"Pathway"	"Pathway.source"	"V3"	"V4"	"V5"	"V6"
"IN ALL DATA SETS"	""	"sum.of.scores"	"sum.of.genes"	""	""
"Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone)"	"BioPath"	"870"	"108"	""	""
"C-compound and carbohydrate metabolism"	"FunCat"	"691"	"122"	""	""
"biogenesis of chloroplast"	"FunCat"	"594"	"92"	""	""
"chlorophyll biosynthesis"	"AraCyc"	"592"	"70"	""	""
"photosynthesis"	"FunCat"	"587"	"89"	""	""
"chlorophyll biosynthesis"	"TAIR-GO"	"537"	"61"	""	""
"chlorophyll biosynthesis"	"LitPath"	"511"	"58"	""	""
"photosynthesis"	"TAIR-GO"	"503"	"72"	""	""
"Chlorophyll biosynthesis and breakdown"	"BioPath"	"431"	"51"	""	""
"glycolysis and gluconeogenesis"	"FunCat"	"418"	"70"	""	""
"chlorophyll and phytochromobilin metabolism"	"LitPath"	"413"	"48"	""	""
"Carbon fixation"	"KEGG"	"395"	"63"	""	""
"additional photosystem II components"	"BioPath"	"390"	"58"	""	""
"Porphyrin and chlorophyll metabolism"	"KEGG"	"355"	"42"	""	""
"Glycolysis / Gluconeogenesis"	"KEGG"	"298"	"46"	""	""
"Calvin cycle"	"AraCyc"	"264"	"51"	""	""
"transport "	"FunCat"	"257.5"	"43"	""	""
"Biosynthesis of steroids"	"KEGG"	"257"	"28"	""	""
"carotenoid biosynthesis"	"AraCyc"	"244"	"27"	""	""
"photorespiration"	"AraCyc"	"226"	"48"	""	""
"photosystem I"	"TAIR-GO"	"223"	"27"	""	""
"carotenoid biosynthesis"	"TAIR-GO"	"215"	"24"	""	""
"gluconeogenesis"	"AraCyc"	"213"	"33"	""	""
"Carotenoid and abscisic acid metabolism"	"LitPath"	"211"	"25"	""	""
"glycolysis IV"	"AraCyc"	"210"	"40"	""	""
"acetate fermentation"	"AraCyc"	"206"	"40"	""	""
"photorespiration"	"TAIR-GO"	"206"	"41"	""	""
"fructose degradation (anaerobic)"	"AraCyc"	"204"	"39"	""	""
"sorbitol fermentation"	"AraCyc"	"204"	"39"	""	""
"Pentose phosphate pathway"	"KEGG"	"202"	"33"	""	""
"biosynthesis of proto- and siroheme"	"AraCyc"	"190"	"31"	""	""
"Pathway for nuclear-encoded, thylakoid-localized proteins"	"BioPath"	"186"	"24"	""	""
"Carotenoid biosynthesis"	"BioPath"	"178"	"21"	""	""
"carotenid biosynthesis"	"LitPath"	"178"	"21"	""	""
"Synthesis of membrane lipids in plastids"	"AcylLipid"	"169"	"19"	""	""
"photosystem II"	"TAIR-GO"	"167"	"20"	""	""
"Glycine, serine and threonine metabolism"	"KEGG"	"152"	"30"	""	""
"mRNA processing in chloroplast"	"BioPath"	"140"	"28"	""	""
"starch biosynthesis"	"AraCyc"	"138"	"17"	""	""
"glycerol degradation II"	"AraCyc"	"136"	"24"	""	""
"IPP (isopentenyl diphosphate) and DMAPP (dimethylallyl diphosphat) biosynthesis"	"LitPath"	"131"	"15"	""	""
"starch biosynthesis"	"TAIR-GO"	"131"	"16"	""	""
"Protein export"	"KEGG"	"125"	"18"	""	""
"MEP (methylerythritol P) pathway, plastids"	"LitPath"	"121"	"14"	""	""
"Thylakoid biogenesis and photosystem assembly"	"BioPath"	"114"	"12"	""	""
"glycine biosynthesis I"	"AraCyc"	"112"	"29"	""	""
"superpathway of serine and glycine biosynthesis II"	"AraCyc"	"112"	"29"	""	""
"glyceraldehyde 3-phosphate degradation"	"AraCyc"	"111"	"18"	""	""
"Benzoate degradation via hydroxylation"	"KEGG"	"102"	"11"	""	""
"glycosylglyceride desaturation pathway"	"AraCyc"	"101"	"11"	""	""
"lactose degradation IV"	"AraCyc"	"94"	"23"	""	""
"Early light-inducible proteins"	"BioPath"	"92"	"13"	""	""
"phospholipid desaturation pathway"	"AraCyc"	"90"	"9"	""	""
"1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradatio"	"KEGG"	"90"	"9"	""	""
"1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation"	"KEGG"	"90"	"9"	""	""
"Androgen and estrogen metabolism"	"KEGG"	"90"	"9"	""	""
"isopentenyl diphosphate biosynthesis -- mevalonate-independent"	"AraCyc"	"88"	"10"	""	""
"Translation (chloroplast)"	"BioPath"	"86"	"15"	""	""
"glycine degradation I"	"AraCyc"	"86"	"20"	""	""
"protein folding"	"TAIR-GO"	"86"	"11"	""	""
"formylTHF biosynthesis"	"AraCyc"	"84"	"14"	""	""
"Delta-pH pathway"	"BioPath"	"82"	"10"	""	""
"transcription"	"FunCat"	"73"	"11"	""	""
"serine biosynthesis"	"AraCyc"	"64"	"24"	""	""
"photoinhibition"	"TAIR-GO"	"61"	"7"	""	""
"photosystem II (sensu Viridiplantae)"	"TAIR-GO"	"60"	"7"	""	""
"chlorophyll catabolism"	"TAIR-GO"	"60"	"6"	""	""
"chlorophyll catabolism"	"LitPath"	"60"	"6"	""	""
"phytochromobilin biosynthesis"	"LitPath"	"60"	"6"	""	""
"plastid organization and biogenesis"	"TAIR-GO"	"60"	"10"	""	""
"RNA processing"	"TAIR-GO"	"60"	"10"	""	""
"transcriptional control"	"FunCat"	"59"	"8"	""	""
"regulation of transcription"	"TAIR-GO"	"52"	"6"	""	""
"phytochromobilin biosynthesis"	"TAIR-GO"	"50"	"5"	""	""
"plastoquinone biosynthesis"	"TAIR-GO"	"50"	"5"	""	""
"xanthophyll cycle"	"TAIR-GO"	"50"	"5"	""	""
"plastoquinone biosynthesis"	"AraCyc"	"50"	"5"	""	""
"xanthophyll cycle"	"AraCyc"	"50"	"5"	""	""
"glycine decarboxylation via glycine cleavage system"	"TAIR-GO"	"48"	"8"	""	""
"sucrose biosynthesis"	"TAIR-GO"	"46"	"5"	""	""
"protein binding"	"TAIR-GO"	"40"	"4"	""	""
"protein complex assembly"	"TAIR-GO"	"40"	"4"	""	""
"RNA binding"	"TAIR-GO"	"40"	"4"	""	""
"thylakoid membrane organization and biogenesis"	"TAIR-GO"	"40"	"4"	""	""
"chlorophyll a biosynthesis"	"LitPath"	"40"	"4"	""	""
"carbohydrate biosynthesis"	"TAIR-GO"	"36"	"4"	""	""
"ORGAN DATA SET"	"quantDE"	"3.581066"	"maxDE"	"4.8709012"	"ORGAN DATA SET"
"Photosystems "	"BioPath"	"494"	"5.84920248052363e-173"	"73"	"4.33174817624188e-30"
"Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone)"	"BioPath"	"341"	"7.0323808548457e-64"	"43"	"8.64430777797785e-12"
"C-compound and carbohydrate metabolism"	"FunCat"	"213"	"6.63030657986317e-05"	"40"	"0.0139419464603316"
"additional photosystem II components"	"BioPath"	"209"	"1.29300686561732e-79"	"30"	"1.03757359447105e-15"
"biogenesis of chloroplast"	"FunCat"	"209"	"7.04220523340311e-84"	"32"	"9.67456592880827e-17"
"Photosystem I"	"BioPath"	"189"	"9.28726034944882e-36"	"29"	"2.63418450046877e-08"
"photosynthesis"	"FunCat"	"184"	"7.27046620766756e-101"	"29"	"2.30321994699367e-19"
"Chlorophyll biosynthesis and breakdown"	"BioPath"	"183"	"2.65267420263823e-57"	"22"	"5.94994703931833e-10"
"chlorophyll and phytochromobilin metabolism"	"LitPath"	"177"	"1.10532935407719e-79"	"21"	"1.86252114371785e-12"
"Photosynthesis"	"KEGG"	"159"	"4.44581275834644e-129"	"28"	"9.29269614549921e-28"
"photosystem I"	"TAIR-GO"	"149"	"0"	"18"	"0"
"Chlorophyll a/b binding proteins"	"BioPath"	"146"	"1.96024652099085e-85"	"18"	"3.56431208379126e-14"
"glycolysis and gluconeogenesis"	"FunCat"	"143"	"4.79167939760622e-13"	"24"	"0.000837131796902773"
"Porphyrin and chlorophyll metabolism"	"KEGG"	"141"	"1.04214249525257e-92"	"17"	"8.46007363935906e-14"
"chlorophyll biosynthesis"	"AraCyc"	"140"	"1.32773937931825e-53"	"18"	"5.35404465575054e-06"
"Carbon fixation"	"KEGG"	"129"	"4.21441939666718e-39"	"20"	"3.53271115704027e-08"
"Photosystem II"	"BioPath"	"121"	"1.40641857715892e-16"	"16"	"0.000586669641684067"
