573"
"photosystem II"	"TAIR-GO"	"66"	"0"	"8"	"0"
"Chlorophyll biosynthesis and breakdown"	"BioPath"	"65"	"4.08922914308216e-06"	"8"	"0.0152698649655697"
"chlorophyll and phytochromobilin metabolism"	"LitPath"	"65"	"7.7631604817441e-15"	"8"	"0.000654540343080401"
"Calvin cycle"	"AraCyc"	"62"	"1.39289971819536e-22"	"10"	"0.000134547525800031"
"Carotenoid and abscisic acid metabolism"	"LitPath"	"62"	"6.6272171260981e-28"	"8"	"1.08145006132917e-05"
"Pathway for nuclear-encoded, thylakoid-localized proteins"	"BioPath"	"58"	"1.68979783109319e-25"	"7"	"3.62054045608322e-05"
"Photosystem II"	"BioPath"	"57"	"0.000527909408498254"	"8"	"0.0432147844603054"
"Biosynthesis of steroids"	"KEGG"	"56"	"4.99143230237368e-10"	"7"	"0.00293720196824676"
"Carotenoid biosynthesis"	"BioPath"	"52"	"9.24230483372189e-22"	"6"	"8.64582095392516e-05"
"carotenoid biosynthesis"	"AraCyc"	"52"	"9.16864678620813e-32"	"6"	"2.06438199610144e-06"
"photorespiration"	"AraCyc"	"52"	"9.09815163321865e-23"	"13"	"1.22299261290887e-07"
"carotenid biosynthesis"	"LitPath"	"52"	"2.68780654014591e-32"	"6"	"4.04124516620847e-06"
"transport facilitation"	"FunCat"	"49"	"0"	"9"	"0"
"chlorophyll binding"	"TAIR-GO"	"48"	"1.097147067721e-19"	"6"	"0.000222138395500082"
"Protein export"	"KEGG"	"46"	"6.75968396044243e-22"	"6"	"0.000717658146389475"
"Miscellaneous acyl lipid metabolism"	"AcylLipid"	"46"	"2.70524261917469e-06"	"10"	"0.0603648877203436"
"acetate fermentation"	"AraCyc"	"44"	"0.000111661552683622"	"8"	"0.094851089080434"
"chlorophyll biosynthesis"	"AraCyc"	"44"	"2.63514891618105e-05"	"5"	"0.241233443708662"
"gluconeogenesis"	"AraCyc"	"44"	"3.24096448922073e-07"	"7"	"0.0257330442126026"
"Porphyrin and chlorophyll metabolism"	"KEGG"	"43"	"1.61251470734016e-12"	"5"	"0.00274096963142768"
"Pentose phosphate pathway"	"KEGG"	"42"	"6.51599698673817e-12"	"6"	"0.0059238003228454"
"fructose degradation (anaerobic)"	"AraCyc"	"40"	"0.000458734059514403"	"7"	"0.133038636254828"
"glycine biosynthesis I"	"AraCyc"	"40"	"1.96372004375793e-11"	"10"	"0.000445088082851135"
"glycolysis IV"	"AraCyc"	"40"	"0.000536077286164154"	"7"	"0.142034338763559"
"sorbitol fermentation"	"AraCyc"	"40"	"0.00170053950018057"	"7"	"0.160901964436324"
"superpathway of serine and glycine biosynthesis II"	"AraCyc"	"40"	"8.65792369233418e-23"	"10"	"2.57726292483795e-07"
"Fructose and mannose metabolism"	"KEGG"	"40"	"2.72331514280959e-07"	"7"	"0.00293720196824676"
"chlorophyll biosynthesis"	"TAIR-GO"	"39"	"9.00095656828734e-09"	"4"	"0.0158715888513943"
"chlorophyll biosynthesis"	"LitPath"	"39"	"1.00522261523695e-19"	"4"	"0.000286611679248788"
"Chloroplastic protein turnover"	"BioPath"	"38"	"1.87584972493280e-19"	"8"	"9.32564415571437e-07"
"energy"	"FunCat"	"38"	"0"	"5"	"0"
"serine-isocitrate lyase pathway"	"AraCyc"	"36"	"0.00047232649011063"	"6"	"0.0670659651568682"
"photosystem I reaction center"	"BioPath"	"32"	"1.07003304565153e-19"	"7"	"3.9800034873219e-07"
"ATP-dependent proteolysis"	"TAIR-GO"	"32"	"1.03071069547764e-19"	"8"	"1.31925911120336e-07"
"Glucosyltransferases for benzoic acids"	"BioPath"	"30"	"0.00196130480552475"	"3"	"0.0656710963331816"
"mRNA processing in chloroplast"	"BioPath"	"30"	"1.86804881998525e-12"	"5"	"0.00161984112697206"
"SRP (signal recognition particle)-dependent pathway for integral membrane proteins"	"BioPath"	"30"	"5.29643166464916e-13"	"3"	"0.00277962063529181"
"respiration"	"FunCat"	"30"	"3.51479758653208e-09"	"4"	"0.00396110924684546"
"Protein folding and associated processing"	"KEGG"	"30"	"1.19882598121224e-10"	"5"	"0.00223147671565151"
"Glucosinolate Metabolism"	"LitPath"	"30"	"0.000407502481041278"	"3"	"0.059784087163955"
"IPP (isopentenyl diphosphate) and DMAPP (dimethylallyl diphosphat) biosynthesis"	"LitPath"	"30"	"1.12200186793828e-05"	"4"	"0.0175692595405093"
"MEP (methylerythritol P) pathway, plastids"	"LitPath"	"30"	"5.90563956918394e-16"	"4"	"0.000286611679248788"
"ClpP protease complex "	"BioPath"	"28"	"5.53293689687461e-19"	"7"	"3.9800034873219e-07"
"photorespiration"	"TAIR-GO"	"28"	"7.17807496332559e-23"	"4"	"1.90148648937033e-05"
"formaldehyde assimilation I (serine pathway)"	"AraCyc"	"28"	"0.000138755903245082"	"5"	"0.0459460342039598"
"Glyoxylate and dicarboxylate metabolism"	"KEGG"	"28"	"9.15115317809396e-07"	"5"	"0.00333293795594682"
"Nitrogen metabolism"	"KEGG"	"28"	"0.00284415570140886"	"5"	"0.00668288145542197"
"light harvesting complex"	"BioPath"	"26"	"1.01103752404452e-11"	"3"	"0.00277962063529181"
