"Pathway" "Pathway.source" "V3" "V4" "V5" "V6" "IN ALL DATA SETS" "sum.of.scores" "sum.of.genes" "ORGAN DATA SET" "quantDE" 4.822804 "maxDE" 6.784597 "ORGAN DATA SET" "toxin catabolism" "TAIR-GO" 14 2.10609773059062E-020 3 0.00000350313783671629 "lignin biosynthesis" "AraCyc" 12 0.00000000936067330534754 2 0.00144590139408388 "Glutathione metabolism" "KEGG" 12 0.000000000000156356243759359 2 0.0000937996713376782 "Phenylpropanoid pathway" "LitPath" 12 0 2 0 "Phenylpropanoid Metabolism" "BioPath" 11 0.000292298317458139 2 0.0300464521918077 "Biosynthesis of Amino Acids and Derivatives" "BioPath" 10 0.00161540099001986 1 0.147841565484969 "core phenylpropanoid metabolism" "BioPath" 10 0.00000000998653906959533 1 0.0140513950327849 "Glutathione metabolism" "BioPath" 10 0.000000447859691774014 1 0.031535489729133 "lignin biosynthesis" "TAIR-GO" 10 9.01968425536069E-016 1 0.000277756976894884 "Stilbene, coumarine and lignin biosynthesis" "KEGG" 10 0.00000000398950577043839 1 0.0205142635117475 "hyperosmotic salinity response" "TAIR-GO" 9 2.99397579677992E-015 1 0.000346723385423401 "proline biosynthesis" "TAIR-GO" 9 1.12260453235771E-017 1 0.0000466091434763243 "arginine degradation II" "AraCyc" 9 0.00000000483413714820014 1 0.00426899955174111 "arginine degradation III" "AraCyc" 9 0.00000000000324901489610449 1 0.000927692760369563 "arginine degradation V" "AraCyc" 9 0.00000000000663778393564334 1 0.00168465496989514 "biosynthesis of proto- and siroheme" "AraCyc" 9 0.000000967552031442723 1 0.0190965011160424 "biotin biosynthesis I" "AraCyc" 9 0.000000000000645981010878822 1 0.00140834039599093 "chlorophyll biosynthesis" "AraCyc" 9 0.00000955424821966512 1 0.0298294947133264 "glutamate degradation I" "AraCyc" 9 0.000000000000516971150596336 1 0.000723833203530562 "lysine biosynthesis I" "AraCyc" 9 0.000000000123985727822286 1 0.00341681010438324 "amino acid metabolism" "FunCat" 9 0.0000000376073473060039 1 0.0203880906686789 "Arginine and proline metabolism" "KEGG" 9 0.000000000688274592777317 1 0.00389954790027415 "Urea cycle and metabolism of amino groups" "KEGG" 9 0.00000000000255011663717234 1 0.00127735984414779 "C-compound and carbohydrate utilization " "FunCat" 8 2.95030424113513E-023 2 0 "STRESS DATA SET" "quantDE" 3.846715 "maxDE" 8.582299 "STRESS DATA SET" "Intermediary Carbon Metabolism" "BioPath" 74 8.00710464970478E-015 14 0.0000453263470640497 "C-compound and carbohydrate metabolism" "FunCat" 68 0.000000197201388133382 14 0.00230228401982687 "Phenylpropanoid Metabolism" "BioPath" 66 0.0000000569244565886927 10 0.0127634348732253 "Gluconeogenesis from lipids in seeds" "BioPath" 65 9.52350699746119E-028 8 0.000152441082856484 "Biosynthesis of Amino Acids and Derivatives" "BioPath" 54 0.000757470695086683 6 0.231656473433768 "Citrate cycle (TCA cycle)" "KEGG" 52 3.93582527222084E-025 8 0.0000272870262666964 "Degradation of storage lipids and straight fatty acids" "AcylLipid" 51 1.66899339159021E-031 7 0.0000568225276854428 "tricarboxylic-acid pathway (citrate cycle, Krebs cycle, TCA cycle)" "FunCat" 42 0.00000000067027649721759 7 0.00387734319277771 "Fatty acid metabolism" "KEGG" 40 0.000000000000037632049054757 7 0.0000454757964304734 "Phenylpropanoid pathway" "LitPath" 38 9.87608000119325E-015 7 0.00061897904877817 "fatty acid beta oxidation complex" "BioPath" 