"Pathway" "Pathway.source" "V3" "V4" "V5" "V6" "IN ALL DATA SETS" "" "sum.of.scores" "sum.of.genes" "" "" "tryptophan biosynthesis" "TAIR-GO" "372" "48" "" "" "Glutathione metabolism" "BioPath" "236" "35" "" "" "Glutathione metabolism" "KEGG" "228" "35" "" "" "response to pathogenic bacteria" "TAIR-GO" "131" "19" "" "" "toxin catabolism" "TAIR-GO" "99" "22" "" "" "ORGAN DATA SET" "quantDE" "3.421691" "maxDE" "5.0468192" "ORGAN DATA SET" "Biosynthesis of Amino Acids and Derivatives" "BioPath" "44" "2.12953863187563e-19" "6" "5.87358405422118e-05" "Glutathione metabolism" "BioPath" "34" "5.11336125487484e-24" "5" "3.61715665679198e-06" "indoleacetic acid biosynthesis" "TAIR-GO" "28" "5.37816814238127e-46" "3" "7.12252505602736e-08" "IAA biosynthesis" "AraCyc" "28" "9.43281435288738e-42" "3" "1.09087677897975e-07" "IAA biosynthesis I" "AraCyc" "28" "4.66671047982379e-47" "3" "2.79862271236154e-08" "toxin catabolism" "TAIR-GO" "26" "1.12518621006204e-24" "5" "7.77749619637351e-06" "Glutathione metabolism" "KEGG" "26" "6.24791422569329e-21" "5" "1.17168201847772e-06" "glucosinolate biosynthesis from tryptophan" "AraCyc" "20" "2.97578308055413e-40" "2" "6.41340391398023e-08" "Glucosinolate Metabolism" "LitPath" "20" "2.37280943566663e-23" "2" "1.86546407827526e-05" "plant / fungal specific systemic sensing and response " "FunCat" "18" "3.14381630981099e-18" "2" "0.000238649800141876" "plant hormonal regulation" "FunCat" "18" "3.14381630981099e-18" "2" "0.000238649800141876" "Benzoate degradation via CoA ligation" "KEGG" "13" "1.07513595308640e-05" "3" "0.00701096085218079" "Stilbene, coumarine and lignin biosynthesis" "KEGG" "12" "4.02950369898435e-05" "2" "0.0540542054678141" "Glucosyltransferases for benzoic acids" "BioPath" "10" "3.1983788906077e-08" "1" "0.00324777995400733" "Methionin/SAM/ethylene metabolism from cysteine and aspartate" "BioPath" "10" "1.65479023734914e-06" "1" "0.0169174462105448" "sucrose metabolism" "BioPath" "10" "2.3072245716561e-08" "1" "0.00695041610269815" "cellular response to sulfate starvation" "TAIR-GO" "10" "9.84692796988322e-17" "1" "0.000131380591918899" "glucosinolate biosynthesis" "TAIR-GO" "10" "6.83399204766857e-09" "1" "0.00352406410122643" "indole glucosinolate biosynthesis" "TAIR-GO" "10" "0" "1" "0" "response to red light" "TAIR-GO" "10" "0" "1" "0" "response to stress" "TAIR-GO" "10" "1.74027194223859e-12" "1" "0.000777071169825264" "shade avoidance" "TAIR-GO" "10" "0" "1" "0" "tryptophan biosynthesis" "TAIR-GO" "10" "1.25260998226636e-06" "1" "0.0160534702714294" "tryptophan catabolism" "TAIR-GO" "10" "2.16351451772783e-16" "1" "0.000131380591918899" "cysteine biosynthesis I" "AraCyc" "10" "3.42806116034466e-08" "1" "0.0115260038959197" "glucosinolate biosynthesis from phenylalanine" "AraCyc" "10" "1.15365123630055e-15" "1" "0.000101871182864810" "sulfate assimilation III" "AraCyc" "10" "3.44566976834128e-07" "1" "0.00833686515135269" "biosynthesis of phenylpropanoids" "FunCat" "10" "7.47313932993085e-07" "1" "0.0213185138289729" "biosynthesis of secondary products derived from L-phenylalanine and L-tyrosine" "FunCat" "10" "7.47313932993085e-07" "1" "0.0213185138289729" "glycolysis and gluconeogenesis" "FunCat" "10" "0.0259260775558101" "1" "0.185255761509219" "nitrogen and sulfur metabolism" "FunCat" "10" "2.64870948278583e-07" "1" "0.007641156095254" "Ascorbate and aldarate metabolism" "KEGG" "10" "8.29281477401771e-07" "1" "0.0195905620313143" "Cysteine metabolism" "KEGG" "10" "1.04981711137706e-06" "1" "0.0226733128419550" "Fluorene degradation" "KEGG" "10" "5.42776697819098e-09" "1" "0.00724067143834407" "Galactose metabolism" "KEGG" "10" "2.28175375702169e-06" "1" "0.0293927666140969" "gamma-Hexachlorocyclohexane degradation" "KEGG" "10" "2.54155052291650e-08" "1" "0.00927653422786712" "Starch and sucrose