"Pathway" "Pathway.source" "Annotation.score" "p.value.score" "No.of.genes" "p.value.genes" "IN THREE DATA SETS" "" "sum.of.scores" "sum.of.genes" "" "" "ORGAN DATA SET" "quantDE" "4.555478" "maxDE" "6.0245288" "ORGAN DATA SET" "secondary metabolism" "FunCat" "13" "3.8577815912213e-17" "3" "8.21625713121393e-06" "Cell Wall Carbohydrate Metabolism" "BioPath" "12" "3.20195066265123e-06" "2" "0.0162901845172494" "cellulose biosynthesis" "BioPath" "12" "8.87785370279926e-16" "2" "4.46186688089476e-05" "hemicellulose biosynthesis" "BioPath" "8" "8.90112510346682e-13" "1" "0.000337778386364021" "cellulose biosynthesis" "AraCyc" "8" "5.5485499219208e-11" "2" "4.23870764761077e-05" "auxin biosynthesis" "TAIR-GO" "7" "4.89255218284862e-16" "1" "1.86690547562757e-05" "auxin metabolism" "TAIR-GO" "7" "1.15616961901896e-15" "1" "3.10939227358021e-05" "regulation of transcription" "TAIR-GO" "7" "7.72718539714928e-22" "1" "0" "regulation of transcription, DNA-dependent" "TAIR-GO" "7" "0" "1" "0" "IAA biosynthesis" "AraCyc" "7" "2.32510704469465e-12" "1" "0.000172453981112158" "IAA biosynthesis I" "AraCyc" "7" "1.35181807173107e-13" "1" "9.43020545136586e-05" "STRESS DATA SET" "quantDE" "0.5829959" "maxDE" "2.920964" "STRESS DATA SET" "HORMONE DATA SET" "quantDE" "1.114684" "maxDE" "1.4128058" "HORMONE DATA SET" "Biosynthesis of steroids" "KEGG" "15" "9.01060920744275e-12" "3" "0.000128265754546563" "glycolysis and gluconeogenesis" "FunCat" "14" "2.56856400043443e-09" "2" "0.00682747975576321" "Phenylpropanoid Metabolism" "BioPath" "12" "4.77553444802114e-05" "2" "0.0473453584842353" "TCA cycle variation VII" "AraCyc" "11" "6.59132910849191e-09" "2" "0.00710760415599772" "TCA cycle variation VIII" "AraCyc" "11" "1.09244503168924e-10" "2" "0.0025884134472341" "triterpene, sterol, and brassinosteroid metabolism" "LitPath" "11" "8.97255525529407e-05" "2" "0.0500306267393309" "Glucosyltransferases for benzoic acids" "BioPath" "10" "1.4250972394505e-12" "1" "0.00167881153412282" "Intermediary Carbon Metabolism" "BioPath" "10" "0.000187597926789779" "1" "0.177376939327864" "lipoic acid metabolism" "TAIR-GO" "10" "0" "1" "0" "glyoxylate cycle" "AraCyc" "10" "5.65648764850448e-12" "1" "0.00746130233381362" "C-compound and carbohydrate utilization " "FunCat" "10" "2.22708021538457e-25" "1" "1.13327989746908e-05" "glyoxylate cycle" "FunCat" "10" "1.01091038809969e-22" "1" "3.39328894155481e-05" "Glyoxylate and dicarboxylate metabolism" "KEGG" "10" "2.68467416229502e-10" "1" "0.011497901641768" "Pyruvate metabolism" "KEGG" "10" "3.60820068313157e-06" "1" "0.0664832145403798" "metabolism of acyl-lipids in mitochondria" "AcylLipid" "10" "3.10127170062064e-09" "1" "0.0293156131018579" "Biosynthesis of prenyl diphosphates" "BioPath" "8" "2.72176705136379e-06" "2" "0.00108570383613973" "Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone)" "BioPath" "8" "0.000624489218562275" "2" "0.00673892882151663" "Terpenoid biosynthesis" "KEGG" "8" "2.67444936533534e-08" "2" "0.000257933560580345" "Transcription" "KEGG" "8" "1.41972224399297e-05" "2" "0.00991254412229107" "prenyl diphosphate (GPP,FPP, GGPP) biosynthesis" "LitPath" "8" "6.31549179941657e-07" "2" "0.000678898099363763" "pentacyclic triterpenoid biosynthesis" "TAIR-GO" "7" "1.41950505772927e-13" "1" "8.68853042407226e-05" "isoprenoid biosynthesis " "FunCat" "7" "3.55265560920724e-05" "1" "0.0185087792704823" "lipid, fatty acid and isoprenoid biosynthesis " "FunCat" "7" "1.36318126707724e-05" "1" "0.0141538298758883" "triterpene biosynthesis" "LitPath" "7" "9.71634793306534e-08" "1" "0.0066587667424177" "MUTANT DATA SET" "quantDE" "0.8713328" "maxDE" "4.117056882" "MUTANT DATA SET" "Miscellaneous acyl lipid metabolism" "AcylLipid" "8" "0.000225148776746682" "4" "0.00629166999545085"