"Pathway" "Pathway.source" "V3" "V4" "V5" "V6" "IN TWO DATA SETS" "" "sum.of.scores" "sum.of.genes" "" "" "glycolysis and gluconeogenesis" "FunCat" "30" "5" "" "" "Intermediary Carbon Metabolism" "BioPath" "26" "3" "" "" "glyoxylate cycle" "AraCyc" "26" "3" "" "" "Glyoxylate and dicarboxylate metabolism" "KEGG" "26" "3" "" "" "glyoxylate cycle" "AraCyc" "26" "3" "" "" "Carbon fixation" "KEGG" "20" "3" "" "" "secondary metabolism" "FunCat" "17" "2" "" "" "secondary metabolism" "FunCat" "17" "2" "" "" "ORGAN DATA SET" "quantDE" "5.793545" "maxDE" "7.950249" "ORGAN DATA SET" "Synthesis and storage of oil" "AcylLipid" "38" "2.98857912851132e-46" "10" "3.48565299389475e-13" "Miscellaneous acyl lipid metabolism" "AcylLipid" "25" "0.0152116148861639" "5" "0.616945733594857" "gibberellic acid biosynthesis" "TAIR-GO" "20" "4.50381510923478e-23" "2" "0.000120927623792485" "plant / fungal specific systemic sensing and response " "FunCat" "20" "6.4811168630001e-18" "2" "0.00189947699562606" "plant hormonal regulation" "FunCat" "20" "6.4811168630001e-18" "2" "0.00189947699562606" "Diterpenoid biosynthesis" "KEGG" "20" "1.19496486526181e-22" "2" "0.000177726979254434" "Pyruvate metabolism" "KEGG" "20" "1.06971211442477e-11" "3" "0.00493855948338856" "Gibberellin metabolism" "LitPath" "20" "1.10551912432835e-15" "2" "0.00250138037590425" "giberelin biosynthesis" "LitPath" "20" "4.84068461766135e-19" "2" "0.00109539250984347" "acyl-CoA binding" "TAIR-GO" "19" "0" "2" "0" "lipid transport" "TAIR-GO" "19" "1.15029578597030e-28" "2" "2.62892237046237e-05" "Intermediary Carbon Metabolism" "BioPath" "16" "1.41045527448095e-06" "2" "0.0983029756957132" "glyoxylate cycle" "AraCyc" "16" "3.91510597619235e-10" "2" "0.0125146916905246" "TCA cycle variation VII" "AraCyc" "16" "0.000117013216411502" "2" "0.190540970729924" "TCA cycle variation VIII" "AraCyc" "16" "1.08978743137215e-06" "2" "0.0875934377653587" "glycolysis and gluconeogenesis" "FunCat" "16" "0.00239840672639476" "3" "0.0706610066973627" "Glyoxylate and dicarboxylate metabolism" "KEGG" "16" "1.08087452414463e-14" "2" "0.00237588363595488" "Gluconeogenesis from lipids in seeds" "BioPath" "13" "1.67183069324653e-08" "2" "0.0116442622579008" "Biosynthesis of Amino Acids and Derivatives" "BioPath" "12" "0.00312735399721514" "2" "0.111698428540457" "Branched-chain amino acids from aspartate" "BioPath" "10" "6.92774455809085e-10" "1" "0.0132274658251085" "gibberellic acid mediated signaling" "TAIR-GO" "10" "8.02548496014972e-13" "1" "0.000872685460777355" "microsome" "TAIR-GO" "10" "0" "1" "0" "oxygen binding" "TAIR-GO" "10" "4.56555639807115e-18" "1" "8.87987399926157e-05" "gibberellin biosynthesis" "AraCyc" "10" "2.29036315205206e-07" "1" "0.0263056585602077" "mixed acid fermentation" "AraCyc" "10" "0.000132102190598335" "2" "0.0384672930089826" "threonine biosynthesis from homoserine" "AraCyc" "10" "9.6402464926731e-12" "1" "0.00439588299189504" "biosynthesis of derivatives of homoisopentenyl pyrophosphate " "FunCat" "10" "1.36885024460470e-07" "1" "0.0166670877017427" "glyoxylate cycle" "FunCat" "10" "2.45453316373501e-16" "1" "0.000527671715497095" "lipid, fatty acid and isoprenoid metabolism" "FunCat" "10" "0.000450572393738122" "2" "0.0170152259436957" "secondary metabolism" "FunCat" "10" "0.000515552233569089" "1" "0.193135258301152" "Carbon fixation" "KEGG" "10" "0.000131607189833700" "2" "0.024730830001679" "Glycine, serine and threonine