37 1.65054547835723E-026 4 0.000387744463931454 "amino acid metabolism" "FunCat" 37 0.0000700163385127059 5 0.0470579398318102 "TCA cycle -- aerobic respiration" "AraCyc" 36 0.0000000000185850880034926 6 0.00272201685639197 "Glutathione metabolism" "KEGG" 36 0.0000000000109425763776028 5 0.00634335709884409 "Glutamate metabolism" "KEGG" 35 0.00000000483500791728255 4 0.0286521274297525 "core phenylpropanoid metabolism" "BioPath" 34 0.000000000080419542843757 5 0.00198553067281072 "acetyl-CoA assimilation" "AraCyc" 32 0.00000000000739729580119367 5 0.00163121389086723 "TCA cycle variation VII" "AraCyc" 32 0.000107336704424172 5 0.0660057532490909 "TCA cycle variation VIII" "AraCyc" 32 0.0000000405804086116455 5 0.0141644945937505 "Arginine and proline metabolism" "KEGG" 32 0.000000000262572049246749 5 0.00634335709884409 "Glyoxylate and dicarboxylate metabolism" "KEGG" 32 0.0000000000000381562597499739 5 0.000728380702097506 "glyoxylate cycle" "AraCyc" 28 0.0000000000180625646798518 4 0.00202659408054568 "serine-isocitrate lyase pathway" "AraCyc" 28 0.00000166058119034595 4 0.0356648976449397 "lignin biosynthesis" "AraCyc" 26 0.0000502598757034524 5 0.00846122771987788 "TCA cycle variation IV" "AraCyc" 26 0.00000410406723914141 4 0.0356648976449397 "Glutathione metabolism" "BioPath" 24 0.00542574590825249 3 0.152816282172212 "lipid, fatty acid and isoprenoid degradation" "FunCat" 24 0.000000000000046219077045307 4 0.000509727302229674 "Glycolysis / Gluconeogenesis" "KEGG" 24 0.0446564768501995 5 0.0907269770174344 "Nucleotide Metabolism" "KEGG" 24 0.0116585345640344 3 0.37215216218568 "Pyruvate metabolism" "KEGG" 24 0.0446564768501995 5 0.0703089238982319 "mixed acid fermentation" "AraCyc" 22 0.00000278001254945201 4 0.0131437076096405 "C-compound and carbohydrate utilization " "FunCat" 22 0 3 0 "Stilbene, coumarine and lignin biosynthesis" "KEGG" 22 0.0237951440019775 3 0.576645837538772 "fatty acid metabolism" "TAIR-GO" 20 0.00000740734578304827 2 0.0610573754446809 "lignin biosynthesis" "TAIR-GO" 20 0.00000000000641251713435479 2 0.00339154587103968 "long-chain fatty acid metabolism" "TAIR-GO" 20 0.000000000748337942345795 2 0.0222317880449285 "toxin catabolism" "TAIR-GO" 20 0.0000000402669567829117 6 0.000989324545768306 "biogenesis of cell wall" "FunCat" 20 0.0000707171549000893 2 0.225546603019158 "biogenesis of chloroplast" "FunCat" 20 0.00488295145389159 3 0.0698010236084633 "Glycan Biosynthesis and Metabolism" "KEGG" 20 0.0204514938940474 4 0.110714221108182 "Propanoate metabolism" "KEGG" 20 0.00000404280381007085 5 0.0010732601563489 "abscisic acid biosynthesis" "TAIR-GO" 19 0.00000000000112633809986261 2 0.00471824523700551 "arginine degradation II" "AraCyc" 18.5 0.00000224540289378754 3 0.00655536121425395 "arginine degradation III" "AraCyc" 18.5 0.00000000000599569982716432 3 0.000294135800020688 "arginine degradation V" "AraCyc" 18.5 0.0000000000233750334456016 3 0.00104857980954804 "IAA biosynthesis" "AraCyc" 18 0.0000000542649834263913 2 0.0113820172096745 "Pantothenate and CoA biosynthesis" "KEGG" 18 0.000000048603788869085 2 0.0450378346340496 "Pyrimidine metabolism" "KEGG" 18 0.00025271894848564 2 0.220046930902597 "fatty acid beta-oxidation" "TAIR-GO" 17 0.00000000000175035836257509 2 0.00087459971132789 "beta-Alanine metabolism" "KEGG" 17 