"photosystem II type I  chlorophyll a /b binding protein"	"BioPath"	"26"	"2.40633754607214e-16"	"3"	"0.000227448273316961"
"aerobic respiration"	"FunCat"	"26"	"7.74492127166473e-07"	"3"	"0.0231399463916981"
"degradation "	"FunCat"	"25"	"1.07180327232252e-05"	"5"	"0.0116886545304780"
"protein degradation "	"FunCat"	"25"	"6.38772581224982e-09"	"5"	"0.0021658492800541"
"Early light-inducible proteins"	"BioPath"	"24"	"1.66770638637304e-09"	"3"	"0.00585826248509787"
"photosystem I subunit precursor"	"BioPath"	"24"	"1.08266951519410e-20"	"4"	"2.77438792603393e-05"
"photosynthesis"	"TAIR-GO"	"24"	"0.0140023630095565"	"4"	"0.0695630868471587"
"acetyl-CoA assimilation"	"AraCyc"	"24"	"0.0145511803497888"	"4"	"0.111564319473555"
"isopentenyl diphosphate biosynthesis -- mevalonate-independent"	"AraCyc"	"24"	"1.71743289262822e-15"	"3"	"0.000553238834927855"
"assimilation of ammonia, metabolism of the glutamate group"	"FunCat"	"24"	"0.00235321474378632"	"3"	"0.0708953878794788"
"Ascorbate and aldarate metabolism"	"KEGG"	"24"	"0.000126873759450620"	"3"	"0.0439568482073456"
"electron transport"	"TAIR-GO"	"22"	"0.0344233933682881"	"3"	"0.188926901058038"
"photosynthetic electron transport"	"TAIR-GO"	"22"	"2.08521182582276e-11"	"3"	"0.00209329696924703"
"mannitol degradation"	"AraCyc"	"22"	"1.31458716802102e-05"	"4"	"0.0464532635576178"
"phenylalanine degradation I"	"AraCyc"	"22"	"0.00266629175431903"	"5"	"0.0184517525886725"
"sorbitol degradation"	"AraCyc"	"22"	"2.64432461342376e-05"	"4"	"0.0538548809841431"
"C-compound and carbohydrate utilization "	"FunCat"	"22"	"0"	"3"	"0"
"pentose-phosphate pathway "	"FunCat"	"22"	"0.000279464399716485"	"3"	"0.0708953878794788"
"Tryptophan metabolism"	"KEGG"	"22"	"0.000195843658006926"	"4"	"0.0349743089255146"
"response to water deprivation"	"TAIR-GO"	"21"	"0"	"3"	"0"
"lactose degradation IV"	"AraCyc"	"21"	"2.07430480080273e-18"	"5"	"1.75069937850938e-06"
"ATP synthase components"	"BioPath"	"20"	"0.000459872818815591"	"3"	"0.0259778191394536"
"Transcriptional regulators (chloroplast)"	"BioPath"	"20"	"0"	"2"	"0"
"Translation (chloroplast)"	"BioPath"	"20"	"9.49005736484967e-08"	"4"	"0.000470639247937253"
"chloroplast thylakoid membrane protein import"	"TAIR-GO"	"20"	"3.44765145596538e-11"	"2"	"0.00544682979137031"
"chloroplastic endopeptidase Clp complex"	"TAIR-GO"	"20"	"8.89239860641809e-15"	"5"	"1.35209878516484e-05"
"cytochrome b6f complex"	"TAIR-GO"	"20"	"8.13420802836984e-10"	"2"	"0.0228407416563676"
"pentose-phosphate shunt"	"TAIR-GO"	"20"	"0.000137876581371538"	"3"	"0.0395755451071078"
"photosynthetic water oxidation"	"TAIR-GO"	"20"	"0"	"2"	"0"
"positive regulation of transcription"	"TAIR-GO"	"20"	"2.87419247010687e-14"	"2"	"0.00148812188334065"
"regulation of transcription"	"TAIR-GO"	"20"	"0"	"2"	"0"
"ammonia assimilation cycle"	"AraCyc"	"20"	"5.25112070703329e-07"	"2"	"0.0305036923064118"
"glutamine biosynthesis I"	"AraCyc"	"20"	"5.08627714515406e-08"	"2"	"0.0143541989347664"
"glyoxylate cycle"	"AraCyc"	"20"	"0.0166057775060895"	"3"	"0.109774195168145"
"nitrate assimilation pathway"	"AraCyc"	"20"	"1.91351591559480e-05"	"2"	"0.0410220275102834"
"metabolism of energy reserves (e.g. glycogen, trehalose)"	"FunCat"	"20"	"0"	"3"	"0"
"nitrogen and sulfur metabolism"	"FunCat"	"20"	"0.0415064230930633"	"2"	"0.192634002777640"
"Fluorene degradation"	"KEGG"	"20"	"3.58456644056391e-06"	"2"	"0.0445879338928367"
"gamma-Hexachlorocyclohexane degradation"	"KEGG"	"20"	"3.7415076098261e-05"	"2"	"0.0615526907772358"
"Methane metabolism"	"KEGG"	"20"	"0.0493635174945722"	"5"	"0.277889689562133"
"calmodulin binding"	"TAIR-GO"	"19"	"0.000227023689101517"	"3"	"0.0521728646407022"
"photosystem II (sensu Viridiplantae)"	"TAIR-GO"	"19"	"3.54305827731560e-12"	"2"	"0.00544682979137031"
"jasmonic acid biosynthesis"	"AraCyc"	"19"	"0.00639583878842281"	"3"	"0.0519424188126538"
"Oxygen-evolving enhancer protein"	"BioPath"	"18"	"1.41102253074169e-08"	"3"	"0.00102626584954345"
"Thylakoid biogenesis and photosystem assembly"	"BioPath"	"18"	"0.00213733699156836"	"2"	"0.0444695623514157"
"carotene biosynthesis"	"TAIR-GO"	"18"	"3.19972894585009e-12"	"2"	"0.00148812188334065"
"nonphotochemical quenching"	"TAIR-GO"	"18"	"0"	"2"	"0"
"protein biosynthesis"	"TAIR-GO"	"18"	"0"	"3"	"0"
"glyceraldehyde 3-phosphate degradation"	"AraCyc"	"18"	"0.00317754863840692"	"3"	"0.109774195168145"
"oxidative branch of the pentose phosphate pathway"	"AraCyc"	"18"	"1.09569023722865e-07"	"3"	"0.0167105441408890"
"sucrose biosynthesis"	"AraCyc"	"18"	"0.00435781631387954"	"3"	"0.0724772825740263"
