"Pathway"	"Pathway.source"	"V3"	"V4"	"V5"	"V6"
"IN THREE DATA SETS"		"sum.of.scores"	"sum.of.genes"		
"Glucosinolate Metabolism"	"LitPath"	50	5		
"lactose degradation IV"	"AraCyc"	45	10		
"ORGAN DATA SET"	"quantDE"	7.148668	"maxDE"	8.304097	"ORGAN DATA SET"
"Stilbene, coumarine and lignin biosynthesis"	"KEGG"	26	1.627311149125E-022	9	0.0000000187441877278318
"Miscellaneous acyl lipid metabolism"	"AcylLipid"	20	0.00000841779181002985	7	0.00180629578318849
"monoterpenoid biosynthesis"	"TAIR-GO"	19	3.6652769189185E-039	2	0.000000380303867413632
"mono-/sesqui-/di-terpene biosynthesis"	"LitPath"	19	0.0000000253505388477714	2	0.0508208416132439
"monoterpene biosynthesis"	"LitPath"	19	9.50297198483918E-020	2	0.000179982329098447
"terpenoid metabolism"	"LitPath"	19	0.000000027937907724488	2	0.0550871349632537
"Phenylpropanoid Metabolism"	"BioPath"	18	0.0000000000238292012318828	4	0.000590385722154972
"triterpene, sterol, and brassinosteroid metabolism"	"LitPath"	17	0.0154142089465999	4	0.0313395955542677
"detoxification"	"FunCat"	16	0	5	0
"Methane metabolism"	"KEGG"	16	0.0000000000000139432237077087	8	0.0000000465399350293398
"Phenylalanine metabolism"	"KEGG"	16	0.00000000000245731415951735	8	0.0000000878282877165142
"Prostaglandin and leukotriene metabolism"	"KEGG"	16	7.32124804240085E-018	8	0.00000000635933886603734
"isoprenoid biosynthesis "	"FunCat"	14	0.000000000122163548255319	3	0.000747121023364839
"lipid, fatty acid and isoprenoid biosynthesis "	"FunCat"	14	0.0000000000185769187646436	3	0.000435129726452783
"Biosynthesis of steroids"	"KEGG"	13	0.0000000322967659125001	2	0.00975652494894922
"triterpene biosynthesis"	"LitPath"	13	0.00000000188664385570734	2	0.00197480745485727
"detoxification involving cytochrome P450 "	"FunCat"	12	4.50902563283731E-023	3	0.000000889937241128822
"secondary metabolism"	"FunCat"	11	0.00000000374827540779294	4	0.0000458120787071988
"Glucosyltransferases for benzoic acids"	"BioPath"	10	0.000000000000151707874149836	1	0.00142447215594938
"fatty acid metabolism"	"TAIR-GO"	10	0.000000000202070758102511	1	0.00658460430420183
"tryptophan catabolism"	"TAIR-GO"	10	3.73320864944275E-022	1	0.000023368089471741
"glucosinolate biosynthesis from tryptophan"	"AraCyc"	10	5.35910386021198E-018	1	0.0000641833657610817
"IAA biosynthesis"	"AraCyc"	10	0.00000000000446154863772763	1	0.00137638308807434
"IAA biosynthesis I"	"AraCyc"	10	0.0000000000000891278321239327	1	0.000757177921296863
"lactose degradation IV"	"AraCyc"	10	2.1263615871397E-018	2	0.00000316037807961629
"Ascorbate and aldarate metabolism"	"KEGG"	10	0.00000000601537879299109	1	0.0241686589798504
"Fluorene degradation"	"KEGG"	10	0.0000000000315572456840684	1	0.00899310249259861
"gamma-Hexachlorocyclohexane degradation"	"KEGG"	10	0.000000000156184140794939	1	0.01150610230211
"Fatty acid elongation and wax and cutin metabolism"	"AcylLipid"	10	0.00269428431520828	1	0.36706583397054
"fatty acid modulation"	"LitPath"	10	0.000000000000411971375710719	1	0.000742893635877853
"Glucosinolate Metabolism"	"LitPath"	10	0.0100260212181138	1	0.095586357296971
"monoterpene biosynthesis"	"AraCyc"	9	3.84405962924314E-016	1	0.0000641833657610817
"plant monoterpene biosynthesis"	"AraCyc"	9	1.85740065134567E-018	1	0.0000214553825908767