0.00000240240017391879 4 0.00097649968704258 "Reductive carboxylate cycle (CO2 fixation)" "KEGG" 16 0.00000890030606977699 2 0.0450378346340496 "ammonia assimilation cycle" "AraCyc" 14 0.000000710633961733427 2 0.00475953501331462 "glutamine degradation III" "AraCyc" 14 0.0000000227217892884059 2 0.00659594004692291 "assimilation of ammonia, metabolism of the glutamate group" "FunCat" 14 0.0000409524922623691 2 0.0155315109812755 "stress response" "FunCat" 14 0 2 0 "metabolism of acyl-lipids in mitochondria" "AcylLipid" 14 0.00270375609757625 2 0.0727621799757333 "aerobic respiration -- electron donors reaction list" "AraCyc" 12 0.000235015903675654 3 0.011240994158473 "oxidative branch of the pentose phosphate pathway" "AraCyc" 12 0.000000953156056546617 2 0.0143566766571864 "C-compound, carbohydrate catabolism" "FunCat" 12 0.000446431693323784 3 0.0198492289374323 "pentose-phosphate pathway " "FunCat" 12 0.0000385443183738569 2 0.0155315109812755 "transport " "FunCat" 12 7.48519825287676E-017 3 0 "Alkaloid biosynthesis I" "KEGG" 12 0.00676239516300302 2 0.0573809666793951 "Novobiocin biosynthesis" "KEGG" 12 0.0000248677938708523 2 0.0138964303005557 "biotin biosynthesis I" "AraCyc" 11.5 0.00000204946051731747 2 0.00879865785964288 "glutamate degradation I" "AraCyc" 11.5 0.00000161635354608656 2 0.0032710686088833 "Chloroplastic protein turnover" "BioPath" 10 0.00000566007886799039 1 0.0487632747410421 "ERD1 protease (ClpC-like)" "BioPath" 10 0 1 0 "Glucosyltransferases for benzoic acids" "BioPath" 10 0.0054779829517902 1 0.0565242621976487 "Glutamate/glutamine from nitrogen fixation" "BioPath" 10 0.00148742329942592 1 0.0565242621976487 "Prolin/Hydroxyproline from glutamate" "BioPath" 10 0.000002787344982562 1 0.0345652334410555 "salycilic acid biosynthesis" "BioPath" 10 0.0000000106838682747158 1 0.00518430970695412 "Tocopherol biosynthesis" "BioPath" 10 0.000000843888640743251 1 0.00847172198890495 "ATP-dependent proteolysis" "TAIR-GO" 10 0.00000219563549446859 1 0.0589153522170608 "cell death" "TAIR-GO" 10 0.000000192206300237379 1 0.00758981144203659 "ethylene biosynthesis" "TAIR-GO" 10 0.00000591548997572362 1 0.0321956632165647 "fat-soluble vitamin biosynthesis" "TAIR-GO" 10 0 1 0 "fatty acid alpha-oxidation" "TAIR-GO" 10 0 1 0 "glucose metabolism" "TAIR-GO" 10 0.00000033202575188721 1 0.0123502692873399 "glutamine biosynthesis" "TAIR-GO" 10 0 1 0 "hypersensitive response" "TAIR-GO" 10 0.00000331294669046899 1 0.0180881040753458 "leaf senescence" "TAIR-GO" 10 0 1 0 "nitrogen compound metabolism" "TAIR-GO" 10 0.000000000624330584447404 1 0.00388716311529661 "pentose-phosphate shunt" "TAIR-GO" 10 0.0001739736049979 1 0.0690575820277148 "pentose-phosphate shunt, oxidative branch" "TAIR-GO" 10 0.00000033202575188721 1 0.0123502692873399 "peptidyl-proline hydroxylation to 4-hydroxy-L-proline" "TAIR-GO" 10 0.000000000000837262577532616 1 0.00132730748199489 "response to bacteria" "TAIR-GO" 10 0 1 0 "tricarboxylic acid cycle" "TAIR-GO" 10 0.000000000000837262577532616 1 0.00132730748199489 "vitamin E biosynthesis" "TAIR-GO" 10 0.000000192206300237379 1 0.00758981144203659 "arginine degradation IX" "AraCyc" 10 0.0000604134377893883 3 0.00104857980954804 "asparagine biosynthesis I" "AraCyc" 10 0.0000296465262765368 1 0.0307318955610073 "asparagine degradation I" "AraCyc" 10 