"xanthophyll cycle"	"AraCyc"	"18"	"0"	"2"	"0"
"electron transport and membrane-associated energy conservation "	"FunCat"	"18"	"4.91282419441942e-09"	"2"	"0.0261676231446193"
"transported compounds (substrates)"	"FunCat"	"18"	"0"	"4"	"0"
"photosystem II assembly"	"TAIR-GO"	"17"	"1.07487698770066e-14"	"2"	"0.00148812188334065"
"photosystem II stabilization"	"TAIR-GO"	"17"	"0"	"2"	"0"
"channel / pore class transport"	"FunCat"	"17"	"2.53368182769415e-06"	"3"	"0.0231399463916981"
"Ion channels"	"KEGG"	"17"	"0.00615553362700833"	"3"	"0.276261964163492"
"Ligand-Receptor Interaction"	"KEGG"	"17"	"0.00820891899879385"	"3"	"0.301126665014876"
"Ferredoxin"	"BioPath"	"16"	"4.99862914584906e-05"	"4"	"0.00228415351474869"
"carotenoid biosynthesis"	"TAIR-GO"	"16"	"0.00143560081860212"	"2"	"0.0537576885589351"
"PSII associated light-harvesting complex II"	"TAIR-GO"	"16"	"0"	"2"	"0"
"response to high light intensity"	"TAIR-GO"	"16"	"1.12196652415929e-10"	"2"	"0.00148812188334065"
"cysteine biosynthesis II"	"AraCyc"	"16"	"0.000676002051527228"	"7"	"0.000279820047854211"
"serine biosynthesis"	"AraCyc"	"16"	"2.65378641162881e-09"	"7"	"0"
"TCA cycle variation II"	"AraCyc"	"16"	"0.0012050370589056"	"3"	"0.0430495262658291"
"chlorophyll and phyochromobilin biosynthesis"	"LitPath"	"16"	"0.00274444416705057"	"3"	"0.0209446801883907"
"abscisic acid biosynthesis"	"TAIR-GO"	"15"	"0.00592879348296042"	"2"	"0.0970563147634651"
"Delta-pH pathway"	"BioPath"	"14"	"6.15199671067246e-08"	"2"	"0.00185960023461923"
"Sec (secretory) pathway"	"BioPath"	"14"	"1.27899962899995e-09"	"2"	"0.00675605611852605"
"Transcription (chloroplast)"	"BioPath"	"14"	"0.0173571747667742"	"2"	"0.0444695623514157"
"photosynthesis light harvesting"	"TAIR-GO"	"14"	"0.00186497417426087"	"2"	"0.0537576885589351"
"photosynthesis light harvesting in photosystem I"	"TAIR-GO"	"14"	"0.000207272212006161"	"2"	"0.0366361491163142"
"photosystem II antenna complex"	"TAIR-GO"	"14"	"6.77115005495595e-11"	"2"	"0.00148812188334065"
"transcription initiation"	"TAIR-GO"	"14"	"0.00602200648494644"	"2"	"0.0537576885589351"
"ascorbate glutathione cycle"	"AraCyc"	"14"	"0.0229419975796873"	"3"	"0.0350871339042591"
"biosynthesis of glycosides"	"FunCat"	"14"	"1.26500093415410e-13"	"2"	"0.000440416111158031"
"C-compound, carbohydrate anabolism"	"FunCat"	"14"	"0.00961134426676995"	"2"	"0.172873285280713"
"metabolismn of primary metabolic sugars derivatives "	"FunCat"	"14"	"1.26500093415410e-13"	"2"	"0.000440416111158031"
"1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradatio"	"KEGG"	"14"	"2.90790323540964e-06"	"2"	"0.0104747487920641"
"chorismate biosynthesis"	"LitPath"	"14"	"0.0183179510077292"	"2"	"0.0966429049717799"
"galactose degradation I"	"AraCyc"	"13"	"2.71059788579584e-08"	"3"	"0.00120874475083543"
"response to ethylene stimulus"	"TAIR-GO"	"12"	"0.00501685360842751"	"3"	"0.0666933749564254"
"RNA processing"	"TAIR-GO"	"12"	"0"	"2"	"0"
"4-hydroxyproline degradation"	"AraCyc"	"12"	"0.00142102950835528"	"2"	"0.0531136236224419"
"cyanate degradation"	"AraCyc"	"12"	"3.84660459904969e-06"	"2"	"0.0817028263040907"
"accessory proteins of photosynthetic electron transport "	"FunCat"	"12"	"0"	"2"	"0"
"electron / hydrogen transport "	"FunCat"	"12"	"5.55746947805668e-06"	"2"	"0.00740033424555822"
"translation"	"FunCat"	"12"	"0.0178250489039619"	"2"	"0.192634002777640"
"Membrane Transport"	"KEGG"	"11"	"0.0147878218812851"	"2"	"0.114562583497288"
"brassinosteroid biosynthesis"	"BioPath"	"10"	"0.00176056695376967"	"1"	"0.0417694821929858"
"FtsH protease (many homologues / subcellular localization ambiguous)"	"BioPath"	"10"	"0"	"1"	"0"
"Other cell wall metabolism related enzymes"	"BioPath"	"10"	"2.10004721330184e-05"	"1"	"0.0151628942207414"
"Plastocyanin"	"BioPath"	"10"	"2.10004721330184e-05"	"1"	"0.0151628942207414"
"psbP family of thylakoid proteins"	"BioPath"	"10"	"0.000181054613387735"	"3"	"0.00277962063529181"
"Regulatory enzymes"	"BioPath"	"10"	"0.00176056695376967"	"1"	"0.0417694821929858"
"ATP synthesis coupled proton transport"	"TAIR-GO"	"10"	"0.00656229961479769"	"1"	"0.103551092625323"
"cell communication"	"TAIR-GO"	"10"	"0"	"1"	"0"
"cell differentiation"	"TAIR-GO"	"10"	"1.13506463356156e-07"	"2"	"0.00148812188334065"
"cell plate formation (sensu Magnoliophyta)"	"TAIR-GO"	"10"	"2.8099716606492e-06"	"1"	"0.0130861301041749"
"chlorophyll catabolism"	"TAIR-GO"	"10"	"0.000306174499893646"	"1"	"0.0362821465458435"
