"Pathway"	"Pathway.source"	"V3"	"V4"	"V5"	"V6"
"IN ALL DATA SETS"	""	"sum.of.scores"	"sum.of.genes"	""	""
"lignin biosynthesis"	"TAIR-GO"	"120"	"12"	""	""
"lignin biosynthesis"	"AraCyc"	"120"	"12"	""	""
"phenylpropanoid biosynthesis"	"TAIR-GO"	"80"	"8"	""	""
"Phenylpropanoid Metabolism"	"BioPath"	"72"	"8"	""	""
"core phenylpropanoid metabolism"	"BioPath"	"70"	"7"	""	""
"Phenylpropanoid pathway"	"LitPath"	"70"	"7"	""	""
"Stilbene, coumarine and lignin biosynthesis"	"KEGG"	"62"	"7"	""	""
"Ascorbate and aldarate metabolism"	"KEGG"	"50"	"5"	""	""
"Fluorene degradation"	"KEGG"	"50"	"5"	""	""
"gamma-Hexachlorocyclohexane degradation"	"KEGG"	"50"	"5"	""	""
"biogenesis of cell wall"	"FunCat"	"42"	"5"	""	""
"biosynthesis of phenylpropanoids"	"FunCat"	"40"	"4"	""	""
"biosynthesis of secondary products derived from L-phenylalanine and L-tyrosine"	"FunCat"	"40"	"4"	""	""
"ORGAN DATA SET"	"quantDE"	"2.837102"	"maxDE"	"4.5044101"	"ORGAN DATA SET"
"core phenylpropanoid metabolism"	"BioPath"	"10"	"9.38239166359216e-15"	"1"	"0.000281631963350294"
"Phenylpropanoid Metabolism"	"BioPath"	"10"	"5.51269011412817e-09"	"1"	"0.00418351480103982"
"lignin biosynthesis"	"TAIR-GO"	"10"	"3.94509968020638e-20"	"1"	"1.86944715773928e-05"
"phenylpropanoid biosynthesis"	"TAIR-GO"	"10"	"6.15354928294919e-23"	"1"	"5.19290877149799e-06"
"lignin biosynthesis"	"AraCyc"	"10"	"1.87405223720054e-20"	"1"	"0.000118694689654792"
"biogenesis of cell wall"	"FunCat"	"10"	"3.10818551703290e-12"	"1"	"0.00242671279970543"
"biosynthesis of phenylpropanoids"	"FunCat"	"10"	"1.75543043999131e-14"	"1"	"0.000684099828614893"
"biosynthesis of secondary products derived from L-phenylalanine and L-tyrosine"	"FunCat"	"10"	"1.75543043999131e-14"	"1"	"0.000684099828614893"
"Ascorbate and aldarate metabolism"	"KEGG"	"10"	"2.84868678751805e-14"	"1"	"0.000235730706840087"
"Fluorene degradation"	"KEGG"	"10"	"1.17856483530723e-16"	"1"	"8.2789750449714e-05"
"gamma-Hexachlorocyclohexane degradation"	"KEGG"	"10"	"6.18976963224809e-16"	"1"	"0.000107158811432231"
"Stilbene, coumarine and lignin biosynthesis"	"KEGG"	"10"	"8.01143630943831e-11"	"1"	"0.00371545947129825"
"Phenylpropanoid pathway"	"LitPath"	"10"	"0"	"1"	"0"
"STRESS DATA SET"	"quantDE"	"2.25989"	"maxDE"	"5.774662"	"STRESS DATA SET"
"Intermediary Carbon Metabolism"	"BioPath"	"50"	"3.73487001596015e-28"	"8"	"1.1336386214088e-06"
"core phenylpropanoid metabolism"	"BioPath"	"40"	"6.8888729367104e-37"	"4"	"1.86402857871051e-05"
"Phenylpropanoid Metabolism"	"BioPath"	"40"	"3.42623251609011e-16"	"4"	"0.0094001329664592"
"lignin biosynthesis"	"AraCyc"	"40"	"2.52869810547484e-25"	"4"	"0.000352261204036573"
"Phenylpropanoid pathway"	"LitPath"	"40"	"0"	"4"	"0"
"C-compound and carbohydrate metabolism"	"FunCat"	"35"	"1.05597391609936e-08"	"6"	"0.00359100611405176"