"storage protein"	"FunCat"	8	1.87972414018406E-016	2	0.00000302909434945618
"pentacyclic triterpenoid biosynthesis"	"TAIR-GO"	7	0.00000000022313459150291	1	0.000643700662803448
"STRESS DATA SET"	"quantDE"	3.518833	"maxDE"	9.108517	"STRESS DATA SET"
"HORMONE DATA SET"	"quantDE"	2.349433	"maxDE"	5.9232073	"HORMONE DATA SET"
"Intermediary Carbon Metabolism"	"BioPath"	56	0.000000000058320337702452	10	0.00655704707466442
"Biosynthesis of Amino Acids and Derivatives"	"BioPath"	50	0.0000193673060723919	8	0.0593641396861021
"C-compound and carbohydrate metabolism"	"FunCat"	46.5	0.0274580061103433	11	0.0470972813245186
"amino acid metabolism"	"FunCat"	36	0.0000752593001339062	5	0.0573284739857194
"tricarboxylic-acid pathway (citrate cycle, Krebs cycle, TCA cycle)"	"FunCat"	30	0.0000714064858981519	6	0.0178910309226104
"Glucosinolate Metabolism"	"LitPath"	30	1.03175737287777E-015	3	0.00105024579566756
"glycolysis and gluconeogenesis"	"FunCat"	28.5	0.00337639917808277	6	0.0365579386510673
"Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone)"	"BioPath"	28	0.00647816826762818	4	0.102988910384797
"formaldehyde assimilation I (serine pathway)"	"AraCyc"	28	0.00000000614229085261672	4	0.0170445016384957
"serine-isocitrate lyase pathway"	"AraCyc"	28	0.0000290378132367072	4	0.0561976509138969
"TCA cycle -- aerobic respiration"	"AraCyc"	28	0.0000125501097583454	5	0.0206079938988432
"TCA cycle variation IV"	"AraCyc"	28	0.00000804928755856765	5	0.0168747906076625
"TCA cycle variation VII"	"AraCyc"	28	0.0158733943144556	5	0.1056654895572
"TCA cycle variation VIII"	"AraCyc"	28	0.0000632168838643611	5	0.0248660723541735
"Citrate cycle (TCA cycle)"	"KEGG"	28	0.000000000278567520335581	5	0.000808900964929431
"Gluconeogenesis from lipids in seeds"	"BioPath"	26	0.00000733352554135622	6	0.00383528280599496
"gluconeogenesis"	"AraCyc"	26	0.000117512266851051	4	0.0561976509138969
"phenylalanine degradation I"	"AraCyc"	26	0.00000000549835102653549	3	0.0345465779425112
"acetate fermentation"	"AraCyc"	25	0.00639223695952541	4	0.208686298984479
"fructose degradation (anaerobic)"	"AraCyc"	25	0.00295814762328393	4	0.168155013574154
"glycolysis IV"	"AraCyc"	25	0.00327464812144571	4	0.175998442281458
"sorbitol fermentation"	"AraCyc"	25	0.00699245019033471	4	0.192091722948259
"acetyl-CoA assimilation"	"AraCyc"	24	0.0000104303898790703	4	0.015013799910993
"mixed acid fermentation"	"AraCyc"	24	0.00000322310525245038	4	0.0216346227564379
"Methionine metabolism"	"KEGG"	22	0.0000000000367712188361068	4	0.000166533361531795
"indoleacetic acid biosynthesis"	"TAIR-GO"	20	8.76730420944664E-022	2	0.000301163575073087
"glucosinolate biosynthesis from phenylalanine"	"AraCyc"	20	1.28757393474132E-016	2	0.000384404842308384
"Carbon fixation"	"KEGG"	20	0.00757516014491202	3	0.104835911683463
"Nitrogen metabolism"	"KEGG"	20	0.0000862586472833435	2	0.0575464050022964
"monoterpenoid biosynthesis"	"TAIR-GO"	19	4.30391912447556E-021	2	0.000123292845517424
"Oxidative phosphorylation"	"KEGG"	19	0.00098435330062549	4	0.0506787318430289
"Sulfur metabolism"	"KEGG"	19	0.000000997473424002633	2	0.0217881788817075
"mono-/sesqui-/di-terpene biosynthesis"	"LitPath"	19	0.00000021628276373855	2	0.044144277270024
"monoterpene biosynthesis"	"LitPath"	19	1.26432419238793E-018	2	0.00015190644598121