0.00278589454617481 1 0.12417028107703 "aspartate biosynthesis and degradation" "AraCyc" 10 0.00000344424860155988 1 0.0225535590225161 "aspartate degradation II" "AraCyc" 10 0.0068872062320484 1 0.13823930215486 "glutamine biosynthesis I" "AraCyc" 10 0.000134248469400515 1 0.0307318955610073 "jasmonic acid biosynthesis" "AraCyc" 10 0.0292142915136152 1 0.167307146729317 "lipoxygenase pathway" "AraCyc" 10 0.00128158784462582 1 0.0844815188179763 "nitrate assimilation pathway" "AraCyc" 10 0.00231821281351652 1 0.0607528847880564 "proline degradation I" "AraCyc" 10 0.0146611239271526 3 0.011240994158473 "proline degradation II" "AraCyc" 10 0.0000426983619327858 3 0.000722025879669669 "vitamin E biosynthesis" "AraCyc" 10 0.0000714149442483353 1 0.0307318955610073 "metabolism of the aspartate family" "FunCat" 10 0.0000000174103081645419 1 0.0164872744482835 "nitrogen and sulfur biogenesis of chloroplast" "FunCat" 10 0 1 0 "nitrogen and sulfur metabolism" "FunCat" 10 0.00630385201040764 1 0.0918236904110233 "Peptidoglycan biosynthesis" "KEGG" 10 0.00000105421623231175 1 0.0150979504383557 "abscisic acid biosynthesis" "LitPath" 10 0.0000000248710052852339 1 0.0188022538346452 "Carotenoid and abscisic acid metabolism" "LitPath" 10 0.00149260849872206 1 0.113567997428002 "tocopherol (vitamin E) biosynthesis" "LitPath" 10 0.000000000000210345539644594 1 0.000742893635877853 "Tyr biosynthesis" "LitPath" 10 0 1 0 "auxin biosynthesis" "TAIR-GO" 9 0.0000000915087922217002 1 0.00758981144203659 "auxin mediated signaling pathway" "TAIR-GO" 9 0.0000000118327262799029 1 0.00388716311529661 "auxin metabolism" "TAIR-GO" 9 0.000000254190502375852 1 0.0123502692873399 "defense response to fungi" "TAIR-GO" 9 0 1 0 "ethylene mediated signaling pathway" "TAIR-GO" 9 0.00000000000156849008759851 1 0.00132730748199489 "hyperosmotic salinity response" "TAIR-GO" 9 0.000163861013337839 1 0.0493522024777135 "jasmonic acid and ethylene-dependent systemic resistance" "TAIR-GO" 9 0.000000000201806957711133 1 0.00132730748199489 "jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway" "TAIR-GO" 9 0 1 0 "molybdenum incorporation into molybdenum-molybdopterin complex" "TAIR-GO" 9 0 1 0 "proline biosynthesis" "TAIR-GO" 9 0.00000141973073914462 1 0.00758981144203659 "response to stress" "TAIR-GO" 9 0.00000141973073914462 1 0.00758981144203659 "sugar mediated signaling" "TAIR-GO" 9 0.0000269144828564048 1 0.0180881040753458 "lysine biosynthesis I" "AraCyc" 9 0.00466358450838531 1 0.152634961304818 "Aminosugars metabolism" "KEGG" 9 0.00236105977068617 1 0.208743198931031 "Biodegradation of Xenobiotics" "KEGG" 9 0.00000000000501384581218 1 0.00163719158613148 "Urea cycle and metabolism of amino groups" "KEGG" 9 0.0403985607557289 1 0.25436575528221 "non-phosphorylated glucose degradation" "AraCyc" 8 0.0462565127583582 2 0.142093703705242 "starch degradation" "AraCyc" 8 0.0172371244738369 1 0.12417028107703 "ureide biosynthesis" "AraCyc" 8 0.00000869809861508468 2 0.00475953501331462 "energy" "FunCat" 8 0.000000000568827476572285 1 0.00192074367236276 "metabolism of energy reserves (e.g. glycogen, trehalose)" "FunCat" 8 0.000000000000144267584674817 1 0 "transport facilitation" "FunCat" 8 0 2 0.0000163093845465159 "Limonene and pinene degradation" "KEGG" 8 0.000000340002354868037 3 0.0000367867304835777 "Lysine