"tricarboxylic-acid pathway (citrate cycle, Krebs cycle, TCA cycle)"	"FunCat"	"34"	"2.80649230260527e-19"	"5"	"0.000107305444951292"
"Stilbene, coumarine and lignin biosynthesis"	"KEGG"	"32"	"8.09338188442913e-19"	"4"	"0.00170245451877606"
"lignin biosynthesis"	"TAIR-GO"	"30"	"1.50484200622401e-40"	"3"	"2.72634246950915e-07"
"phenylpropanoid biosynthesis"	"TAIR-GO"	"30"	"2.62657147422911e-50"	"3"	"1.10155362973532e-08"
"suberin biosynthesis"	"AraCyc"	"30"	"2.35530793249108e-24"	"3"	"9.84299705769385e-05"
"TCA cycle -- aerobic respiration"	"AraCyc"	"28"	"1.93449726575705e-15"	"4"	"0.000481585360786449"
"TCA cycle variation VII"	"AraCyc"	"28"	"1.61197252528856e-10"	"4"	"0.00296046058861236"
"TCA cycle variation VIII"	"AraCyc"	"28"	"1.91756589350768e-14"	"4"	"0.000585798707922662"
"Citrate cycle (TCA cycle)"	"KEGG"	"28"	"2.36023400278995e-20"	"4"	"2.59458609363887e-05"
"acetyl-CoA assimilation"	"AraCyc"	"24"	"2.1818581229778e-14"	"3"	"0.000996764747527296"
"glyoxylate cycle"	"AraCyc"	"24"	"1.39414936660952e-16"	"3"	"0.000270074282585677"
"serine-isocitrate lyase pathway"	"AraCyc"	"24"	"1.37025135667223e-11"	"3"	"0.00359878899680703"
"Glyoxylate and dicarboxylate metabolism"	"KEGG"	"24"	"1.28850284055315e-19"	"3"	"9.62344870539106e-05"
"Reductive carboxylate cycle (CO2 fixation)"	"KEGG"	"24"	"3.10954760392966e-23"	"3"	"2.39663448201133e-05"
"phenylpropanoid biosynthesis"	"AraCyc"	"20"	"7.45158051510633e-29"	"2"	"5.35301102080114e-05"
"Ascorbate and aldarate metabolism"	"KEGG"	"20"	"9.3991881357786e-15"	"2"	"0.00133743731349244"
"Fluorene degradation"	"KEGG"	"20"	"2.9960665570396e-19"	"2"	"0.000281409314265436"
"gamma-Hexachlorocyclohexane degradation"	"KEGG"	"20"	"7.26583340740813e-18"	"2"	"0.000415408036222058"
"leucine biosynthesis"	"AraCyc"	"18"	"3.831098752872e-17"	"3"	"5.98040087820556e-05"
"oxidative branch of the pentose phosphate pathway"	"AraCyc"	"16"	"3.28771886585896e-16"	"3"	"2.42579071301676e-05"
"pentose-phosphate pathway "	"FunCat"	"16"	"3.37552401868828e-15"	"3"	"1.76130802073240e-05"
"Pentose phosphate pathway"	"KEGG"	"16"	"1.84056553433724e-09"	"3"	"0.000438062921950055"
"TCA cycle variation IV"	"AraCyc"	"14"	"4.37113916707806e-05"	"2"	"0.0256277371239222"
"C-compound and carbohydrate glyoxylate cycle "	"FunCat"	"14"	"1.16142620684451e-26"	"2"	"4.56567483653684e-07"
"glyoxylate cycle"	"FunCat"	"14"	"1.16142620684451e-26"	"2"	"4.56567483653684e-07"
"Glutathione metabolism"	"KEGG"	"14"	"9.52418633050512e-07"	"2"	"0.00601314097048866"
"biogenesis of cell wall"	"FunCat"	"12"	"5.83787051021566e-06"	"2"	"0.0137707219884108"
"C-compound and carbohydrate utilization "	"FunCat"	"12"	"1.22279621613788e-25"	"2"	"0"
"Phenylalanine metabolism"	"KEGG"	"12"	"0.000174523674454746"	"2"	"0.0421946276922582"
"fatty acid biosynthesis"	"TAIR-GO"	"10"	"6.33014617184198e-08"	"1"	"0.00540516389326513"
