"Pathway"	"Pathway.source"	"Annotation.score"	"p.value.score"	"No.of.genes"	"p.value.genes"
"IN ALL DATA SETS"	""	"sum.of.scores"	"sum.of.genes"	""	""
"ORGAN DATA SET"	"quantDE"	"4.009856"	"maxDE"	"6.5643259"	"ORGAN DATA SET"
"Stilbene, coumarine and lignin biosynthesis"	"KEGG"	"19"	"2.81235536045679e-17"	"3"	"0.000323894697643517"
"Ascorbate and aldarate metabolism"	"KEGG"	"17"	"1.81743228392987e-20"	"2"	"8.13136940425154e-05"
"Fluorene degradation"	"KEGG"	"17"	"1.84868679468417e-24"	"2"	"1.643150045003e-05"
"gamma-Hexachlorocyclohexane degradation"	"KEGG"	"17"	"3.03451443584119e-23"	"2"	"2.44528341646645e-05"
"Leaf Glycerolipid Biosynthesis"	"BioPath"	"10"	"3.69255776036666e-07"	"3"	"0.00101763171723529"
"Leaf Glycerolipid Biosynthesis in Plastid"	"BioPath"	"10"	"3.95763936669203e-12"	"3"	"1.26061043753153e-05"
"fatty acid metabolism"	"TAIR-GO"	"10"	"1.04485004269478e-11"	"1"	"0.00226463925182409"
"detoxification"	"FunCat"	"10"	"0"	"1"	"0"
"detoxification involving cytochrome P450 "	"FunCat"	"10"	"3.05424395167931e-21"	"1"	"0.000733677478985293"
"Fatty acid elongation and wax and cutin metabolism"	"AcylLipid"	"10"	"8.30963457176863e-05"	"1"	"0.232089875014582"
"fatty acid modulation"	"LitPath"	"10"	"2.0845228384262e-20"	"1"	"6.5166108410338e-05"
"Synthesis of fatty acids in plastids"	"AcylLipid"	"8"	"0.000946020935983297"	"2"	"0.0187487446828642"
"brassinosteroid biosynthesis"	"TAIR-GO"	"7"	"1.42671163405313e-09"	"1"	"0.000507143040449882"
"growth"	"TAIR-GO"	"7"	"7.78865667041674e-08"	"1"	"0.00208631840369699"
"leaf morphogenesis"	"TAIR-GO"	"7"	"2.54807860349249e-16"	"1"	"2.33363123655411e-05"
"monopolar cell growth"	"TAIR-GO"	"7"	"0"	"1"	"0"
"steroid biosynthesis"	"TAIR-GO"	"7"	"1.42671163405313e-09"	"1"	"0.000507143040449882"
"biosynthesis of phenylpropanoids"	"FunCat"	"7"	"4.5530877371758e-08"	"1"	"0.0059772057944309"
"biosynthesis of secondary products derived from L-phenylalanine and L-tyrosine"	"FunCat"	"7"	"4.5530877371758e-08"	"1"	"0.0059772057944309"
"brassinosteroid biosynthesis"	"LitPath"	"7"	"1.06722986544636e-05"	"1"	"0.0126909761919842"
"triterpene, sterol, and brassinosteroid metabolism"	"LitPath"	"7"	"0.00314174014383358"	"1"	"0.110929903044796"
"STRESS DATA SET"	"quantDE"	"1.951963"	"maxDE"	"7.693893"	"STRESS DATA SET"
"gibberellic acid biosynthesis"	"TAIR-GO"	"10"	"4.42595042373247e-17"	"1"	"8.54208336035678e-05"
"seed germination"	"TAIR-GO"	"10"	"0"	"1"	"0"
"Diterpenoid biosynthesis"	"KEGG"	"10"	"1.05121788637390e-20"	"1"	"8.66727403180079e-05"
"Gibberellin metabolism"	"LitPath"	"10"	"1.35326096191728e-10"	"1"	"0.00344112183428118"
"giberelin biosynthesis"	"LitPath"	"10"	"2.61517264894905e-12"	"1"	"0.00198937964363037"
"trehalose biosynthesis"	"TAIR-GO"	"9"	"1.10638969672106e-23"	"1"	"1.55787263144940e-06"
"trehalose biosynthesis I"	"AraCyc"	"9"	"1.26259432362621e-11"	"1"	"0.00105950847380405"
"trehalose biosynthesis II"	"AraCyc"	"9"	"4.67766810316302e-13"	"1"	"0.000533964259312498"