"terpenoid metabolism"	"LitPath"	19	0.000000237528885882887	2	0.0479017987948161
"formylTHF biosynthesis"	"AraCyc"	18	0.000000151173762434922	3	0.00834049490253
"methionine biosynthesis II"	"AraCyc"	18	0.000000043867196749367	3	0.00233997478995587
"Translation factors"	"KEGG"	18	0.0113516243564048	4	0.089001332001229
"Synthesis of membrane lipids in endomembrane system"	"AcylLipid"	18	0.000000054679324808352	3	0.0220596835520905
"Chlorophyll biosynthesis and breakdown"	"BioPath"	16	0.0012264471585095	2	0.0754468486720889
"chlorophyll biosynthesis"	"TAIR-GO"	16	0.00000034740181487549	2	0.00890792862261234
"aspartate degradation I"	"AraCyc"	16	0.00766031803465463	2	0.118124951549445
"aspartate degradation II"	"AraCyc"	16	0.0000246980339866871	2	0.0355803354862733
"de novo biosynthesis of purine nucleotides II"	"AraCyc"	16	0.000288481317762665	2	0.221643862023729
"glyoxylate cycle"	"AraCyc"	16	0.00198389763186882	2	0.0888935641655853
"lactose degradation IV"	"AraCyc"	16	3.83193152748006E-015	4	0.00000404913562752576
"TCA cycle variation II"	"AraCyc"	16	0.00000248094144387294	2	0.0417629857342684
"Alanine and aspartate metabolism"	"KEGG"	16	0.000083096119646328	2	0.0531897177468394
"Cyanoamino acid metabolism"	"KEGG"	16	0.000000178105125282309	2	0.0306515392980914
"Glyoxylate and dicarboxylate metabolism"	"KEGG"	16	0.0000229780355857433	2	0.0411339406684565
"Reductive carboxylate cycle (CO2 fixation)"	"KEGG"	16	0.000000262510942507386	2	0.0167873120224509
"dTDP-rhamnose biosynthesis"	"AraCyc"	15	0.026945977930586	2	0.32403739419433
"mannitol degradation"	"AraCyc"	15	0.0000702917542562921	2	0.108014911052046
"sorbitol degradation"	"AraCyc"	15	0.000115443981082413	2	0.118124951549445
"nucleotide metabolism"	"FunCat"	15	0	2	0
"purine nucleotide metabolism"	"FunCat"	15	0.000000118015469701686	2	0.0177033649121854
"transport "	"FunCat"	15	1.92880869256812E-023	3	0
"Methionin/SAM/ethylene metabolism from cysteine and aspartate"	"BioPath"	14	0.000245667543728289	2	0.0598332624220128
"C-compound and carbohydrate regulation of C-compound and carbohydrate utilization "	"FunCat"	14	0	2	0
"C-compound and carbohydrate utilization "	"FunCat"	14	0	2	0
"regulation of C-compound and carbohydrate utilization "	"FunCat"	14	0	2	0
"Selenoamino acid metabolism"	"KEGG"	14	0.00329259352610867	2	0.0490002026117655
"Flavonoid and anthocyanin metabolism"	"BioPath"	13	0.00116001968969829	3	0.0821116062677224
"transport ATPases"	"FunCat"	13	0.000163991325521239	2	0.0534641621119259
"transport facilitation"	"FunCat"	13	0	2	0.0000189145983097641
"Phosphatidylinositol signaling system"	"KEGG"	13	0.0020650226100772	2	0.0667486672040211
"Signal Transduction"	"KEGG"	13	0.00296221982169275	2	0.0715874285422282
"ascorbic acid biosynthesis"	"BioPath"	12	0.000045576762507326	2	0.0237660430778233
"core phenylpropanoid metabolism"	"BioPath"	12	0.0492716728243141	2	0.152562460902322
"protein folding"	"TAIR-GO"	12	0	2	0
"response to heat"	"TAIR-GO"	12	0.000000589848105050387	2	0.00563687386371442
"ascorbate glutathione cycle"	"AraCyc"	12	0.00198443685421936	2	0.0355803354862733
"galactose degradation I"	"AraCyc"	12	0.000000000642697767564118	3	0.000142922214371086