metabolism" "KEGG" "10" "0.00324081149355155" "1" "0.138617840512906" "Sulfur metabolism" "KEGG" "10" "1.11242876666166e-06" "1" "0.0153328793380479" "Tryptophan metabolism" "KEGG" "10" "3.21425426351397e-07" "2" "0.00302799312223536" "Lipid signaling" "AcylLipid" "10" "0" "2" "0" "Phenylpropanoid pathway" "LitPath" "10" "2.32399636631348e-05" "1" "0.0371105875020183" "response to pathogenic bacteria" "TAIR-GO" "9" "6.95545724721555e-11" "1" "0.00128588208132578" "Cyanoamino acid metabolism" "KEGG" "9" "1.82537099264877e-07" "1" "0.0195905620313143" "Nitrogen metabolism" "KEGG" "9" "0.000194205156612962" "1" "0.0311829564234042" "Phytic acid biosynthesis" "BioPath" "8" "1.43728433570744e-06" "1" "0.0101194909302734" "abscisic acid mediated signaling" "TAIR-GO" "8" "4.87454663417494e-10" "1" "0.000777071169825264" "response to cold" "TAIR-GO" "8" "2.96484180061332e-08" "1" "0.00266200300890358" "response to salt stress" "TAIR-GO" "8" "1.04491538806972e-10" "1" "0.000777071169825264" "response to water deprivation" "TAIR-GO" "8" "0" "1" "0" "lipases pathway" "AraCyc" "8" "3.04326227612565e-07" "1" "0.00522218247557232" "degradation " "FunCat" "8" "1.5153273029913e-06" "1" "0.0127564165430427" "lipid, fatty acid and isoprenoid degradation" "FunCat" "8" "3.67137894770456e-06" "1" "0.0137212671111176" "stress response" "FunCat" "8" "0" "1" "0" "STRESS DATA SET" "quantDE" "2.489636" "maxDE" "4.784288" "STRESS DATA SET" "Phenylpropanoid Metabolism" "BioPath" "140" "2.41107407957951e-56" "21" "8.91426833976413e-10" "Aromatic amino acid (Phe, Tyr, Trp) metabolism" "BioPath" "106" "1.57557556218268e-80" "15" "6.27226622741185e-13" "Shikimate pathway" "LitPath" "104" "7.62942123873259e-66" "14" "8.58998565491031e-11" "tryptophan biosynthesis" "TAIR-GO" "88" "7.52858517471327e-105" "11" "7.4803890410973e-16" "Trp biosyntesis" "LitPath" "88" "8.12363781267006e-87" "11" "5.28464935841435e-13" "tryptophan biosynthesis" "AraCyc" "78" "3.35954318587877e-89" "10" "1.09454569398153e-12" "Phenylalanine, tyrosine and tryptophan biosynthesis" "KEGG" "76" "9.65524327723605e-47" "10" "3.15432346328013e-08" "response to pathogenic bacteria" "TAIR-GO" "54" "0" "8" "0" "Biosynthesis of Amino Acids and Derivatives" "BioPath" "52" "0.000274455705728298" "8" "0.0484267786444499" "amino acid metabolism" "FunCat" "50" "1.31373483422736e-19" "8" "9.16395905275763e-05" "Gluconeogenesis from lipids in seeds" "BioPath" "49" "1.47524040925646e-17" "6" "0.00308574028788599" "Stilbene, coumarine and lignin biosynthesis" "KEGG" "49" "6.7778006837749e-17" "10" "0.000164490981664739" "Glutathione metabolism" "BioPath" "40" "1.09699269729724e-10" "6" "0.00335513444668973" "Fatty acid metabolism" "KEGG" "38" "6.04507615820024e-15" "4" "0.00323437434246782" "Degradation of storage lipids and straight fatty acids" "AcylLipid" "37" "1.6334964950886e-24" "4" "0.00242263025349110" "Intermediary Carbon Metabolism" "BioPath" "34" "0.0451676812105588" "8" "0.035732049282282" "toxin catabolism" "TAIR-GO" "32" "6.82957690658329e-21" "8" "3.53172344553027e-06" "lignin biosynthesis" "AraCyc" "28" "1.22631777806946e-11" "4" "0.00208358152865166" "Pyruvate metabolism" "KEGG" "28" "0.000522344168395135" "5" "0.0209391049403567" "Glycolysis / Gluconeogenesis" "KEGG" "26" "0.00226000971619794" "4" "0.0826715605409222" "Ascorbate and aldarate metabolism" "KEGG" "25" "3.97230065020886e-10" "3" "0.00619775383855922" "Arginine and proline metabolism" "KEGG" "24" "4.83046501909939e-07" "3" "0.0370177334903267" "Glutathione metabolism" "KEGG" "24" "2.65573998065993e-06" "4" "0.00815627551284223" "core phenylpropanoid metabolism" "BioPath" "22" "4.21683953726096e-05" "3" "0.0398132769840895" "cysteine biosynthesis I" "AraCyc" "22" "4.11836734623878e-10" "4" "0.00119940186672779" "lipid, fatty acid and isoprenoid