"photosystem II"	"TAIR-GO"	"116"	"0"	"14"	"0"
"transport "	"FunCat"	"107"	"0"	"17"	"0"
"photosynthesis"	"TAIR-GO"	"100"	"1.34494395850041e-44"	"12"	"1.93061628878018e-06"
"Calvin cycle"	"AraCyc"	"93"	"5.74311059641902e-36"	"17"	"9.34431432433645e-08"
"Biosynthesis of steroids"	"KEGG"	"86"	"2.91128356654981e-14"	"10"	"0.00128451742027011"
"chlorophyll biosynthesis"	"TAIR-GO"	"85"	"5.85482433227057e-31"	"9"	"9.20083631132405e-06"
"chlorophyll binding"	"TAIR-GO"	"80"	"1.9071545776748e-39"	"9"	"3.09226884654308e-06"
"biosynthesis of proto- and siroheme"	"AraCyc"	"80"	"1.83072451308297e-20"	"12"	"0.000824445859854277"
"Folding, Sorting and Degradation"	"KEGG"	"77"	"0.00167821371958776"	"12"	"0.120615920087454"
"Carotenoid and abscisic acid metabolism"	"LitPath"	"75"	"1.62525966079911e-22"	"9"	"0.000226384996440320"
"Glycolysis / Gluconeogenesis"	"KEGG"	"72"	"5.4394474995014e-06"	"11"	"0.0282027282098877"
"Pentose phosphate pathway"	"KEGG"	"69"	"1.97510382415489e-20"	"11"	"9.8912673609526e-05"
"acetate fermentation"	"AraCyc"	"68"	"4.91711028992071e-07"	"12"	"0.066731924055663"
"fructose degradation (anaerobic)"	"AraCyc"	"68"	"4.41630494239316e-08"	"12"	"0.0391821733896394"
"glycolysis IV"	"AraCyc"	"68"	"6.0742310439167e-08"	"12"	"0.0439024770280906"
"sorbitol fermentation"	"AraCyc"	"68"	"6.50439968246175e-07"	"12"	"0.0545065591764431"
"chlorophyll and phyochromobilin biosynthesis"	"LitPath"	"68"	"1.22115627113282e-36"	"10"	"8.52563270241172e-08"
"Carotenoid biosynthesis"	"BioPath"	"66"	"1.72773560235898e-23"	"8"	"1.70680126226066e-05"
"porphyrin biosynthesis"	"TAIR-GO"	"66"	"1.00066503652590e-30"	"9"	"3.09226884654308e-06"
"carotenid biosynthesis"	"LitPath"	"66"	"2.79315374200992e-33"	"8"	"8.37031214367991e-07"
"gluconeogenesis"	"AraCyc"	"65"	"5.88524029240381e-10"	"10"	"0.0174147460020248"
"Synthesis of membrane lipids in plastids"	"AcylLipid"	"65"	"1.08320595828709e-33"	"7"	"6.76753301802963e-06"
"carotenoid biosynthesis"	"AraCyc"	"64"	"7.14025216741196e-36"	"7"	"1.75290844055234e-06"
"Pathway for nuclear-encoded, thylakoid-localized proteins"	"BioPath"	"62"	"7.01252146706517e-18"	"8"	"0.000150815188630021"
"starch metabolism"	"BioPath"	"62"	"0.000142268952295456"	"11"	"0.00865226039500342"
"chlorophyll biosynthesis"	"LitPath"	"59"	"9.35287040460454e-28"	"6"	"3.02401409306847e-05"
"transport facilitation"	"FunCat"	"58"	"0"	"9"	"0"
"Starch and sucrose metabolism"	"KEGG"	"58"	"0.01778059390698"	"9"	"0.102135026334858"
"photorespiration"	"AraCyc"	"54"	"3.11321160121464e-16"	"12"	"9.80405163541369e-05"
"mRNA processing in chloroplast"	"BioPath"	"50"	"6.62426259512011e-26"	"10"	"1.72770681657694e-07"
"lipid, fatty acid and isoprenoid metabolism"	"FunCat"	"49"	"0.00184939660111573"	"6"	"0.166369238134955"
"light harvesting complex"	"BioPath"	"48"	"0"	"6"	"0"
"energy"	"FunCat"	"48"	"0"	"7"	"0"
"Protein export"	"KEGG"	"47"	"1.18174420815110e-14"	"7"	"0.00223652642425842"
"electron transport"	"TAIR-GO"	"45"	"1.31592845132180e-05"	"6"	"0.039646930070379"
"Transcription (chloroplast)"	"BioPath"	"44"	"1.22616240175176e-17"	"5"	"0.000350182309340719"
"transcription initiation"	"TAIR-GO"	"44"	"5.55299790535927e-19"	"5"	"0.000471964802646876"
"respiration"	"FunCat"	"44"	"3.91668203466465e-13"	"6"	"0.000592015046186836"
"Fructose and mannose metabolism"	"KEGG"	"44"	"0.000691038544421058"	"7"	"0.0381859691698999"
"aerobic respiration"	"FunCat"	"40"	"1.44739173991336e-10"	"5"	"0.00386238330940054"
"Benzoate degradation via hydroxylation"	"KEGG"	"40"	"1.25142024167282e-20"	"4"	"0.00077001602141678"
"IPP (isopentenyl diphosphate) and DMAPP (dimethylallyl diphosphat) biosynthesis"	"LitPath"	"40"	"0.00062909167226001"	"5"	"0.0547462153206205"
"MEP (methylerythritol P) pathway, plastids"	"LitPath"	"40"	"5.58976503844501e-17"	"5"	"0.000457271792979678"
"photosynthetic electron transport"	"TAIR-GO"	"39"	"3.33800095158542e-26"	"5"	"2.29505924730072e-05"
"glyceraldehyde 3-phosphate degradation"	"AraCyc"	"39"	"5.76074866697638e-10"	"6"	"0.0169041752590989"
"lactose degradation IV"	"AraCyc"	"39"	"0"	"9"	"0"
"pentose-phosphate pathway "	"FunCat"	"39"	"8.54462767099445e-09"	"6"	"0.0059012811971533"
"Chloroplastic protein turnover"	"BioPath"	"38"	"3.18499199430960e-12"	"8"	"5.62743800065255e-05"
"Thylakoid biogenesis and photosystem assembly"	"BioPath"	"38"	"7.56964406232798e-10"	"4"	"0.00448016792004769"
"hypersensitive response"	"TAIR-GO"	"38"	"1.29669660530856e-18"	"4"	"0.000707270087552306"
"photosynthesis light harvesting"	"TAIR-GO"	"38"	"5.9205617095253e-16"	"4"	"0.00489694669502687"
"glycerol degradation II"	"AraCyc"	"38"	"0.0120779645081899"	"6"	"0.311547889100705"
"glycine biosynthesis I"	"AraCyc"	"38"	"1.58859085997365e-05"	"9"	"0.0317853321756441"
"superpathway of serine and glycine biosynthesis II"	"AraCyc"	"38"	"1.42247514289437e-14"	"9"	"0.000115532764754539"
"Nitrogen metabolism"	"KEGG"	"38"	"0.0092984547209433"	"6"	"0.0160240159510134"
"chloroplast thylakoid membrane protein import"	"TAIR-GO"	"37"	"0"	"4"	"0"
"glycosylglyceride desaturation pathway"	"AraCyc"	"37"	"0"	"4"	"0"
"photosystem II type I  chlorophyll a /b binding protein"	"BioPath"	"36"	"0"	"4"	"0"
"protein biosynthesis"	"TAIR-GO"	"36"	"0"	"6"	"0"
"calmodulin binding"	"TAIR-GO"	"35"	"6.46632266835545e-09"	"4"	"0.0540558811235273"
"carotenoid biosynthesis"	"TAIR-GO"	"35"	"1.98113909525001e-10"	"4"	"0.00489694669502687"
"Glycine, serine and threonine metabolism"	"KEGG"	"35"	"0.000986467264033724"	"7"	"0.00931460894418259"
"Early light-inducible proteins"	"BioPath"	"34"	"1.54184335550733e-12"	"5"	"0.000350182309340719"
"photorespiration"	"TAIR-GO"	"34"	"0"	"5"	"0"
"starch biosynthesis"	"AraCyc"	"34"	"0"	"4"	"0"
"ATP synthase components"	"BioPath"	"32"	"6.04241227250797e-06"	"5"	"0.00606316202959411"
"photosystem I reaction center"	"BioPath"	"32"	"2.7787607951251e-13"	"7"	"1.73089277537226e-05"
"Photosystem II reaction center"	"BioPath"	"32"	"1.16029120862596e-06"	"4"	"0.0316833042663252"
"photosystem II (sensu Viridiplantae)"	"TAIR-GO"	"31"	"0"	"4"	"0"
"acetyl-CoA assimilation"	"AraCyc"	"31"	"0.047812707232187"	"5"	"0.191455315804303"
"oxidative branch of the pentose phosphate pathway"	"AraCyc"	"31"	"5.64514163895723e-15"	"8"	"2.67116465432775e-06"
"SRP (signal recognition particle)-dependent pathway for integral membrane proteins"	"BioPath"	"30"	"1.26797593815491e-07"	"3"	"0.0164549827951240"
"Translation (chloroplast)"	"BioPath"	"30"	"2.25856317678614e-11"	"5"	"0.000350182309340719"
"pentose-phosphate shunt"	"TAIR-GO"	"30"	"1.08090788069592e-05"	"4"	"0.0384573383958532"
"mannitol degradation"	"AraCyc"	"30"	"2.58511231296269e-06"	"6"	"0.0266976043347876"