"histidine biosynthesis"	"AraCyc"	12	0.000619175581017678	2	0.0355803354862733
"histidine biosynthesis I"	"AraCyc"	12	0.000197423989018564	2	0.0299095790203423
"methionine and S-adenosylmethionine synthesis"	"AraCyc"	12	0.0000000556394172222002	3	0.0000635661693747659
"One carbon pool by folate"	"KEGG"	12	0.0000000755513175153169	2	0.006047596033933
"Protein folding and associated processing"	"KEGG"	12	0.000235624088249838	2	0.0339674592379607
"Fatty acid elongation and wax and cutin metabolism"	"AcylLipid"	12	0.000528309083512384	3	0.0388004639023513
"aspartate/ornithin cycle / nitric oxid from glutamate"	"BioPath"	10	0.00000146417272093808	1	0.0646834940845
"Glutamate/glutamine from nitrogen fixation"	"BioPath"	10	0.000199456548227599	1	0.0565242621976487
"Tocopherol biosynthesis"	"BioPath"	10	0.0000000752682784960216	1	0.00847172198890495
"UDP-carbohydrate metabolism"	"BioPath"	10	0.000736878975775547	1	0.140930678328581
"glucosinolate biosynthesis"	"TAIR-GO"	10	0.0000178687163981709	1	0.0250599901779767
"glutamine biosynthesis"	"TAIR-GO"	10	0	1	0
"indole glucosinolate biosynthesis"	"TAIR-GO"	10	0	1	0
"methionine biosynthesis"	"TAIR-GO"	10	0.00000000321015476339882	1	0.00583556758649356
"response to red light"	"TAIR-GO"	10	0	1	0
"shade avoidance"	"TAIR-GO"	10	0	1	0
"sugar mediated signaling"	"TAIR-GO"	10	0.000000261731294700826	1	0.0139934901491228
"tryptophan biosynthesis"	"TAIR-GO"	10	0.00154877554641784	1	0.101249152355182
"vitamin E biosynthesis"	"TAIR-GO"	10	0.0000000111305707830403	1	0.00583556758649356
"alanine biosynthesis II"	"AraCyc"	10	0.0454736455232016	1	0.32604013221335
"ammonia assimilation cycle"	"AraCyc"	10	0.00139789053805534	1	0.0626178603701129
"glucosinolate biosynthesis from tryptophan"	"AraCyc"	10	0.00000026308209923402	1	0.00627708842851002
"glutamine biosynthesis I"	"AraCyc"	10	0.000489250109770025	1	0.0388283592451556
"glyceraldehyde 3-phosphate degradation"	"AraCyc"	10	0.0324196165222817	2	0.0888935641655853
"homocysteine and cysteine interconversion"	"AraCyc"	10	0.00031298286637565	1	0.0759315699325532
"nitrate assimilation pathway"	"AraCyc"	10	0.00715597166249297	1	0.0759315699325532
"phenylalanine biosynthesis II"	"AraCyc"	10	0.0136278390980054	1	0.273489686151289
"tyrosine degradation"	"AraCyc"	10	0.0000438700538423301	1	0.0759315699325532
"UDP-N-acetylglucosamine biosynthesis"	"AraCyc"	10	0.0000355605986223185	1	0.0388283592451556
"vitamin E biosynthesis"	"AraCyc"	10	0.000267694657890343	1	0.0388283592451556
"assimilation of ammonia, metabolism of the glutamate group"	"FunCat"	10	0.00405292647680895	1	0.108417461091873
"biosynthesis of phenylpropanoids"	"FunCat"	10	0.010432521947063	1	0.232907410520034
"biosynthesis of secondary products derived from L-phenylalanine and L-tyrosine"	"FunCat"	10	0.010432521947063	1	0.232907410520034
"nitrogen and sulfur metabolism"	"FunCat"	10	0.00492764374665414	1	0.099778023360474
"nitrogen and sulfur utilization "	"FunCat"	10	0.0000191689176755217	1	0.0337289003287555
"Alkaloid biosynthesis I"	"KEGG"	10	0.00647110756137492	1	0.123053189851724
"Cysteine metabolism"	"KEGG"	10	0.0259032049038297	1	0.171378017137296
"Novobiocin biosynthesis"	"KEGG"	10	0.00004894510684408	1	0.0487344373976833
"Peptidoglycan biosynthesis"	"KEGG"	10	0.0000000791573090425318	1	0.00721974039145902