degradation" "FunCat" "22" "3.69740620225009e-17" "3" "0.00137868637806346" "response to wounding" "TAIR-GO" "20" "1.08505352269590e-07" "2" "0.0253002768354519" "Cysteine metabolism" "KEGG" "20" "1.17660917683877e-06" "2" "0.0467911259664202" "Phenylalanine metabolism" "KEGG" "20" "0.00259230748806647" "6" "0.0155085035627631" "Glucosinolate Metabolism" "LitPath" "20" "0.00263228456986990" "2" "0.0789423078453998" "fatty acid beta oxidation complex" "BioPath" "19" "1.09238646631423e-09" "3" "0.0032296214817903" "IAA biosynthesis" "AraCyc" "19" "2.09412791474052e-13" "2" "0.00172288654927651" "sulfate assimilation III" "AraCyc" "18" "9.13305644374045e-06" "3" "0.00468570428814456" "nitrogen and sulfur metabolism" "FunCat" "18" "2.54172247177897e-11" "3" "0.000419470050731318" "Glycine, serine and threonine metabolism" "KEGG" "18" "0.000131815022048367" "3" "0.0223624562184317" "Pyrimidine metabolism" "KEGG" "18" "3.36190382545992e-05" "2" "0.119602048968758" "beta-Alanine metabolism" "KEGG" "17" "2.61125402946161e-07" "2" "0.0212414337019291" "Fluorene degradation" "KEGG" "17" "2.9786854927252e-08" "2" "0.00946316539757838" "gamma-Hexachlorocyclohexane degradation" "KEGG" "17" "2.97746968864295e-07" "2" "0.0135329768151387" "defense response" "TAIR-GO" "16" "9.48956144328248e-06" "2" "0.0195264505590709" "metabolism of the cysteine - aromatic group" "FunCat" "16" "2.51656016188980e-14" "2" "0.000669613636213959" "Flavonoid and anthocyanin metabolism" "BioPath" "12" "0.0113376337744485" "3" "0.0734915910682408" "aromatic amino acid family biosynthesis" "TAIR-GO" "12" "3.2396037919481e-05" "2" "0.00707006106730097" "aromatic amino acid family biosynthesis, shikimate pathway" "TAIR-GO" "12" "3.50468429809799e-06" "2" "0.00445687416839741" "Propanoate metabolism" "KEGG" "12" "0.00556994694766973" "2" "0.0608690648880091" "chorismate biosynthesis" "LitPath" "12" "0.00304280300080442" "2" "0.0357885474067449" "Methionin/SAM/ethylene metabolism from cysteine and aspartate" "BioPath" "10" "0.0421720593003727" "1" "0.215874907785060" "anthranilate synthase complex" "TAIR-GO" "10" "2.68471497455510e-12" "1" "0.000858387819928619" "cellular response to sulfate starvation" "TAIR-GO" "10" "1.24223586512872e-12" "1" "0.000858387819928619" "fatty acid metabolism" "TAIR-GO" "10" "0.0270316077895480" "1" "0.167249624699329" "leaf senescence" "TAIR-GO" "10" "0" "1" "0" "lignin biosynthesis" "TAIR-GO" "10" "6.28544550459611e-05" "1" "0.0270344688126316" "long-chain fatty acid metabolism" "TAIR-GO" "10" "0.000524195108159645" "1" "0.087875486501099" "nitrogen compound metabolism" "TAIR-GO" "10" "6.19915868904411e-11" "1" "0.00252613774034067" "phenylpropanoid metabolism" "TAIR-GO" "10" "1.51508635897077e-06" "1" "0.0119258041523006" "response to pathogenic fungi" "TAIR-GO" "10" "1.71511922204818e-10" "1" "0.00252613774034067" "response to UV" "TAIR-GO" "10" "0.000412313148703849" "1" "0.0543150111703723" "tryptophan catabolism" "TAIR-GO" "10" "2.68471497455510e-12" "1" "0.000858387819928619" "alanine biosynthesis II" "AraCyc" "10" "0.000161389139733501" "3" "0.00164596272209693" "asparagine biosynthesis I" "AraCyc" "10" "8.47319283965252e-08" "1" "0.00857494508032296" "asparagine degradation I" "AraCyc" "10" "1.58116106224794e-05" "1" "0.0384528134325595" "aspartate biosynthesis and degradation" "AraCyc" "10" "8.06763965047618e-09" "1" "0.00620948482822724" "aspartate degradation I" "AraCyc" "10" "0.00322931476435731" "1" "0.102718243690539" "aspartate degradation II" "AraCyc" "10" "4.83067671804965e-05" "1" "0.0433565348592435" "flavonoid biosynthesis" "AraCyc" "10" "0.000339970709184479" "1" "0.109475210591073" "glucosinolate biosynthesis from phenylalanine" "AraCyc" "10" "3.47693224934851e-09" "1" "0.00255298586627045" "glucosinolate biosynthesis from