"Pathway" "Pathway.source" "V3" "V4" "V5" "V6" "IN ALL DATA SETS" "" "sum.of.scores" "sum.of.genes" "" "" "Phenylpropanoid Metabolism" "BioPath" "89" "12" "" "" "ORGAN DATA SET" "quantDE" "5.854805" "maxDE" "6.7256616" "ORGAN DATA SET" "Stilbene, coumarine and lignin biosynthesis" "KEGG" "33" "2.40755516860362e-25" "10" "2.14813492909792e-08" "Phenylpropanoid Metabolism" "BioPath" "26" "1.11300586130738e-11" "4" "0.003533028803544" "glycolysis and gluconeogenesis" "FunCat" "20" "1.54658947543454e-09" "3" "0.00817546463243701" "monoterpenoid biosynthesis" "TAIR-GO" "19" "9.92527574645933e-33" "2" "3.06034933613157e-06" "mono-/sesqui-/di-terpene biosynthesis" "LitPath" "19" "2.97139670200893e-10" "2" "0.0223013908511215" "monoterpene biosynthesis" "LitPath" "19" "5.41758039433101e-22" "2" "6.83749442238819e-05" "terpenoid metabolism" "LitPath" "19" "3.29326927825319e-10" "2" "0.0243056327445256" "C-compound and carbohydrate metabolism" "FunCat" "18" "0.0015245257567114" "4" "0.0329039756595289" "Lipid signaling" "AcylLipid" "18" "3.32934158639447e-05" "3" "0.0689199256508756" "Ascorbate and aldarate metabolism" "KEGG" "17" "1.61367585051558e-14" "2" "0.00354805696992157" "Fluorene degradation" "KEGG" "17" "2.20371913691058e-18" "2" "0.000766837332270633" "gamma-Hexachlorocyclohexane degradation" "KEGG" "17" "3.36054841634772e-17" "2" "0.00112590557143384" "detoxification" "FunCat" "16" "0" "4" "0" "Methane metabolism" "KEGG" "16" "1.24055662815071e-11" "8" "4.87285415103388e-07" "Phenylalanine metabolism" "KEGG" "16" "1.73291182877217e-09" "8" "9.05459425504606e-07" "Prostaglandin and leukotriene metabolism" "KEGG" "16" "8.14600209679942e-15" "8" "6.93888566273317e-08" "Intermediary Carbon Metabolism" "BioPath" "14" "0.000109233837769808" "2" "0.0751219859131139" "glyoxylate cycle" "AraCyc" "14" "1.48640306820302e-13" "2" "0.000498052034113852" "TCA cycle variation VII" "AraCyc" "14" "4.34171051962486e-08" "2" "0.0123522009672186" "TCA cycle variation VIII" "AraCyc" "14" "3.27495605161571e-10" "2" "0.00458635434220428" "Glyoxylate and dicarboxylate metabolism" "KEGG" "14" "2.26290185765354e-11" "2" "0.00492164204252104" "Pyruvate metabolism" "KEGG" "14" "5.61942823791212e-06" "2" "0.0610274693322232" "Glucosyltransferases for benzoic acids" "BioPath" "10" "3.35590516312660e-10" "1" "0.00289491848511681" "salycilic acid biosynthesis" "BioPath" "10" "5.2874232436436e-17" "1" "0.000230384537103153" "cell death" "TAIR-GO" "10" "9.07201345554434e-15" "1" "0.000526652889028794" "fatty acid alpha-oxidation" "TAIR-GO" "10" "0" "1" "0" "fatty acid metabolism" "TAIR-GO" "10" "2.29538425409084e-07" "1" "0.0233270935214856" "toxin catabolism" "TAIR-GO" "10" "9.38856072203997e-09" "5" "2.23970089679198e-06" "jasmonic acid biosynthesis" "AraCyc" "10" "1.64389793147005e-09" "1" "0.00676956762599586" "lipoxygenase pathway" "AraCyc" "10" "1.59600713734495e-11" "1" "0.00299711659611260" "detoxification involving cytochrome P450 " "FunCat" "10" "8.54931106610334e-17" "1" "0.00300967996593222" "glyoxylate cycle" "FunCat" "10" "2.79160193946030e-19" "1" "0.000142181863668211" "Fatty acid elongation and wax and cutin metabolism" "AcylLipid" "10" "0.000606767371364163" "1" "0.187404503788746" "fatty acid modulation" "LitPath" "10" "2.64400224620746e-14" "1" "0.000395341057689384" "auxin biosynthesis" "TAIR-GO" "9" "1.73029107529862e-14" "1" "0.000526652889028794" "IAA biosynthesis" "AraCyc" "9" "1.64700102776346e-09" "1" "0.00299711659611260" "monoterpene biosynthesis" "AraCyc" "9" "6.08927019790675e-15" "1" "0.000141665113167328" "plant monoterpene biosynthesis" "AraCyc" "9" "2.98936555507703e-17" "1" "4.74276878324643e-05" "storage protein" "FunCat" "8" "6.25951167971285e-15" "2" "3.02909434945618e-06" "brassinosteroid