"chlorophyll biosynthesis"	"LitPath"	10	0.0000608197772059428	1	0.0214180303330172
"tocopherol (vitamin E) biosynthesis"	"LitPath"	10	0.00000000000165808887385347	1	0.000664694305785447
"Leaf Glycerolipid Biosynthesis in cytosol / ER"	"BioPath"	9	0.0339518456932874	1	0.228501626466877
"abscisic acid mediated signaling"	"TAIR-GO"	9	0.000000034927659726524	1	0.00583556758649356
"adenosine salvage"	"TAIR-GO"	9	0.0000000000129312007144346	1	0.00101417508307356
"dTDP-rhamnose biosynthesis"	"TAIR-GO"	9	0	1	0
"negative regulation of signal transduction"	"TAIR-GO"	9	0	1	0
"negative regulation of transcription"	"TAIR-GO"	9	0	1	0
"nutrient import"	"TAIR-GO"	9	0	1	0
"phosphoinositide-mediated signaling"	"TAIR-GO"	9	0	1	0
"regulation of transcription"	"TAIR-GO"	9	0	1	0
"response to abiotic stimulus"	"TAIR-GO"	9	0.000000000000959269241411771	1	0.00101417508307356
"response to cold"	"TAIR-GO"	9	0.00000278777019970083	1	0.0191883401286688
"signal transduction"	"TAIR-GO"	9	0	1	0
"sulfur metabolism"	"TAIR-GO"	9	0	1	0
"monoterpene biosynthesis"	"AraCyc"	9	0.00000179157304407696	1	0.00627708842851002
"plant monoterpene biosynthesis"	"AraCyc"	9	0.0000000136653064776338	1	0.00215871261681891
"eukaryotic plasma membrane / membrane attached "	"FunCat"	9	0.000000000000801029760971238	1	0.00211705101569531
"stress response"	"FunCat"	9	0	1	0
"Transcription (chloroplast)"	"BioPath"	8	0.0000320821825764293	1	0.0171046315234825
"response to reactive oxygen species"	"TAIR-GO"	8	0	1	0
"transcription initiation"	"TAIR-GO"	8	0.0000979997831662863	1	0.0250599901779767
"GDP-D-rhamnose biosynthesis"	"AraCyc"	8	0.00317576697490804	2	0.016024117265169
"toxin catabolism"	"TAIR-GO"	7	0.0421448581844735	4	0.0131671528789616
"MUTANT DATA SET"	"quantDE"	4.014691	"maxDE"	7.131072912	"MUTANT DATA SET"
"Photosystems "	"BioPath"	316	5.61756017627197E-146	44	2.62359694423686E-023
"additional photosystem II components"	"BioPath"	140	1.51487547861983E-070	17	0.000000000155090860727738
"Chlorophyll a/b binding proteins"	"BioPath"	120	9.0489330282665E-094	15	1.59726129153931E-015
"C-compound and carbohydrate metabolism"	"FunCat"	119	0.000000407868599237083	16	0.0734766722900685
"Photosystem I"	"BioPath"	116	2.66321886540505E-034	19	0.00000000519752064230791
"glycolysis and gluconeogenesis"	"FunCat"	109	3.48199650199118E-026	14	0.000162940041817508
"Intermediary Carbon Metabolism"	"BioPath"	108	0.000224000131868406	15	0.198317750619513
"Photosynthesis"	"KEGG"	106	5.19685578006316E-092	16	1.40108575602735E-016
"biogenesis of chloroplast"	"FunCat"	85	1.6653834718829E-026	13	0.000000239001658813855
"photosynthesis"	"FunCat"	85	7.08607482933518E-040	11	0.000000239163787151051
"Carbon fixation"	"KEGG"	73	3.855620513022E-027	10	0.0000207623327324669
"Photosystem II"	"BioPath"	68	0.0000000000000104941516682867	9	0.000777336711643624
"transport "	"FunCat"	66	0	9	0
"chlorophyll binding"	"TAIR-GO"	58	6.83294564716837E-044	7	0.0000000829430612357689
"photosystem I"	"TAIR-GO"	58	0	7	0
"acetate fermentation"	"AraCyc"	58	4.78690793692183E-017	9	0.00112674028287859
"fructose degradation (anaerobic)"	"AraCyc"	58	2.54684980659306E-018	9	0.000608001762705791
"glycolysis I"	"AraCyc"	58	0.00000908320550051545	9	0.0774187323290151