tryptophan" "AraCyc" "10" "1.03706152764121e-10" "1" "0.00129419265419211" "glutamine degradation III" "AraCyc" "10" "1.26971269625981e-07" "1" "0.0176370073861311" "IAA biosynthesis I" "AraCyc" "10" "8.82978734063514e-07" "1" "0.0143033759002882" "phenylalanine biosynthesis II" "AraCyc" "10" "2.96948072266988e-05" "3" "0.000998655176534525" "biosynthesis of phenylpropanoids" "FunCat" "10" "0.000212992891527417" "1" "0.130937028484305" "biosynthesis of secondary products derived from L-phenylalanine and L-tyrosine" "FunCat" "10" "0.000212992891527417" "1" "0.130937028484305" "energy" "FunCat" "10" "9.55415113716431e-16" "2" "6.12515055461655e-06" "energy conversion and regeneration " "FunCat" "10" "1.1618184114462e-17" "2" "6.12515055461655e-06" "metabolism of the aspartate family" "FunCat" "10" "6.67129192566164e-11" "1" "0.0088731521959751" "nitrogen and sulfur biogenesis of chloroplast" "FunCat" "10" "0" "1" "0" "Alkaloid biosynthesis I" "KEGG" "10" "0.0135377694522681" "1" "0.142197988211686" "Lysine degradation" "KEGG" "10" "0.000333892254867311" "2" "0.0274663373202916" "Novobiocin biosynthesis" "KEGG" "10" "0.000124953710923596" "1" "0.0571418772051134" "Prostaglandin and leukotriene metabolism" "KEGG" "10" "0.0116317323143526" "5" "0.0131290125374347" "metabolism of acyl-lipids in mitochondria" "AcylLipid" "10" "0.00534137878925115" "1" "0.140525046001483" "auxin biosynthesis" "TAIR-GO" "9" "1.18062801294379e-08" "1" "0.00495628762436966" "defense response to fungi" "TAIR-GO" "9" "0" "1" "0" "ethylene mediated signaling pathway" "TAIR-GO" "9" "1.79834935971871e-13" "1" "0.000858387819928619" "jasmonic acid and ethylene-dependent systemic resistance" "TAIR-GO" "9" "2.39580281263174e-11" "1" "0.000858387819928619" "jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway" "TAIR-GO" "9" "0" "1" "0" "Aminosugars metabolism" "KEGG" "9" "0.0007454204781079" "1" "0.13176783813065" "Pantothenate and CoA biosynthesis" "KEGG" "9" "0.00396910777405489" "1" "0.121527577185934" "4-hydroxyproline degradation" "AraCyc" "8" "1.38783252167974e-05" "1" "0.0212647855617868" "arginine degradation IX" "AraCyc" "8" "1.38783252167974e-05" "1" "0.0251731653642889" "proline degradation I" "AraCyc" "8" "0.00215795551257791" "1" "0.0770016000453472" "proline degradation II" "AraCyc" "8" "1.02663340774538e-05" "1" "0.0212647855617868" "detoxification" "FunCat" "8" "0" "4" "0" "1,2-Dichloroethane degradation" "KEGG" "8" "4.15446177995453e-09" "1" "0.00525225164242019" "Bile acid biosynthesis" "KEGG" "8" "0.008706313946594" "1" "0.0829181571024758" "Histidine metabolism" "KEGG" "8" "0.00496068368087292" "1" "0.111498962837533" "Limonene and pinene degradation" "KEGG" "8" "9.16242884123411e-08" "1" "0.0126168857244216" "fatty acid beta-oxidation" "TAIR-GO" "7" "0.000330384744184344" "1" "0.0119258041523006" "indole phytoalexin biosynthesis" "TAIR-GO" "7" "0" "1" "0" "salicylic acid biosynthesis" "TAIR-GO" "7" "1.42945148843623e-08" "1" "0.000858387819928619" "camalexin biosynthesis" "AraCyc" "7" "0" "1" "0" "fatty acid oxidation pathway" "AraCyc" "7" "0.0246181670112245" "1" "0.0593378745337517" "isoleucine degradation I" "AraCyc" "7" "0.0246181670112245" "1" "0.089580788130584" "isoleucine degradation III" "AraCyc" "7" "0.00034822718385568" "1" "0.0251731653642889" "leucine degradation I" "AraCyc" "7" "0.0246181670112245" "1" "0.089580788130584" "leucine degradation II" "AraCyc" "7" "0.00034822718385568" "1" "0.0251731653642889" "valine degradation I" "AraCyc" "7" "0.0210218486314754" "1" "0.159576960500172" "valine degradation II" "AraCyc" "7" "0.000282975221099597" "1" "0.0484793228788721" "camalexin biosynthesis" "LitPath" "7" "0" "1" "0" "HORMONE DATA SET" "quantDE" "0.7810388" "maxDE" "3.1988604" "HORMONE DATA SET" "Phenylpropanoid Metabolism" "BioPath" "87" "8.0320908281719e-33" "13" "9.5332429987616e-07" "tryptophan