"Pathway" "Pathway.source" "V3" "V4" "V5" "V6" "IN THREE DATA SETS" "" "sum.of.scores" "sum.of.genes" "" "" "jasmonic acid biosynthesis" "TAIR-GO" "188" "26" "" "" "jasmonic acid biosynthesis" "TAIR-GO" "188" "26" "" "" "Lipid signaling" "AcylLipid" "104" "14" "" "" "response to wounding" "TAIR-GO" "90" "12" "" "" "lipoxygenase pathway" "AraCyc" "74" "11" "" "" "ORGAN DATA SET" "quantDE" "2.896183" "maxDE" "5.9495055" "ORGAN DATA SET" "STRESS DATA SET" "quantDE" "2.773544" "maxDE" "6.568501" "STRESS DATA SET" "jasmonic acid biosynthesis" "TAIR-GO" "22" "1.02142501425547e-25" "3" "5.91522398115078e-06" "jasmonic acid biosynthesis" "AraCyc" "22" "1.13121117537815e-36" "3" "2.00263222205461e-08" "Lipid signaling" "AcylLipid" "22" "7.74177251196835e-08" "3" "0.0365490276589250" "response to wounding" "TAIR-GO" "16" "6.15537240729423e-15" "2" "0.000410990718624727" "lipid, fatty acid and isoprenoid metabolism" "FunCat" "14" "5.80653981198453e-25" "2" "2.11609103293403e-06" "lipoxygenase pathway" "AraCyc" "12" "7.74656359509035e-20" "2" "1.15216078657404e-06" "Cell Wall Carbohydrate Metabolism" "BioPath" "10" "0.00230718165670953" "1" "0.168444161176948" "cellulose biosynthesis" "BioPath" "10" "6.88471292877876e-11" "1" "0.00404491802603490" "Leaf Glycerolipid Biosynthesis" "BioPath" "10" "0.000284870972724284" "1" "0.0538887337242018" "Leaf Glycerolipid Biosynthesis in Plastid" "BioPath" "10" "7.74804444451137e-09" "1" "0.00644199885493294" "chloroplast envelope" "TAIR-GO" "10" "0" "1" "0" "galactolipid biosynthesis" "TAIR-GO" "10" "4.22521386069678e-14" "1" "0.00046679557527372" "glycolipid biosynthesis" "TAIR-GO" "10" "1.46030187698175e-15" "1" "0.000281224314299067" "lipid biosynthesis" "TAIR-GO" "10" "4.22521386069678e-14" "1" "0.00046679557527372" "cellulose biosynthesis" "AraCyc" "10" "2.74776714726786e-11" "1" "0.00318621836245821" "glycosylglyceride biosynthesis" "AraCyc" "10" "6.97325311560237e-17" "1" "7.34073838158256e-05" "Synthesis of membrane lipids in plastids" "AcylLipid" "10" "1.29700926702795e-05" "1" "0.0180541577822377" "HORMONE DATA SET" "quantDE" "2.639785" "maxDE" "7.6888256" "HORMONE DATA SET" "Lipid signaling" "AcylLipid" "46" "1.60743602804056e-24" "6" "0.00120900594597143" "jasmonic acid biosynthesis" "TAIR-GO" "36" "3.35891434457825e-41" "5" "7.06356414174963e-08" "jasmonic acid biosynthesis" "AraCyc" "36" "3.3220702617259e-51" "5" "3.41865802291198e-09" "lipoxygenase pathway" "AraCyc" "36" "1.39171310640376e-59" "5" "1.76213046675795e-10" "response to wounding" "TAIR-GO" "30" "3.64256359210459e-28" "4" "6.1521517732987e-06" "Isoprenoid Biosynthesis in the Cytosol and in Mitochondria" "BioPath" "20" "1.35125109509001e-11" "2" "0.0109179474942622" "oxylipin pathway" "LitPath" "20" "0" "2" "0" "defense response" "TAIR-GO" "17" "4.04164294621253e-13" "3" "0.000101639654245970" "transport " "FunCat" "13" "2.62744263491145e-28" "3" "0" "transport facilitation" "FunCat" "13" "0" "3" "0" "transport ATPases" "FunCat" "11" "4.15417280855664e-10" "2" "0.00151602091185498" "Glutathione metabolism" "KEGG" "11" "2.16258964621239e-09" "2" "0.000851533123562804" "Biosynthesis of prenyl diphosphates" "BioPath" "10" "2.05739785398811e-05" "1" "0.0423075873418091" "Chlorophyll biosynthesis and breakdown" "BioPath" "10" "3.93650704389992e-06" "1" "0.0248086734053863" "Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone)" "BioPath" "10" "0.00714368418141473" "1" "0.127946136382813" "sterol biosynthesis" "BioPath" "10" "2.79255573399534e-07" "1" "0.0157593473814205" "sucrose metabolism" "BioPath" "10" "1.60935226939944e-09" "1" "0.00855788480150165" "chlorophyll