"Pathway" "Pathway.source" "V3" "V4" "V5" "V6" "IN TWO DATA SETS" "" "sum.of.scores" "sum.of.genes" "" "" "jasmonic acid biosynthesis" "AraCyc" "30" "3" "" "" "amino acid metabolism" "FunCat" "29" "5" "" "" "Lipid signaling" "AcylLipid" "26" "3" "" "" "Arginine and proline metabolism" "KEGG" "21" "3" "" "" "Urea cycle and metabolism of amino groups" "KEGG" "21" "3" "" "" "ORGAN DATA SET" "quantDE" "3.406106" "maxDE" "5.6925461" "ORGAN DATA SET" "STRESS DATA SET" "quantDE" "3.433047" "maxDE" "11.10501" "STRESS DATA SET" "Cell Wall Carbohydrate Metabolism" "BioPath" "16" "1.04840417904716e-07" "3" "0.0279002811727878" "Lipid signaling" "AcylLipid" "16" "7.16447110523624e-09" "2" "0.0499101663881048" "C-compound and carbohydrate utilization " "FunCat" "12" "4.30030463237496e-33" "2" "0" "cell death" "TAIR-GO" "10" "1.55952019820480e-17" "1" "8.68853042407226e-05" "fatty acid alpha-oxidation" "TAIR-GO" "10" "0" "1" "0" "jasmonic acid biosynthesis" "AraCyc" "10" "4.48257512605411e-08" "1" "0.0116447710731596" "lipoxygenase pathway" "AraCyc" "10" "4.8369791903704e-10" "1" "0.00520183075916384" "auxin metabolism" "TAIR-GO" "9" "1.64839254761629e-16" "1" "0.000144513388046403" "cytidine deamination" "TAIR-GO" "9" "0" "1" "0" "hyperosmotic salinity response" "TAIR-GO" "9" "2.84797636528785e-13" "1" "0.000643700662803448" "proline biosynthesis" "TAIR-GO" "9" "1.10849992580660e-15" "1" "8.68853042407226e-05" "(deoxy)ribose phosphate degradation" "AraCyc" "9" "2.52469240683073e-10" "1" "0.00436022397901734" "arginine degradation II" "AraCyc" "9" "3.08741808689523e-07" "1" "0.0129393335855368" "arginine degradation III" "AraCyc" "9" "2.52341780442083e-10" "1" "0.00288749037258912" "arginine degradation V" "AraCyc" "9" "5.088423761354e-10" "1" "0.00520183075916384" "biosynthesis of proto- and siroheme" "AraCyc" "9" "4.64792364449142e-05" "1" "0.0546490974380768" "biotin biosynthesis I" "AraCyc" "9" "5.15012004750687e-11" "1" "0.00436022397901734" "chlorophyll biosynthesis" "AraCyc" "9" "0.000378607307837513" "1" "0.082988144951427" "glutamate degradation I" "AraCyc" "9" "4.13508498212538e-11" "1" "0.00225898931163793" "IAA biosynthesis" "AraCyc" "9" "3.44851803493112e-08" "1" "0.00520183075916384" "lysine biosynthesis I" "AraCyc" "9" "8.9036596772232e-09" "1" "0.0104112676640524" "amino acid metabolism" "FunCat" "9" "2.52169069478674e-05" "1" "0.0334766868558988" "Arginine and proline metabolism" "KEGG" "9" "2.85970559881454e-07" "1" "0.0190933386199809" "Biodegradation of Xenobiotics" "KEGG" "9" "3.75377795529655e-21" "1" "2.50799323845023e-05" "Nicotinate and nicotinamide metabolism" "KEGG" "9" "5.75976952443961e-06" "1" "0.0651870464071369" "Nucleotide Metabolism" "KEGG" "9" "2.37728043725233e-05" "1" "0.056971024889416" "Pantothenate and CoA biosynthesis" "KEGG" "9" "1.7058711501831e-10" "1" "0.00450790056149715" "Pyrimidine metabolism" "KEGG" "9" "4.52279848995823e-08" "1" "0.0174034411134287" "Urea cycle and metabolism of amino groups" "KEGG" "9" "1.30808537961143e-09" "1" "0.00646822113926448" "starch metabolism" "BioPath" "8" "9.97932168760928e-10" "1" "0.00526309268359516" "starch degradation" "AraCyc" "8" "1.75367662258615e-07" "1" "0.00813221231856827" "energy" "FunCat" "8" "4.70649136737891e-19" "1" "2.22201468914168e-05" "metabolism of energy reserves (e.g. glycogen, trehalose)" "FunCat" "8" "9.85341786911487e-23" "1" "0" "Starch and sucrose metabolism" "KEGG" "8" "0.000455618155250506" "1" "0.0556407166824478" "HORMONE