"chloroplast ATP synthase complex"	"TAIR-GO"	"10"	"2.8099716606492e-06"	"1"	"0.0130861301041749"
"chloroplast-nucleus signaling pathway"	"TAIR-GO"	"10"	"0.000306174499893646"	"1"	"0.0362821465458435"
"cytochrome b6f complex assembly"	"TAIR-GO"	"10"	"0"	"1"	"0"
"enzyme binding"	"TAIR-GO"	"10"	"0"	"1"	"0"
"extrinsic to photosynthetic water oxidation"	"TAIR-GO"	"10"	"0"	"1"	"0"
"glucose metabolism"	"TAIR-GO"	"10"	"0.00656229961479769"	"1"	"0.103551092625323"
"glucosinolate catabolism"	"TAIR-GO"	"10"	"1.41143585075740e-06"	"1"	"0.0130861301041749"
"isoprenoid biosynthesis"	"TAIR-GO"	"10"	"0.0244069507768878"	"1"	"0.103551092625323"
"pentose-phosphate shunt, oxidative branch"	"TAIR-GO"	"10"	"0.00656229961479769"	"1"	"0.103551092625323"
"photoinhibition"	"TAIR-GO"	"10"	"0.000101331121121157"	"1"	"0.0362821465458435"
"photosynthetic electron transport in cytochrome b6/f"	"TAIR-GO"	"10"	"1.17952860152524e-08"	"1"	"0.0130861301041749"
"proton transport"	"TAIR-GO"	"10"	"0.00656229961479769"	"1"	"0.103551092625323"
"response to gravity"	"TAIR-GO"	"10"	"0"	"1"	"0"
"response to stress"	"TAIR-GO"	"10"	"0.00354657405435372"	"1"	"0.0671174633003168"
"RNA binding"	"TAIR-GO"	"10"	"0"	"1"	"0"
"tetrapyrrole binding"	"TAIR-GO"	"10"	"0"	"1"	"0"
"thylakoid membrane organization and biogenesis"	"TAIR-GO"	"10"	"0"	"1"	"0"
"xanthophyll cycle"	"TAIR-GO"	"10"	"0"	"1"	"0"
"xanthophyll metabolism"	"TAIR-GO"	"10"	"0"	"1"	"0"
"brassinosteroid biosynthesis II"	"AraCyc"	"10"	"0.0105212892426977"	"1"	"0.252710556510646"
"glucose and glucose-1-phosphate degradation"	"AraCyc"	"10"	"0.0120018749661016"	"1"	"0.283802871093656"
"glucosinolate biosynthesis from homomethionine"	"AraCyc"	"10"	"0.00434450885401946"	"1"	"0.0553701220694083"
"glucosinolate biosynthesis from phenylalanine"	"AraCyc"	"10"	"0.000621132281803706"	"1"	"0.0350768075798183"
"glycosylglyceride desaturation pathway"	"AraCyc"	"10"	"0.000295756094102305"	"1"	"0.0350768075798183"
"peptidoglycan biosynthesis"	"AraCyc"	"10"	"0.000170866760919690"	"1"	"0.132038940546485"
"phospholipid desaturation pathway"	"AraCyc"	"10"	"0.00434450885401946"	"1"	"0.0553701220694083"
"pyridoxal 5'-phosphate biosynthesis"	"AraCyc"	"10"	"2.59939012494569e-06"	"1"	"0.0553701220694083"
"starch biosynthesis"	"AraCyc"	"10"	"0"	"1"	"0"
"thiamine biosynthesis"	"AraCyc"	"10"	"3.41590826544732e-05"	"1"	"0.078694966676143"
"UDP-N-acetylglucosamine biosynthesis"	"AraCyc"	"10"	"0.00260199255265368"	"1"	"0.104431273772694"
"lipid, fatty acid and isoprenoid metabolism of energy reserves (e.g. glycogen, trehalose)"	"FunCat"	"10"	"0"	"1"	"0"
"1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation"	"KEGG"	"10"	"0.000120935112078505"	"1"	"0.0382854141327454"
"Androgen and estrogen metabolism"	"KEGG"	"10"	"0.000185761924894393"	"1"	"0.0517060019392745"
"Benzoate degradation via hydroxylation"	"KEGG"	"10"	"0.0125872461352724"	"1"	"0.0995690584895684"
"Peptidoglycan biosynthesis"	"KEGG"	"10"	"7.64500073506276e-05"	"1"	"0.0264628629578796"
"abscisic acid biosynthesis"	"LitPath"	"10"	"0.00382142061724314"	"2"	"0.0210519547863784"
"chlorophyll catabolism"	"LitPath"	"10"	"2.87454686595768e-05"	"1"	"0.0183442113889219"
"polyprenyl diphosphate biosynthesis"	"LitPath"	"10"	"0.00032798662405488"	"1"	"0.131604463171878"
"calcium ion transport"	"TAIR-GO"	"9"	"7.19991485812432e-06"	"1"	"0.0130861301041749"
"carbohydrate biosynthesis"	"TAIR-GO"	"9"	"0"	"1"	"0"
"cation transport"	"TAIR-GO"	"9"	"8.1255455794223e-08"	"1"	"0.0130861301041749"
"histidine biosynthesis"	"TAIR-GO"	"9"	"0.000251611391836096"	"1"	"0.0362821465458435"
"myo-inositol biosynthesis"	"TAIR-GO"	"9"	"0"	"1"	"0"
"proteolysis and peptidolysis"	"TAIR-GO"	"9"	"0"	"1"	"0"
"response to light intensity"	"TAIR-GO"	"9"	"0"	"1"	"0"
"sucrose biosynthesis"	"TAIR-GO"	"9"	"0"	"1"	"0"
"alanine degradation III"	"AraCyc"	"9"	"1.51631086270350e-06"	"1"	"0.0185248654794282"
"stress response"	"FunCat"	"9"	"0"	"2"	"0"
"Other ion-coupled transporters"	"KEGG"	"9"	"0.00500788975120464"	"1"	"0.136112397805248"
"Streptomycin biosynthesis"	"KEGG"	"9"	"0.0451610278524754"	"1"	"0.155340743083078"
"photosystem II type II  chlorophyll a /b binding protein"	"BioPath"	"8"	"0.0289202871511817"	"1"	"0.0767829082674456"
"Tic apparatus"	"BioPath"	"8"	"0.0289202871511817"	"2"	"0.0647985212148691"
"hydrogen peroxide catabolism"	"TAIR-GO"	"8"	"0"	"2"	"0"
"photosynthetic electron transport in photosystem I"	"TAIR-GO"	"8"	"0.00125886052842485"	"1"	"0.0362821465458435"
"photosystem I (sensu Viridiplantae)"	"TAIR-GO"	"8"	"0"	"1"	"0"
