"Pathway" "Pathway.source" "V3" "V4" "V5" "V6" "IN TWO DATA SETS" "" "sum.of.scores" "sum.of.genes" "" "" "mono-/sesqui-/di-terpene biosynthesis" "LitPath" "72" "9" "" "" "terpenoid metabolism" "LitPath" "72" "9" "" "" "jasmonic acid biosynthesis" "AraCyc" "50" "5" "" "" "jasmonic acid biosynthesis" "AraCyc" "50" "5" "" "" "monoterpene biosynthesis" "AraCyc" "50" "5" "" "" "monoterpene biosynthesis" "AraCyc" "50" "5" "" "" "Phenylpropanoid Metabolism" "BioPath" "36" "6" "" "" "core phenylpropanoid metabolism" "BioPath" "34" "5" "" "" "Phenylpropanoid pathway" "LitPath" "34" "5" "" "" "response to wounding" "TAIR-GO" "30" "3" "" "" "biogenesis of cell wall" "FunCat" "28" "9" "" "" "fatty acid metabolism" "TAIR-GO" "23" "3" "" "" "jasmonic acid mediated signaling pathway" "TAIR-GO" "20" "2" "" "" "jasmonic acid metabolism" "TAIR-GO" "20" "2" "" "" "monoterpenoid biosynthesis" "TAIR-GO" "20" "2" "" "" "N-terminal protein myristoylation" "TAIR-GO" "19" "2" "" "" "ORGAN DATA SET" "quantDE" "3.00338" "maxDE" "4.422857" "ORGAN DATA SET" "STRESS DATA SET" "quantDE" "2.691538" "maxDE" "9.975492" "STRESS DATA SET" "amino acid metabolism" "FunCat" "24" "2.36839501468115e-09" "3" "0.0110024442914723" "Gluconeogenesis from lipids in seeds" "BioPath" "20" "8.26942009943401e-14" "2" "0.00998673023284218" "response to wounding" "TAIR-GO" "20" "1.03367990781745e-15" "2" "0.000894867776207958" "jasmonic acid biosynthesis" "AraCyc" "20" "8.72132672148923e-18" "2" "0.000588140414174971" "Lipid signaling" "AcylLipid" "20" "1.60029214026332e-05" "2" "0.167674621698783" "Nicotinate and nicotinamide metabolism" "KEGG" "18" "4.70738395411502e-09" "2" "0.0418746432607883" "mono-/sesqui-/di-terpene biosynthesis" "LitPath" "18" "7.07616775846447e-12" "3" "0.000942104440078886" "terpenoid metabolism" "LitPath" "18" "7.83450397125233e-12" "3" "0.00106754414068110" "Phenylpropanoid Metabolism" "BioPath" "14" "0.00203979351842116" "3" "0.0255188151451503" "biosynthesis of derivatives of homoisopentenyl pyrophosphate " "FunCat" "14" "4.506918757736e-14" "2" "0.000246442238796784" "Carbon fixation" "KEGG" "14" "2.54463763509051e-05" "2" "0.0230478120032976" "core phenylpropanoid metabolism" "BioPath" "12" "5.52829346342524e-08" "2" "0.00311851886147135" "biogenesis of cell wall" "FunCat" "12" "1.93668266876699e-06" "2" "0.0170107769342125" "Phenylalanine metabolism" "KEGG" "12" "5.03394192237093e-05" "2" "0.0485331376327848" "Phenylpropanoid pathway" "LitPath" "12" "0.00666514324566404" "2" "0.125859767349877" "fatty acid beta oxidation complex" "BioPath" "10" "4.26409460258793e-10" "1" "0.00927670253518832" "Methionin/SAM/ethylene metabolism from cysteine and aspartate" "BioPath" "10" "6.04895111438557e-08" "1" "0.0169174462105448" "cell death" "TAIR-GO" "10" "6.2077012708071e-13" "1" "0.000471537884850618" "fatty acid alpha-oxidation" "TAIR-GO" "10" "0" "1" "0" "fatty acid metabolism" "TAIR-GO" "10" "9.69302342415796e-06" "1" "0.0210344316250160" "hypersensitive response" "TAIR-GO" "10" "1.43934249543976e-11" "1" "0.00116606484504875" "jasmonic acid biosynthesis" "TAIR-GO" "10" "5.03009950417077e-07" "1" "0.0123859633040318" "jasmonic acid mediated signaling pathway" "TAIR-GO" "10" "0" "1" "0" "jasmonic acid metabolism" "TAIR-GO" "10" "0" "1" "0" "leaf senescence" "TAIR-GO" "10" "0" "1" "0" "long-chain fatty acid metabolism" "TAIR-GO" "10" "5.18512726008252e-08" "1" "0.00995833975728001" "monoterpenoid