Co-Expression Analysis of: CYP89A9 (At3g03470) Institut de Biologie Moléculaire des Plantes











































































































































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Mutant Data Set save / view heatmap as: OpenOffice Table annotation details for co-expressed genes can be found to the right of the heatmap

























































































































































MS Excel Table

























































































































































save / view all data as: Tab delimited Table For further information on the experiments please go to the Genevestigator database using the experiment-ID given in brackets.






















































































































































shown are a maximum of 50 genes with r>0.5 (If more co-expressed genes with r>0.5 exist, they can be saved as Tab delimited data only) magnitude of change  [log2(mutant / wild type)]  0   0.3   0.6   0.9  1.2   1.5   1.8   2.1   2.4   2.7   >3















































































































































greater than zero                                                         



















































































































































less than zero                                                         



















































































































































Locus r-value Name Description 35S leafy, seedling (143) aba1, fresh seeds (96) abi1, fresh seeds (96) abi3, fresh seeds (96) acn1, seedlings (63) acn1, seedlings, with sucrose (63) add3, seedling (55) ag12, shoot apex (89) ag12, flower (89) akt1, roots (141) anr1, roots, dex treated, N03 depleted (64) anr1, roots, not dex treated, N03 depleted (64) anr1, roots, nitrate depleted (135) ap1, shoot apex (89) ap1, flower (89) ap2, shoot apex (89) ap2, flower (89) ap3, shoot apex (89) ap3, flower (89) ape2, mature leaf, high light (68) ape3, mature leaf, low light (68) ARR22o, seedling (115) ARR22o, seedling, zeatin (115) ar4, whole plant (104) bountifullo, juvenile leaf (48) camta1, suspension cell (138) camta1, seedling (138) cdb1, seedling (137) cdpk-yfp1, seedling (65) cdpk-yfp4, seedling (65) chs, juvenile leaf (67) cir1-PR1-LUC, whole rosette (31) cir1-ein2-PR-LUC, whole rosette (31) cls8, seedling (76) cls8, seedling, 4°C (76) clv3, shoot apex (89) clv3, flower (89) cngc1, roots (141) cngc4, roots (141) co, apical region, vegetative (94) co, apical region, reproductive, 3d (94) co, apical region, reproductive, 5d (94) co, apical region, reproductive, 7d (94) coi1, senescing leaf (60) cov, stem, base (66) cov, stem, tip (66) det2, seedling, mock, 30min (111) det2, seedling, BL, 30min (111) det2, seedling, mock, 1h (111) det2, seedling, BL, 1h (111) det2, seedling, mock, 3h (111) det2, seedling, BL, 3h (111) det2, seedling (131) ein2, senescing leaf (60) ein2-PR1-LUC, whole rosette (31) etr1, whole plant, water (99) etr1, whole plant, GA4, 60 min (99) fls2, seedling, control (81) fls2, seedling, flg22 (81) ft, apical region, vegetative (94) ft, apical