"Pathway" "Pathway.source" "Annotation.score" "p.value.score" "No.of.genes" "p.value.genes" "IN THREE DATA SETS" "" "sum.of.scores" "sum.of.genes" "" "" "ORGAN DATA SET" "quantDE" "2.214" "maxDE" "5.4077538" "ORGAN DATA SET" "mono-/sesqui-/di-terpene biosynthesis" "LitPath" "18" "1.04382525223776e-15" "3" "0.000113790235681072" "terpenoid metabolism" "LitPath" "18" "1.16172911334592e-15" "3" "0.000129569688132226" "sequiterpene biosynthesis" "LitPath" "10" "4.94383813104375e-18" "1" "9.12325517744731e-05" "STRESS DATA SET" "quantDE" "1.542447" "maxDE" "5.366439" "STRESS DATA SET" "HORMONE DATA SET" "quantDE" "0.271596" "maxDE" "2.430389" "HORMONE DATA SET" "Biosynthesis of prenyl diphosphates" "BioPath" "10" "3.58645500009556e-14" "1" "0.000269114987201392" "Isoprenoid Biosynthesis in the Cytosol and in Mitochondria" "BioPath" "10" "1.92791178292096e-12" "1" "0.000555583054972853" "dolichol biosynthesis" "TAIR-GO" "10" "2.40535361964348e-29" "1" "1.55787263144940e-06" "polyprenyl diphosphate biosynthesis" "LitPath" "10" "0" "1" "0" "cytokinin catabolism" "TAIR-GO" "9" "1.52929766594012e-23" "1" "5.19290877149799e-06" "cytokinins degradation" "AraCyc" "9" "3.8586735945404e-31" "1" "3.76410220892574e-07" "MUTANT DATA SET" "quantDE" "0.1517842" "maxDE" "5.67540217" "MUTANT DATA SET" "Cell Wall Carbohydrate Metabolism" "BioPath" "71" "1.05568130852782e-13" "25" "1.4001575542291e-05" "C-compound and carbohydrate metabolism" "FunCat" "48" "0.000578362557342145" "11" "0.0943553378308826" "pectin metabolism" "BioPath" "44" "8.91421120896135e-21" "20" "5.45238531422271e-09" "Phenylpropanoid Metabolism" "BioPath" "32" "0.00117794834585174" "7" "0.207988589698426" "Intermediary Carbon Metabolism" "BioPath" "28" "0.00118162859538194" "6" "0.263050637871552" "Ribosome" "KEGG" "28" "0.00658670775205675" "5" "0.278910729596278" "triterpene, sterol, and brassinosteroid metabolism" "LitPath" "21" "0.0202344137676707" "6" "0.0409955077941344" "Nucleotide Metabolism" "KEGG" "18" "2.93784428873157e-07" "4" "0.0099388122087483" "Pyrimidine metabolism" "KEGG" "18" "2.73174303148925e-12" "4" "0.000574326881266152" "Lipid signaling" "AcylLipid" "18" "9.56157747663155e-05" "4" "0.154412809406885" "mono-/sesqui-/di-terpene biosynthesis" "LitPath" "18" "1.1628965303837e-05" "3" "0.062933215309188" "terpenoid metabolism" "LitPath" "18" "1.26239804604547e-05" "3" "0.0694065693266356" "transcription" "FunCat" "17" "3.78866198368173e-16" "4" "3.62583334556462e-05" "glycolysis IV" "AraCyc" "16" "0.000210979928056221" "5" "0.0074709758011632" "nucleotide metabolism" "FunCat" "16" "0" "4" "0" "RNA synthesis " "FunCat" "15" "3.02476266227411e-08" "3" "0.00800453318575865" "jasmonic acid biosynthesis" "TAIR-GO" "14" "9.77231151612682e-13" "2" "0.000676130634995748" "(deoxy)ribose phosphate degradation" "AraCyc" "14" "2.67100030450892e-12" "3" "0.000149604644604833" "acetate fermentation" "AraCyc" "14" "0.00283547688963575" "4" "0.0369439707046418" "fructose degradation (anaerobic)" "AraCyc" "14" "0.00161306040533324" "4" "0.0277051636350414" "glycerol degradation II" "AraCyc" "14" "8.2469509323209e-05" "4" "0.00708157348504396" "jasmonic acid biosynthesis" "AraCyc" "14" "1.84267938229984e-07" "2" "0.0119769112600808" "non-phosphorylated glucose degradation" "AraCyc" "14" "1.21617333634836e-08" "4" "0.00154602345613594" "sorbitol fermentation" "AraCyc" "14" "0.00303144827392755" "4" "0.0330477801232335" "pyrimidine nucleotide metabolism" "FunCat" "14" "2.84681120545038e-10" "3" "0.00136742078792119" "cell growth / morphogenesis " "FunCat" "13" "5.91853227816783e-16" "2" "0.00025455499411599" "Flavonoid and anthocyanin metabolism" "BioPath" "12" "0.000134664974303860" "3" "0.107423629653412" "abscisic acid biosynthesis" "AraCyc" "12" "4.77159963414933e-14" "2" "0.000190191654816430" "lipases pathway" "AraCyc" "12" "2.34366142468841e-05" "2" "0.0326061480006389" "mixed acid fermentation" "AraCyc" "12" "0.000140021028718143" "3" "0.0143438941134921" "biogenesis