degradation" "KEGG" 8 0.0120854594523177 3 0.0107829059431539 "embryonic development (sensu Magnoliophyta)" "TAIR-GO" 7 0.0319830934150188 1 0.0908662352833046 "polyamine biosynthesis" "TAIR-GO" 7 0.00000261425384685094 1 0.00388716311529661 "proteasome regulatory particle, base subcomplex (sensu Eukaryota)" "TAIR-GO" 7 0.00423614024456203 1 0.0493522024777135 "putrescine biosynthesis" "TAIR-GO" 7 0.0000000421953307098802 1 0.00132730748199489 "response to abscisic acid stimulus" "TAIR-GO" 7 0.0111819468383577 1 0.0690575820277148 "response to jasmonic acid stimulus" "TAIR-GO" 7 0.00107463244267483 1 0.0247272216501852 "response to osmotic stress" "TAIR-GO" 7 0.00000365063489558657 1 0.00758981144203659 "seed development" "TAIR-GO" 7 0.00000000467199109145364 1 0.00132730748199489 "arginine degradation XII" "AraCyc" 7 0.000000113071184892312 1 0.00489495301060985 "isoleucine degradation III" "AraCyc" 7 0.0143238980806936 1 0.0844815188179763 "leucine degradation II" "AraCyc" 7 0.0143238980806936 1 0.0844815188179763 "polyamine biosynthesis III" "AraCyc" 7 0.016860280336164 1 0.072298268549926 "valine degradation II" "AraCyc" 7 0.0120770616904372 1 0.152634961304818 "biosynthesis of amines" "FunCat" 7 0.00000000537577905070476 1 0.000651120813818597 "biosynthesis of secondary products derived from primary amino acids" "FunCat" 7 0.0000301897408981845 1 0.0363667716877988 "HORMONE DATA SET" "quantDE" 0 "maxDE" 3.7639469 "HORMONE DATA SET" "Phenylpropanoid Metabolism" "BioPath" 45 0.000000000073785079194887 7 0.0024215882800365 "Phenylpropanoid pathway" "LitPath" 28 0.00000000000280533576905717 5 0.000296931852203993 "core phenylpropanoid metabolism" "BioPath" 26 0.00000000000020717785305798 4 0.000370791850022403 "Gluconeogenesis from lipids in seeds" "BioPath" 26 0.000000000224144255256403 4 0.00248815347245376 "biogenesis of cell wall" "FunCat" 24 3.17397985456996E-016 3 0.00423634330063447 "Miscellaneous acyl lipid metabolism" "AcylLipid" 22 0.00000340368756744327 5 0.00595041548849848 "Fatty acid metabolism" "KEGG" 20 0.0000000000000169665410022768 2 0.00416828013523437 "Glutathione metabolism" "KEGG" 20 0.0000000000000132257963109191 4 0.000044177906712286 "degradation of abscisic acid" "LitPath" 20 4.70296570641347E-028 2 0.00000916892322716494 "ascorbate glutathione cycle" "AraCyc" 18 1.78002149658161E-015 2 0.00172877142649776 "Arginine and proline metabolism" "KEGG" 18 0.00000000000029703888184707 3 0.000662510431285225 "Glutamate metabolism" "KEGG" 17 0.000000000232738992501887 3 0.000725369235759453 "polyamine biosynthesis" "TAIR-GO" 16 2.27328235770665E-023 2 0.0000067017916975559 "polyamine biosynthesis I" "AraCyc" 16 0.00000000337163741215756 2 0.00799739572891667 "polyamine biosynthesis II" "AraCyc" 16 0.00000000000620976577299974 2 0.00207611200468681 "polyamine biosynthesis III" "AraCyc" 16 1.7271525886823E-015 2 0.000538410972967638 "spermine biosynthesis I" "AraCyc" 16 0.000000000000083691669290706 2 0.000538410972967638 "Glutathione metabolism" "BioPath" 14 0.00371385072728488 2 0.074434092781174 "lignin biosynthesis" "AraCyc" 14 0.000023623068879139 3 0.00449657131571778 "transcription" "FunCat" 14 1.52028525011844E-017 2 0.000364031747618493 "Phenylalanine, tyrosine and tryptophan biosynthesis" "KEGG" 14 0.000000055162516508197 3 0.000725369235759453 "fatty acid beta oxidation complex" "BioPath" 12 0.000000084684106919485 2 0.003464855560959 "alanine biosynthesis II" "AraCyc" 12 0.0000000609193151336166 2 0.0064285221899924 "phenylalanine biosynthesis II" "AraCyc" 12 0.00000000637203481505121 2 0.00444904568284988 "Aromatic amino acid (Phe, Tyr, Trp) metabolism" "BioPath" 10 0.0190365470011887 1 0.185498826017421 "Regulatory enzymes" "BioPath" 10 0.000000000000774671963189462 1 0.000594527812050067 "sucrose metabolism" "BioPath" 10 0.0000071928296209248 1 0.0293293493698711 "aromatic amino acid family biosynthesis" "TAIR-GO" 10 0.0000224602664742704 1 0.028684955499009 "aromatic amino acid family biosynthesis, shikimate pathway" "TAIR-GO" 10 0.00000319627411745114 1 0.0213165658661275 "carotenoid biosynthesis" "TAIR-GO" 10 0.000000178517268871045 1 0.0094957922883949 "cell death" "TAIR-GO" 10 0.000000000457593825315344 1 0.00213711361079263 "fatty acid alpha-oxidation" "TAIR-GO" 10 0 1 0 "fatty acid metabolism" "TAIR-GO" 10 0.00198811280453684 1 0.0828198634773807 "hypersensitive response" "TAIR-GO" 10 0.00000000952311830538386 1 0.00521318632575415 "lignin biosynthesis" "TAIR-GO" 10 0.00000202696534138237 1 0.0120605173531024 "long-chain fatty acid metabolism" "TAIR-GO" 10 0.0000205987612616415 1 0.0413390936485563 "plastid organization and biogenesis" "TAIR-GO" 10 0.0000000000019947862897966 1 0.00213711361079263 "response to bacteria" "TAIR-GO" 10 0 1 0 "response to cold" "TAIR-GO" 10 0.0000000145302036216999 1 0.00720955840938745 "response to flooding" "TAIR-GO" 10 0 1 0 "response to high light intensity" "TAIR-GO" 10 0.0000000000019947862897966 1 0.00108178087651381 "response to temperature" "TAIR-GO" 10 0.00000000000843791409598169 1 0.00108178087651381 "fatty acid oxidation pathway" "AraCyc" 10 0.0000202286349302969 1 0.0342384013492132 "jasmonic acid biosynthesis" "AraCyc" 10 0.0000071880491505024 1 0.0309389628022172 "lipoxygenase pathway" "AraCyc" 10 0.000000100740507840021 1 0.0141658913899427 "mixed acid fermentation" "AraCyc" 10 0.000112275746020778 1 0.10185259560071 "octane oxidation" "AraCyc" 10 0.000000741003965204749 1 0.00985326730028063 "sorbitol fermentation" "AraCyc" 10 0.00901858938432822 1 0.273446105177124 "sucrose biosynthesis" "AraCyc" 10 0.00000261374715650549 1 0.0376685591385371 "sucrose degradation III" "AraCyc" 10 0.000000130648144788633 1 0.0247516627507954 "tyrosine biosynthesis I" "AraCyc" 10 0.00000000056383720475114 1 0.0079618029744235 "C-compound, carbohydrate anabolism" "FunCat" 10 0.00000000218669756938316 1 0.0166219164160259 "Starch and sucrose metabolism" "KEGG" 10 0.00242291365357416 1 0.165590014493023 "Stilbene, coumarine and lignin biosynthesis" "KEGG" 10 0.000478093309897202 1 0.251571815196658 "Degradation of storage lipids and straight fatty acids" "AcylLipid" 10 0.000498231442602154 1 0.118194224893694 "Accessory protein/regulatory protein" "LitPath" 10 0 1 0 "chorismate biosynthesis" "LitPath" 10 0.00000040551190944738 1 0.0161787003604264 "Shikimate pathway" "LitPath" 10 0.00552180098471987 1 0.112867932784832 "Flavonoid and anthocyanin metabolism" "BioPath" 9 0.00174668273966823 2 0.042694633588391 "defense response" "TAIR-GO" 9 0.0023823428041454 1 0.0556987867357807 "defense response to fungi" "TAIR-GO" 9 0 1 0 "ethylene mediated signaling pathway" "TAIR-GO" 