region, reproductive, 3d (94) ft, apical region, reproductive, 5d (94) ft, apical region, reproductive, 7d (94) fus, fresh seeds (96) ga1, seedling, mock, 30min (111) ga1, seedling, GA3, 30min (111) ga1, seedling, mock, 1h (111) ga1, seedling, GA3, 1h (111) ga1, seedling, mock, 3h (111) ga1, seedling, GA3, 3h (111) ga1, seedling (131) gl1, rosette leaf, stage 10 (88) gl1, rosette leaf, stage 12 (88) gpa1, seedling, ABA, 3h (75) gpa1, seedling (75) gun1-gun5, whole plant, Norflurazone (98) hic, guard cell enriched (11) hic, mature leaf (11) hic, guard cell enriched, CO2 (11) hic, mature leaf, CO2 (11) iae1, hypocotyl (139) iae2, hypocotyl (139) icl2 (Col), seedling (28) icl2 (Ws), seedling (28) ir1, roots (142) ku80, whole plant (57) ku80, whole plant, bleomycin, 3d (57) leafy-GR, seedling, de (143) leafy-GR, seedling, de/cyc (143) leafy-GR, seedling, cyc (143) lfy, shoot apex (89) lfy, flower (89) lfy, apical region, vegetative (94) lfy, apical region, reproductive, 3d (94) lfy, apical region, reproductive, 5d (94) lfy, apical region, reproductive, 7d (94) ms1-ttg, flower bud, old (9) ms1-ttg, flower bud, young (9) myb61, seedling (15) myb61, seedling, sucrose (15) MYB61o, seedling (15) MYB61o, seedling, sucrose (15) nahG, senescing leaf (60) o1, seedling (46) o1, seedling, H202, 3h (46) pasta2M1, mature leaf (150) pho1, mature leaf (61) pho3, leaf (27) pmr4, mature leaf, Erysiphe cichoracearum (85) pmr4, mature leaf (85) RALF1o, seedling (152) rbohB, seedling (59) rbohB, seedling, 30°C, 1h (59) rbohB, seedling, 40°C, 1h (59) rbohC, root, elongation zone (79) rdo, fresh seeds (96) rhd2, lateral roots (29) sfr2, whole rosette, 4°C (58) sfr2, whole rosette (58) sfr2-1, whole rosette, 4°C, 24h (12) sfr2-1, whole rosette, 4°C, 24h (12) sfr3, whole rosette, 4°C (58) sfr3, whole rosette (58) sfr6, whole rosette, 4°C (58) sfr6, whole rosette (58) sfr6, whole rosette, drought (58) sfr6, seedling (76) sfr6, seedling, 4°C (76) sfr6, suspension cell, light (153) sfr6, suspension cell, dark (153) sph1, leaves, stage 5 (145) sph1, leaves, stage 14 (145) tcp13, flowers (100) tcp14, flowers (100) ttg, flower bud, old (9) ttg, flower bud, young (9) ufo1, shoot apex (89) ufo1, flower (89) gun1-gun5, seedling, far red then white light (83) gun1-gun5, seedling, dark then white light (83) zorro, seedlings, control, 2h (103) zorro, seedlings, control 24h, (103) zorro, seedlings, zearalenone, 2h (103) zorro, seedlings, zearalenone, 24h (103) Locus Probeset Name Description Annotation score GO.keywords FunCat keywords AraCyc annotations KEGG annotations BioPath annotations AcylLipid category Literature annotations Gene family 90% quantile of DE max. DE
At3g03470 1.000 CYP89A9 cytochrome P450 family protein -0.07 -0.04 -0.03 0.46 0.12 0.15 -1.83 1.37 0.56 0.23 0.18 -0.02 -0.08 0.66 0.79 0.29 -0.69 0.54 0.38 0.31 -0.16 0.54 2.25 -0.08 -1.2 0.25 0.53 0.12 0.38 1.68 -0.12 1.08 0.18 0.61 1.15 0.52 0.75 0.4 0.55 0.02 0.02 0.02 0.02 0.9 -0.92 -0.19 0.99 0.15 0.11 0.5 0.9 0.7 0.02 0.72 0.54 -0.43 -0.71 -0.69 -0.22 0.13 -0.09 0.24 0.51 -0.84 -1.13 -1.75 -1.51 -1.53 -1.12 -2.34 0.02 0.89 0.91 -0.67 0.02 -0.1 -0.66 -0.62 0.04 0.82 -0.14 0.93 0.86 0.4 0.62 0.12 -0.17 -0.96 -2.67 -2 1.24 -0.65 -0.54 -1.03 0.37 -0.19 -0.34 -0.66 0.11 -0.13 0.12 0.66 0.53 -0.55 0.37 0.02 -1.02 0.62 1.06 -0.51 0.46 -0.25 0.22 -0.17 -0.2 0.4 -0.34 0.07 1.18 -0.45 0.17 0.68 0.91 0.17 -0.53 -1.11 0.03 0.23 0.02 -0.45 1.99 -0.14 -0.06 -0.11 0.07 -0.11 0.37 0.42 -0.11 0.45 -1.64 -1.94 -1.85 -1.21 At3g03470 259058_at CYP89A9 cytochrome P450 family protein 1