"glycolysis IV"	"AraCyc"	58	3.72812812102738E-018	9	0.00069162324723399
"sorbitol fermentation"	"AraCyc"	58	6.78649164298781E-017	9	0.000887460199200568
"Gluconeogenesis from lipids in seeds"	"BioPath"	54	0.00168897617634381	8	0.0949181884956377
"gluconeogenesis"	"AraCyc"	54	4.94154057768933E-019	8	0.000190583114900509
"Glycolysis / Gluconeogenesis"	"KEGG"	54	0.00000000000485542148257658	8	0.0019971032031955
"photosystem II"	"TAIR-GO"	50	0	6	0
"glycerol degradation II"	"AraCyc"	48	3.16219923799522E-017	7	0.000999175214706937
"respiration"	"FunCat"	44	1.54382496982344E-026	6	0.00000144333019950279
"photosynthesis"	"TAIR-GO"	42	2.50556472305189E-019	6	0.0000643696282866385
"Calvin cycle"	"AraCyc"	42	3.85786642891832E-015	6	0.00166927897154181
"glyceraldehyde 3-phosphate degradation"	"AraCyc"	42	1.4019882500017E-024	6	0.0000591460065458067
"aerobic respiration"	"FunCat"	40	1.95283727580689E-022	5	0.0000254009781764823
"photosystem II type I  chlorophyll a /b binding protein"	"BioPath"	36	0	4	0
"chlorophyll biosynthesis"	"AraCyc"	36	0.00000255744889815451	4	0.0957885986737848
"Selenoamino acid metabolism"	"KEGG"	36	0.00000000000315921043682301	5	0.00068169053859453
"Methionine metabolism"	"KEGG"	34	2.98568325611378E-017	5	0.0000605812669496468
"light harvesting complex"	"BioPath"	30	1.53995943158337E-020	4	0.0000187960619593351
"Methionin/SAM/ethylene metabolism from cysteine and aspartate"	"BioPath"	30	0.00254609204009216	4	0.0901317656350257
"transport facilitation"	"FunCat"	30	0	4	0
"Porphyrin and chlorophyll metabolism"	"KEGG"	30	0.00000000849390941682342	4	0.00278234919586523
"Miscellaneous acyl lipid metabolism"	"AcylLipid"	28	2.581086118805E-017	7	0.000165757588564035
"Cytochrome b6/f complex"	"BioPath"	26	0.0000000000000631861431621152	3	0.0038225710106486
"photosystem I subunit precursor"	"BioPath"	26	0	5	0
"ATP synthase components"	"BioPath"	24	0.00000000243350659810074	3	0.00597014375671356
"Oxygen-evolving enhancer protein"	"BioPath"	24	5.94817876678388E-019	3	0.000197069858489278
"photosystem II type II  chlorophyll a /b binding protein"	"BioPath"	24	4.6135143990378E-020	3	0.0000420975302742505
"photosynthesis light harvesting"	"TAIR-GO"	24	1.44185289287019E-015	3	0.000568687451698178
"photosynthesis light harvesting in photosystem I"	"TAIR-GO"	24	4.67753770452983E-018	3	0.000297274708110095
"Pentose phosphate pathway"	"KEGG"	24	0.0000126475571302997	4	0.0170183843168972
"Glyoxylate and dicarboxylate metabolism"	"KEGG"	22	0.00000290891999309336	3	0.0188477896018878
"Plastocyanin"	"BioPath"	20	0	2	0
"ATP synthesis coupled proton transport"	"TAIR-GO"	20	6.59493695278056E-015	2	0.00161969390705344
"chlorophyll biosynthesis"	"TAIR-GO"	20	0.0000970148359212578	2	0.0405666316071129
"photosynthetic water oxidation"	"TAIR-GO"	20	0	2	0
"proton transport"	"TAIR-GO"	20	6.59493695278056E-015	2	0.00161969390705344
"formaldehyde assimilation I (serine pathway)"	"AraCyc"	20	0.000589776870713499	4	0.0177807350962149
"methionine degradation I"	"AraCyc"	20	0.0000000000503910660198359	3	0.00079934620092651
"serine-isocitrate lyase pathway"	"AraCyc"	20	0.0492972958972027	4	0.0583474314039576
"sulfate assimilation III"	"AraCyc"	20	0.0474622703864464	3	0.0671157660345205