"trehalose biosynthesis III"	"AraCyc"	"9"	"3.00200425523676e-15"	"1"	"0.000185763867109383"
"C-compound and carbohydrate metabolism"	"FunCat"	"9"	"0.000104584356351618"	"1"	"0.0379834437296912"
"energy"	"FunCat"	"9"	"9.01852464186088e-24"	"1"	"3.70732796726791e-06"
"metabolism of energy reserves (e.g. glycogen, trehalose)"	"FunCat"	"9"	"2.08150301703247e-28"	"1"	"0"
"HORMONE DATA SET"	"quantDE"	"1.64289"	"maxDE"	"3.9346985"	"HORMONE DATA SET"
"Cell Wall Carbohydrate Metabolism"	"BioPath"	"10"	"0.00036835255543443"	"1"	"0.168444161176948"
"sucrose metabolism"	"BioPath"	"10"	"3.08611900277942e-15"	"1"	"0.00071728475356648"
"tryptophan catabolism"	"TAIR-GO"	"10"	"5.91108534181653e-28"	"1"	"1.55787263144940e-06"
"glucosinolate biosynthesis from tryptophan"	"AraCyc"	"10"	"1.33807544498575e-20"	"1"	"2.06714382771561e-05"
"IAA biosynthesis"	"AraCyc"	"10"	"1.27027300013028e-14"	"1"	"0.000448655277160873"
"IAA biosynthesis I"	"AraCyc"	"10"	"2.39876801069212e-16"	"1"	"0.000245828107294515"
"C-compound and carbohydrate metabolism"	"FunCat"	"10"	"0.00151942776308908"	"1"	"0.172443556043533"
"glycolysis and gluconeogenesis"	"FunCat"	"10"	"1.96681339318855e-06"	"1"	"0.0423434743092336"
"Galactose metabolism"	"KEGG"	"10"	"1.67573398135521e-12"	"1"	"0.00265435139488259"
"Starch and sucrose metabolism"	"KEGG"	"10"	"1.13120038368455e-08"	"1"	"0.0149119588580008"
"Glucosinolate Metabolism"	"LitPath"	"10"	"1.83048815564496e-07"	"1"	"0.0188022538346452"
"secondary metabolism"	"FunCat"	"9"	"5.04175216422169e-09"	"2"	"0.000525249457217054"
"triterpene, sterol, and brassinosteroid metabolism"	"LitPath"	"9"	"0.00109691369235109"	"2"	"0.0358460364186601"
"pentacyclic triterpenoid biosynthesis"	"TAIR-GO"	"7"	"2.70978703072683e-14"	"1"	"4.35314577832234e-05"
"Biosynthesis of steroids"	"KEGG"	"7"	"3.8443314736117e-06"	"1"	"0.00578767877845175"
"triterpene biosynthesis"	"LitPath"	"7"	"6.32909806540928e-08"	"1"	"0.00522019000496499"
"MUTANT DATA SET"	"quantDE"	"2.797579"	"maxDE"	"3.727345241"	"MUTANT DATA SET"
"C-compound and carbohydrate metabolism"	"FunCat"	"42"	"0.00108244284122614"	"5"	"0.243089869821984"
"Ribosome"	"KEGG"	"40"	"5.97979654483554e-06"	"7"	"0.00976247633629126"
"Intermediary Carbon Metabolism"	"BioPath"	"36"	"4.79937780141549e-12"	"4"	"0.0221218876370579"
"glycolysis and gluconeogenesis"	"FunCat"	"36"	"4.82208852425159e-09"	"4"	"0.0377540051908128"
"Glycolysis / Gluconeogenesis"	"KEGG"	"26"	"5.04162924723947e-11"	"3"	"0.0132625335062351"
"Photosystems "	"BioPath"	"22"	"1.39685037590198e-05"	"3"	"0.0235614687683891"
"isoprenoid biosynthesis "	"FunCat"	"19"	"4.82768912474294e-05"	"4"	"0.00262404305327440"
"lipid, fatty acid and isoprenoid biosynthesis "	"FunCat"	"19"	"7.02762377706243e-06"	"4"	"0.00139397008035279"
"acetate fermentation"	"AraCyc"	"18"	"5.64204224831828e-10"	"3"	"0.00132589817792723"