DATA SET" "quantDE" "1.534536" "maxDE" "4.5130406" "HORMONE DATA SET" "Biosynthesis of Amino Acids and Derivatives" "BioPath" "28" "8.85121984870492e-09" "6" "0.000791119551374574" "Phenylpropanoid Metabolism" "BioPath" "25" "2.09100834744270e-07" "5" "0.00527713010661537" "tryptophan biosynthesis" "AraCyc" "22" "1.75883692848199e-25" "3" "2.24080999982100e-05" "Aromatic amino acid (Phe, Tyr, Trp) metabolism" "BioPath" "20" "5.6840443313738e-13" "2" "0.0156609675687042" "tryptophan biosynthesis" "TAIR-GO" "20" "4.37904852611832e-24" "2" "0.000185352124811279" "amino acid metabolism" "FunCat" "20" "1.59889019292476e-10" "4" "0.000287816404528269" "Phenylalanine, tyrosine and tryptophan biosynthesis" "KEGG" "20" "2.15050078532842e-17" "2" "0.00145371329765386" "Shikimate pathway" "LitPath" "20" "3.71405952106115e-14" "2" "0.00335530733375786" "Trp biosyntesis" "LitPath" "20" "3.02316323495825e-21" "2" "0.000249806393178012" "assimilation of ammonia, metabolism of the glutamate group" "FunCat" "14" "9.4324342513644e-15" "2" "0.000238649800141876" "cysteine biosynthesis I" "AraCyc" "13" "3.56539518331087e-11" "2" "0.00214311939538031" "Arginine and proline metabolism" "KEGG" "12" "9.46458407166502e-10" "2" "0.00135699472539045" "Urea cycle and metabolism of amino groups" "KEGG" "12" "7.51685273019324e-13" "2" "0.000254681857906189" "Glutamate/glutamine from nitrogen fixation" "BioPath" "10" "2.55892071385213e-09" "1" "0.00674782118546649" "Leaf Glycerolipid Biosynthesis in cytosol / ER" "BioPath" "10" "6.92385901698622e-07" "1" "0.0339834584893834" "jasmonic acid biosynthesis" "TAIR-GO" "10" "9.38698624696636e-10" "1" "0.00753876155453254" "response to wounding" "TAIR-GO" "10" "1.43410904159291e-08" "1" "0.0100601207937122" "jasmonic acid biosynthesis" "AraCyc" "10" "8.07459819799637e-10" "1" "0.00630280839138155" "nitrogen and sulfur utilization " "FunCat" "10" "1.39454897415356e-12" "1" "0.00187540185365378" "stress response" "FunCat" "10" "0" "2" "0" "D-Glutamine and D-glutamate metabolism" "KEGG" "10" "7.25778335903097e-19" "1" "8.2889059491774e-05" "Glutamate metabolism" "KEGG" "10" "1.41669315755727e-06" "1" "0.0219118640849144" "Nitrogen metabolism" "KEGG" "10" "4.16092686846431e-07" "1" "0.0124717439491282" "Lipid signaling" "AcylLipid" "10" "0.00516901916066031" "1" "0.155252361715840" "Synthesis of membrane lipids in endomembrane system" "AcylLipid" "10" "6.91373557709595e-06" "1" "0.0262060410830031" "Glutathione metabolism" "BioPath" "8" "0.0097430045383777" "2" "0.0285686740092863" "Folding, Sorting and Degradation" "KEGG" "8" "0.00536904392176997" "2" "0.0187284741533302" "Protein folding and associated processing" "KEGG" "8" "7.55075789938646e-08" "2" "0.000324895115511236" "defense response" "TAIR-GO" "7" "8.31777427383828e-06" "1" "0.0083423102963036" "L-serine biosynthesis" "TAIR-GO" "7" "2.41227580214246e-14" "1" "4.72554698206317e-05" "salicylic acid biosynthesis" "TAIR-GO" "7" "4.53304393711057e-14" "1" "4.72554698206317e-05" "cysteine biosynthesis II" "AraCyc" "7" "7.90483530463556e-08" "1" "0.0102078046819850" "phosphoglycerate dehydrogenase, cysteine biosynthesis II" "AraCyc" "7" "6.70041405339911e-16" "1" "4.40399958444312e-05" "phosphoglycerate dehydrogenase, serine biosynthesis" "AraCyc" "7" "6.70041405339911e-16" "1" "4.40399958444312e-05" "serine biosynthesis" "AraCyc" "7" "1.06364079907137e-10" "1" "0.000905702397192738" "MUTANT DATA SET" "quantDE" "1.573414" "maxDE" "4.89686767" "MUTANT DATA SET"