catabolism" "TAIR-GO" "10" "1.6204165322585e-14" "1" "0.000502177581415069" "growth" "TAIR-GO" "10" "6.34560033125406e-06" "2" "0.00347357092777976" "response to jasmonic acid stimulus" "TAIR-GO" "10" "2.76730397192529e-11" "1" "0.00340209664629722" "response to stress" "TAIR-GO" "10" "4.5456118756616e-13" "1" "0.000996165829667815" "sterol biosynthesis" "TAIR-GO" "10" "2.68193258646535e-06" "1" "0.0276928174499891" "sterol biosynthesis" "AraCyc" "10" "1.42210040818688e-08" "1" "0.0114684419830654" "glycolysis and gluconeogenesis" "FunCat" "10" "0.00162011756432647" "1" "0.212979716376054" "lipid, fatty acid and isoprenoid metabolism" "FunCat" "10" "5.64233125355656e-07" "1" "0.0358987199889991" "Fatty acid metabolism" "KEGG" "10" "2.95096475804087e-08" "1" "0.0103793169282528" "Galactose metabolism" "KEGG" "10" "1.69739722290869e-09" "1" "0.00867398268026225" "gamma-Hexachlorocyclohexane degradation" "KEGG" "10" "1.39937013684214e-11" "1" "0.00263596309533382" "Starch and sucrose metabolism" "KEGG" "10" "7.01173328874526e-06" "1" "0.0459201114171502" "Tryptophan metabolism" "KEGG" "10" "2.05741041558169e-10" "1" "0.0103793169282528" "brassinosteroid biosynthesis" "LitPath" "10" "0.00130837745198504" "1" "0.084240320265658" "chlorophyll and phytochromobilin metabolism" "LitPath" "10" "0.0377204558240343" "1" "0.179884789953963" "chlorophyll catabolism" "LitPath" "10" "1.28866965001307e-11" "1" "0.00154242499433863" "prenyl diphosphate (GPP,FPP, GGPP) biosynthesis" "LitPath" "10" "5.31278900766886e-05" "1" "0.0457351861313355" "sterol and brassinosteroid biosynthesis" "LitPath" "10" "0.000110829655183009" "1" "0.0457351861313355" "salicylic acid biosynthesis" "TAIR-GO" "7" "6.07439370860441e-12" "1" "0.000168769535073685" "Oxidative phosphorylation" "KEGG" "7" "6.88031102125299e-05" "1" "0.0437241421307889" "MUTANT DATA SET" "quantDE" "2.53387" "maxDE" "6.04679274" "MUTANT DATA SET" "response to wounding" "TAIR-GO" "44" "7.13346712928213e-48" "6" "3.29277859233145e-09" "jasmonic acid biosynthesis" "TAIR-GO" "36" "2.37282896054372e-40" "5" "5.464820352274e-08" "jasmonic acid biosynthesis" "AraCyc" "36" "2.7340591476603e-58" "5" "1.61860610705257e-11" "Lipid signaling" "AcylLipid" "36" "5.55844280439936e-16" "5" "0.0186163673377279" "Phenylpropanoid Metabolism" "BioPath" "26" "2.80613749769426e-17" "4" "0.000209109750709219" "lipoxygenase pathway" "AraCyc" "26" "1.17778961542297e-43" "4" "2.77773704442996e-10" "Aromatic amino acid (Phe, Tyr, Trp) metabolism" "BioPath" "24" "1.06308133411454e-26" "3" "3.17334283641539e-05" "tryptophan biosynthesis" "TAIR-GO" "24" "4.23185749904066e-23" "3" "4.36397028997493e-05" "tryptophan biosynthesis" "AraCyc" "24" "1.3938378700656e-32" "3" "1.83786542841084e-06" "Shikimate pathway" "LitPath" "24" "3.60920008488245e-14" "3" "0.00253342061551766" "Trp biosyntesis" "LitPath" "24" "1.53434197541483e-22" "3" "8.02382270682338e-05" "Phenylalanine, tyrosine and tryptophan biosynthesis" "KEGG" "20" "1.50017517617301e-36" "2" "4.98517985355533e-06" "response to pathogenic bacteria" "TAIR-GO" "14" "3.09856227608719e-19" "2" "1.79655171305726e-05" "anthranilate synthase complex" "TAIR-GO" "10" "9.46474529462919e-17" "1" "0.000155787263144940" "defense response" "TAIR-GO" "10" "4.28223531462307e-06" "2" "0.00180449409781152" "growth" "TAIR-GO" "10" "1.00530932114154e-05" "2" "0.00309758271487929" "response to jasmonic acid stimulus" "TAIR-GO" "10" "4.67154683519731e-11" "1" "0.00314576475074544" "oxylipin pathway" "LitPath" "10" "7.67298307268834e-16" "1" "0.000238942397504572"