"glucose metabolism"	"TAIR-GO"	"10"	"3.30551549669151e-13"	"1"	"0.000538059275367787"
"pentose-phosphate shunt"	"TAIR-GO"	"10"	"4.37083801467933e-10"	"1"	"0.0034428886637351"
"pentose-phosphate shunt, oxidative branch"	"TAIR-GO"	"10"	"3.30551549669151e-13"	"1"	"0.000538059275367787"
"response to light"	"TAIR-GO"	"10"	"3.33196118732045e-06"	"1"	"0.0311143870678828"
"response to wounding"	"TAIR-GO"	"10"	"2.16203886643597e-06"	"1"	"0.0115293690800006"
"tricarboxylic acid cycle"	"TAIR-GO"	"10"	"4.24367469723773e-19"	"1"	"5.45255421007289e-05"
"fatty acid oxidation pathway"	"AraCyc"	"10"	"0.000114393726038261"	"1"	"0.0293066514702813"
"octane oxidation"	"AraCyc"	"10"	"4.75758504526037e-06"	"1"	"0.0083719808711951"
"phenylpropanoid pathway, initial reactions"	"AraCyc"	"10"	"4.22631910653734e-09"	"1"	"0.00194786762034089"
"biosynthesis of phenylpropanoids"	"FunCat"	"10"	"1.74010179667913e-06"	"1"	"0.0296397590152479"
"biosynthesis of secondary products derived from L-phenylalanine and L-tyrosine"	"FunCat"	"10"	"1.74010179667913e-06"	"1"	"0.0296397590152479"
"Fatty acid metabolism"	"KEGG"	"10"	"0.000472855923401497"	"1"	"0.0368048088226588"
"Flavonoid biosynthesis"	"KEGG"	"10"	"3.58857862120833e-08"	"1"	"0.00870790580915194"
"Miscellaneous acyl lipid metabolism"	"AcylLipid"	"10"	"0.000785436472446496"	"1"	"0.293902611365355"
"auxin biosynthesis"	"TAIR-GO"	"9"	"2.64671546238728e-13"	"1"	"0.000324268175085587"
"IAA biosynthesis"	"AraCyc"	"9"	"2.06567568305036e-05"	"1"	"0.0120561898591272"
"Prolin/Hydroxyproline from glutamate"	"BioPath"	"8"	"2.83614389040542e-09"	"2"	"4.95934557010458e-05"
"dTDP-rhamnose biosynthesis"	"AraCyc"	"8"	"0.00915681731352082"	"2"	"0.0227378633897283"
"galactose degradation I"	"AraCyc"	"8"	"2.83659322495957e-09"	"2"	"9.27282151957122e-05"
"glucose conversion"	"AraCyc"	"8"	"0.00535618146683001"	"2"	"0.0187578218607353"
"lactose degradation IV"	"AraCyc"	"8"	"2.83659322495957e-09"	"2"	"9.27282151957122e-05"
"UDP-glucose conversion"	"AraCyc"	"8"	"0.00453613962233888"	"2"	"0.0175255325079313"
"HORMONE DATA SET"	"quantDE"	"2.517786"	"maxDE"	"3.7177757"	"HORMONE DATA SET"
"core phenylpropanoid metabolism"	"BioPath"	"10"	"9.38239166359216e-15"	"1"	"0.000281631963350294"
"Phenylpropanoid Metabolism"	"BioPath"	"10"	"5.51269011412817e-09"	"1"	"0.00418351480103982"
"lignin biosynthesis"	"TAIR-GO"	"10"	"3.94509968020638e-20"	"1"	"1.86944715773928e-05"
"phenylpropanoid biosynthesis"	"TAIR-GO"	"10"	"6.15354928294919e-23"	"1"	"5.19290877149799e-06"
"lignin biosynthesis"	"AraCyc"	"10"	"0"	"1"	"0"
"biogenesis of cell wall"	"FunCat"	"10"	"2.03742302814552e-12"	"1"	"0.00122965454400992"
"biosynthesis of phenylpropanoids"	"FunCat"	"10"	"1.14353221775842e-14"	"1"	"0.000344407909649726"
"biosynthesis of secondary products derived from L-phenylalanine and L-tyrosine"	"FunCat"	"10"	"1.14353221775842e-14"	"1"	"0.000344407909649726"