cytochrome P450 family 2.69 4.91
At5g14780 0.590 FDH Encodes a NAD-dependent formate dehydrogenase. 0.5 -0.08 -0.16 -1.42 0.28 0.44 0.43 0.63 0.85 0.1 0.36 0.01 -0.11 -0.56 -0.64 0.32 -0.77 1 0.66 0.17 0.31 0.1 1.12 0.44 -0.5 0 -0.23 0.31 1.02 0.56 0.11 0.33 -1.38 0.38 0.65 0.21 0.55 0.89 1.86 0.11 0.11 0.11 0.11 -0.03 -0.25 0.21 0.38 0.38 0.66 0.92 0.55 0.8 0.48 -0.48 0.07 -0.78 -1.03 -0.19 0.26 0.78 0.78 0.91 0.74 -1.45 -1.15 -1.29 -1.61 -1.77 -1.05 -1.1 -1.41 0.36 0.45 0.24 0.54 0.21 -1.13 -1.02 -0.07 -1.1 -0.18 -0.12 1.23 1.09 0.4 0.55 -0.24 -0.38 -3.33 -2.64 -0.01 -0.88 -0.26 0.14 0.15 0.01 -0.01 -0.57 0.3 -0.03 0.04 0.41 0.8 0.42 0.01 0.11 -0.46 0.02 0.22 -0.18 -0.03 -0.01 0.04 -0.16 0.15 0.37 0.45 0.84 0.3 -0.14 -0.31 0.63 0.68 0.44 -0.59 -1.65 0.36 0.78 0.11 -0.43 -0.25 -0.5 0.43 0.43 -0.46 -0.15 0.64 0.55 -0.64 -0.01 -0.1 -0.23 -0.04 -0.03 At5g14780 246595_at FDH Encodes a NAD-dependent formate dehydrogenase. 4 response to wounding metabolism carbon monoxide dehydrogenase pathway | acetate fermentation | respiration (anaerobic)-- electron donors reaction list Glyoxylate and dicarboxylate metabolism | Methane metabolism



2.32 5.18
At3g26180 0.539 CYP71B20 cytochrome P450 family protein 0.24 -0.47 -0.53 -0.7 0.07 -0.31 0.03 0.74 0.79 0.01 0.01 0.01 0.01 -0.93 -0.47 -1.18 -0.32 -0.02 0.52 1.81 0.86 0.63 0.85 -0.39 -0.76 0.5 0.79 0.11 -0.71 0.94 0.31 0.04 0.49 0.34 0.28 -0.16 -0.24 0.01 1.74 0.01 0.01 0.01 0.01 0.27 -0.36 0.19 0.59 0.43 0.49 0.34 0.31 0.7 0 0.13 0.4 0.23 0.23 -0.07 -0.37 -0.42 0.05 -0.08 -0.32 -1.11 -1.84 -1.64 -1.12 -1.54 -1.45 -1.64 -0.5 1.33 0.35 -0.28 0.28 0.13 -0.35 -1.14 0.74 -0.16 -0.38 -0.7 -0.04 0.28 0.01 0.04 -0.05 0.05 -0.87 -0.95 0.67 -0.28 0.03 -0.37 -0.01 -0.13 -0.2 -0.91 0.72 0.01 0.56 0.01 -0.27 -0.06 0.28 -0.05 -0.79 0.35 0.25 0.19 -0.36 0.27 0.74 -0.08 0.01 -2.98 0.01 0.86 2.8 0.8 0.1 0.81 0.15 0.46 0 -0.11 0.08 0.41 0.01 -0.28 2.35 -0.3 0.14 0.39 -1.05 -0.96 0.16 0.68 0.08 1.22 -0.53 -0.24 -0.4 -0.39 At3g26180 257634_s_at (m) CYP71B20 cytochrome P450 family protein 1