"phospholipid desaturation pathway"	"AraCyc"	"30"	"2.48905339647073e-15"	"3"	"0.00101237602499830"
"sorbitol degradation"	"AraCyc"	"30"	"6.62652991797458e-06"	"6"	"0.0328022763496002"
"1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradatio"	"KEGG"	"30"	"2.32155328527792e-16"	"3"	"0.0046321570937265"
"1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation"	"KEGG"	"30"	"7.84662145554358e-21"	"3"	"0.000678751255494644"
"Androgen and estrogen metabolism"	"KEGG"	"30"	"6.23872803065061e-20"	"3"	"0.00147749793020812"
"Protein folding and associated processing"	"KEGG"	"30"	"4.57601886044483e-06"	"5"	"0.0195489687266006"
"Ferredoxin"	"BioPath"	"28"	"1.20438719440501e-09"	"6"	"0.00029263848962732"
"Oxygen-evolving enhancer protein"	"BioPath"	"28"	"1.70695380948969e-14"	"4"	"0.000305182466124784"
"carotene biosynthesis"	"TAIR-GO"	"28"	"0"	"3"	"0"
"photosynthesis light harvesting in photosystem I"	"TAIR-GO"	"28"	"1.64636878247931e-10"	"3"	"0.0185737049376223"
"formaldehyde assimilation I (serine pathway)"	"AraCyc"	"28"	"0.0478245445229404"	"5"	"0.211537148333385"
"starch biosynthesis"	"TAIR-GO"	"27"	"6.55525620395035e-06"	"3"	"0.0185737049376223"
"photosystem I subunit precursor"	"BioPath"	"26"	"0"	"5"	"0"
"Ion channels"	"KEGG"	"26"	"0.00167012233909833"	"4"	"0.407626522704592"
"Ligand-Receptor Interaction"	"KEGG"	"26"	"0.0025451471450988"	"4"	"0.442377999871352"
"photosynthetic electron transport in photosystem I"	"TAIR-GO"	"25"	"0"	"3"	"0"
"ClpP protease complex "	"BioPath"	"24"	"3.25388889946911e-09"	"6"	"0.00029263848962732"
"Delta-pH pathway"	"BioPath"	"24"	"0"	"3"	"0"
"photosystem II type II  chlorophyll a /b binding protein"	"BioPath"	"24"	"4.85000655815267e-11"	"3"	"0.00154516858565665"
"ATP-dependent proteolysis"	"TAIR-GO"	"24"	"4.94039794639554e-07"	"6"	"0.000675255434614985"
"glycine degradation I"	"AraCyc"	"24"	"2.53895807850491e-14"	"6"	"1.16119147542389e-05"
"isopentenyl diphosphate biosynthesis -- mevalonate-independent"	"AraCyc"	"24"	"1.96763282191016e-11"	"3"	"0.0027423770052351"
"channel / pore class transport"	"FunCat"	"24"	"4.33462895317785e-08"	"3"	"0.07716592947067"
"electron transport and membrane-associated energy conservation "	"FunCat"	"24"	"5.84739152634201e-11"	"3"	"0.0121953844179228"
"metabolism of energy reserves (e.g. glycogen, trehalose)"	"FunCat"	"24"	"0"	"4"	"0"
"Glyoxylate and dicarboxylate metabolism"	"KEGG"	"24"	"0.0330632722180929"	"4"	"0.0845271351252255"
"galactose degradation I"	"AraCyc"	"23"	"1.69471831965747e-17"	"6"	"4.03521987520072e-07"
"lipoxygenase pathway"	"AraCyc"	"23"	"0.000105190114147525"	"3"	"0.0495597396571517"
"biosynthesis of derivatives of homoisopentenyl pyrophosphate "	"FunCat"	"22"	"0.0115474969404807"	"3"	"0.07716592947067"
"transported compounds (substrates)"	"FunCat"	"22"	"0"	"5"	"0"
"Membrane Transport"	"KEGG"	"22"	"3.52074329958873e-05"	"3"	"0.111965469317010"
"Other ion-coupled transporters"	"KEGG"	"22"	"8.47141993555827e-09"	"3"	"0.0148135638181385"
"starch degradation"	"AraCyc"	"21"	"0.00154152385833274"	"4"	"0.0286577494017932"
"transcription"	"FunCat"	"21"	"9.22525883701323e-07"	"3"	"0.0618272715811528"
"transcriptional control"	"FunCat"	"21"	"0.000128606525772625"	"3"	"0.0365452887708282"
"Cytochrome b6/f complex"	"BioPath"	"20"	"0.007162332784608"	"2"	"0.258215874225155"
"Plastocyanin"	"BioPath"	"20"	"0"	"2"	"0"
"chlorophyll catabolism"	"TAIR-GO"	"20"	"1.08910468224440e-09"	"2"	"0.00484521903439351"
"chloroplast-nucleus signaling pathway"	"TAIR-GO"	"20"	"1.08910468224440e-09"	"2"	"0.00484521903439351"
"chloroplastic endopeptidase Clp complex"	"TAIR-GO"	"20"	"1.32749681606541e-10"	"5"	"0.000137644917657478"
"cytochrome b6f complex"	"TAIR-GO"	"20"	"4.04868916008086e-06"	"2"	"0.06489706272553"
"photosynthesis light harvesting in photosystem II"	"TAIR-GO"	"20"	"1.32975685742921e-07"	"2"	"0.037037563281481"
"photosynthetic water oxidation"	"TAIR-GO"	"20"	"0"	"2"	"0"
"glucose and glucose-1-phosphate degradation"	"AraCyc"	"20"	"8.97925316145713e-06"	"3"	"0.0648696357761722"
"biosynthesis of vitamins, cofactors, and prosthetic groups"	"FunCat"	"20"	"0.00117744157297903"	"3"	"0.0618272715811528"
"chlorophyll catabolism"	"LitPath"	"20"	"6.3731691580538e-11"	"2"	"0.00292806629978693"
"phytochromobilin biosynthesis"	"LitPath"	"20"	"0.00073487463665668"	"2"	"0.0659590020253253"
"glutamate degradation I"	"AraCyc"	"19"	"1.56867794315667e-06"	"3"	"0.0104492647981160"
"psbP family of thylakoid proteins"	"BioPath"	"18"	"7.49989118307487e-09"	"5"	"6.01833197269124e-05"
"nonphotochemical quenching"	"TAIR-GO"	"18"	"0"	"2"	"0"
"regulation of transcription"	"TAIR-GO"	"18"	"0"	"2"	"0"
"cysteine biosynthesis II"	"AraCyc"	"18"	"0.00967188564403028"	"7"	"0.00443179827344776"
"formylTHF biosynthesis"	"AraCyc"	"18"	"0.0206022187908465"	"3"	"0.171093169725771"
"serine biosynthesis"	"AraCyc"	"18"	"2.69826199695225e-08"	"7"	"0"
"photoinhibition"	"TAIR-GO"	"17"	"5.70785633261649e-08"	"2"	"0.00484521903439351"
"photosystem II assembly"	"TAIR-GO"	"17"	"5.13125359469136e-11"	"2"	"0.00484521903439351"
"photosystem II stabilization"	"TAIR-GO"	"17"	"0"	"2"	"0"
"non-oxidative branch of the pentose phosphate pathway"	"AraCyc"	"17"	"0.000173503735205421"	"5"	"0.00265823428892989"
"protein degradation "	"FunCat"	"17"	"0.0231113431684202"	"3"	"0.154478029913280"
"ATP synthesis coupled proton transport"	"TAIR-GO"	"16"	"0.000809326814745857"	"2"	"0.037037563281481"
"magnesium chelatase complex"	"TAIR-GO"	"16"	"0"	"2"	"0"
"plastid organization and biogenesis"	"TAIR-GO"	"16"	"2.06692050543340e-07"	"3"	"0.000815776674158091"
"protein folding"	"TAIR-GO"	"16"	"0"	"2"	"0"
"proton transport"	"TAIR-GO"	"16"	"0.000809326814745857"	"2"	"0.037037563281481"
"PSII associated light-harvesting complex II"	"TAIR-GO"	"16"	"0"	"2"	"0"
"response to high light intensity"	"TAIR-GO"	"16"	"2.06692050543340e-07"	"2"	"0.00484521903439351"
"RNA processing"	"TAIR-GO"	"16"	"0"	"3"	"0"
"wax biosynthesis"	"TAIR-GO"	"16"	"0.0191652694396463"	"2"	"0.099639581066461"
"cyanate degradation"	"AraCyc"	"16"	"4.07083955901662e-07"	"4"	"0.0151124733893554"
"C-compound and carbohydrate utilization "	"FunCat"	"16"	"0"	"3"	"0"
"translation"	"FunCat"	"16"	"0.0225238213974692"	"4"	"0.0637858542354333"
"ribose degradation"	"AraCyc"	"15"	"1.47698656564078e-05"	"6"	"0.000182848214628088"
"Photosystem II protein"	"BioPath"	"14"	"3.43278763858493e-05"	"2"	"0.0078113579835963"
"oxygen evolving complex"	"TAIR-GO"	"14"	"6.47278555340259e-08"	"2"	"0.00484521903439351"
"photosynthesis, light reaction"	"TAIR-GO"	"14"	"9.7720089896663e-05"	"2"	"0.037037563281481"