"photosystem I antenna complex"	"TAIR-GO"	"8"	"0"	"1"	"0"
"response to osmotic stress"	"TAIR-GO"	"8"	"0.00173101771486587"	"1"	"0.0671174633003168"
"xanthophyll biosynthesis "	"TAIR-GO"	"8"	"0"	"1"	"0"
"epicuticular wax biosynthesis"	"AraCyc"	"8"	"9.91006721930354e-05"	"1"	"0.0185248654794282"
"proline biosynthesis I"	"AraCyc"	"8"	"0.000970850150209983"	"3"	"0.00226407474051379"
"accessory proteins of electron transport and membrane-associated energy conservation"	"FunCat"	"8"	"8.89424872281738e-06"	"1"	"0.0165529275676769"
"secondary biosynthesis of derivatives of homoisopentenyl pyrophosphate "	"FunCat"	"8"	"0"	"1"	"0"
"One carbon pool by folate"	"KEGG"	"8"	"0.0203370318493835"	"2"	"0.0371211099380736"
"response to pest, pathogen or parasite"	"TAIR-GO"	"7"	"2.43588466542003e-07"	"1"	"0.0130861301041749"
"STRESS DATA SET"	"quantDE"	"1.636318"	"maxDE"	"3.866803"	"STRESS DATA SET"
"C-compound and carbohydrate metabolism"	"FunCat"	"58"	"2.08671932418274e-09"	"11"	"0.00413742605739446"
"Intermediary Carbon Metabolism"	"BioPath"	"42"	"3.97689522820402e-05"	"7"	"0.0356599512229038"
"Pathway for nuclear-encoded, thylakoid-localized proteins"	"BioPath"	"34"	"1.37593046905674e-29"	"4"	"8.38114844895956e-06"
"Photosystems "	"BioPath"	"32"	"0.00155152154937707"	"4"	"0.115687592095455"
"glycolysis and gluconeogenesis"	"FunCat"	"30"	"2.97347344381284e-06"	"6"	"0.00713763677174366"
"additional photosystem II components"	"BioPath"	"26"	"1.32733051178960e-08"	"3"	"0.0142043845457889"
"Miscellaneous acyl lipid metabolism"	"AcylLipid"	"24"	"4.46920035342677e-05"	"7"	"0.0151550501150913"
"Delta-pH pathway"	"BioPath"	"20"	"2.02846183528052e-30"	"2"	"1.40671059567076e-05"
"Leaf Glycerolipid Biosynthesis in Plastid"	"BioPath"	"20"	"0.00286245818311669"	"2"	"0.162286966511843"
"chloroplast thylakoid membrane protein import"	"TAIR-GO"	"20"	"3.22894904349406e-26"	"2"	"3.33818338501707e-05"
"Carbon fixation"	"KEGG"	"20"	"1.70006273032073e-07"	"3"	"0.0201901514149189"
"Pyruvate metabolism"	"KEGG"	"19"	"5.62818578798473e-06"	"3"	"0.0282219583468117"
"Transcription (chloroplast)"	"BioPath"	"18"	"1.12684513021625e-15"	"2"	"0.000458722026324353"
"transcription initiation"	"TAIR-GO"	"18"	"4.44795385610924e-17"	"2"	"0.000440788342386408"
"phenylalanine degradation I"	"AraCyc"	"18"	"2.74356111656608e-09"	"5"	"0.000150445421281547"
"threonine degradation"	"AraCyc"	"17"	"1.07196376681780e-13"	"4"	"0.000391644525321832"
"formaldehyde assimilation I (serine pathway)"	"AraCyc"	"16"	"6.62235383402011e-07"	"3"	"0.0190539265272143"
"serine-isocitrate lyase pathway"	"AraCyc"	"16"	"0.000125324646479258"	"3"	"0.0520504014229476"
"photosynthesis"	"FunCat"	"16"	"4.21020337084031e-05"	"2"	"0.0535985532661165"
"Folding, Sorting and Degradation"	"KEGG"	"16"	"0.00350809562356377"	"3"	"0.093627957269592"
"Pentose phosphate pathway"	"KEGG"	"16"	"1.37475909506878e-08"	"2"	"0.0278260397027852"
"Photosynthesis"	"KEGG"	"16"	"4.57146134540288e-09"	"2"	"0.0156008849709602"
"Protein export"	"KEGG"	"16"	"3.21696870259523e-11"	"3"	"0.00109231371691407"
"methylglyoxal degradation"	"AraCyc"	"15"	"2.05333296562133e-13"	"3"	"0.000740175123029562"
"Chloroplastic protein turnover"	"BioPath"	"14"	"5.38010825950761e-11"	"2"	"0.00264033741575994"
"TCA cycle variation IV"	"AraCyc"	"14"	"0.000571330915395526"	"3"	"0.0520504014229476"
"TCA cycle variation VII"	"AraCyc"	"14"	"0.0381910436956246"	"3"	"0.178397230371016"
"TCA cycle variation VIII"	"AraCyc"	"14"	"0.00171779644367797"	"3"	"0.0673160983136516"
"transport "	"FunCat"	"14"	"3.55130672382178e-23"	"2"	"7.1442885811722e-06"
"Glutathione metabolism"	"KEGG"	"14"	"4.97933065078945e-06"	"2"	"0.0296281049400991"
"ascorbic acid biosynthesis"	"BioPath"	"12"	"5.26245538154059e-05"	"2"	"0.0136367929332794"
"regulation of transcription"	"TAIR-GO"	"12"	"0"	"2"	"0"
"oxidative branch of the pentose phosphate pathway"	"AraCyc"	"12"	"8.73031337160391e-10"	"2"	"0.00695916699651889"
"isoprenoid biosynthesis "	"FunCat"	"12"	"0.0293100071367443"	"2"	"0.115735408126146"
"lipid, fatty acid and isoprenoid biosynthesis "	"FunCat"	"12"	"0.0109746624679996"	"2"	"0.0839021197693179"
"Valine, leucine and isoleucine degradation"	"KEGG"	"12"	"7.13661930499184e-06"	"2"	"0.0182923312375052"
"FtsH protease (many homologues / subcellular localization ambiguous)"	"BioPath"	"10"	"0"	"1"	"0"
"Plastocyanin"	"BioPath"	"10"	"8.22720255649564e-13"	"1"	"0.000591711599766274"
"SRP (signal recognition particle)-dependent pathway for integral membrane proteins"	"BioPath"	"10"	"2.98125487030955e-07"	"1"	"0.0083276244547876"