cytochrome P450 family 2.00 5.77
At4g38460 0.539
geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative 0.34 -0.32 -0.06 -0.31 0.17 -0.05 -0.38 0.37 0.98 0.1 0.32 -0.32 -0.37 -0.17 0.05 0.04 0.22 -0.01 0.56 0.08 0.06 0.26 0.3 -0.14 0.12 0.03 0.44 0.27 -0.04 0.21 0.23 0.12 0.32 0.59 0.47 -0.15 0.82 0.27 0.33 0.05 0.05 0.05 0.05 0.78 -0.16 -0.43 0.21 0.13 -0.23 0.04 0.01 0.23 0.9 0.22 0.56 0.15 0.15 0.26 0.71 -0.15 -0.4 -0.21 -0.6 -0.56 -0.34 -0.52 -1.12 -0.79 -0.61 -0.89 0.36 0.66 -0.02 0.35 0.01 -0.28 -0.82 -0.61 0.12 0.1 -0.08 0.42 0.25 0.84 0.17 -0.2 -0.24 0.22 -1.46 -1.19 0.11 -0.24 -0.03 0.28 0.18 -0.13 -0.06 -0.44 -0.28 -1.1 0.08 -0.27 0.69 -0.15 -0.81 -0.08 -0.87 -0.05 0.3 0.15 0.06 0.12 0.51 0.38 -0.08 -0.5 0.16 -0.07 0.21 -0.08 -0.6 0.28 0.31 -0.12 0.09 0 0.55 0.22 0.05 0.62 -0.23 -0.52 0.12 0.55 0.54 0.49 0.08 0.62 -0.55 -0.25 -0.52 -0.95 -0.63 0.03 At4g38460 252996_s_at
geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative 4
biosynthesis of derivatives of homoisopentenyl pyrophosphate

Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Biosynthesis of prenyl diphosphates
prenyl diphosphate (GPP,FPP, GGPP) biosynthesis
1.47 2.44
At1g21640 0.528 NADK2 ATP:NAD 2'-phosphotransferase -0.09 0.15 -0.06 0.24 0.38 0.35 0.18 0.25 0.31 0.06 0.45 0.14 0.44 -0.06 0.18 0.13 -0.11 0.28 0.26 0.18 0.04 -0.71 0.49 -0.03 -1.19 0.19 0.12 0.6 -0.17 0.14 0.22 -0.07 0.35 -0.14 0.48 0.18 0.24 0.06 0.13 0.06 0.06 0.06 0.06 0.19 -0.08 -0.02 -0.09 0.36 -0.05 -0.05 0.28 0.18 0.37 -0.16 -0.18 0.14 -0.04 -0.03 0.37 0.33 -0.14 0.08 -0.32 0.23 -0.82 -0.65 -0.77 -0.99 -0.54 -0.73 -0.41 0.28 0.31 0.01 0.23 0.27 0.43 -1.09 0.32 0.13 -0.15 0.26 0.72 0.31 0.18 -0.62 -0.09 -0.25 -1.32 -1.34 0.26 -0.08 0.12 0.03 0.17 -0.16 -0.1 -0.03 -0.07 -0.27 0.5 0.15 -0.02 0.22 0.62 0.07 -0.8 -0.39 -0.28 -0.13 -0.25 0.17 -0.03 -0.1 0.21 0.36 0.56 -0.04 0.63 -0.37 -0.12 0 0.02 -0.13 -0.1 -0.49 -0.51 -0.12 0.06 -0.3 -0.08 -0.43 0.32 0.37 -0.07 0.01 0.28 0.32 0.41 0.13 -0.6 -0.12 0.32 0.01 At1g21640 262506_at NADK2 ATP:NAD 2'-phosphotransferase 6