biosynthesis" "TAIR-GO" "7" "1.93517530757547e-06" "1" "0.00553118567447626" "growth" "TAIR-GO" "7" "7.88232623511883e-05" "1" "0.0215846704801686" "leaf morphogenesis" "TAIR-GO" "7" "5.00386475319754e-13" "1" "0.000264856619182462" "monopolar cell growth" "TAIR-GO" "7" "0" "1" "0" "steroid biosynthesis" "TAIR-GO" "7" "1.93517530757547e-06" "1" "0.00553118567447626" "biosynthesis of phenylpropanoids" "FunCat" "7" "3.71408560527749e-05" "1" "0.0232916673893527" "biosynthesis of secondary products derived from L-phenylalanine and L-tyrosine" "FunCat" "7" "3.71408560527749e-05" "1" "0.0232916673893527" "brassinosteroid biosynthesis" "LitPath" "7" "0.0271744266027812" "1" "0.0662974152313839" "STRESS DATA SET" "quantDE" "1.895272" "maxDE" "7.09755" "STRESS DATA SET" "Glucosyltransferases for benzoic acids" "BioPath" "10" "1.65917651649333e-16" "1" "0.00013239930464379" "Phenylpropanoid Metabolism" "BioPath" "10" "4.42345986505049e-07" "1" "0.0230054427992564" "cell plate formation (sensu Magnoliophyta)" "TAIR-GO" "10" "1.18151852602029e-27" "1" "1.55787263144940e-06" "leucine catabolism" "TAIR-GO" "10" "2.41797880586388e-25" "1" "4.6720290390382e-06" "leucine degradation I" "AraCyc" "10" "3.88511640419748e-18" "1" "0.000103507434803942" "leucine degradation II" "AraCyc" "10" "1.27688219973975e-21" "1" "2.48015760829959e-05" "amino acid metabolism" "FunCat" "10" "0" "1" "0" "Valine, leucine and isoleucine degradation" "KEGG" "10" "0" "1" "0" "metabolism of acyl-lipids in mitochondria" "AcylLipid" "10" "0" "1" "0" "HORMONE DATA SET" "quantDE" "1.155659" "maxDE" "4.7096553" "HORMONE DATA SET" "Phenylpropanoid Metabolism" "BioPath" "43" "6.80631474811335e-14" "6" "0.000756776250314038" "Biosynthesis of Amino Acids and Derivatives" "BioPath" "30" "4.33410349637017e-06" "3" "0.066858554295399" "Glucosyltransferases for benzoic acids" "BioPath" "30" "2.97487934276358e-31" "3" "4.1535071805292e-06" "Glutathione metabolism" "BioPath" "30" "1.07029354716169e-15" "3" "0.00351467446655555" "sulfate assimilation III" "AraCyc" "22" "7.70476120173955e-19" "3" "0.000133694985748651" "nitrogen and sulfur metabolism" "FunCat" "20" "1.71787905470967e-23" "2" "0.000279547624976749" "Stilbene, coumarine and lignin biosynthesis" "KEGG" "19" "2.78573869666786e-13" "3" "0.00504086387315186" "toxin catabolism" "TAIR-GO" "18" "1.09114916255451e-17" "5" "1.55908237384932e-06" "C-compound and carbohydrate utilization " "FunCat" "16" "0" "2" "0" "jasmonic acid biosynthesis" "TAIR-GO" "12" "2.89190466653955e-10" "2" "0.000572880035735575" "cysteine biosynthesis I" "AraCyc" "12" "2.94129975325262e-09" "2" "0.00383908665840507" "jasmonic acid biosynthesis" "AraCyc" "12" "1.71164100812707e-11" "2" "0.000385790625706951" "lignin biosynthesis" "AraCyc" "12" "1.08010493462193e-07" "2" "0.00540951915931457" "phenylalanine degradation I" "AraCyc" "12" "7.51790948376389e-11" "2" "0.00131450327024341" "tyrosine degradation" "AraCyc" "12" "4.98445467913213e-17" "2" "5.93543882856085e-05" "Phenylalanine metabolism" "KEGG" "12" "1.16692480281048e-07" "2" "0.0236037893027205" "Tyrosine metabolism" "KEGG" "12" "4.25412533775612e-09" "2" "0.00275592804577" "Phenylpropanoid pathway" "LitPath" "12" "2.37274909579132e-10" "2" "0.00152238425021599" "Chloroplastic protein turnover" "BioPath" "10" "1.85517794212221e-10" "1" "0.00531570786664643" "core phenylpropanoid metabolism" "BioPath" "10" "0.00100031921574382" "1" "0.0659937438431173" "ERD1 protease (ClpC-like)" "BioPath" "10" "0" "1" "0" "Tocopherol biosynthesis" "BioPath" "10" "2.25552391210207e-11" "1" "0.0008387080114442" "ATP-dependent proteolysis" "TAIR-GO" "10" "6.19013318950024e-13" "1" "0.00416075578143723" "carotenoid