"Thylakoid biogenesis and photosystem assembly"	"BioPath"	"10"	"2.28028560142316e-06"	"1"	"0.0114751854261729"
"Transcriptional regulators (chloroplast)"	"BioPath"	"10"	"8.22720255649564e-13"	"1"	"0.000591711599766274"
"cellular response to phosphate starvation"	"TAIR-GO"	"10"	"4.33426278357967e-08"	"1"	"0.01100822807067"
"chlorophyll catabolism"	"TAIR-GO"	"10"	"1.21544153082727e-11"	"1"	"0.00126051836018397"
"cytochrome b6f complex"	"TAIR-GO"	"10"	"7.59668990134683e-10"	"1"	"0.0060558481175257"
"cytochrome b6f complex assembly"	"TAIR-GO"	"10"	"0"	"1"	"0"
"glucose metabolism"	"TAIR-GO"	"10"	"7.59668990134683e-10"	"1"	"0.00409126361924595"
"glycolipid biosynthesis"	"TAIR-GO"	"10"	"2.30265576185793e-10"	"1"	"0.00248765488651776"
"hypersensitive response"	"TAIR-GO"	"10"	"8.88024951983276e-09"	"1"	"0.0060558481175257"
"leucine catabolism"	"TAIR-GO"	"10"	"7.84429420296747e-12"	"1"	"0.00126051836018397"
"lipid biosynthesis"	"TAIR-GO"	"10"	"5.70220144953759e-09"	"1"	"0.00409126361924595"
"pentose-phosphate shunt"	"TAIR-GO"	"10"	"7.01481679993236e-07"	"1"	"0.0246120912276681"
"pentose-phosphate shunt, oxidative branch"	"TAIR-GO"	"10"	"7.59668990134683e-10"	"1"	"0.00409126361924595"
"photosynthesis"	"TAIR-GO"	"10"	"0.000168771895530645"	"1"	"0.0638018501573525"
"photosynthesis, dark reaction"	"TAIR-GO"	"10"	"0"	"1"	"0"
"positive regulation of transcription"	"TAIR-GO"	"10"	"7.84429420296747e-12"	"1"	"0.00126051836018397"
"sulfolipid biosynthesis"	"TAIR-GO"	"10"	"8.87908370293658e-15"	"1"	"0.000425818519262835"
"thylakoid membrane organization and biogenesis"	"TAIR-GO"	"10"	"0"	"1"	"0"
"acetyl-CoA assimilation"	"AraCyc"	"10"	"0.00611873268642225"	"2"	"0.0783651706262445"
"aspartate degradation I"	"AraCyc"	"10"	"0.00343431714227162"	"2"	"0.0470122962824448"
"Calvin cycle"	"AraCyc"	"10"	"0.00664799579710224"	"1"	"0.338476709453103"
"cysteine biosynthesis I"	"AraCyc"	"10"	"0.00878775517946728"	"3"	"0.0331574311942101"
"gluconeogenesis"	"AraCyc"	"10"	"0.0344543486541432"	"2"	"0.168185802309254"
"glycosylglyceride biosynthesis"	"AraCyc"	"10"	"1.30257206844973e-06"	"1"	"0.0186976201132171"
"leucine degradation I"	"AraCyc"	"10"	"0.000851973336277824"	"1"	"0.174225327128493"
"leucine degradation II"	"AraCyc"	"10"	"1.30257206844973e-06"	"1"	"0.0530229157368803"
"mixed acid fermentation"	"AraCyc"	"10"	"0.00377057693223464"	"2"	"0.096712039332383"
"photorespiration"	"AraCyc"	"10"	"0.000512254308283885"	"3"	"0.0210803940339312"
"TCA cycle -- aerobic respiration"	"AraCyc"	"10"	"0.0308429264629238"	"2"	"0.183986947163609"
"TCA cycle variation II"	"AraCyc"	"10"	"1.08625808587851e-05"	"2"	"0.0150917894967317"
"electron transport and membrane-associated energy conservation "	"FunCat"	"10"	"1.95361561719586e-09"	"1"	"0.0124234969210910"
"energy"	"FunCat"	"10"	"7.85982864073655e-15"	"1"	"0.00111693081140224"
"lipid, fatty acid and isoprenoid degradation"	"FunCat"	"10"	"8.34086654104214e-05"	"1"	"0.0968405002294768"
"lipid, fatty acid and isoprenoid metabolism"	"FunCat"	"10"	"0.0150594421610030"	"1"	"0.190905701859576"
"mRNA synthesis "	"FunCat"	"10"	"3.9770845841648e-05"	"1"	"0.0968405002294768"
"pentose-phosphate pathway "	"FunCat"	"10"	"3.39640838967278e-05"	"1"	"0.0623844608142481"
"RNA synthesis "	"FunCat"	"10"	"3.9770845841648e-05"	"1"	"0.0968405002294768"
"transcription"	"FunCat"	"10"	"1.48160319129702e-08"	"1"	"0.0294934587581762"
"transcriptional control"	"FunCat"	"10"	"2.72707043241270e-07"	"1"	"0.0219334820005983"
"Fatty acid metabolism"	"KEGG"	"10"	"0.00141264437874743"	"1"	"0.103963140903622"
"Folate biosynthesis"	"KEGG"	"10"	"3.08113043120086e-08"	"2"	"0.00194657601795437"
"Glycerolipid metabolism"	"KEGG"	"10"	"0.000441358133847349"	"1"	"0.0988427423269482"
"RNA polymerase"	"KEGG"	"10"	"0.000122092208384237"	"1"	"0.136071004305424"
"Transcription"	"KEGG"	"10"	"0.00772981627639269"	"1"	"0.355501594734849"
"metabolism of acyl-lipids in mitochondria"	"AcylLipid"	"10"	"0.000730929354403479"	"1"	"0.140525046001483"
"Synthesis of membrane lipids in plastids"	"AcylLipid"	"10"	"0.00127159507560293"	"1"	"0.0915084651892574"
"chlorophyll and phytochromobilin metabolism"	"LitPath"	"10"	"0.000575039392198959"	"1"	"0.0957629830508004"
"chlorophyll catabolism"	"LitPath"	"10"	"2.43978063223405e-14"	"1"	"0.000710474218872533"
"IPP (isopentenyl diphosphate) and DMAPP (dimethylallyl diphosphat) biosynthesis"	"LitPath"	"10"	"2.89118502599225e-06"	"2"	"0.00310975043963037"