biosynthesis" "TAIR-GO" "68" "9.09571568009811e-83" "9" "8.60631033123967e-14" "Shikimate pathway" "LitPath" "68" "8.98640947676966e-45" "9" "6.17640205371594e-08" "Trp biosyntesis" "LitPath" "68" "9.48386401121742e-73" "9" "2.08620018289386e-12" "Aromatic amino acid (Phe, Tyr, Trp) metabolism" "BioPath" "64" "4.16455658856986e-45" "9" "2.26247479276909e-08" "tryptophan biosynthesis" "AraCyc" "58" "1.16747968417949e-69" "8" "1.14688786141483e-11" "response to pathogenic bacteria" "TAIR-GO" "54" "0" "8" "0" "Intermediary Carbon Metabolism" "BioPath" "36" "1.01190045197025e-05" "6" "0.0210447809394055" "Phenylalanine, tyrosine and tryptophan biosynthesis" "KEGG" "34" "1.92089647709727e-18" "5" "4.06941151876662e-05" "Glutathione metabolism" "BioPath" "28" "1.64039493740077e-08" "4" "0.00740694161099332" "Fatty acid metabolism" "KEGG" "28" "1.19088340882375e-14" "3" "0.00167419247983574" "Glutathione metabolism" "KEGG" "28" "8.56295122831022e-15" "5" "3.54372362264628e-05" "C-compound and carbohydrate metabolism" "FunCat" "27" "7.72915407333741e-05" "8" "0.00188287942622714" "toxin catabolism" "TAIR-GO" "26" "2.25357656225400e-19" "5" "0.000253927725810449" "Gluconeogenesis from lipids in seeds" "BioPath" "24" "6.61216507687107e-07" "3" "0.0329906014119315" "lipid, fatty acid and isoprenoid degradation" "FunCat" "22" "2.91766930418458e-22" "3" "0.000195019889820467" "Pyruvate metabolism" "KEGG" "22" "8.87851537973459e-06" "3" "0.0240748045874581" "Stilbene, coumarine and lignin biosynthesis" "KEGG" "21" "2.01120411807235e-06" "4" "0.0173817986778146" "Degradation of storage lipids and straight fatty acids" "AcylLipid" "20" "7.20119293886953e-15" "2" "0.0015627912252906" "IAA biosynthesis" "AraCyc" "18" "3.81129979165677e-16" "2" "0.000398308722709391" "Glycolysis / Gluconeogenesis" "KEGG" "18" "0.000610471624135638" "2" "0.114490488563684" "Tryptophan metabolism" "KEGG" "17" "1.53647341322228e-09" "2" "0.0148383790624911" "4-hydroxyproline degradation" "AraCyc" "16" "1.33731859598816e-17" "2" "0.000301442332405376" "arginine degradation IX" "AraCyc" "16" "1.33731859598816e-17" "2" "0.000398308722709391" "lignin biosynthesis" "AraCyc" "16" "5.38919166048526e-07" "2" "0.0179967000567764" "proline degradation I" "AraCyc" "16" "1.73316640153425e-12" "2" "0.00254788009290331" "proline degradation II" "AraCyc" "16" "6.72527368198046e-18" "2" "0.000301442332405376" "amino acid metabolism" "FunCat" "16" "0.000547944346392611" "3" "0.0268446789361401" "cysteine biosynthesis I" "AraCyc" "15" "4.30580403239113e-08" "3" "0.00139672747374555" "Ascorbate and aldarate metabolism" "KEGG" "15" "2.53824497230792e-07" "2" "0.00629034368780543" "Arginine and proline metabolism" "KEGG" "14" "3.73070569915933e-05" "2" "0.0261043975859367" "Citrate cycle (TCA cycle)" "KEGG" "14" "4.59913500911234e-05" "2" "0.024503116166371" "Glycine, serine and threonine metabolism" "KEGG" "14" "1.20337766473945e-05" "2" "0.0173248442904255" "core phenylpropanoid metabolism" "BioPath" "12" "0.00766412005198892" "2" "0.0464404920645066" "Cyanoamino acid metabolism" "KEGG" "11" "2.92943624958894e-06" "2" "0.00629034368780543" "Chloroplastic protein turnover" "BioPath" "10" "4.09022309877006e-08" "1" "0.0188635032460352" "ERD1 protease (ClpC-like)" "BioPath" "10" "0" "1" "0" "fatty acid beta oxidation complex" "BioPath" "10" "4.51776339227118e-05" "1" "0.0588894528362368" "salycilic acid biosynthesis" "BioPath" "10" "5.56055180359502e-11" "1" "0.00188106108927502" "anthranilate synthase complex" "TAIR-GO" "10" "3.33681441598095e-14" "1" "0.000425818519262835" "ATP-dependent proteolysis" "TAIR-GO" "10" "4.284250396429e-09" "1" "0.020782325202491" "fatty acid metabolism" "TAIR-GO" "10" "0.00151901635984726" "1" "0.0944095469931585" "lignin