"photosystem II antenna complex"	"TAIR-GO"	"14"	"6.47278555340259e-08"	"2"	"0.00484521903439351"
"accessory proteins of electron transport and membrane-associated energy conservation"	"FunCat"	"14"	"4.51612794903776e-11"	"2"	"0.00138232674039168"
"biosynthesis of glycosides"	"FunCat"	"14"	"4.51612794903776e-11"	"2"	"0.00138232674039168"
"metabolismn of primary metabolic sugars derivatives "	"FunCat"	"14"	"4.51612794903776e-11"	"2"	"0.00138232674039168"
"one-carbon compound metabolism"	"TAIR-GO"	"13"	"0.000100675428913193"	"2"	"0.0169335461150998"
"phosphate transport"	"TAIR-GO"	"13"	"5.84668139735857e-05"	"2"	"0.0169335461150998"
"starch catabolism"	"TAIR-GO"	"13"	"8.693352492504e-06"	"2"	"0.00484521903439351"
"folate biosynthesis"	"AraCyc"	"13"	"0.0243796455146889"	"2"	"0.241842045248742"
"Plastoquinone biosynthesis"	"BioPath"	"12"	"0"	"2"	"0"
"glycine decarboxylation via glycine cleavage system"	"TAIR-GO"	"12"	"0"	"2"	"0"
"plastid large ribosomal subunit"	"TAIR-GO"	"12"	"0"	"2"	"0"
"peptidoglycan biosynthesis"	"AraCyc"	"12"	"0.000415626822879651"	"2"	"0.0641185711841807"
"pyridoxal 5'-phosphate biosynthesis"	"AraCyc"	"12"	"3.0170967581111e-06"	"2"	"0.0151792013005309"
"thiamine biosynthesis"	"AraCyc"	"12"	"6.52547718271417e-05"	"2"	"0.0276160255958266"
"UDP-N-acetylglucosamine biosynthesis"	"AraCyc"	"12"	"0.00824428997037271"	"2"	"0.0439925812894064"
"accessory proteins of photosynthetic electron transport "	"FunCat"	"12"	"0"	"2"	"0"
"electron / hydrogen transport "	"FunCat"	"12"	"0.000376483856591487"	"2"	"0.0213436302759557"
"protein targeting, sorting and translocation"	"FunCat"	"11"	"0.0192588105249815"	"2"	"0.0695476573342183"
"stress response"	"FunCat"	"11"	"0"	"2"	"0"
"chlorophyll A apoprotein"	"BioPath"	"10"	"0.000528126430350699"	"1"	"0.102663562070123"
"FtsH protease (many homologues / subcellular localization ambiguous)"	"BioPath"	"10"	"0"	"1"	"0"
"Other cell wall metabolism related enzymes"	"BioPath"	"10"	"0.00176132008797267"	"1"	"0.0394287593457718"
"Transcriptional regulators (chloroplast)"	"BioPath"	"10"	"0.00176132008797267"	"1"	"0.0394287593457718"
"ADPG pyrophosphorylase complex (sensu Eukaryota)"	"TAIR-GO"	"10"	"0"	"1"	"0"
"carotenoid biosynthesis/TAS"	"TAIR-GO"	"10"	"0"	"1"	"0"
"cell communication"	"TAIR-GO"	"10"	"0"	"1"	"0"
"chalcone biosynthesis"	"TAIR-GO"	"10"	"0"	"1"	"0"
"chaperone cofactor dependent protein folding"	"TAIR-GO"	"10"	"0"	"1"	"0"
"chloroplast ATP synthase complex"	"TAIR-GO"	"10"	"0.000290231562296740"	"1"	"0.0287053611070866"
"chloroplast envelope"	"TAIR-GO"	"10"	"0"	"1"	"0"
"cytochrome b6f complex assembly"	"TAIR-GO"	"10"	"0"	"1"	"0"
"enzyme binding"	"TAIR-GO"	"10"	"0"	"1"	"0"
"etioplast organization and biogenesis"	"TAIR-GO"	"10"	"0"	"1"	"0"
"extrinsic to photosynthetic water oxidation"	"TAIR-GO"	"10"	"0"	"1"	"0"
"fatty acid oxidation"	"TAIR-GO"	"10"	"0"	"1"	"0"
"glucosinolate catabolism"	"TAIR-GO"	"10"	"0.000156978698375393"	"1"	"0.0287053611070866"
"heme biosynthesis"	"TAIR-GO"	"10"	"0"	"1"	"0"
"lipoic acid metabolism"	"TAIR-GO"	"10"	"0"	"1"	"0"
"photosynthesis, dark reaction"	"TAIR-GO"	"10"	"0"	"1"	"0"
"photosynthetic electron transport in cytochrome b6/f"	"TAIR-GO"	"10"	"1.90578232380348e-06"	"1"	"0.0287053611070866"
"photosynthetic electron transport in photosystem II"	"TAIR-GO"	"10"	"0"	"1"	"0"
"photosystem I reaction center"	"TAIR-GO"	"10"	"0.000290231562296740"	"1"	"0.0764256452524728"
"photosystem II reaction center"	"TAIR-GO"	"10"	"0.00207410748125525"	"1"	"0.135917744389846"
"phytochromobilin biosynthesis"	"TAIR-GO"	"10"	"0.0153172416496370"	"1"	"0.0764256452524728"
"plastoquinone biosynthesis"	"TAIR-GO"	"10"	"0.000290231562296740"	"1"	"0.0287053611070866"
"positive regulation of transcription"	"TAIR-GO"	"10"	"0.0116138621891451"	"1"	"0.0764256452524728"
"protein binding"	"TAIR-GO"	"10"	"0.0317148396912351"	"1"	"0.201837865128756"
"protein complex assembly"	"TAIR-GO"	"10"	"0"	"1"	"0"
"response to bacteria"	"TAIR-GO"	"10"	"0"	"1"	"0"
"response to chemical substance"	"TAIR-GO"	"10"	"0"	"1"	"0"
"response to gravity"	"TAIR-GO"	"10"	"0"	"1"	"0"
"response to temperature"	"TAIR-GO"	"10"	"0.0116138621891451"	"1"	"0.0764256452524728"
"RNA binding"	"TAIR-GO"	"10"	"0"	"1"	"0"
"tetrapyrrole binding"	"TAIR-GO"	"10"	"0"	"1"	"0"
"thylakoid membrane organization and biogenesis"	"TAIR-GO"	"10"	"0"	"1"	"0"
"xanthophyll cycle"	"TAIR-GO"	"10"	"0"	"1"	"0"
"xanthophyll metabolism"	"TAIR-GO"	"10"	"0"	"1"	"0"
"ascorbate biosynthesis"	"AraCyc"	"10"	"0.0302803655678759"	"1"	"0.304697798684736"
"glucosinolate biosynthesis from phenylalanine"	"AraCyc"	"10"	"0.0151719064529548"	"1"	"0.0761604168205794"
"plastoquinone biosynthesis"	"AraCyc"	"10"	"0.000660994695751335"	"1"	"0.0761604168205794"
"xanthophyll cycle"	"AraCyc"	"10"	"3.62418095118335e-06"	"1"	"0.0150319421713449"
"lipid, fatty acid and isoprenoid metabolism of energy reserves (e.g. glycogen, trehalose)"	"FunCat"	"10"	"0"	"1"	"0"
"nucleotide metabolism"	"FunCat"	"10"	"0"	"3"	"0"
"phosphate metabolism"	"FunCat"	"10"	"5.84083901184296e-07"	"2"	"0.00138232674039168"
"Alkaloid biosynthesis II"	"KEGG"	"10"	"0.0456784421919503"	"1"	"0.144178638479924"
"Other translation factors"	"KEGG"	"10"	"0.036584764794188"	"3"	"0.0723559067219288"
"Peptidoglycan biosynthesis"	"KEGG"	"10"	"0.00372043644242733"	"1"	"0.0609888925155593"
"chlorophyll a biosynthesis"	"LitPath"	"10"	"0"	"1"	"0"
"oxylipin pathway"	"LitPath"	"10"	"7.62377527685549e-05"	"1"	"0.0206489675516224"
"phytol biosynthesis"	"LitPath"	"10"	"0"	"1"	"0"
"plastochinone and phylloquinone biosynthesis"	"LitPath"	"10"	"0.0148045635233470"	"4"	"0.0127864962644132"
"calcium ion transport"	"TAIR-GO"	"9"	"0.000496871276579952"	"1"	"0.0287053611070866"
"carbohydrate biosynthesis"	"TAIR-GO"	"9"	"0"	"1"	"0"
"cation transport"	"TAIR-GO"	"9"	"8.10926036387165e-06"	"1"	"0.0287053611070866"
"glutamate metabolism"	"TAIR-GO"	"9"	"0"	"1"	"0"
"histidine biosynthesis"	"TAIR-GO"	"9"	"0.0104874999045598"	"1"	"0.0764256452524728"
"nitrogen compound metabolism"	"TAIR-GO"	"9"	"0.0104874999045598"	"1"	"0.0764256452524728"
"proteolysis and peptidolysis"	"TAIR-GO"	"9"	"0"	"1"	"0"
"response to light intensity"	"TAIR-GO"	"9"	"0"	"1"	"0"
"response to water deprivation"	"TAIR-GO"	"9"	"0"	"2"	"0"
"signal transduction"	"TAIR-GO"	"9"	"0"	"1"	"0"
"sucrose biosynthesis"	"TAIR-GO"	"9"	"0"	"1"	"0"
"alanine degradation III"	"AraCyc"	"9"	"6.03651014656844e-05"	"1"	"0.0414197614778954"
"superpathway of gluconate degradation"	"AraCyc"	"9"	"0.0271576409276428"	"5"	"0.00898156605102427"
"Taurine and hypotaurine metabolism"	"KEGG"	"9"	"0.00132732740984846"	"1"	"0.0609888925155593"
"carotenoid degradation"	"LitPath"	"9"	"1.17263089705107e-08"	"1"	"0.0206489675516224"