"MEP (methylerythritol P) pathway, plastids"	"LitPath"	"10"	"4.02479958230822e-10"	"2"	"0.000252907099859258"
"methylglyoxal catabolism"	"TAIR-GO"	"9"	"5.85728908670685e-13"	"1"	"0.000425818519262835"
"phenylpropanoid metabolism"	"TAIR-GO"	"9"	"3.90187957333879e-07"	"1"	"0.0060558481175257"
"Chlorophyll a/b binding proteins"	"BioPath"	"8"	"0.0269116518651679"	"1"	"0.0774184886268017"
"Early light-inducible proteins"	"BioPath"	"8"	"7.7411171980775e-06"	"1"	"0.0114751854261729"
"ATP-dependent proteolysis"	"TAIR-GO"	"8"	"8.8476295581955e-07"	"2"	"0.00124311119008745"
"response to ethylene stimulus"	"TAIR-GO"	"8"	"1.25189982644077e-06"	"2"	"0.00262510485561987"
"toxin catabolism"	"TAIR-GO"	"8"	"0.00230680376266006"	"4"	"0.00204385157927029"
"proline biosynthesis I"	"AraCyc"	"8"	"4.38782477265479e-08"	"3"	"6.00044274511132e-05"
"tyrosine degradation"	"AraCyc"	"8"	"3.39511799691834e-06"	"3"	"0.0001713450140563"
"Reductive carboxylate cycle (CO2 fixation)"	"KEGG"	"8"	"7.97469790548671e-05"	"2"	"0.00378399257638195"
"starch degradation"	"AraCyc"	"7"	"0.00151219200001302"	"1"	"0.0793602803389447"
"HORMONE DATA SET"	"quantDE"	"1.033692"	"maxDE"	"1.8885649"	"HORMONE DATA SET"
"Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone)"	"BioPath"	"28"	"7.4319105634864e-12"	"3"	"0.00587776785721353"
"Intermediary Carbon Metabolism"	"BioPath"	"16"	"0.00306771253556559"	"3"	"0.0496913467940073"
"biogenesis of chloroplast"	"FunCat"	"16"	"1.6714026902978e-07"	"2"	"0.00956713743470447"
"ascorbate glutathione cycle"	"AraCyc"	"14"	"8.4987009265911e-12"	"2"	"0.00121996731579177"
"photorespiration"	"AraCyc"	"14"	"6.60001885052546e-10"	"2"	"0.0109436700646412"
"Ascorbate and aldarate metabolism"	"KEGG"	"14"	"2.04646373138460e-10"	"2"	"0.00122799469917808"
"Biosynthesis of steroids"	"KEGG"	"14"	"4.10449872338536e-06"	"2"	"0.00715211633945647"
"Carbon fixation"	"KEGG"	"14"	"4.70829006347357e-06"	"3"	"0.00225387610687684"
"Glutamate metabolism"	"KEGG"	"14"	"2.66553608085052e-07"	"2"	"0.00591909392389898"
"Gluconeogenesis from lipids in seeds"	"BioPath"	"12"	"0.000118946057347995"	"2"	"0.0222025972515997"
"detoxification"	"FunCat"	"12"	"0"	"2"	"0"
"Basal transcription factors"	"KEGG"	"12"	"2.32881947670232e-10"	"2"	"0.00329220092350829"
"Stilbene, coumarine and lignin biosynthesis"	"KEGG"	"12"	"6.50979588624458e-05"	"2"	"0.0540542054678141"
"Transcription"	"KEGG"	"12"	"1.75379478799946e-05"	"2"	"0.0286884928351362"
"Biosynthesis of prenyl diphosphates"	"BioPath"	"10"	"0.00036519033539526"	"1"	"0.0589544835219913"
"Chlorophyll biosynthesis and breakdown"	"BioPath"	"10"	"7.93081181765328e-05"	"1"	"0.0349422831864838"
"Glutathione metabolism"	"BioPath"	"10"	"0.00281442017666755"	"1"	"0.127697227192965"
"chlorophyll biosynthesis"	"TAIR-GO"	"10"	"3.07409406148602e-09"	"1"	"0.00352395925539636"
"fatty acid metabolism"	"TAIR-GO"	"10"	"7.78672897356989e-08"	"1"	"0.0111491369832807"
"glutathione metabolism"	"TAIR-GO"	"10"	"0"	"1"	"0"
"isoprenoid biosynthesis"	"TAIR-GO"	"10"	"4.22521386069678e-14"	"1"	"0.000400520124925631"
"acetyl-CoA assimilation"	"AraCyc"	"10"	"5.77703816836717e-05"	"2"	"0.00924829293656616"
"aspartate degradation I"	"AraCyc"	"10"	"2.84707940261343e-05"	"2"	"0.00513844244638725"
"chlorophyll biosynthesis"	"AraCyc"	"10"	"0.00194824742114918"	"1"	"0.160081433928899"
"formaldehyde assimilation I (serine pathway)"	"AraCyc"	"10"	"2.00369728032415e-05"	"2"	"0.0100750893335823"
"formylTHF biosynthesis"	"AraCyc"	"10"	"5.21875577828628e-08"	"1"	"0.0247516592478733"
"gluconeogenesis"	"AraCyc"	"10"	"0.000537361459663374"	"2"	"0.0233382527069873"
"isopentenyl diphosphate biosynthesis -- mevalonate-independent"	"AraCyc"	"10"	"2.82379812534090e-11"	"1"	"0.00269731322965958"
"mixed acid fermentation"	"AraCyc"	"10"	"3.18918055895032e-05"	"2"	"0.0118544155744953"
"phenylalanine degradation I"	"AraCyc"	"10"	"5.83130578310291e-06"	"2"	"0.00572486873933809"
"serine-isocitrate lyase pathway"	"AraCyc"	"10"	"0.000668035350175975"	"2"	"0.0233382527069873"
"TCA cycle variation II"	"AraCyc"	"10"	"4.06647345600387e-08"	"2"	"0.00146699767534063"
"TCA cycle variation IV"	"AraCyc"	"10"	"0.000381796370138676"	"2"	"0.0233382527069873"
"TCA cycle variation VII"	"AraCyc"	"10"	"0.0139915716786294"	"2"	"0.0709116528975397"
"TCA cycle variation VIII"	"AraCyc"	"10"	"0.000944186885530068"	"2"	"0.0291595428713889"
"detoxification involving cytochrome P450 "	"FunCat"	"10"	"1.99788371389938e-15"	"1"	"0.00328926346248249"