metabolism" "KEGG" "10" "5.46569696435321e-07" "1" "0.0474697252579976" "Vitamin B6 metabolism" "KEGG" "10" "4.02952781173187e-15" "1" "0.00188941717770448" "degradation of abscisic acid" "LitPath" "10" "2.12099634340285e-11" "1" "0.00168667189796663" "isoleucine degradation I" "AraCyc" "9" "0.000125104937122709" "2" "0.0140833890563564" "isoleucine degradation III" "AraCyc" "9" "2.39993492925285e-07" "2" "0.00184417157872166" "leucine degradation I" "AraCyc" "9" "0.000125104937122709" "2" "0.0140833890563564" "leucine degradation II" "AraCyc" "9" "2.39993492925285e-07" "2" "0.00184417157872166" "valine degradation I" "AraCyc" "9" "9.75659309216516e-05" "2" "0.0357112156218609" "valine degradation II" "AraCyc" "9" "1.79531717385267e-07" "2" "0.0052732183134468" "formaldehyde assimilation I (serine pathway)" "AraCyc" "8" "0.00155730192211061" "2" "0.0330617139219604" "gluconeogenesis" "AraCyc" "8" "0.0167472994203801" "2" "0.07165379549427" "serine-isocitrate lyase pathway" "AraCyc" "8" "0.0194982604491922" "2" "0.07165379549427" "fatty acid beta oxidation complex" "BioPath" "7" "2.58630006958881e-07" "1" "0.0103162130774312" "fatty acid beta-oxidation" "TAIR-GO" "7" "5.06921819135581e-08" "1" "0.00130147071471247" "secondary metabolism" "TAIR-GO" "7" "0" "1" "0" "fatty acid oxidation pathway" "AraCyc" "7" "0.00248514403009501" "1" "0.0618671411171365" "degradation " "FunCat" "7" "0.000151140051907171" "1" "0.0470014045693179" "protein degradation " "FunCat" "7" "1.24274013706327e-05" "1" "0.0262369454420762" "STRESS DATA SET" "quantDE" "0" "maxDE" "3.045639" "STRESS DATA SET" "HORMONE DATA SET" "quantDE" "5.176798" "maxDE" "7.3331424" "HORMONE DATA SET" "triterpene, sterol, and brassinosteroid metabolism" "LitPath" "15" "4.17278978913762e-06" "3" "0.0233522482435352" "C-compound and carbohydrate metabolism" "FunCat" "14" "4.99620858702378e-05" "2" "0.0902977966442804" "glycolysis and gluconeogenesis" "FunCat" "14" "4.32488795182009e-09" "2" "0.0112021903700874" "Phenylpropanoid Metabolism" "BioPath" "12" "2.11827330113594e-05" "2" "0.0473453584842353" "Glucosyltransferases for benzoic acids" "BioPath" "10" "6.16183960886888e-13" "1" "0.00167881153412282" "Intermediary Carbon Metabolism" "BioPath" "10" "9.55633869110103e-05" "1" "0.177376939327864" "Calvin cycle" "AraCyc" "10" "3.39290502089945e-13" "1" "0.0122590283319921" "C-compound and carbohydrate utilization " "FunCat" "10" "3.3769266718637e-25" "1" "1.60719694550160e-05" "photosynthesis" "FunCat" "10" "3.98848594660307e-09" "1" "0.0137723038144630" "Carbon fixation" "KEGG" "10" "2.61529274100412e-07" "1" "0.0643858706344598" "Glyoxylate and dicarboxylate metabolism" "KEGG" "10" "6.43223615190073e-11" "1" "0.0135136548344783" "brassinosteroid metabolism" "TAIR-GO" "9" "1.26558307760462e-22" "1" "2.85609982432389e-05" "response to light" "TAIR-GO" "9" "9.98488581173233e-09" "1" "0.0170873734436546" "brassinosteroid degradation" "LitPath" "9" "9.937339384741e-19" "1" "0.000286730877005487" "triacylglycerol degradation" "AraCyc" "8" "1.44559607472013e-11" "4" "2.55622519543593e-06" "auxin mediated signaling pathway" "TAIR-GO" "7" "1.24614813566531e-13" "1" "8.54208336035678e-05" "growth" "TAIR-GO" "7" "1.30495796548086e-06" "1" "0.00736895572964275" "response to auxin stimulus" "TAIR-GO" "7" "2.98362043633468e-10" "1" "0.00100637567966791" "unidimensional cell growth" "TAIR-GO" "7" "2.60164756153983e-08" "1" "0.00215391761291406" "MUTANT DATA SET" "quantDE" "3.979285" "maxDE" "5.454398521" "MUTANT DATA SET"