"Sec (secretory) pathway"	"BioPath"	"8"	"0.0230168816772098"	"2"	"0.0266099261774153"
"photosystem I (sensu Viridiplantae)"	"TAIR-GO"	"8"	"0"	"1"	"0"
"photosystem I antenna complex"	"TAIR-GO"	"8"	"0"	"1"	"0"
"epicuticular wax biosynthesis"	"AraCyc"	"8"	"0.00210844900223176"	"1"	"0.0414197614778954"
"C-compound and carbohydrate transport "	"FunCat"	"8"	"1.50798152688089e-05"	"2"	"0.00506971551399028"
"secondary biosynthesis of derivatives of homoisopentenyl pyrophosphate "	"FunCat"	"8"	"0"	"1"	"0"
"Thiamine metabolism"	"KEGG"	"8"	"0.0164141367355882"	"2"	"0.0248963326085539"
"Ubiquinone biosynthesis"	"KEGG"	"8"	"0.0455523962621193"	"3"	"0.0105744445152602"
"proton gradient regulation"	"BioPath"	"7"	"0"	"1"	"0"
"photomorphogenesis"	"TAIR-GO"	"7"	"0.0105467455716006"	"1"	"0.0764256452524728"
"response to pest, pathogen or parasite"	"TAIR-GO"	"7"	"1.07479609812731e-05"	"1"	"0.0287053611070866"
"signal sequence binding"	"TAIR-GO"	"7"	"0"	"1"	"0"
"STRESS DATA SET"	"quantDE"	"1.362177"	"maxDE"	"2.656539"	"STRESS DATA SET"
"Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone)"	"BioPath"	"239"	"2.44188015151005e-57"	"28"	"1.65094449244406e-08"
"C-compound and carbohydrate metabolism"	"FunCat"	"210"	"8.17144119338589e-20"	"36"	"0.000555855567724355"
"Photosystems "	"BioPath"	"207"	"2.07633941678627e-34"	"34"	"2.76218342343479e-09"
"Intermediary Carbon Metabolism"	"BioPath"	"174"	"3.13391955626674e-12"	"26"	"0.0241306315457221"
"photosynthesis"	"FunCat"	"153"	"1.18657100259411e-91"	"24"	"8.21122590283194e-17"
"biogenesis of chloroplast"	"FunCat"	"127"	"7.448325687718e-41"	"21"	"6.61661589380752e-10"
"glycolysis and gluconeogenesis"	"FunCat"	"127"	"1.05213372526567e-20"	"20"	"0.000409621816281559"
"Chlorophyll biosynthesis and breakdown"	"BioPath"	"115"	"5.66790142958305e-35"	"13"	"7.41779521352353e-06"
"chlorophyll and phytochromobilin metabolism"	"LitPath"	"109"	"7.8378872103151e-39"	"12"	"2.66673124999804e-06"
"Glycolysis / Gluconeogenesis"	"KEGG"	"108"	"3.45878556484091e-32"	"16"	"1.20017337241514e-05"
"Carbon fixation"	"KEGG"	"104"	"4.81525572435406e-35"	"17"	"1.79283480453891e-07"
"Porphyrin and chlorophyll metabolism"	"KEGG"	"91"	"1.76076419858182e-49"	"10"	"6.5036180943079e-07"
"Photosynthesis"	"KEGG"	"88"	"1.01256723373433e-49"	"17"	"2.81646456527829e-13"
"chlorophyll biosynthesis"	"AraCyc"	"82"	"1.11131358643280e-24"	"10"	"0.00561274887658535"
"Calvin cycle"	"AraCyc"	"81"	"1.31088567630233e-38"	"16"	"5.85727584822562e-09"
"additional photosystem II components"	"BioPath"	"79"	"9.13699114598092e-13"	"14"	"1.46895133168727e-05"
"Pentose phosphate pathway"	"KEGG"	"75"	"5.32289108812019e-34"	"12"	"1.79444035542914e-06"
"Leaf Glycerolipid Biosynthesis in Plastid"	"BioPath"	"67"	"0.00564059704198092"	"9"	"0.125021308358331"
"chlorophyll biosynthesis"	"TAIR-GO"	"65"	"4.16668802762499e-33"	"7"	"6.72464748240056e-06"
"acetate fermentation"	"AraCyc"	"62"	"1.36263011956673e-11"	"11"	"0.0168988095419095"
"fructose degradation (anaerobic)"	"AraCyc"	"62"	"8.88719998589607e-13"	"11"	"0.00932228342322976"
"glycolysis I"	"AraCyc"	"62"	"0.0209176364177605"	"11"	"0.488842152759544"
"glycolysis IV"	"AraCyc"	"62"	"1.26981434584909e-12"	"11"	"0.0105708127434094"
"sorbitol fermentation"	"AraCyc"	"62"	"1.88040191501228e-11"	"11"	"0.0134524306771837"
"Biosynthesis of steroids"	"KEGG"	"58"	"8.8381700319799e-09"	"6"	"0.0358310019701020"
"transport "	"FunCat"	"55"	"0"	"10"	"0"
"Carotenoid and abscisic acid metabolism"	"LitPath"	"55"	"2.19688829960264e-17"	"6"	"0.00231271654135891"
"gluconeogenesis"	"AraCyc"	"54"	"9.32144281155767e-12"	"8"	"0.0169777282284896"
"Pathway for nuclear-encoded, thylakoid-localized proteins"	"BioPath"	"52"	"6.13665458291714e-22"	"7"	"2.54665407670167e-05"
"Glycine, serine and threonine metabolism"	"KEGG"	"50"	"6.83903875136356e-15"	"11"	"2.49530076817904e-06"
"chlorophyll biosynthesis"	"LitPath"	"49"	"5.60697981955334e-26"	"5"	"4.51706888311174e-05"
"Carotenoid biosynthesis"	"BioPath"	"46"	"2.95959018901886e-18"	"5"	"0.000698021648115774"
"carotenoid biosynthesis"	"AraCyc"	"46"	"5.22399480638086e-25"	"5"	"7.91588437822507e-05"
"Fructose and mannose metabolism"	"KEGG"	"46"	"2.60183151630529e-08"	"7"	"0.0119561049719107"
"Pyruvate metabolism"	"KEGG"	"46"	"0.00315349403870952"	"6"	"0.224402826661263"
"Synthesis of fatty acids in plastids"	"AcylLipid"	"46"	"2.43980688730074e-18"	"7"	"6.79393273393196e-05"
"carotenid biosynthesis"	"LitPath"	"46"	"1.43524383630671e-21"	"5"	"0.000211979292621502"
"Transcription (chloroplast)"	"BioPath"	"44"	"4.12428401293297e-28"	"5"	"1.60215174046612e-05"
"transcription initiation"	"TAIR-GO"	"44"	"4.71960496799385e-32"	"5"	"1.15203048672640e-05"
"biosynthesis of proto- and siroheme"	"AraCyc"	"44"	"2.19865984674277e-08"	"7"	"0.0273726546322095"
"mRNA processing in chloroplast"	"BioPath"	"42"	"1.44669267663639e-26"	"8"	"6.18336119435509e-07"
"IPP (isopentenyl diphosphate) and DMAPP (dimethylallyl diphosphat) biosynthesis"	"LitPath"	"40"	"3.62574113263602e-08"	"4"	"0.0364674359437574"
"MEP (methylerythritol P) pathway, plastids"	"LitPath"	"40"	"1.92396968085169e-23"	"4"	"0.000694728235087768"
"electron transport"	"TAIR-GO"	"39"	"1.02984170685847e-11"	"5"	"0.00636354960548699"
"photosystem I"	"TAIR-GO"	"39"	"3.34450674632629e-34"	"5"	"3.11146349672285e-06"
"pentose-phosphate pathway "	"FunCat"	"39"	"5.15099046048852e-14"	"6"	"0.000991234319651522"
"Synthesis of membrane lipids in plastids"	"AcylLipid"	"39"	"1.96441903751501e-18"	"5"	"4.70875715307434e-05"
"Thylakoid biogenesis and photosystem assembly"	"BioPath"	"38"	"4.14781926309932e-18"	"4"	"0.000375504556952719"
"glycerol degradation II"	"AraCyc"	"38"	"4.29695501765484e-06"	"6"	"0.105504476962201"
"photorespiration"	"AraCyc"	"38"	"6.70040982967796e-12"	"10"	"0.000116992076532021"
"fatty acid biosynthesis"	"TAIR-GO"	"36"	"4.88422673469097e-11"	"4"	"0.00780945455870848"
"protein biosynthesis"	"TAIR-GO"	"36"	"0"	"6"	"0"
"Translation factors"	"KEGG"	"34"	"0.0246963389928803"	"10"	"0.0322341061323841"
"oxidative branch of the pentose phosphate pathway"	"AraCyc"	"33"	"1.76000751775570e-22"	"9"	"7.04868737507115e-09"
"cysteine biosynthesis I"	"AraCyc"	"32"	"0.000126993310694321"	"8"	"0.00656876967513245"
"glyceraldehyde 3-phosphate degradation"	"AraCyc"	"32"	"1.92261806849652e-10"	"5"	"0.0138402641789612"
"Cytochrome b6/f complex"	"BioPath"	"30"	"2.19410132358543e-14"	"3"	"0.0146224013651374"
"Translation (chloroplast)"	"BioPath"	"30"	"1.9352262591048e-18"	"5"	"1.60215174046612e-05"
"photosynthesis"	"TAIR-GO"	"30"	"2.08464740663913e-06"	"4"	"0.0278997283992705"
"porphyrin biosynthesis"	"TAIR-GO"	"30"	"3.05531535630951e-11"	"4"	"0.00388274706585877"