biosynthesis" "TAIR-GO" "10" "1.45385869642328e-06" "1" "0.0139672656328755" "long-chain fatty acid metabolism" "TAIR-GO" "10" "1.49985304815737e-05" "1" "0.0474929756342377" "response to stress" "TAIR-GO" "10" "2.35098489541852e-10" "1" "0.00248765488651776" "response to wounding" "TAIR-GO" "10" "0.00106100831231477" "1" "0.0755774953134171" "metabolism of the cysteine - aromatic group" "FunCat" "10" "5.88466221122616e-10" "1" "0.00521347800267755" "stress response" "FunCat" "10" "0" "1" "0" "metabolism of acyl-lipids in mitochondria" "AcylLipid" "10" "9.27884079532121e-06" "1" "0.0124477978810721" "auxin biosynthesis" "TAIR-GO" "9" "2.45681992958602e-10" "1" "0.00248765488651776" "ethylene biosynthesis" "TAIR-GO" "9" "1.517505921033e-07" "1" "0.01100822807067" "acrylonitrile degradation" "AraCyc" "9" "6.56905282198678e-15" "1" "0.00094420410867744" "aldoxime degradation" "AraCyc" "9" "6.56905282198678e-15" "1" "0.00094420410867744" "IAA biosynthesis I" "AraCyc" "9" "8.57159800475855e-08" "1" "0.0054378992851767" "nitrogen and sulfur utilization " "FunCat" "9" "1.20595192402265e-08" "1" "0.00632724769898452" "Nitrogen metabolism" "KEGG" "9" "0.0296852797297656" "1" "0.0862946907608745" "sulfate assimilation III" "AraCyc" "8" "0.0119068061202947" "2" "0.00817863066791545" "energy" "FunCat" "8" "4.90068612001532e-14" "1" "0.000365202374946534" "energy conversion and regeneration " "FunCat" "8" "2.09054190951043e-15" "1" "0.000365202374946534" "nitrogen and sulfur metabolism" "FunCat" "8" "3.56038965222354e-05" "2" "0.00129889590386375" "1,2-Dichloroethane degradation" "KEGG" "8" "2.02870805086206e-11" "1" "0.00137412792524252" "beta-Alanine metabolism" "KEGG" "8" "0.000598773204377042" "1" "0.0371491043189756" "Bile acid biosynthesis" "KEGG" "8" "0.000135905812424397" "1" "0.0244023291359269" "Butanoate metabolism" "KEGG" "8" "0.00245342405180227" "1" "0.0558607922562429" "Glycerolipid metabolism" "KEGG" "8" "0.0266171012296034" "1" "0.0909797138301211" "Histidine metabolism" "KEGG" "8" "6.89477359252675e-05" "1" "0.0337634935314869" "Limonene and pinene degradation" "KEGG" "8" "4.90270946569574e-10" "1" "0.00336756243457005" "Lysine degradation" "KEGG" "8" "6.29965350774421e-05" "1" "0.0442902752091689" "Propanoate metabolism" "KEGG" "8" "0.00475522582083890" "1" "0.0771596706373277" "Valine, leucine and isoleucine degradation" "KEGG" "8" "0.0136108113687120" "1" "0.100567896029159" "indole phytoalexin biosynthesis" "TAIR-GO" "7" "0" "1" "0" "L-serine biosynthesis" "TAIR-GO" "7" "3.28123006802884e-10" "1" "0.000425818519262835" "camalexin biosynthesis" "AraCyc" "7" "0" "1" "0" "cysteine biosynthesis II" "AraCyc" "7" "4.00783314179063e-05" "1" "0.0341084333898921" "phosphoglycerate dehydrogenase, cysteine biosynthesis II" "AraCyc" "7" "5.90880094666651e-13" "1" "0.000159974343879344" "phosphoglycerate dehydrogenase, serine biosynthesis" "AraCyc" "7" "5.90880094666651e-13" "1" "0.000159974343879344" "serine biosynthesis" "AraCyc" "7" "7.66765443064066e-08" "1" "0.0032244315764354" "Fluorene degradation" "KEGG" "7" "0.00105276172938102" "1" "0.0215633024674318" "gamma-Hexachlorocyclohexane degradation" "KEGG" "7" "0.00266367222637726" "1" "0.0273853208916094" "camalexin biosynthesis" "LitPath" "7" "0" "1" "0" "MUTANT DATA SET" "quantDE" "1.332935" "maxDE" "3.882325337" "MUTANT DATA SET" "Biosynthesis of Amino Acids and Derivatives" "BioPath" "54" "4.75918644926964e-11" "7" "0.0193518326527860" "Glutathione metabolism" "BioPath" "44" "4.27870825772574e-20" "6" "0.000446073823933911" "Phenylpropanoid Metabolism" "BioPath" "43" "8.50743214648149e-07" "7" "0.0234831339709784" "Intermediary Carbon Metabolism" "BioPath" "42" "1.70442839517415e-08" "8" "0.00428826190566175" "Aromatic amino acid (Phe, Tyr, Trp) metabolism" "BioPath" "40" "8.39668335359296e-21" "5" "0.00079906230076101" "tryptophan