NAD phosphorylation and dephosphorylation




1.25 2.07
At3g26170 0.528 CYP71B19 cytochrome P450 family protein 0.24 -0.48 -0.53 -0.71 0.07 -0.31 0.03 0.74 0.78 0 0 0 0 -0.93 -0.47 -1.18 -0.33 -0.02 0.51 1.81 0.85 0.63 0.84 -0.4 -0.76 0.5 0.78 0.11 -0.72 0.94 0.31 0.03 0.49 0.34 0.28 -0.17 -0.24 0 1.74 0 0 0 0 0.27 -0.36 0.18 0.57 0.43 0.48 0.33 0.31 0.7 0 0.13 0.39 0.22 0.22 -0.07 -0.37 -0.42 0.04 -0.09 -0.33 -1.11 -1.85 -1.64 -1.12 -1.55 -1.45 -1.65 -0.51 1.32 0.35 -0.28 0.28 0.13 -0.35 -1.14 0.74 -0.16 -0.39 -0.7 -0.04 0.28 0 0.04 -0.06 0.05 -0.88 -0.95 0.67 -0.28 0.03 -0.37 -0.01 -0.14 -0.21 -0.92 0.71 0 0.56 0 -0.27 -0.07 0.28 -0.05 -0.8 0.34 0.25 0.18 -0.37 0.26 0.74 -0.09 0 -2.98 0 0.85 2.79 0.79 0.1 0.81 0.14 0.45 0 0.6 0.07 0.4 0 -0.28 2.34 -0.31 0.13 0.38 -1.05 -0.97 0.15 0.68 0.07 1.21 -0.54 -0.24 -0.41 -0.39 At3g26170 257634_s_at (m) CYP71B19 cytochrome P450 family protein 1






cytochrome P450 family 2.00 5.77
At4g14070 0.528
similar to AMP-binding protein from Brassica napus; cDNA acyl-CoA synthetase-like protein -0.09 0.14 0.41 0.27 0.5 0.16 0.31 0.08 0.54 0.14 -0.36 0.05 -0.07 0.03 0.28 0.24 0.14 0.52 0.4 0.16 0.13 0.3 0.66 -0.12 -0.68 -0.11 -0.03 0.26 -0.46 0.13 0.18 0.28 -0.26 -0.09 0.22 -0.05 0.47 -0.06 0.05 0.05 0.05 0.05 0.05 0.41 0.24 -0.21 -0.02 -0.04 -0.14 -0.25 -0.35 0.13 0.37 -0.23 0.13 -0.13 -0.44 0.28 0.36 0.35 0.02 0.47 0.06 -0.06 -1.01 -1.12 -0.97 -1.06 -1 -1.01 -1.01 0.15 0.24 0.6 0.21 0.25 0.53 0.44 -0.21 0.39 -0.18 0.37 0.14 0.15 0.47 -0.4 -0.09 0.04 -0.96 -1.12 0.26 -0.05 0.26 -0.52 0.33 -0.05 0.18 0.21 -0.48 -0.35 0.13 -0.1 -0.3 -0.21 0.65 -0.21 -0.56 -0.07 0.25 -0.02 0.33 -0.28 0.09 -0.02 0.05 -0.23 0.05 0.01 0.14 0.17 0.38 0.25 0.13 0.2 -0.18 -0.89 0.09 0.03 0.05 0.26 -0.04 -0.53 0.02 0.05 0.24 -0.03 0.3 0.47 0.01 0.36 -0.13 0.23 -0.36 -0.18 At4g14070 245621_at
similar to AMP-binding protein from Brassica napus; cDNA acyl-CoA synthetase-like protein 10
lipid, fatty acid and isoprenoid biosynthesis
Fatty acid metabolism Leaf Glycerolipid Biosynthesis | Leaf Glycerolipid Biosynthesis in Plastid Miscellaneous acyl lipid metabolism
Acyl activating enzymes , CoA ligases, clade I 1.44 1.79



































































































































































page created by Alexandre OLRY 07/06/06