"isopentenyl diphosphate biosynthesis -- mevalonate-independent"	"AraCyc"	"30"	"7.44498120509653e-23"	"3"	"0.000841891030897743"
"lipid, fatty acid and isoprenoid metabolism"	"FunCat"	"30"	"0.0437468607579645"	"3"	"0.438576113570208"
"Protein export"	"KEGG"	"30"	"2.56412951341922e-08"	"5"	"0.0124296454940699"
"chlorophyll and phyochromobilin biosynthesis"	"LitPath"	"30"	"3.69936571486021e-09"	"4"	"0.00748035304035533"
"photosynthetic electron transport"	"TAIR-GO"	"29"	"6.23496366489127e-22"	"4"	"3.05929901813988e-05"
"Ferredoxin"	"BioPath"	"28"	"4.09464643912992e-16"	"6"	"8.55192777081799e-06"
"transport facilitation"	"FunCat"	"28"	"0"	"6"	"0"
"starch biosynthesis"	"AraCyc"	"27"	"0"	"4"	"0"
"Early light-inducible proteins"	"BioPath"	"26"	"4.20123333056644e-12"	"4"	"0.000375504556952719"
"energy"	"FunCat"	"26"	"0"	"4"	"0"
"carotenoid biosynthesis"	"TAIR-GO"	"25"	"8.2670084211887e-11"	"3"	"0.00328034445782899"
"Delta-pH pathway"	"BioPath"	"24"	"0"	"3"	"0"
"Protein folding / chaperonins (chloroplast)"	"BioPath"	"24"	"2.23548043869071e-05"	"4"	"0.0177655207811005"
"pentose-phosphate shunt"	"TAIR-GO"	"24"	"1.33186644582646e-08"	"3"	"0.0174171419281845"
"photosystem II"	"TAIR-GO"	"24"	"2.08630438313481e-18"	"3"	"0.000291161535345696"
"mannitol degradation"	"AraCyc"	"24"	"1.34459864516688e-06"	"5"	"0.0208304631302383"
"serine biosynthesis"	"AraCyc"	"24"	"1.95428736137624e-18"	"8"	"0"
"sorbitol degradation"	"AraCyc"	"24"	"2.98888347065801e-06"	"5"	"0.0250880388739520"
"Chloroplastic protein import via envelope membrane"	"BioPath"	"23"	"0.000899027583349794"	"4"	"0.0632159212400126"
"lactose degradation IV"	"AraCyc"	"23"	"1.39306800301709e-21"	"6"	"4.59007643177501e-08"
"Chloroplastic protein turnover"	"BioPath"	"22"	"5.74579746431007e-07"	"4"	"0.00857153593185564"
"fatty acid biosynthesis -- initial steps"	"AraCyc"	"22"	"0.0194566073679561"	"3"	"0.325422588802086"
"glycine biosynthesis I"	"AraCyc"	"22"	"0.00626668488678169"	"7"	"0.0355043436501684"
"glycine degradation I"	"AraCyc"	"22"	"7.73315781443276e-16"	"5"	"3.42588415941781e-05"
"superpathway of serine and glycine biosynthesis II"	"AraCyc"	"22"	"2.63715031002184e-07"	"7"	"0.00041664975204797"
"tRNA charging pathway"	"AraCyc"	"22"	"0.00187098292206104"	"9"	"0.00779974456977984"
"Aminoacyl-tRNA biosynthesis"	"KEGG"	"22"	"3.72971431474638e-05"	"9"	"0.000335118196468425"
"Fatty acid biosynthesis (path 1)"	"KEGG"	"22"	"2.20015025096120e-06"	"3"	"0.0374123153099355"
"metabolism of acyl-lipids in mitochondria"	"AcylLipid"	"22"	"2.03306212422005e-06"	"3"	"0.0141846466433298"
"transcription"	"FunCat"	"21"	"8.05073226529013e-10"	"3"	"0.0230389193908555"
"photosystem I reaction center"	"BioPath"	"20"	"1.88115925977505e-08"	"4"	"0.00184131205714549"
"carotene biosynthesis"	"TAIR-GO"	"20"	"8.91281345266822e-17"	"2"	"0.000709582781443448"
"chloroplast thylakoid membrane protein import"	"TAIR-GO"	"20"	"4.30790466969739e-13"	"2"	"0.00265043650150382"
"cytochrome b6f complex"	"TAIR-GO"	"20"	"1.14830153325048e-11"	"2"	"0.0115663992758077"
"biosynthesis of vitamins, cofactors, and prosthetic groups"	"FunCat"	"20"	"4.42127424212515e-06"	"3"	"0.0230389193908555"
"transported compounds (substrates)"	"FunCat"	"20"	"0"	"4"	"0"
"phytochromobilin biosynthesis"	"LitPath"	"20"	"2.13293818483925e-06"	"2"	"0.0231159103835793"
"non-oxidative branch of the pentose phosphate pathway"	"AraCyc"	"19"	"2.23895243830174e-08"	"6"	"4.86169615657984e-05"
"light harvesting complex"	"BioPath"	"18"	"3.1157632883643e-06"	"2"	"0.0245789659319963"
"psbP family of thylakoid proteins"	"BioPath"	"18"	"2.50956115368906e-13"	"5"	"2.54062897355469e-06"
"Sec (secretory) pathway"	"BioPath"	"18"	"1.97986771542897e-16"	"3"	"0.000188331981859026"
"nonphotochemical quenching"	"TAIR-GO"	"18"	"0"	"2"	"0"
"biosynthesis of pyrimidine ribonucleotides"	"AraCyc"	"18"	"0.000742541884284697"	"4"	"0.0501909990825129"
"formylTHF biosynthesis"	"AraCyc"	"18"	"0.000227496711211608"	"3"	"0.0721990665174187"
"photoinhibition"	"TAIR-GO"	"17"	"3.99029943947008e-13"	"2"	"0.000709582781443448"
"starch biosynthesis"	"TAIR-GO"	"17"	"1.80459454487735e-05"	"2"	"0.0189189729446266"
"glycosylglyceride desaturation pathway"	"AraCyc"	"17"	"5.81438710619966e-10"	"2"	"0.00271394498434964"
"mRNA synthesis "	"FunCat"	"17"	"0.0228517095630145"	"2"	"0.38474313307355"
"RNA synthesis "	"FunCat"	"17"	"0.0228517095630145"	"2"	"0.38474313307355"
"transcriptional control"	"FunCat"	"17"	"6.17304176141494e-05"	"2"	"0.0692041869149284"
"transport routes "	"FunCat"	"17"	"0.000766981362112469"	"3"	"0.0543715006785892"
"chlorophyll binding"	"TAIR-GO"	"16"	"0.01342589799542"	"2"	"0.103800830035987"
"magnesium chelatase complex"	"TAIR-GO"	"16"	"0"	"2"	"0"
"photorespiration"	"TAIR-GO"	"16"	"1.07563338999050e-09"	"3"	"0.000291161535345696"
"plastid organization and biogenesis"	"TAIR-GO"	"16"	"2.94058933016981e-12"	"3"	"6.26315414233248e-05"
"protein folding"	"TAIR-GO"	"16"	"0"	"2"	"0"
"response to high light intensity"	"TAIR-GO"	"16"	"2.94058933016981e-12"	"2"	"0.000709582781443448"
"RNA processing"	"TAIR-GO"	"16"	"0"	"3"	"0"
"ascorbate glutathione cycle"	"AraCyc"	"16"	"0.00524789422995069"	"3"	"0.0494824576013024"
"carbon monoxide dehydrogenase pathway"	"AraCyc"	"16"	"0.000481084867717151"	"7"	"0.00249986475382193"
"cysteine biosynthesis II"	"AraCyc"	"16"	"0.000765744741703802"	"6"	"0.00313408810808657"
"de novo biosynthesis of pyrimidine ribonucleotides"	"AraCyc"	"16"	"0.00374112638322203"	"3"	"0.130435201986970"
"metabolism of energy reserves (e.g. glycogen, trehalose)"	"FunCat"	"16"	"0"	"3"	"0"
"nucleotide metabolism"	"FunCat"	"16"	"0"	"4"	"0"
"translation"	"FunCat"	"16"	"0.000413282885543032"	"4"	"0.0199948395387699"
"Toc apparatus"	"BioPath"	"15"	"0.00609386005856377"	"2"	"0.130277328085074"
"photosynthetic electron transport in photosystem I"	"TAIR-GO"	"15"	"2.12451867286317e-11"	"2"	"0.000709582781443448"
"protein-chloroplast targeting"	"TAIR-GO"	"15"	"7.2855410228847e-08"	"2"	"0.006189348950741"
"histidine biosynthesis"	"AraCyc"	"15"	"0.00353955654835999"	"2"	"0.169670940678489"
"histidine biosynthesis I"	"AraCyc"	"15"	"0.00103434471443821"	"2"	"0.147135600101516"
"ribose degradation"	"AraCyc"	"15"	"6.92118533678245e-08"	"6"	"2.43116295949310e-05"
"Histidine metabolism"	"KEGG"	"15"	"0.000992741859917444"	"2"	"0.138357467079409"
"Oxygen-evolving enhancer protein"	"BioPath"	"14"	"7.00545022381906e-06"	"2"	"0.013451807770522"
"glucose and glucose-1-phosphate degradation"	"AraCyc"	"14"	"0.000132305046342929"	"2"	"0.105475704324642"
"Streptomycin biosynthesis"	"KEGG"	"14"	"0.00116192369953218"	"2"	"0.0551192617758473"