biosynthesis" "TAIR-GO" "40" "5.43573855150997e-37" "5" "9.20966586241477e-07" "Shikimate pathway" "LitPath" "40" "2.83937157193747e-18" "5" "0.00136888218215847" "Trp biosyntesis" "LitPath" "40" "2.33733262769115e-32" "5" "7.36882309320944e-06" "Glutathione metabolism" "KEGG" "38" "1.38301524064615e-21" "5" "0.000580662172837979" "Glutamate metabolism" "KEGG" "36" "2.84081742258947e-17" "5" "0.000661109374709136" "TCA cycle -- aerobic respiration" "AraCyc" "34" "1.78230229801767e-16" "6" "0.000224542988015755" "tricarboxylic-acid pathway (citrate cycle, Krebs cycle, TCA cycle)" "FunCat" "34" "3.51103770081897e-07" "6" "0.0148622453869003" "Citrate cycle (TCA cycle)" "KEGG" "34" "5.52018852500067e-19" "6" "6.1513649870616e-05" "acetyl-CoA assimilation" "AraCyc" "30" "3.38765519285809e-16" "5" "0.000174066338149167" "TCA cycle variation VII" "AraCyc" "30" "2.40401804916262e-08" "5" "0.0109725675731708" "TCA cycle variation VIII" "AraCyc" "30" "2.97749006616563e-12" "5" "0.00184951833166066" "tryptophan biosynthesis" "AraCyc" "30" "3.9606086741939e-19" "4" "0.000551392015982949" "amino acid metabolism" "FunCat" "30" "0.00170082816653009" "4" "0.127812454077331" "Gluconeogenesis from lipids in seeds" "BioPath" "28" "1.99820935166825e-09" "5" "0.00245169439053268" "glyoxylate cycle" "AraCyc" "26" "4.57661894475813e-15" "4" "0.000300915195577419" "serine-isocitrate lyase pathway" "AraCyc" "26" "6.87917229783911e-10" "4" "0.00681333393180454" "Glyoxylate and dicarboxylate metabolism" "KEGG" "26" "1.10938670014117e-15" "4" "0.000593421179240495" "Phenylalanine, tyrosine and tryptophan biosynthesis" "KEGG" "26" "4.26605130659966e-10" "3" "0.0227418594940825" "Reductive carboxylate cycle (CO2 fixation)" "KEGG" "26" "1.88772910958250e-19" "4" "0.000110035711281623" "Carbon fixation" "KEGG" "22" "1.56181919426738e-05" "4" "0.0238082170354799" "glutathione biosynthesis" "TAIR-GO" "20" "0" "2" "0" "glutathione biosynthesis" "AraCyc" "20" "0" "2" "0" "leucine biosynthesis" "AraCyc" "20" "7.28008323896264e-17" "3" "0.000716813610664659" "C-compound and carbohydrate glyoxylate cycle " "FunCat" "20" "0" "3" "0" "glyoxylate cycle" "FunCat" "20" "0" "3" "0" "transport " "FunCat" "20" "0" "4" "0" "Miscellaneous acyl lipid metabolism" "AcylLipid" "20" "3.97016215542036e-12" "2" "0.0614969029641329" "mixed acid fermentation" "AraCyc" "18" "2.52461776978442e-07" "4" "0.00224231092839298" "development" "TAIR-GO" "16" "3.13532942325848e-05" "2" "0.0448493141740809" "Oxidative phosphorylation" "KEGG" "16" "0.000388615313494626" "4" "0.0369701330517697" "growth" "TAIR-GO" "15" "9.91203424542827e-07" "2" "0.0153133877434676" "toxin catabolism" "TAIR-GO" "15" "2.47894522218348e-08" "4" "0.00281375758071813" "response to pathogenic bacteria" "TAIR-GO" "14" "1.28351603696421e-15" "2" "0.000101939604632803" "Translation factors" "KEGG" "14" "0.0110114706519244" "4" "0.0664310481531606" "electron transport" "TAIR-GO" "12" "5.52280870759716e-06" "3" "0.000819781933893037" "aspartate degradation I" "AraCyc" "12" "0.000807024454754764" "2" "0.0318447326549242" "aspartate degradation II" "AraCyc" "12" "4.93968950476237e-06" "2" "0.00833647314250846" "lignin biosynthesis" "AraCyc" "12" "0.0277800523812184" "4" "0.00618695329842292" "tRNA charging pathway" "AraCyc" "12" "0.000109010392430174" "5" "0.00148373138171699" "transport facilitation" "FunCat" "12" "0" "2" "1.69366685675357e-05" "Alanine and aspartate metabolism" "KEGG" "12" "0.000333960285585255" "2" "0.0428641105106652" "Aminoacyl-tRNA biosynthesis" "KEGG" "12" "5.8141018930985e-06" "5" "0.000508038180510402" "Chlorophyll biosynthesis and breakdown" "BioPath" "10" "0.0254259962410869" "1" "0.148492518688811" "Methionin/SAM/ethylene metabolism from cysteine and aspartate" "BioPath" "10" "0.00217498782686939" "1" "0.127140400740056" "cell