"chlorophyll and phytochromobilin metabolism"	"LitPath"	20	0.00000000784532265677686	2	0.0214535819265502
"chlorophyll biosynthesis"	"LitPath"	20	8.11889670929687E-019	2	0.000432519237716207
"calmodulin binding"	"TAIR-GO"	19	0.0000000209375448965341	2	0.0332103120471369
"lactose degradation IV"	"AraCyc"	19	9.96376727376067E-019	4	0.00000427033898737457
"nonphotochemical quenching"	"TAIR-GO"	18	0	2	0
"energy"	"FunCat"	18	0	3	0
"Citrate cycle (TCA cycle)"	"KEGG"	18	0.0119161141885485	3	0.0644570372398188
"Galactose metabolism"	"KEGG"	18	0.00157134071911937	2	0.106654738623845
"Glycine, serine and threonine metabolism"	"KEGG"	18	0.00360889587498555	3	0.043174948586468
"Reductive carboxylate cycle (CO2 fixation)"	"KEGG"	18	0.00000297994644449518	3	0.00561470762937224
"starch biosynthesis"	"TAIR-GO"	17	0.0000000728282539822041	2	0.00521286106420536
"photosystem I reaction center"	"BioPath"	16	0.000000234898888641466	4	0.000321727198241295
"cytochrome b6f complex"	"TAIR-GO"	16	0.000000000174377083091962	2	0.00310618119730739
"photosynthesis light harvesting in photosystem II"	"TAIR-GO"	16	0.0000000000084213323368193	2	0.00161969390705344
"PSII associated light-harvesting complex II"	"TAIR-GO"	16	0	2	0
"response to heat"	"TAIR-GO"	16	0.0000102997396665497	2	0.0266207749820118
"Cysteine metabolism"	"KEGG"	16	0.00377133260205615	2	0.077145171657235
"Protein folding and associated processing"	"KEGG"	16	0.000101882835620761	2	0.070420691438057
"Sulfur metabolism"	"KEGG"	16	0.00400410143988012	2	0.0464154772190739
"electron transport"	"TAIR-GO"	14	0.0218381011957356	2	0.099553545016924
"photosynthetic electron transport"	"TAIR-GO"	14	0.0000000230910488131107	2	0.00310618119730739
"photosystem II antenna complex"	"TAIR-GO"	14	9.25044067714558E-015	2	0.000176215970293191
"methionine and S-adenosylmethionine synthesis"	"AraCyc"	14	0.00000000252491879497426	3	0.0000663125111281774
"methionine biosynthesis II"	"AraCyc"	14	0.0000945436719488105	2	0.0207102840053576
"accessory proteins of electron transport and membrane-associated energy conservation"	"FunCat"	14	4.18546593445451E-016	2	0.0000869441459121708
"C-compound, carbohydrate catabolism"	"FunCat"	14	0.040824923003742	3	0.107649726786736
"electron transport and membrane-associated energy conservation "	"FunCat"	14	0.0000000513437888115331	2	0.00598628534782046
"translation"	"FunCat"	14	0.000050219039961401	2	0.0568050936446196
"ATP synthesis"	"KEGG"	14	0.0489201500278333	2	0.185408491033678
"aspartate degradation II"	"AraCyc"	12	0.0075689482412952	2	0.0365668023191515
"TCA cycle variation II"	"AraCyc"	12	0.00178616501400883	2	0.0429052672843704
"accessory proteins of photosynthetic electron transport "	"FunCat"	12	0	2	0
"Translation (chloroplast)"	"BioPath"	10	0.00230835590025394	1	0.104758347398799
"aging"	"TAIR-GO"	10	0.00110890547859074	1	0.0709556122944677
"chloroplast ATP synthase complex"	"TAIR-GO"	10	0.00000000546745227039265	1	0.00317027080499952
"extrinsic to photosynthetic water oxidation"	"TAIR-GO"	10	0	1	0
"glucosinolate biosynthesis"	"TAIR-GO"	10	0.0108960286097013	1	0.0709556122944677
"glycolysis"	"TAIR-GO"	10	0.00000000260793036029234	1	0.00317027080499952
"magnesium chelatase complex"	"TAIR-GO"	10	0.000000000179520815489839	1	0.00317027080499952