biosynthesis" "TAIR-GO" "10" "2.21395382325946e-11" "1" "0.00215307171163213" "cell plate formation (sensu Magnoliophyta)" "TAIR-GO" "10" "3.50058572180662e-18" "1" "7.94515042039193e-05" "cellular response to sulfate starvation" "TAIR-GO" "10" "1.58734604788724e-18" "1" "7.94515042039193e-05" "lignin biosynthesis" "TAIR-GO" "10" "3.07877977664989e-10" "1" "0.00275320518560584" "plastoquinone biosynthesis" "TAIR-GO" "10" "3.50058572180662e-18" "1" "7.94515042039193e-05" "sulfate assimilation" "TAIR-GO" "10" "2.21395382325946e-11" "1" "0.00215307171163213" "vitamin E biosynthesis" "TAIR-GO" "10" "4.13532530978803e-14" "1" "0.000471537884850618" "dissimilatory sulfate reduction" "AraCyc" "10" "2.14710835386648e-12" "1" "0.00135559537456488" "plastoquinone biosynthesis" "AraCyc" "10" "1.14441162924103e-16" "1" "0.000393384149565995" "vitamin E biosynthesis" "AraCyc" "10" "9.88502770406063e-13" "1" "0.00135559537456488" "amino acid metabolism" "FunCat" "10" "0.00137346827361086" "1" "0.151530023033378" "stress response" "FunCat" "10" "0" "1" "0" "Cysteine metabolism" "KEGG" "10" "2.74565452516240e-08" "1" "0.015671667035113" "Glutathione metabolism" "KEGG" "10" "8.57757315199185e-07" "1" "0.0359817749493654" "Sulfur metabolism" "KEGG" "10" "2.91735346830938e-08" "1" "0.0105447047371773" "indole phytoalexin biosynthesis" "TAIR-GO" "7" "0" "1" "0" "camalexin biosynthesis" "AraCyc" "7" "0" "1" "0" "protein modification " "FunCat" "7" "1.60874271203725e-09" "2" "0.000139728442961905" "Ascorbate and aldarate metabolism" "KEGG" "7" "2.03294304295183e-05" "1" "0.0135136548344783" "Fluorene degradation" "KEGG" "7" "5.35207470954647e-07" "1" "0.00494428170776605" "gamma-Hexachlorocyclohexane degradation" "KEGG" "7" "1.62780976372756e-06" "1" "0.00634737870031429" "camalexin biosynthesis" "LitPath" "7" "0" "1" "0" "MUTANT DATA SET" "quantDE" "1.644395" "maxDE" "3.618546918" "MUTANT DATA SET" "Valine, leucine and isoleucine degradation" "KEGG" "15" "4.29516756537004e-21" "3" "6.6868738047372e-07" "metabolism of acyl-lipids in mitochondria" "AcylLipid" "13" "0" "2" "0" "core phenylpropanoid metabolism" "BioPath" "10" "2.00459414886672e-09" "1" "0.00560189402252651" "Phenylpropanoid Metabolism" "BioPath" "10" "0.000310765311433697" "1" "0.0707763746743723" "Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone)" "BioPath" "10" "7.86500106891306e-06" "1" "0.0183498655214534" "Tocopherol biosynthesis" "BioPath" "10" "6.15142970852508e-18" "1" "5.95149342755631e-05" "carotenoid biosynthesis" "TAIR-GO" "10" "5.33326240112348e-15" "1" "0.000402165178405167" "lignin biosynthesis" "TAIR-GO" "10" "8.02063281642076e-14" "1" "0.000516014011239383" "plastoquinone biosynthesis" "TAIR-GO" "10" "6.84283632753134e-22" "1" "1.45401445601944e-05" "vitamin E biosynthesis" "TAIR-GO" "10" "8.81893793148664e-18" "1" "8.68853042407226e-05" "lignin biosynthesis" "AraCyc" "10" "3.18991591461895e-09" "1" "0.00406794667635924" "phenylalanine degradation I" "AraCyc" "10" "5.20935487066541e-12" "1" "0.00153971601844641" "plastoquinone biosynthesis" "AraCyc" "10" "2.94753917735675e-20" "1" "2.70381921235645e-05" "tyrosine degradation" "AraCyc" "10" "2.91788842596443e-17" "1" "0.000201367624084003" "vitamin E biosynthesis" "AraCyc" "10" "2.85200435493321e-16" "1" "9.43020545136586e-05" "Phenylalanine metabolism" "KEGG" "10" "9.11695440610353e-11" "1" "0.0160504851264923" "Tyrosine metabolism" "KEGG" "10" "4.46942718585029e-12" "1" "0.00354119395351758" "Phenylpropanoid pathway" "LitPath" "10" "0" "1" "0" "leucine catabolism" "TAIR-GO" "9" "2.16177027903138e-17" "1" "4.35314577832234e-05" "leucine degradation I" "AraCyc" "9" "1.23696519357257e-10" "1" "0.00121497786194497" "leucine degradation II" "AraCyc" "9" "1.04298438511535e-13" "1" "0.000294648665516002"