"amylopectin biosynthesis"	"TAIR-GO"	"13"	"1.46631151190256e-12"	"2"	"0.000709582781443448"
"pectin biosynthesis"	"TAIR-GO"	"13"	"1.46631151190256e-12"	"2"	"0.000709582781443448"
"phosphate transport"	"TAIR-GO"	"13"	"9.40112992964355e-09"	"2"	"0.00265043650150382"
"starch degradation"	"AraCyc"	"13"	"0.0194141207015932"	"3"	"0.0398546829886052"
"chloroplast transport "	"FunCat"	"13"	"0.000395595955330833"	"2"	"0.0426289897309013"
"protein targeting, sorting and translocation"	"FunCat"	"13"	"5.08820860603544e-05"	"2"	"0.0317248577831170"
"Membrane Transport"	"KEGG"	"13"	"0.00699519344816986"	"2"	"0.189816674138218"
"Other ion-coupled transporters"	"KEGG"	"13"	"9.5436888055195e-05"	"2"	"0.0446052280302561"
"Plastoquinone biosynthesis"	"BioPath"	"12"	"0"	"2"	"0"
"glycine decarboxylation via glycine cleavage system"	"TAIR-GO"	"12"	"0"	"2"	"0"
"plastid large ribosomal subunit"	"TAIR-GO"	"12"	"0"	"2"	"0"
"lysine biosynthesis I"	"AraCyc"	"12"	"0.0314052405382549"	"4"	"0.0144186689439462"
"pyridoxal 5'-phosphate biosynthesis"	"AraCyc"	"12"	"2.80073324907067e-08"	"2"	"0.00633165674320903"
"electron / hydrogen transport "	"FunCat"	"12"	"6.40339425047749e-06"	"2"	"0.00909236233906297"
"protein modification "	"FunCat"	"12"	"0.00258742059906330"	"2"	"0.138623187091211"
"superpathway of gluconate degradation"	"AraCyc"	"11"	"9.19135282351772e-05"	"6"	"0.000254983033446209"
"FtsH protease (many homologues / subcellular localization ambiguous)"	"BioPath"	"10"	"0"	"1"	"0"
"Plastocyanin"	"BioPath"	"10"	"8.60962763713585e-06"	"1"	"0.0138016730645483"
"Regulatory enzymes"	"BioPath"	"10"	"0.000817192435668044"	"1"	"0.0381759485143922"
"biotin binding"	"TAIR-GO"	"10"	"2.86870043858636e-07"	"1"	"0.00799707950810691"
"cell death"	"TAIR-GO"	"10"	"0.000706353772420304"	"1"	"0.0424937094213638"
"chaperone cofactor dependent protein folding"	"TAIR-GO"	"10"	"0"	"1"	"0"
"chlorophyll catabolism"	"TAIR-GO"	"10"	"3.93318966599194e-05"	"1"	"0.0225720729614338"
"cysteine biosynthesis"	"TAIR-GO"	"10"	"3.93318966599194e-05"	"1"	"0.0225720729614338"
"cytochrome b6f complex assembly"	"TAIR-GO"	"10"	"0"	"1"	"0"
"glucose metabolism"	"TAIR-GO"	"10"	"0.00110281115011663"	"1"	"0.0666966164017791"
"hypersensitive response"	"TAIR-GO"	"10"	"0.00666520163836387"	"1"	"0.0942617249647648"
"isoprenoid biosynthesis"	"TAIR-GO"	"10"	"0.00488022848286604"	"1"	"0.0666966164017791"
"lipid metabolism"	"TAIR-GO"	"10"	"3.93318966599194e-05"	"1"	"0.0225720729614338"
"lipoic acid metabolism"	"TAIR-GO"	"10"	"0"	"1"	"0"
"pentose-phosphate shunt, oxidative branch"	"TAIR-GO"	"10"	"0.00110281115011663"	"1"	"0.0666966164017791"
"phospholipid metabolism"	"TAIR-GO"	"10"	"2.86870043858636e-07"	"1"	"0.00799707950810691"
"photosynthesis light harvesting"	"TAIR-GO"	"10"	"0.0151696204954973"	"1"	"0.156431051018192"
"photosynthesis, dark reaction"	"TAIR-GO"	"10"	"0"	"1"	"0"
"photosynthetic electron transport in cytochrome b6/f"	"TAIR-GO"	"10"	"1.04688023222706e-09"	"1"	"0.00799707950810691"
"photosystem II (sensu Viridiplantae)"	"TAIR-GO"	"10"	"5.59389327806764e-05"	"1"	"0.0424937094213638"
"phytochromobilin biosynthesis"	"TAIR-GO"	"10"	"3.93318966599194e-05"	"1"	"0.0225720729614338"
"plastoquinone biosynthesis"	"TAIR-GO"	"10"	"2.86870043858636e-07"	"1"	"0.00799707950810691"
"protein binding"	"TAIR-GO"	"10"	"0.000107671101375842"	"1"	"0.0666966164017791"
"protein complex assembly"	"TAIR-GO"	"10"	"0"	"1"	"0"
"RNA binding"	"TAIR-GO"	"10"	"0"	"1"	"0"
"systemic acquired resistance"	"TAIR-GO"	"10"	"0.00202600205958343"	"1"	"0.12439882577282"
"thylakoid membrane organization and biogenesis"	"TAIR-GO"	"10"	"0"	"1"	"0"
"vitamin E biosynthesis"	"TAIR-GO"	"10"	"0.000706353772420304"	"1"	"0.0424937094213638"
"xanthophyll cycle"	"TAIR-GO"	"10"	"0"	"1"	"0"
"xanthophyll metabolism"	"TAIR-GO"	"10"	"0"	"1"	"0"
"arginine degradation V"	"AraCyc"	"10"	"0.0210395820129508"	"2"	"0.0866957190410706"
"glutamate degradation I"	"AraCyc"	"10"	"0.00338127814332372"	"2"	"0.0288748869137319"
"phospholipid desaturation pathway"	"AraCyc"	"10"	"0.00472413234877169"	"1"	"0.0674858066334252"
"plastoquinone biosynthesis"	"AraCyc"	"10"	"1.76695378610908e-05"	"1"	"0.0430241466773388"
"thiamine biosynthesis"	"AraCyc"	"10"	"3.78571015759396e-05"	"1"	"0.0953179987223777"
"triacylglycerol biosynthesis"	"AraCyc"	"10"	"0.00645579489897125"	"1"	"0.0953179987223777"
"vitamin E biosynthesis"	"AraCyc"	"10"	"0.0147190431816232"	"1"	"0.125717705295985"
"xanthophyll cycle"	"AraCyc"	"10"	"6.20250473604378e-08"	"1"	"0.00810787615802604"
"electron transport and membrane-associated energy conservation "	"FunCat"	"10"	"0.00238530182868613"	"1"	"0.165107290703456"
"fatty acid biosynthesis"	"FunCat"	"10"	"3.97264382068975e-11"	"1"	"0.00672550106425285"
"lipid, fatty acid and isoprenoid metabolism of energy reserves (e.g. glycogen, trehalose)"	"FunCat"	"10"	"0"	"1"	"0"
"1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradatio"	"KEGG"	"10"	"0.00315763439125548"	"1"	"0.123378984542469"
"1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation"	"KEGG"	"10"	"0.000380265853872062"	"1"	"0.0588804031127911"
"Androgen and estrogen metabolism"	"KEGG"	"10"	"0.000573850693721945"	"1"	"0.0787638650857325"
"Benzoate degradation via hydroxylation"	"KEGG"	"10"	"0.0300602298344408"	"1"	"0.147487803607629"
"Lysine biosynthesis"	"KEGG"	"10"	"0.00707068297639945"	"3"	"0.00699003171145157"
"Tetracycline biosynthesis"	"KEGG"	"10"	"5.26960816856996e-05"	"1"	"0.0258192316346161"
"chlorophyll a biosynthesis"	"LitPath"	"10"	"0"	"1"	"0"
"chlorophyll catabolism"	"LitPath"	"10"	"0.000197172179805905"	"1"	"0.0261943691515463"
"phytol biosynthesis"	"LitPath"	"10"	"0"	"1"	"0"
"plastochinone and phylloquinone biosynthesis"	"LitPath"	"10"	"0.000685328824872021"	"4"	"0.0021794533494249"
"carbohydrate biosynthesis"	"TAIR-GO"	"9"	"0"	"1"	"0"
"histidine biosynthesis"	"TAIR-GO"	"9"	"3.68855062196605e-05"	"1"	"0.0225720729614338"
"sucrose biosynthesis"	"TAIR-GO"	"9"	"0"	"1"	"0"
"carotenoid degradation"	"LitPath"	"9"	"2.38459774190898e-10"	"1"	"0.00931875350267833"
"ClpP protease complex "	"BioPath"	"8"	"0.0351634692214918"	"2"	"0.079010413305075"
"Tic apparatus"	"BioPath"	"8"	"0.0167612550344457"	"2"	"0.0575477426584292"
"amino acid biosynthesis"	"TAIR-GO"	"8"	"0.00432064396298578"	"2"	"0.0283021500367051"
"aspartate family amino acid biosynthesis"	"TAIR-GO"	"8"	"5.87072337442035e-07"	"2"	"0.000709582781443448"
"ATP-dependent proteolysis"	"TAIR-GO"	"8"	"0.0362739902188736"	"2"	"0.068294992364403"
"chloroplastic endopeptidase Clp complex"	"TAIR-GO"	"8"	"0.0006189302737503"	"2"	"0.0189189729446266"
"photosystem I (sensu Viridiplantae)"	"TAIR-GO"	"8"	"0"	"1"	"0"