"Ascorbate and aldarate metabolism"	"KEGG"	"10"	"2.84868678751805e-14"	"1"	"0.000235730706840087"
"Fluorene degradation"	"KEGG"	"10"	"1.17856483530723e-16"	"1"	"8.2789750449714e-05"
"gamma-Hexachlorocyclohexane degradation"	"KEGG"	"10"	"6.18976963224809e-16"	"1"	"0.000107158811432231"
"Stilbene, coumarine and lignin biosynthesis"	"KEGG"	"10"	"8.01143630943831e-11"	"1"	"0.00371545947129825"
"Phenylpropanoid pathway"	"LitPath"	"10"	"0"	"1"	"0"
"MUTANT DATA SET"	"quantDE"	"2.688227"	"maxDE"	"4.456733301"	"MUTANT DATA SET"
"Phenylpropanoid Metabolism"	"BioPath"	"12"	"1.78200016204009e-06"	"2"	"0.00463546860564666"
"Biosynthesis of Amino Acids and Derivatives"	"BioPath"	"10"	"9.46958574943392e-05"	"1"	"0.0494405264400154"
"core phenylpropanoid metabolism"	"BioPath"	"10"	"2.89876784283625e-10"	"1"	"0.00404491802603490"
"Glutathione metabolism"	"BioPath"	"10"	"1.47080469541192e-08"	"1"	"0.0093544701760204"
"development"	"TAIR-GO"	"10"	"9.7044543706423e-09"	"1"	"0.00468467050406272"
"flower development"	"TAIR-GO"	"10"	"1.3324022109513e-17"	"1"	"7.75762251993671e-05"
"glutathione biosynthesis"	"TAIR-GO"	"10"	"5.61220637908579e-22"	"1"	"7.789363157247e-06"
"lignin biosynthesis"	"TAIR-GO"	"10"	"6.60684999299622e-14"	"1"	"0.000277756976894884"
"phenylpropanoid biosynthesis"	"TAIR-GO"	"10"	"1.13308870705603e-16"	"1"	"7.75762251993671e-05"
"response to cadmium ion"	"TAIR-GO"	"10"	"0"	"1"	"0"
"glutathione biosynthesis"	"AraCyc"	"10"	"1.44181912928703e-28"	"1"	"7.52820441785147e-07"
"lignin biosynthesis"	"AraCyc"	"10"	"3.39332597615383e-15"	"1"	"0.000702213806348607"
"biogenesis of cell wall"	"FunCat"	"10"	"1.01382875082928e-09"	"1"	"0.00399099201130412"
"biosynthesis of nonprotein amino acids"	"FunCat"	"10"	"8.58800301819589e-23"	"1"	"1.23471766448462e-05"
"biosynthesis of phenylpropanoids"	"FunCat"	"10"	"6.44542873376698e-12"	"1"	"0.00113236508586113"
"biosynthesis of secondary products derived from L-phenylalanine and L-tyrosine"	"FunCat"	"10"	"6.44542873376698e-12"	"1"	"0.00113236508586113"
"biosynthesis of secondary products derived from primary amino acids"	"FunCat"	"10"	"6.66953268675745e-19"	"1"	"0.000135122046839782"
"Ascorbate and aldarate metabolism"	"KEGG"	"10"	"5.31387940385931e-12"	"1"	"0.00081535070061191"
"Fluorene degradation"	"KEGG"	"10"	"2.35298952485594e-14"	"1"	"0.000287832708898011"
"gamma-Hexachlorocyclohexane degradation"	"KEGG"	"10"	"1.21498140174426e-13"	"1"	"0.000372172668941069"
"Glutamate metabolism"	"KEGG"	"10"	"1.56265178640338e-09"	"1"	"0.00241653580526917"
"Glutathione metabolism"	"KEGG"	"10"	"2.71631741437256e-10"	"1"	"0.00230612109339643"
"Stilbene, coumarine and lignin biosynthesis"	"KEGG"	"10"	"1.23664802650607e-08"	"1"	"0.0123700897198785"
"Phenylpropanoid pathway"	"LitPath"	"10"	"0"	"1"	"0"