biosynthesis" "TAIR-GO" "10" "4.5456118756616e-13" "1" "0.000471537884850618" "nitrogen compound metabolism" "TAIR-GO" "10" "1.38968977412347e-15" "1" "0.000237058006678803" "response to bacteria" "TAIR-GO" "10" "0" "1" "0" "asparagine biosynthesis I" "AraCyc" "10" "7.73774309828516e-11" "1" "0.00179734778886573" "asparagine degradation I" "AraCyc" "10" "2.16597784736611e-08" "1" "0.00856541948703024" "aspartate biosynthesis and degradation" "AraCyc" "10" "6.55698266056505e-12" "1" "0.00129156899558356" "aspartate degradation I" "AraCyc" "10" "1.02760426702295e-05" "1" "0.0248273707690105" "aspartate degradation II" "AraCyc" "10" "7.51063558734122e-08" "1" "0.00973062635708213" "glutamine degradation III" "AraCyc" "10" "1.18680620955193e-10" "1" "0.00378262984147997" "lipoxygenase pathway" "AraCyc" "10" "7.77886179106242e-09" "1" "0.00548165721302786" "methionine and S-adenosylmethionine synthesis" "AraCyc" "10" "1.45363180263684e-12" "1" "0.00129156899558356" "methionine degradation I" "AraCyc" "10" "4.64848853676732e-10" "1" "0.00378262984147997" "mixed acid fermentation" "AraCyc" "10" "1.15426624343481e-05" "1" "0.0430902322373026" "monoterpene biosynthesis" "AraCyc" "10" "4.6394230493845e-14" "1" "0.000263025106598705" "sorbitol fermentation" "AraCyc" "10" "0.00137568886130876" "1" "0.129553939506427" "biogenesis of chloroplast" "FunCat" "10" "0.000966155136450496" "1" "0.0968405002294768" "lipid, fatty acid and isoprenoid degradation" "FunCat" "10" "3.26278840002853e-08" "1" "0.022214302803199" "metabolism of the aspartate family" "FunCat" "10" "7.78523335345155e-14" "1" "0.00196096974034388" "nitrogen and sulfur biogenesis of chloroplast" "FunCat" "10" "0" "1" "0" "Alanine and aspartate metabolism" "KEGG" "10" "9.48571565582406e-06" "1" "0.034384173139277" "Alkaloid biosynthesis I" "KEGG" "10" "9.0345141572238e-07" "1" "0.0180177003779725" "Arginine and proline metabolism" "KEGG" "10" "6.50835414272625e-05" "1" "0.0596691666756508" "Cysteine metabolism" "KEGG" "10" "6.45915253817614e-06" "1" "0.0265766407992674" "Fatty acid metabolism" "KEGG" "10" "0.000164204617869812" "1" "0.040753939802106" "Glutamate metabolism" "KEGG" "10" "0.0006032397218985" "1" "0.0622134605331626" "Methionine metabolism" "KEGG" "10" "4.27053889238007e-07" "1" "0.0149971801191455" "Novobiocin biosynthesis" "KEGG" "10" "2.12737579789370e-09" "1" "0.00641932101939827" "Phenylalanine, tyrosine and tryptophan biosynthesis" "KEGG" "10" "0.000446460482992464" "1" "0.0622134605331626" "Selenoamino acid metabolism" "KEGG" "10" "3.56296635798208e-05" "1" "0.0323567101571062" "Tyrosine metabolism" "KEGG" "10" "7.06484165770573e-05" "1" "0.0546948862813696" "Degradation of storage lipids and straight fatty acids" "AcylLipid" "10" "0.000120418343478248" "1" "0.069776644010251" "monoterpene biosynthesis" "LitPath" "10" "9.39094100904275e-11" "1" "0.00232645655268038" "auxin metabolism" "TAIR-GO" "9" "2.42637074801886e-12" "1" "0.000781624257685628" "N-terminal protein myristoylation" "TAIR-GO" "9" "4.8947718093444e-08" "1" "0.00416075578143723" "IAA biosynthesis" "AraCyc" "9" "4.05265864786274e-07" "1" "0.00548165721302786" "Benzoate degradation via CoA ligation" "KEGG" "9" "0.0096086776182114" "1" "0.206801619475474" "Biodegradation of Xenobiotics" "KEGG" "9" "1.33830948013341e-17" "1" "8.7911762989887e-05" "Inositol phosphate metabolism" "KEGG" "9" "0.0179569868272437" "1" "0.234973710734200" "Pantothenate