"glycolysis and gluconeogenesis"	"FunCat"	"10"	"0.0282901570091577"	"2"	"0.0528780830264751"
"ionic homeostasis "	"FunCat"	"10"	"0"	"1"	"0"
"isoprenoid biosynthesis "	"FunCat"	"10"	"0.000480450088179596"	"1"	"0.0733233778449466"
"lipid, fatty acid and isoprenoid biosynthesis "	"FunCat"	"10"	"0.000153312254893265"	"1"	"0.057199834379489"
"Fluorene degradation"	"KEGG"	"10"	"8.82369769376244e-09"	"1"	"0.00724067143834407"
"gamma-Hexachlorocyclohexane degradation"	"KEGG"	"10"	"4.10321731056391e-08"	"1"	"0.00927653422786712"
"Glutathione metabolism"	"KEGG"	"10"	"4.16715430748657e-05"	"1"	"0.0512850380225979"
"Pyruvate metabolism"	"KEGG"	"10"	"0.00351166635032012"	"2"	"0.0240900920513947"
"Reductive carboxylate cycle (CO2 fixation)"	"KEGG"	"10"	"3.43214847855743e-08"	"2"	"0.00062710546213627"
"Fatty acid elongation and wax and cutin metabolism"	"AcylLipid"	"10"	"3.37125173983909e-07"	"1"	"0.0671248810691427"
"chlorophyll and phytochromobilin metabolism"	"LitPath"	"10"	"0.00285981195302355"	"1"	"0.0533988769487149"
"chlorophyll biosynthesis"	"LitPath"	"10"	"7.26204462990147e-08"	"1"	"0.00420103541434428"
"fatty acid modulation"	"LitPath"	"10"	"7.67298307268834e-16"	"1"	"0.000121643402365964"
"IPP (isopentenyl diphosphate) and DMAPP (dimethylallyl diphosphat) biosynthesis"	"LitPath"	"10"	"1.92897965601816e-05"	"1"	"0.0207672348282834"
"MEP (methylerythritol P) pathway, plastids"	"LitPath"	"10"	"3.33374250622164e-09"	"1"	"0.00420103541434428"
"additional photosystem II components"	"BioPath"	"8"	"0.00173145604410854"	"1"	"0.0474555219643356"
"Carotenoid biosynthesis"	"BioPath"	"8"	"3.65311361248891e-07"	"1"	"0.00410829793696113"
"Early light-inducible proteins"	"BioPath"	"8"	"1.24445359346604e-09"	"1"	"0.00160373851604996"
"abscisic acid biosynthesis"	"TAIR-GO"	"8"	"1.75274124801292e-09"	"1"	"0.00176890642509029"
"response to osmotic stress"	"TAIR-GO"	"8"	"9.58088306395995e-14"	"1"	"0.000241213957679064"
"response to water deprivation"	"TAIR-GO"	"8"	"0"	"1"	"0"
"sugar mediated signaling"	"TAIR-GO"	"8"	"1.15941561109003e-10"	"1"	"0.00059853411089924"
"xanthophyll biosynthesis "	"TAIR-GO"	"8"	"0"	"1"	"0"
"carotenoid biosynthesis"	"AraCyc"	"8"	"8.4002153227655e-06"	"1"	"0.00781059969066503"
"xanthophyll cycle"	"AraCyc"	"8"	"1.21504723634518e-12"	"1"	"0.000186323059341824"
"carotenid biosynthesis"	"LitPath"	"8"	"1.07899444226464e-05"	"1"	"0.00634242799463703"
"Carotenoid and abscisic acid metabolism"	"LitPath"	"8"	"0.000514544336903112"	"1"	"0.0228168036947408"
"gibberellic acid biosynthesis"	"TAIR-GO"	"7"	"5.58328741668622e-07"	"1"	"0.00215391761291406"
"photomorphogenesis"	"TAIR-GO"	"7"	"2.12384346647344e-13"	"1"	"0.000121059652634395"
"mRNA synthesis "	"FunCat"	"7"	"1.87549344531210e-05"	"1"	"0.0163559090413741"
"RNA synthesis "	"FunCat"	"7"	"1.87549344531210e-05"	"1"	"0.0163559090413741"
"transcription"	"FunCat"	"7"	"4.87703756035397e-08"	"1"	"0.00449464963095184"
"transcriptional control"	"FunCat"	"7"	"4.17968751627393e-07"	"1"	"0.00328926346248249"
"MUTANT DATA SET"	"quantDE"	"1.309424"	"maxDE"	"3.954903327"	"MUTANT DATA SET"
"Phenylpropanoid Metabolism"	"BioPath"	"14"	"6.60986834325836e-08"	"2"	"0.0117798140559684"
"core phenylpropanoid metabolism"	"BioPath"	"10"	"4.88102234235692e-10"	"1"	"0.00738883547180807"
"Thylakoid biogenesis and photosystem assembly"	"BioPath"	"10"	"5.44722029537832e-17"	"1"	"0.000166013454994250"
"cytochrome b6f complex"	"TAIR-GO"	"10"	"2.86755503373611e-17"	"1"	"0.000346723385423400"
"cytochrome b6f complex assembly"	"TAIR-GO"	"10"	"0"	"1"	"0"
"lignin biosynthesis"	"TAIR-GO"	"10"	"1.40551065975629e-13"	"1"	"0.000825363732292112"
"lignin biosynthesis"	"AraCyc"	"10"	"2.64019521127201e-08"	"1"	"0.0238398038131744"
"electron transport and membrane-associated energy conservation "	"FunCat"	"10"	"2.34206760700350e-21"	"1"	"2.22201468914168e-05"
"energy"	"FunCat"	"10"	"5.76649947145827e-27"	"1"	"1.85406099883713e-06"
"transport "	"FunCat"	"10"	"5.76649947145827e-27"	"1"	"1.85406099883713e-06"
"Phenylpropanoid pathway"	"LitPath"	"10"	"5.72231570938898e-07"	"1"	"0.105894766889967"
"beta-Alanine metabolism"	"KEGG"	"9"	"9.51311963868791e-11"	"1"	"0.00252986498628408"
"Nucleotide Metabolism"	"KEGG"	"9"	"3.81118881665800e-06"	"1"	"0.0335112259193278"
"Pantothenate and CoA biosynthesis"	"KEGG"	"9"	"2.16839707062813e-11"	"1"	"0.00252986498628408"
"Pyrimidine metabolism"	"KEGG"	"9"	"6.16998136592362e-09"	"1"	"0.00993387073067897"
"Valine, leucine and isoleucine degradation"	"KEGG"	"8"	"1.33570166694045e-07"	"2"	"0.000281409314265436"