"Pathway" "Pathway.source" "V3" "V4" "V5" "V6" "IN TWO DATA SETS" "" "sum.of.scores" "sum.of.genes" "" "" "Methane metabolism" "KEGG" "38" "17" "" "" "Phenylalanine metabolism" "KEGG" "38" "17" "" "" "Prostaglandin and leukotriene metabolism" "KEGG" "38" "17" "" "" "Stilbene, coumarine and lignin biosynthesis" "KEGG" "38" "17" "" "" "ORGAN DATA SET" "quantDE" "2.116222" "maxDE" "5.6475834" "ORGAN DATA SET" "Cell Wall Carbohydrate Metabolism" "BioPath" "63" "1.26411498779513e-11" "13" "0.0106406181026248" "Fructose and mannose metabolism" "KEGG" "34" "8.16236402934925e-23" "4" "0.00299007036080077" "cellulose biosynthesis" "BioPath" "30" "1.09454923836952e-17" "5" "0.000353960100065278" "Phenylpropanoid Metabolism" "BioPath" "30" "0.00116908432237290" "8" "0.0110654812276145" "Glycan Biosynthesis and Metabolism" "KEGG" "28" "4.99571618410715e-15" "4" "0.0114824220370107" "hemicellulose biosynthesis" "BioPath" "26" "2.28483424848445e-23" "4" "1.52751654697271e-05" "Methane metabolism" "KEGG" "26" "3.73617459374408e-17" "13" "1.05465934610563e-09" "Phenylalanine metabolism" "KEGG" "26" "1.05212324611215e-13" "13" "2.8180671244469e-09" "Prostaglandin and leukotriene metabolism" "KEGG" "26" "2.35547862239279e-22" "13" "4.66008243632399e-11" "Stilbene, coumarine and lignin biosynthesis" "KEGG" "26" "5.62814249701387e-12" "13" "1.60593851201111e-08" "Biosynthesis of steroids" "KEGG" "25" "5.1361703056794e-11" "4" "0.00299007036080077" "Glycerolipid metabolism" "KEGG" "24" "2.86273619304611e-15" "3" "0.00534558590109204" "pectin metabolism" "BioPath" "23" "7.12458042414416e-07" "7" "0.0143490759650351" "Glucosyltransferases for benzoic acids" "BioPath" "20" "1.15729357583197e-14" "2" "0.00243055273760344" "Lipid signaling" "AcylLipid" "20" "6.57248457855954e-10" "6" "0.00120900594597143" "Terpenoid biosynthesis" "KEGG" "18" "9.20925175170718e-13" "3" "0.00114698699226430" "triterpene, sterol, and brassinosteroid metabolism" "LitPath" "17" "0.000311505479202214" "5" "0.0154366745274248" "flavonol biosynthesis" "AraCyc" "16" "2.77182759905262e-19" "4" "1.56939878995195e-06" "mono-/sesqui-/di-terpene biosynthesis" "LitPath" "16" "1.91719946187417e-08" "4" "0.00216382838606997" "terpenoid metabolism" "LitPath" "16" "2.08836275180294e-08" "4" "0.00250978581647128" "secondary metabolism" "FunCat" "15" "1.14274702721348e-10" "3" "0.00461895706375969" "Biosynthesis of prenyl diphosphates" "BioPath" "14" "0.000655841707898953" "2" "0.0698958685291631" "Isoprenoid Biosynthesis in the Cytosol and in Mitochondria" "BioPath" "14" "0.0187076069639640" "2" "0.157618239819068" "prenyl diphosphate (GPP,FPP, GGPP) biosynthesis" "LitPath" "14" "3.92489532990896e-09" "2" "0.0104507705360012" "colanic acid building blocks biosynthesis" "AraCyc" "12" "5.03335584013779e-07" "2" "0.0217013714352859" "dTDP-rhamnose biosynthesis" "AraCyc" "12" "1.23692398301476e-08" "2" "0.0106413467138749" "galactose degradation I" "AraCyc" "12" "1.32613440235643e-19" "2" "3.95269473397402e-05" "glucose conversion" "AraCyc" "12" "4.42013328779602e-09" "2" "0.0087119011652655" "lactose degradation IV" "AraCyc" "12" "1.32613440235643e-19" "2" "3.95269473397402e-05" "trans-zeatin biosynthesis" "AraCyc" "12" "8.04060673950458e-17" "2" "6.2768187361552e-05" "UDP-glucose conversion" "AraCyc" "12" "3.23067956446564e-09" "2" "0.00811883244591509" "Phosphatidylinositol signaling system" "KEGG" "11" "1.97140332492028e-05" "2" "0.0369540650635572" "Signal Transduction" "KEGG" "11" "2.91013480776875e-05" "2" "0.0397981106267864" "Flavonoid and anthocyanin metabolism" "BioPath" "10" "0.000883435281429854" "6" "0.000148322547033034" "GDP-carbohydrate biosynthesis" "BioPath" "10" "9.92029004427052e-09" "1" "0.0189017142256164" "Methionin/SAM/ethylene metabolism from cysteine and aspartate" "BioPath" "10" "0.000630569309705784" "2" "0.0265263342320622" "detoxification" "FunCat" "10" "0" "5" "0" "gibberellic acid biosynthesis" "TAIR-GO" "9" "1.18323434180542e-13" "1" "0.000785138855097489" "gibberellin biosynthesis" "AraCyc" "9" "9.04600323369188e-09" "1" "0.00698260387860911" "storage protein" "FunCat" "8" "1.27951096901716e-14" "2" "1.39489969718862e-05" "Pentose and glucuronate interconversions" "KEGG" "8" "5.11488771560302e-06" "1" "0.0411495361671469" "calcium-mediated signaling" "TAIR-GO" "7" "7.3006636893311e-17" "1" "4.35314577832234e-05" "pentacyclic triterpenoid biosynthesis" "TAIR-GO" "7" "7.67411343378153e-12" "1" "0.000402165178405167" "cell growth / morphogenesis " "FunCat" "7" "3.05215066706303e-11" "1" "0.00126999847909727" "cytoskeleton" "FunCat" "7" "0" "1" "0" "directional cell growth (morphogenesis)" "FunCat" "7" "1.81033429993261e-15" "1" "0.00038660149439778" "intracellular signalling" "FunCat" "7" "0.000195705998520388" "1" "0.131832110664757" "triterpene biosynthesis" "LitPath" "7" "3.85272371487168e-05" "1" "0.0385479292183677" "STRESS DATA SET" "quantDE" "1.598304" "maxDE" "6.127361" "STRESS DATA SET" "HORMONE DATA SET" "quantDE" "2.971041" "maxDE" "6.1071011" "HORMONE DATA SET" "Methane metabolism" "KEGG" "12" "3.68190356431807e-15" "4" "1.2572085752944e-05" "Phenylalanine metabolism" "KEGG" "12" "2.18870881894971e-13" "4" "1.78726702329484e-05" "Prostaglandin and leukotriene metabolism" "KEGG" "12" "1.05262693135630e-17" "4" "4.21062425840805e-06" "Stilbene, coumarine and lignin biosynthesis" "KEGG" "12" "1.83463613067358e-12" "4" "3.36168890454515e-05" "MUTANT DATA SET" "quantDE" "1.964461" "maxDE" "6.012176738" "MUTANT DATA SET"