"Pathway" "Pathway.source" "V3" "V4" "V5" "V6" "IN THREE DATA SETS" "sum.of.scores" "sum.of.genes" "Fatty acid elongation and wax and cutin metabolism" "AcylLipid" 47 12 "ORGAN DATA SET" "quantDE" 5.093431 "maxDE" 7.9986388 "ORGAN DATA SET" "Miscellaneous acyl lipid metabolism" "AcylLipid" 54 0.000000000000479316333485954 16 0.000217768202936501 "Fatty acid elongation and wax and cutin metabolism" "AcylLipid" 30 0.0000000000000850431239441567 8 0.000698673488162815 "fatty acid metabolism" "TAIR-GO" 28 9.75790374643759E-036 4 0.00000109043609628063 "sexual reproduction" "TAIR-GO" 20 0 5 0 "cuticle biosynthesis" "TAIR-GO" 19 3.50601235846463E-022 3 0.0000201934208252857 "long-chain fatty acid metabolism" "TAIR-GO" 19 5.1098067712209E-018 3 0.0000920469673748962 "very-long-chain fatty acid metabolism" "TAIR-GO" 19 6.99514840723199E-020 3 0.0000539303829200997 "fatty acid biosynthesis -- initial steps" "AraCyc" 19 1.16131285561639E-020 4 0.00000295220412287358 "atty acid elongation -- unsaturated" "AraCyc" 17 4.35381339464038E-022 3 0.00000928593900944733 "fatty acid elongation -- saturated" "AraCyc" 17 2.06550989827123E-021 3 0.0000115469100411124 "fatty acid elongation" "TAIR-GO" 15 1.02793337384627E-019 2 0.000108296669198023 "fatty acid elongation -- unsaturated" "AraCyc" 15 5.08588627077542E-019 2 0.000289522941109627 "Biosynthesis of prenyl diphosphates" "BioPath" 14 0.00000000022925436351444 3 0.000755745698410789 "Cell Wall Carbohydrate Metabolism" "BioPath" 14 0.0155987983785199 4 0.222520186114969 "Isoprenoid Biosynthesis in the Cytosol and in Mitochondria" "BioPath" 14 0.0000000323776474469672 3 0.00292116417244316 "pectin metabolism" "BioPath" 14 0.0000000114331307802376 4 0.0131867506972296 "Gluconeogenesis from lipids in seeds" "BioPath" 12 0.000000180110787674118 2 0.0275036496644529 "cutin biosynthesis" "TAIR-GO" 10 0 1 0 "fatty acid biosynthesis" "TAIR-GO" 10 0.000000480475163958366 1 0.0209585656743748 "gibberellic acid catabolism" "TAIR-GO" 10 0.0000000000114880415843629 1 0.00219507189929603 "fatty acid oxidation pathway" "AraCyc" 10 0.000000000922921868402601 1 0.00862035525918938 "octane oxidation" "AraCyc" 10 0.0000000000231258177594572 1 0.00236579191198597 "Diterpenoid biosynthesis" "KEGG" 10 0.000000000000049756029725094 1 0.00102064128824896 "Fatty acid metabolism" "KEGG" 10 0.000000000119053170534126 1 0.00822998082229823 "Gibberellin metabolism" "LitPath" 10 0.00000546484189435515 1 0.0336218561732317 "giberelin catabolism" "LitPath" 10 9.06299489040978E-016 1 0.000286730877005487 "mono-/sesqui-/di-terpene biosynthesis" "LitPath" 10 0.0000760809522770153 1 0.100147450181322 "prenyl diphosphate (GPP,FPP, GGPP) biosynthesis" "LitPath" 10 0.0000018344012410966 1 0.0264756546718478 "sequiterpene biosynthesis" "LitPath" 10 9.06299489040978E-016 1 0.000286730877005487 "terpenoid metabolism" "LitPath" 10 0.0000800923984952727 1 0.105779166943209 "C-compound and carbohydrate utilization " "FunCat" 9 5.9294788147065E-022 3 0 "triacylglycerol degradation" "AraCyc" 8 0.0000000851698834242077 4 0.0000376788224545212 "STRESS DATA SET" "quantDE" 2.459386 "maxDE" 4.887182 "STRESS DATA SET" "HORMONE DATA SET" "quantDE" 0.03992211 "maxDE" 5.366939 "HORMONE DATA SET" "Cell Wall Carbohydrate Metabolism" "BioPath" 89 8.76762110458948E-044 22 0.000000000525857824690215 "pectin metabolism" "BioPath" 67 2.68584892359236E-059 18 0.000000000000636365457261746 "terpenoid metabolism" "LitPath" 50 3.99411182390525E-036 5 0.0000388913822352537 "mono-/sesqui-/di-terpene biosynthesis" "LitPath" 50 2.91570972684956E-036 5 0.0000320176367323907 "Miscellaneous acyl lipid metabolism" "AcylLipid" 48 0.0000000000000451951764854963 18 0.000000069979930300025 "Starch and sucrose metabolism" "KEGG" 42 1.28712614063924E-039 6 0.00000134776201567239 "monoterpene biosynthesis" "LitPath" 20 4.44460649730277E-019 2 0.00010472030477968 "sexual reproduction" "TAIR-GO" 20 0 5 0 "Galactose metabolism" "KEGG" 16 4.66296683735858E-015 2 0.0017677174412915 "sucrose metabolism" "BioPath" 16 0.0000000000000982815026958304 2 0.00389714425893934 "C-compound and carbohydrate utilization " "FunCat" 14 0 2 0 "biogenesis of cell wall" "FunCat" 14 0.0000000320408525596139 6 0.0000713976749494793 "Oxidative phosphorylation" "KEGG" 12 0.0000000392945928023992 3 0.00244137839509847 "transport " "FunCat" 12 1.29462709747915E-023 5 0 "Fatty acid elongation and wax and cutin metabolism" "AcylLipid" 11 0.00363368620210687 3 0.129725947734548 "Oxidative phosphorylation" "KEGG" 12 0.0000000392945928023992 3 0.00244137839509847 "jasmonic acid biosynthesis" "TAIR-GO" 10 0.0000000849700844708883 1 0.0233270935214856 "jasmonic acid mediated signaling pathway" "TAIR-GO" 10 0 1 0 "jasmonic acid metabolism" "TAIR-GO" 10 0 1 0 "monoterpenoid biosynthesis" "TAIR-GO" 10 0.000000000000065038842935567 1 0.000920167637628931 "N-terminal protein myristoylation" "TAIR-GO" 10 0.000000000566771438411096 1 0.00798523184963205 "pentacyclic triterpenoid biosynthesis" "TAIR-GO" 10 0.0000000000280365891121266 1 0.00416165680305497 "response to wounding" "TAIR-GO" 10 0.0000011473712423588 1 0.0307868641745187 "jasmonic acid biosynthesis" "AraCyc" 10 0.000000000000127796139319393 1 0.00194681503916972 "monoterpene biosynthesis" "AraCyc" 10 3.9293288748794E-021 1 0.0000394372467589891 "plant monoterpene biosynthesis" "AraCyc" 10 8.79001788951481E-024 1 0.0000131743577312401 "C-compound, carbohydrate catabolism" "FunCat" 10 0.000000108195018643578 3 0.00442746770581388 "transport facilitation" "FunCat" 10 0 4 0 "Biosynthesis of steroids" "KEGG" 10 0.000021358269920517 1 0.0511328785279001 "sequiterpene biosynthesis" "LitPath" 10 0.00000000000527088713646814 1 0.000521328867282703 "triterpene biosynthesis" "LitPath" 10 0.000013897007929168 1 0.0209993670006847 "cellulose biosynthesis" "AraCyc" 8 0.0000000222582222137099 2 0.000518038846805869 "lactose degradation IV" "AraCyc" 8 1.10441958589331E-016 2 0.00000148845584643947 "lipid transport " "FunCat" 8 0.00000000000386558431616308 4 0.0000000574209609552338 "transported compounds (substrates)" "FunCat" 8 0 4 0 "Pentose and glucuronate interconversions" "KEGG" 8 0.00000000346835698304772 2 0.000195068948427115 "MUTANT DATA SET" "quantDE" 2.037542 "maxDE" 5.9111307 "MUTANT DATA SET" "fatty acid metabolism" "TAIR-GO" 9 0 1 0 "Fatty acid elongation and wax and cutin metabolism" "AcylLipid" 9 0 1 0 "Cell Wall Carbohydrate Metabolism" "BioPath" 8 0.0000039753072581873 2 0.00718496460760803 "pectin metabolism" "BioPath" 8 0.0000000000811806196800232 2 0.000667209847225506 "Pentose and glucuronate interconversions" "KEGG" 8 3.52195791837743E-018 2 0.00000091972109358956