9 4.50091108565735E-015 1 0.000365061486636309 "jasmonic acid and ethylene-dependent systemic resistance" "TAIR-GO" 9 0.000000000000626519631207917 1 0.000365061486636309 "jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway" "TAIR-GO" 9 0 1 0 "spermine biosynthesis II" "AraCyc" 9 0.000000000285374613419383 1 0.00139520581523329 "Aminosugars metabolism" "KEGG" 9 0.00000000504816827385733 1 0.0173366988447767 "beta-Alanine metabolism" "KEGG" 9 0.000000178390711900116 1 0.0157818822949808 "Urea cycle and metabolism of amino groups" "KEGG" 9 0.00000030814302189493 1 0.0223713320536245 "additional photosystem II components" "BioPath" 8 0.0395091605334146 1 0.106416298054703 "ascorbic acid biosynthesis" "BioPath" 8 0.000260973519623884 1 0.0353791017078762 "Early light-inducible proteins" "BioPath" 8 0.000000104117920156318 1 0.00401328407715877 "flavonoid biosynthesis" "TAIR-GO" 8 0.00000294856379317185 1 0.00720955840938745 "toxin catabolism" "TAIR-GO" 8 0.00241375622133758 4 0.00144106611874801 "mRNA synthesis " "FunCat" 8 0.00000596057937112315 1 0.0323704916043791 "RNA synthesis " "FunCat" 8 0.00000596057937112315 1 0.0323704916043791 "transcriptional control" "FunCat" 8 0.0000000811123238392831 1 0.00671911160363774 "Ascorbate and aldarate metabolism" "KEGG" 8 0.0000312074131565807 1 0.0241686589798504 "embryonic development" "TAIR-GO" 7 0.0106856567879446 1 0.0507369938600957 "embryonic development (sensu Magnoliophyta)" "TAIR-GO" 7 0.00108487308387278 1 0.028684955499009 "putrescine biosynthesis" "TAIR-GO" 7 0.000000000430349008827923 1 0.000365061486636309 "response to abscisic acid stimulus" "TAIR-GO" 7 0.000297069343429604 1 0.0213165658661275 "response to jasmonic acid stimulus" "TAIR-GO" 7 0.0000197672034728029 1 0.00720955840938745 "response to osmotic stress" "TAIR-GO" 7 0.0000000433826896472549 1 0.00213711361079263 "response to wounding" "TAIR-GO" 7 0.0350059771456568 1 0.0661076549868259 "seed development" "TAIR-GO" 7 0.0000000000455044762909804 1 0.000365061486636309 "arginine degradation II" "AraCyc" 7 0.000845638801008406 1 0.0342384013492132 "arginine degradation III" "AraCyc" 7 0.00000491260227725866 1 0.0079618029744235 "arginine degradation V" "AraCyc" 7 0.0000082565760440101 1 0.0141658913899427 "arginine degradation XII" "AraCyc" 7 0.000000000035494389571243 1 0.000704657759001189 "colanic acid building blocks biosynthesis" "AraCyc" 7 0.0479010571203341 3 0.0105941791429422 "dTDP-rhamnose biosynthesis" "AraCyc" 7 0.00904088833383199 3 0.00413530321980314 "galactose degradation I" "AraCyc" 7 0.0000000141544500555559 3 0.00000178241464301541 "glucose conversion" "AraCyc" 7 0.00552054195954208 3 0.00317045809996917 "lactose degradation IV" "AraCyc" 7 0.0000000141544500555559 3 0.00000178241464301541 "UDP-glucose conversion" "AraCyc" 7 0.00474016872245722 3 0.00288662361075874 "biosynthesis of amines" "FunCat" 7 0.00000000000197498758809672 1 0.000108794870157032 "biosynthesis of secondary products derived from primary amino acids" "FunCat" 7 0.0000000173391165981347 1 0.00671911160363774 "MUTANT DATA SET" "quantDE" 1.369581 "maxDE" 6.38920501 "HORMONE DATA SET" "Cell Wall Carbohydrate Metabolism" "BioPath" 8 0.000223911604546742 2 0.0295679135883546 "C-compound and carbohydrate metabolism" "FunCat" 7 0.0048182193333404 2 0.0340493646442109