death" "TAIR-GO" "10" "4.10986254965461e-10" "1" "0.00286398409132200" "defense response" "TAIR-GO" "10" "0.000618714024750274" "1" "0.0722854372746487" "defense response to pathogenic bacteria, incompatible interaction" "TAIR-GO" "10" "4.10986254965461e-10" "1" "0.00470534708244814" "fatty acid biosynthesis" "TAIR-GO" "10" "6.25017109593157e-05" "1" "0.0428561527970114" "flower development" "TAIR-GO" "10" "7.32950748922566e-10" "1" "0.00470534708244814" "gibberellic acid biosynthesis" "TAIR-GO" "10" "8.18821458168059e-06" "1" "0.0237564305600682" "gibberellic acid mediated signaling" "TAIR-GO" "10" "5.5045707318278e-09" "1" "0.00470534708244814" "response to cadmium ion" "TAIR-GO" "10" "0" "1" "0" "response to salicylic acid stimulus" "TAIR-GO" "10" "0" "1" "0" "response to stress" "TAIR-GO" "10" "3.03611080271650e-10" "1" "0.00286398409132200" "biosynthesis of proto- and siroheme" "AraCyc" "10" "0.034525078717451" "1" "0.304926923358248" "fatty acid oxidation pathway" "AraCyc" "10" "0.00186905826599259" "1" "0.0919744660444422" "gibberellin biosynthesis" "AraCyc" "10" "3.02538764434889e-05" "1" "0.040087740862686" "octane oxidation" "AraCyc" "10" "0.000103576909869268" "1" "0.0283085538745416" "TCA cycle variation IV" "AraCyc" "10" "0.0486286804985277" "2" "0.120851283185359" "aerobic respiration" "FunCat" "10" "0.000134854875704378" "1" "0.0563039942009276" "biosynthesis of derivatives of homoisopentenyl pyrophosphate " "FunCat" "10" "0.000104533123209792" "1" "0.0563039942009276" "biosynthesis of nonprotein amino acids" "FunCat" "10" "2.12498089890967e-12" "1" "0.00387140906825797" "biosynthesis of secondary products derived from primary amino acids" "FunCat" "10" "1.04994972539473e-08" "1" "0.037207867735641" "biosynthesis of vitamins, cofactors, and prosthetic groups" "FunCat" "10" "6.1806002423012e-06" "1" "0.0496161715633098" "degradation " "FunCat" "10" "0.00025447699280785" "1" "0.145443455770771" "degradation of lipids, fatty acids and isoprenoids" "FunCat" "10" "0" "1" "0" "energy" "FunCat" "10" "1.05476418799536e-13" "3" "0" "lipid transport " "FunCat" "10" "1.35946119112305e-10" "1" "0.0168828309420196" "metabolism of the cysteine - aromatic group" "FunCat" "10" "7.93971432871621e-06" "1" "0.0262344525309203" "plant / fungal specific systemic sensing and response " "FunCat" "10" "0.000367441699487419" "1" "0.0858163540430573" "plant hormonal regulation" "FunCat" "10" "0.000367441699487419" "1" "0.0858163540430573" "respiration" "FunCat" "10" "0.000134854875704378" "1" "0.0563039942009276" "transported compounds (substrates)" "FunCat" "10" "0" "1" "0" "Diterpenoid biosynthesis" "KEGG" "10" "0.000130160845219282" "1" "0.0357936491956142" "Fatty acid metabolism" "KEGG" "10" "0.0310020773644370" "1" "0.213678420921862" "Porphyrin and chlorophyll metabolism" "KEGG" "10" "0.0083758340959388" "1" "0.149322689560824" "diterpene biosynthesis" "LitPath" "10" "3.36959954551657e-12" "1" "0.00109913502852103" "Gibberellin metabolism" "LitPath" "10" "0.00354765127449608" "1" "0.109658267417730" "phytochromobilin biosynthesis" "LitPath" "10" "4.41864783993745e-06" "1" "0.0207987907814663" "Phytic acid biosynthesis" "BioPath" "9" "0.000165489005358326" "1" "0.0809579527808496" "pollen germination" "TAIR-GO" "9" "9.22609563647315e-11" "1" "0.00145270470962557" "pollen tube growth" "TAIR-GO" "9" "1.34830589444165e-11" "1" "0.00286398409132200" "aerobic respiration -- electron donors reaction list" "AraCyc" "8" "0.000932471089232084" "2" "0.0203865559559171" "non-phosphorylated glucose degradation" "AraCyc" "8" "0.00229685397856717" "2" "0.0541066573507687" "electron transport and membrane-associated energy conservation " "FunCat" "8" "2.70255097198002e-06" "2" "0.00126999468370974" "Cysteine metabolism" "KEGG" "8" "0.0209038446300065" "2" "0.0299915468434582"