and CoA biosynthesis" "KEGG" "9" "3.59501898905998e-07" "1" "0.0149971801191455" "HORMONE DATA SET" "quantDE" "0" "maxDE" "2.273875" "HORMONE DATA SET" "Cell Wall Carbohydrate Metabolism" "BioPath" "97" "6.85944222781988e-39" "25" "3.02718477817227e-10" "pectin metabolism" "BioPath" "75" "2.20865190937311e-60" "21" "2.82256273620848e-14" "mono-/sesqui-/di-terpene biosynthesis" "LitPath" "54" "1.75386961479565e-36" "6" "2.17044492354332e-05" "terpenoid metabolism" "LitPath" "54" "2.46580193225891e-36" "6" "2.72259989481110e-05" "Miscellaneous acyl lipid metabolism" "AcylLipid" "46" "4.06210008650911e-12" "17" "1.89234727466916e-06" "Starch and sucrose metabolism" "KEGG" "42" "1.13251637227166e-37" "6" "6.96862333692277e-06" "core phenylpropanoid metabolism" "BioPath" "22" "8.07996315130418e-11" "3" "0.0139754552708269" "Phenylpropanoid Metabolism" "BioPath" "22" "0.0257507197921509" "3" "0.497360007144125" "Phenylpropanoid pathway" "LitPath" "22" "0.0434393026603578" "3" "0.246747122861346" "sexual reproduction" "TAIR-GO" "20" "0" "5" "0" "monoterpene biosynthesis" "LitPath" "20" "2.08476845162653e-17" "2" "0.000284106234285798" "Fatty acid elongation and wax and cutin metabolism" "AcylLipid" "19" "0.000744584347410269" "5" "0.0556699699870535" "sucrose metabolism" "BioPath" "16" "7.78781595263344e-12" "2" "0.00680086756614178" "biogenesis of cell wall" "FunCat" "16" "2.69446354398137e-10" "7" "4.00420576253459e-06" "Galactose metabolism" "KEGG" "16" "2.19511663270792e-14" "2" "0.00344250427310447" "C-compound and carbohydrate utilization " "FunCat" "14" "0" "2" "0" "fatty acid metabolism" "TAIR-GO" "13" "1.64358671696345e-09" "2" "0.00239690490287083" "Oxidative phosphorylation" "KEGG" "12" "1.16274686657903e-07" "3" "0.00570067525662453" "jasmonic acid biosynthesis" "TAIR-GO" "10" "5.3287228205379e-08" "1" "0.0182744855433110" "jasmonic acid mediated signaling pathway" "TAIR-GO" "10" "0" "1" "0" "jasmonic acid metabolism" "TAIR-GO" "10" "0" "1" "0" "monoterpenoid biosynthesis" "TAIR-GO" "10" "3.92540349152747e-14" "1" "0.000709985386030034" "N-terminal protein myristoylation" "TAIR-GO" "10" "3.48358386507378e-10" "1" "0.00620540432521812" "pentacyclic triterpenoid biosynthesis" "TAIR-GO" "10" "1.70965458061483e-11" "1" "0.00322421676476631" "response to wounding" "TAIR-GO" "10" "7.30955661970044e-07" "1" "0.0241908783187665" "jasmonic acid biosynthesis" "AraCyc" "10" "8.58269134276013e-14" "1" "0.00145395366040924" "monoterpene biosynthesis" "AraCyc" "10" "2.61522746565196e-21" "1" "2.93060491849326e-05" "plant monoterpene biosynthesis" "AraCyc" "10" "5.84467338578625e-24" "1" "9.78666574320692e-06" "C-compound, carbohydrate catabolism" "FunCat" "10" "6.89170545074076e-08" "3" "0.00330525606666121" "Biosynthesis of steroids" "KEGG" "10" "4.97361703067241e-05" "1" "0.0768163213954323" "sequiterpene biosynthesis" "LitPath" "10" "3.84592184602517e-11" "1" "0.00100355806951920" "triterpene biosynthesis" "LitPath" "10" "7.48676802520734e-05" "1" "0.0385479292183677" "cellulose biosynthesis" "AraCyc" "8" "1.63488870408470e-08" "2" "0.000330684583772958" "lactose degradation IV" "AraCyc" "8" "7.96994693006886e-17" "2" "9.37011552304286e-07" "transport " "FunCat" "8" "9.624061985759e-15" "3" "0" "Pentose and glucuronate interconversions" "KEGG" "8" "7.74434411132957e-09" "2" "0.000389311399701337" "MUTANT DATA SET" "quantDE" "0.6047115" "maxDE" "6.070744274" "MUTANT DATA SET"