"additional photosystem II components"	"BioPath"	"16"	"5.79838764856471e-08"	"2"	"0.00747265870058368"
"ATP synthase components"	"BioPath"	"16"	"7.37925793792352e-18"	"2"	"0.000120465921278524"
"Gluconeogenesis from lipids in seeds"	"BioPath"	"16"	"5.85720061723458e-06"	"2"	"0.0334210827949998"
"ATP synthesis coupled proton transport"	"TAIR-GO"	"16"	"1.42384319580491e-18"	"2"	"6.52352565117074e-05"
"proton transport"	"TAIR-GO"	"16"	"1.42384319580491e-18"	"2"	"6.52352565117074e-05"
"fructose degradation (anaerobic)"	"AraCyc"	"16"	"1.03668343040694e-08"	"2"	"0.0102122714369083"
"gluconeogenesis"	"AraCyc"	"16"	"9.31564453280016e-10"	"2"	"0.00398305168511024"
"glyceraldehyde 3-phosphate degradation"	"AraCyc"	"16"	"4.4650296199649e-15"	"2"	"0.000553434074631345"
"glycerol degradation II"	"AraCyc"	"16"	"1.39248401709431e-10"	"2"	"0.00398305168511024"
"glycolysis I"	"AraCyc"	"16"	"0.000137005573565697"	"2"	"0.0641427232718862"
"glycolysis IV"	"AraCyc"	"16"	"1.1593684037426e-08"	"2"	"0.0106626071014486"
"sorbitol fermentation"	"AraCyc"	"16"	"2.73841530263546e-08"	"2"	"0.0115976861439900"
"triterpene, sterol, and brassinosteroid metabolism"	"LitPath"	"15"	"3.21766425691208e-07"	"3"	"0.00747685577731856"
"Phytic acid biosynthesis"	"BioPath"	"14"	"1.54421521646197e-11"	"2"	"0.00162140991412731"
"lipases pathway"	"AraCyc"	"14"	"5.38591459923723e-11"	"2"	"0.000800673591556956"
"lipid, fatty acid and isoprenoid degradation"	"FunCat"	"14"	"9.80298073387949e-08"	"2"	"0.00867331745275624"
"Lipid signaling"	"AcylLipid"	"14"	"0.000142196685871318"	"2"	"0.241740643734714"
"Biosynthesis of steroids"	"KEGG"	"13"	"0.00064595665770396"	"2"	"0.0174189605069869"
"triterpene biosynthesis"	"LitPath"	"13"	"6.95003927701855e-16"	"2"	"0.000185171423880544"
"transport "	"FunCat"	"12"	"1.09357364965659e-18"	"2"	"3.89074899113574e-06"
"transport facilitation"	"FunCat"	"12"	"0"	"2"	"3.89074899113574e-06"
"Transcription"	"KEGG"	"11"	"0.00164509163382743"	"2"	"0.0648668554179067"
"response to cold"	"TAIR-GO"	"10.5"	"7.90341959979749e-09"	"2"	"0.000222256116670907"
"core phenylpropanoid metabolism"	"BioPath"	"10"	"0.000845013456457224"	"1"	"0.0805548410722835"
"Transporters required for plastid development"	"BioPath"	"10"	"0"	"1"	"0"
"defense response"	"TAIR-GO"	"10"	"0.000411967810562185"	"1"	"0.0556987867357807"
"glycolysis"	"TAIR-GO"	"10"	"1.16536957422835e-14"	"1"	"0.000365061486636309"
"iron ion homeostasis"	"TAIR-GO"	"10"	"0"	"1"	"0"
"phenylpropanoid biosynthesis"	"TAIR-GO"	"10"	"3.31206524053968e-09"	"1"	"0.00351836584697992"
"proton-transporting ATP synthase, catalytic core (sensu Eukaryota)"	"TAIR-GO"	"10"	"0"	"1"	"0"
"response to heat"	"TAIR-GO"	"10"	"7.02301380777784e-07"	"1"	"0.0213165658661275"
"response to oxidative stress"	"TAIR-GO"	"10"	"1.74259554138874e-12"	"1"	"0.00351836584697992"
"response to stress"	"TAIR-GO"	"10"	"1.80823625841262e-10"	"1"	"0.00213711361079263"