of cell wall" "FunCat" "12" "0.0184220663235882" "5" "0.0117587077505357" "Carbon fixation" "KEGG" "12" "0.000884840156750185" "3" "0.0259526171197927" "Glycolysis / Gluconeogenesis" "KEGG" "12" "0.00289850719617927" "3" "0.0444433748292030" "Purine metabolism" "KEGG" "12" "0.000239477621366190" "3" "0.0199415303794528" "Pyruvate metabolism" "KEGG" "12" "0.00289850719617927" "3" "0.0360308916918976" "abscisic acid biosynthesis" "LitPath" "12" "9.65675096796856e-09" "2" "0.00541794307096234" "Carotenoid and abscisic acid metabolism" "LitPath" "12" "0.00289359182570073" "2" "0.0822139033584262" "starch biosynthesis" "AraCyc" "11" "0" "2" "0" "Starch and sucrose metabolism" "KEGG" "11" "0.0100963636185120" "2" "0.142173864692153" "Glucosyltransferases for benzoic acids" "BioPath" "10" "4.21589853357351e-05" "1" "0.0669820453658297" "trehalose metabolism" "BioPath" "10" "1.32471367153127e-09" "2" "0.007934241287085" "anther dehiscence" "TAIR-GO" "10" "0" "1" "0" "glucosinolate biosynthesis" "TAIR-GO" "10" "1.06400320737136e-10" "1" "0.00240145600291688" "oxygen binding" "TAIR-GO" "10" "2.66619666517488e-18" "1" "8.87987399926157e-05" "pollen maturation" "TAIR-GO" "10" "0" "1" "0" "glucosinolate biosynthesis from phenylalanine" "AraCyc" "10" "1.36001492238191e-09" "1" "0.00427428015115586" "trehalose biosynthesis II" "AraCyc" "10" "0.0232081459905851" "2" "0.181880750710343" "trehalose biosynthesis III" "AraCyc" "10" "0.000546632248375838" "2" "0.0553412123284452" "energy" "FunCat" "10" "4.1892403743867e-14" "2" "2.66087529473366e-05" "metabolism of energy reserves (e.g. glycogen, trehalose)" "FunCat" "10" "0" "2" "0" "Ligand-Receptor Interaction" "KEGG" "10" "3.26136584990388e-06" "5" "0.000220527230176656" "Transcription" "KEGG" "10" "0.00232175777191467" "3" "0.0444433748292030" "sequiterpene biosynthesis" "LitPath" "10" "9.96712976078897e-12" "1" "0.00243721245454664" "starch metabolism" "BioPath" "9" "0.00267029896835605" "1" "0.262428879607118" "brassinosteroid biosynthesis" "TAIR-GO" "9" "3.24244910164473e-08" "1" "0.00553118567447626" "steroid biosynthesis" "TAIR-GO" "9" "3.24244910164473e-08" "1" "0.00553118567447626" "brassinosteroid biosynthesis I" "AraCyc" "9" "0.000158233174704762" "1" "0.102027240578137" "dTDP-rhamnose biosynthesis" "AraCyc" "9" "0.00769996921952072" "1" "0.329033749810022" "peptidoglycan biosynthesis" "AraCyc" "9" "5.12350233899398e-09" "1" "0.0185682969236916" "UDP-N-acetylglucosamine biosynthesis" "AraCyc" "9" "1.12236829103796e-07" "1" "0.0141769433920668" "intracellular signalling" "FunCat" "9" "0.0271049127147955" "2" "0.229752657369848" "proanthocyanidin biosynthesis" "TAIR-GO" "8" "6.96021344106324e-13" "1" "0.000264856619182462" "trans-zeatin biosynthesis" "AraCyc" "8" "4.58305349050144e-07" "2" "0.00100288279719219" "C-compound, carbohydrate anabolism" "FunCat" "8" "0.000239802193930746" "2" "0.0181470578598202" "general transcription activities" "FunCat" "8" "6.43134502037394e-06" "2" "0.0076015439054694" "mRNA synthesis " "FunCat" "8" "0.00250496405928142" "2" "0.0460894580856139" "Ion channels" "KEGG" "8" "9.9556613517546e-05" "4" "0.00147411108442718" "RNA polymerase" "KEGG" "8" "0.000670903135578344" "2" "0.0317838558630163" "calcium-mediated signaling" "TAIR-GO" "7" "1.23731637568198e-12" "1" "0.000264856619182462" "cytokinin biosynthesis" "TAIR-GO" "7" "2.02598498276116e-10" "1" "0.000526652889028794" "cytoskeleton" "FunCat" "7" "0" "1" "0" "directional cell growth (morphogenesis)" "FunCat" "7" "1.76878437663995e-11" "1" "0.00264872782056205" "RNA modification " "FunCat" "7" "3.01909286693309e-10" "1" "0.000900648442152242" "tRNA modification " "FunCat" "7" "0" "1" "0" "tRNA synthesis " "FunCat" "7" "1.19132525423653e-06" "1" "0.0171308099431579" "Phosphatidylinositol signaling system" "KEGG" "7" "0.00224971031613172" "1" "0.11808581550163" "Signal Transduction" "KEGG" "7" "0.00286603415672062" "1" "0.123885437075083"