"methionine biosynthesis"	"TAIR-GO"	10	0.00000772622109791961	1	0.0176410266464144
"methylation-dependent chromatin silencing"	"TAIR-GO"	10	0	1	0
"pentose-phosphate shunt"	"TAIR-GO"	10	0.00905542008651722	2	0.0266207749820118
"photosynthetic electron transport in cytochrome b6/f"	"TAIR-GO"	10	0.0000000000168119581973641	1	0.00317027080499952
"photosystem II assembly"	"TAIR-GO"	10	0.0000000108321791657634	1	0.00915838047441219
"photosystem II stabilization"	"TAIR-GO"	10	0.000000000479826831064966	1	0.00317027080499952
"posttranscriptional gene silencing"	"TAIR-GO"	10	0	1	0
"proton-transporting ATP synthase, catalytic core (sensu Eukaryota)"	"TAIR-GO"	10	0	1	0
"response to chemical substance"	"TAIR-GO"	10	0	1	0
"response to oxidative stress"	"TAIR-GO"	10	0.000000282477053453535	1	0.0283219151393217
"response to stress"	"TAIR-GO"	10	0.0000181223285273801	1	0.0176410266464144
"response to sucrose stimulus"	"TAIR-GO"	10	0.0000389248006461545	1	0.0409297821103288
"response to toxin"	"TAIR-GO"	10	0	1	0
"xenobiotic catabolism"	"TAIR-GO"	10	0	1	0
"ammonia assimilation cycle"	"AraCyc"	10	0.0034673712919593	1	0.0638249764768086
"flavonol biosynthesis"	"AraCyc"	10	0.00482332452775485	1	0.242088053543514
"glutamine biosynthesis I"	"AraCyc"	10	0.00127470260592592	1	0.0396029360665414
"homocysteine and cysteine interconversion"	"AraCyc"	10	0.000830751169270042	1	0.07737020869658
"homomethionine biosynthesis"	"AraCyc"	10	0	1	0
"leucine biosynthesis"	"AraCyc"	10	0.00215169382243739	1	0.172094088161495
"mannitol degradation"	"AraCyc"	10	0.0357948629779256	2	0.11065585470208
"nitrate assimilation pathway"	"AraCyc"	10	0.0161192644278362	1	0.07737020869658
"octane oxidation"	"AraCyc"	10	0.0357948629779256	1	0.07737020869658
"sorbitol degradation"	"AraCyc"	10	0.0459665509227734	2	0.120971552429616
"chloroplast transport "	"FunCat"	10	0.000518671961966996	1	0.0702980713390153
"electron / hydrogen transport "	"FunCat"	10	0.00000476328986802304	1	0.0263327541556997
"sugar, glucoside, polyol and carboxylate catabolism "	"FunCat"	10	0.00126427946643093	2	0.0266465000211713
"transport routes "	"FunCat"	10	0.01736031465595	1	0.190297598024675
"transported compounds (substrates)"	"FunCat"	10	0	1	0
"Peptidoglycan biosynthesis"	"KEGG"	10	0.00000352083316205627	1	0.01279529972953
"Glucosinolate Metabolism"	"LitPath"	10	0.00044012942851864	1	0.048173528550427
"adenosine salvage"	"TAIR-GO"	9	0.0000000244474550884177	1	0.00317027080499952
"carbohydrate biosynthesis"	"TAIR-GO"	9	0	1	0
"glutamate metabolism"	"TAIR-GO"	9	0	1	0
"nitrogen compound metabolism"	"TAIR-GO"	9	0.00000121942763306271	1	0.00915838047441219
"sucrose biosynthesis"	"TAIR-GO"	9	0	1	0
"glutamate degradation I"	"AraCyc"	9	0.000570436928804019	1	0.0511951232994476
"Taurine and hypotaurine metabolism"	"KEGG"	9	0.00000166470371273068	1	0.01279529972953
"photosystem I antenna complex"	"TAIR-GO"	8	0	1	0
"response to reactive oxygen species"	"TAIR-GO"	8	0	1	0
"glucose and glucose-1-phosphate degradation"	"AraCyc"	8	0.00761209426583778	1	0.122408512914367
"starch biosynthesis"	"AraCyc"	8	0	1	0
"nucleotide metabolism"	"FunCat"	8	0	2	0
"Streptomycin biosynthesis"	"KEGG"	8	0.0163616545229735	1	0.0821606690226213
"galactose degradation I"	"AraCyc"	7	0.000205333763220984	2	0.00312415318993813