"response to sucrose stimulus"	"TAIR-GO"	"10"	"4.3774763386062e-10"	"1"	"0.00521318632575415"
"response to wounding"	"TAIR-GO"	"10"	"0.000868669189960913"	"1"	"0.0661076549868259"
"Calvin cycle"	"AraCyc"	"10"	"5.98942572040557e-06"	"1"	"0.0304670559339228"
"lignin biosynthesis"	"AraCyc"	"10"	"0.000137787656233427"	"1"	"0.0399178897727520"
"phenylpropanoid pathway, initial reactions"	"AraCyc"	"10"	"8.09402906604045e-12"	"1"	"0.000502549604994456"
"salicylic acid biosynthesis"	"AraCyc"	"10"	"1.99331475196783e-11"	"1"	"0.00075042842101644"
"suberin biosynthesis"	"AraCyc"	"10"	"3.0754535964219e-07"	"1"	"0.00725166096203597"
"biosynthesis of phenylpropanoids"	"FunCat"	"10"	"0.00118646616626964"	"1"	"0.102324139211496"
"biosynthesis of secondary products derived from L-phenylalanine and L-tyrosine"	"FunCat"	"10"	"0.00118646616626964"	"1"	"0.102324139211496"
"cation transport (Na, K, Ca , NH4, etc.) "	"FunCat"	"10"	"3.59790157410245e-13"	"1"	"0.00074945552441752"
"heavy metal ion transport (Cu, Fe, etc.)"	"FunCat"	"10"	"3.69065876476793e-15"	"1"	"0.000252412340799931"
"ion transport "	"FunCat"	"10"	"0"	"1"	"0"
"metabolism of the cysteine - aromatic group"	"FunCat"	"10"	"9.47476257872924e-07"	"1"	"0.0104609211260939"
"photosynthesis"	"FunCat"	"10"	"0.0257788256532425"	"1"	"0.156280337139438"
"transported compounds (substrates)"	"FunCat"	"10"	"0"	"1"	"0"
"Alkaloid biosynthesis I"	"KEGG"	"10"	"5.93957344439393e-06"	"1"	"0.0282676882009025"
"Alkaloid biosynthesis II"	"KEGG"	"10"	"7.40930256383502e-10"	"1"	"0.00381441118446878"
"Butanoate metabolism"	"KEGG"	"10"	"7.80136348821e-06"	"1"	"0.0358827586124731"
"Carbon fixation"	"KEGG"	"10"	"0.0149629745664233"	"1"	"0.184557296699706"
"Glyoxylate and dicarboxylate metabolism"	"KEGG"	"10"	"2.25539554383726e-05"	"1"	"0.0441944585561819"
"Nitrogen metabolism"	"KEGG"	"10"	"0.00107260958645594"	"1"	"0.0562616548046371"
"Phenylalanine metabolism"	"KEGG"	"10"	"0.00362238945059401"	"1"	"0.283009608874081"
"Pyruvate metabolism"	"KEGG"	"10"	"0.0354074609514234"	"1"	"0.215490168983297"
"Tyrosine metabolism"	"KEGG"	"10"	"0.000384979655418281"	"1"	"0.0833052601194228"
"Valine, leucine and isoleucine biosynthesis"	"KEGG"	"10"	"3.95061683270334e-05"	"1"	"0.0531454167381587"
"Phenylpropanoid pathway"	"LitPath"	"10"	"0.0010621873371774"	"1"	"0.282045357983028"
"transcription initiation"	"TAIR-GO"	"9"	"6.18637382425422e-07"	"1"	"0.0094957922883949"
"Basal transcription factors"	"KEGG"	"9"	"7.40041585133526e-06"	"1"	"0.065980988501828"
"abscisic acid mediated signaling"	"TAIR-GO"	"8"	"2.10240629274356e-08"	"1"	"0.00213711361079263"
"response to salt stress"	"TAIR-GO"	"8"	"4.65255552364385e-09"	"1"	"0.00213711361079263"
"response to water deprivation"	"TAIR-GO"	"8"	"0"	"1"	"0"
"degradation "	"FunCat"	"8"	"0.000817503828593091"	"1"	"0.0642220299018055"
"stress response"	"FunCat"	"8"	"0"	"1"	"0"
"pentacyclic triterpenoid biosynthesis"	"TAIR-GO"	"7"	"4.5059904629548e-05"	"1"	"0.0094957922883949"