"PSII associated light-harvesting complex II"	"TAIR-GO"	"8"	"2.82913610323828e-06"	"1"	"0.00799707950810691"
"regulation of transcription"	"TAIR-GO"	"8"	"4.49595211565909e-10"	"1"	"0"
"cyclopropane fatty acid (CFA) biosynthesis"	"AraCyc"	"8"	"2.73163262822594e-06"	"2"	"0.0118214224555203"
"homoserine biosynthesis"	"AraCyc"	"8"	"0.00419666808998577"	"2"	"0.0193187322883608"
"aminoacyl-tRNA-synthetases"	"FunCat"	"8"	"0.0356266096134237"	"4"	"0.0126509105628650"
"C-compound and carbohydrate transport "	"FunCat"	"8"	"5.71489282967349e-07"	"2"	"0.0020605662542472"
"secondary biosynthesis of derivatives of homoisopentenyl pyrophosphate "	"FunCat"	"8"	"0"	"1"	"0"
"One carbon pool by folate"	"KEGG"	"8"	"0.0423150863975393"	"2"	"0.0666962771430932"
"Other translation factors"	"KEGG"	"8"	"0.0287884121388150"	"2"	"0.138357467079409"
"Replication complex"	"KEGG"	"8"	"0.0039923506195689"	"2"	"0.035201428950555"
"Ubiquinone biosynthesis"	"KEGG"	"8"	"0.00644928476566409"	"3"	"0.00492311983189326"
"proton gradient regulation"	"BioPath"	"7"	"0"	"1"	"0"
"fatty acid desaturation"	"TAIR-GO"	"7"	"0.00128254431601733"	"1"	"0.0225720729614338"
"photomorphogenesis"	"TAIR-GO"	"7"	"9.2944713607093e-05"	"1"	"0.0225720729614338"
"HORMONE DATA SET"	"quantDE"	"0.7135993"	"maxDE"	"1.8632069"	"HORMONE DATA SET"
"biogenesis of chloroplast"	"FunCat"	"67"	"1.28767705132454e-32"	"10"	"4.45060629676331e-07"
"C-compound and carbohydrate metabolism"	"FunCat"	"65"	"9.80719947628429e-06"	"11"	"0.0508788184027821"
"photosynthesis"	"FunCat"	"65"	"1.52677299514094e-41"	"10"	"1.19084193391459e-08"
"Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone)"	"BioPath"	"58"	"5.35489223156385e-12"	"8"	"0.000478753234428793"
"glycolysis and gluconeogenesis"	"FunCat"	"49"	"1.14402469139241e-10"	"8"	"0.00405900420377498"
"Intermediary Carbon Metabolism"	"BioPath"	"48"	"8.79342552054854e-05"	"7"	"0.0772585893528309"
"Carbon fixation"	"KEGG"	"44"	"4.31824582680697e-15"	"7"	"0.000161859017392313"
"Glycolysis / Gluconeogenesis"	"KEGG"	"44"	"5.6886313279577e-13"	"6"	"0.00261532945654258"
"Folding, Sorting and Degradation"	"KEGG"	"40"	"2.07477728998379e-07"	"5"	"0.0472241905810597"
"Leaf Glycerolipid Biosynthesis in Plastid"	"BioPath"	"37"	"5.72078263339388e-09"	"4"	"0.0221919181114687"
"glycosylglyceride desaturation pathway"	"AraCyc"	"37"	"0"	"4"	"0"
"Synthesis of membrane lipids in plastids"	"AcylLipid"	"37"	"1.41286854161584e-37"	"4"	"4.31707103066626e-08"
"gluconeogenesis"	"AraCyc"	"34"	"3.99879036263106e-11"	"5"	"0.00865076688806307"
"Protein folding / chaperonins (chloroplast)"	"BioPath"	"30"	"9.06550531349137e-25"	"3"	"0.000501549903470964"
"Calvin cycle"	"AraCyc"	"30"	"2.11119992385842e-11"	"7"	"0.000102116358199549"
"phospholipid desaturation pathway"	"AraCyc"	"30"	"3.17079518260032e-30"	"3"	"1.23461414159894e-05"
"1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradatio"	"KEGG"	"30"	"8.06084434425674e-32"	"3"	"3.98170049419447e-05"
"1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation"	"KEGG"	"30"	"1.07978963083477e-36"	"3"	"5.01924093334011e-06"
"Androgen and estrogen metabolism"	"KEGG"	"30"	"1.00180317943231e-35"	"3"	"1.14901814821059e-05"
"Benzoate degradation via hydroxylation"	"KEGG"	"30"	"1.5121139203001e-26"	"3"	"6.51095281680426e-05"
"Carotenoid and abscisic acid metabolism"	"LitPath"	"29"	"6.71368178574583e-17"	"4"	"0.000196989243835562"
"Glycine, serine and threonine metabolism"	"KEGG"	"28"	"1.00687923842421e-11"	"5"	"0.000205872391313139"
"Chlorophyll biosynthesis and breakdown"	"BioPath"	"26"	"5.8715750640536e-07"	"3"	"0.0135731988051538"
"protein folding"	"TAIR-GO"	"26"	"0"	"3"	"0"
"Porphyrin and chlorophyll metabolism"	"KEGG"	"26"	"3.09343209605381e-10"	"3"	"0.00394345644436077"
"chlorophyll and phytochromobilin metabolism"	"LitPath"	"26"	"4.1679035265432e-08"	"3"	"0.0129244633727189"
"additional photosystem II components"	"BioPath"	"24"	"8.99214113399056e-06"	"3"	"0.0239809397755182"
"acetate fermentation"	"AraCyc"	"24"	"0.000476114636344821"	"5"	"0.0547046951069891"
"biosynthesis of proto- and siroheme"	"AraCyc"	"24"	"2.53857245639687e-06"	"4"	"0.0232157390113746"
"fructose degradation (anaerobic)"	"AraCyc"	"24"	"0.000195802970133139"	"5"	"0.039954599758565"
"glycolysis IV"	"AraCyc"	"24"	"0.000219939956874115"	"5"	"0.0426747116008069"
"sorbitol fermentation"	"AraCyc"	"24"	"0.000528658177566867"	"5"	"0.0484581912896673"
"chlorophyll biosynthesis"	"AraCyc"	"22"	"0.00110108107479003"	"3"	"0.155976997361383"
"glycerol degradation II"	"AraCyc"	"22"	"1.67436989574029e-05"	"4"	"0.0333003363387046"
"photorespiration"	"AraCyc"	"22"	"4.91003113865264e-09"	"6"	"0.000325833487657284"
"Carotenoid biosynthesis"	"BioPath"	"20"	"4.53068995221064e-12"	"3"	"0.000176563358042703"
"mRNA processing in chloroplast"	"BioPath"	"20"	"9.94059160011001e-17"	"4"	"1.14710959328256e-05"
"Pathway for nuclear-encoded, thylakoid-localized proteins"	"BioPath"	"20"	"1.60704199593142e-11"	"2"	"0.00526027015022139"
"Thylakoid biogenesis and photosystem assembly"	"BioPath"	"20"	"4.06700768116622e-15"	"2"	"0.000728997688996367"
"Protein export"	"KEGG"	"20"	"2.41157133007701e-09"	"2"	"0.03340449839377"
"carotenid biosynthesis"	"LitPath"	"20"	"2.87126134343551e-13"	"3"	"0.000159260702500953"
"carotenoid biosynthesis"	"AraCyc"	"18"	"9.92354328556362e-09"	"2"	"0.00626352277097192"
"glyceraldehyde 3-phosphate degradation"	"AraCyc"	"18"	"1.28671379573122e-07"	"3"	"0.0123757101131830"
"glycine degradation I"	"AraCyc"	"18"	"3.60463992322051e-17"	"4"	"1.10753198716708e-05"
"biosynthesis of vitamins, cofactors, and prosthetic groups"	"FunCat"	"18"	"1.68694185141854e-12"	"2"	"0.0057374005437399"
"Biosynthesis of steroids"	"KEGG"	"18"	"0.0205411497598455"	"2"	"0.103238002476910"
"Pentose phosphate pathway"	"KEGG"	"18"	"2.64718304420734e-05"	"3"	"0.0175051633960036"
"carotenoid biosynthesis"	"TAIR-GO"	"17"	"8.50786053686251e-13"	"2"	"0.00100011176592265"
"photoinhibition"	"TAIR-GO"	"17"	"9.69601849397893e-22"	"2"	"1.97049835545492e-05"
"Early light-inducible proteins"	"BioPath"	"16"	"2.87766320079512e-13"	"2"	"0.000728997688996367"
"chloroplast organization and biogenesis"	"TAIR-GO"	"16"	"1.46078702617178e-19"	"3"	"7.38017308761642e-06"
"glycine biosynthesis I"	"AraCyc"	"16"	"0.000161941345984564"	"5"	"0.00691823239938675"
"superpathway of serine and glycine biosynthesis II"	"AraCyc"	"16"	"2.53516766595094e-08"	"5"	"0.000170656902751799"
"Fructose and mannose metabolism"	"KEGG"	"16"	"0.0047271604677175"	"2"	"0.103238002476910"
"Protein folding and associated processing"	"KEGG"	"16"	"5.20084735224105e-07"	"2"	"0.0250590678910659"
"Alanine and aspartate metabolism"	"KEGG"	"15"	"0.000212507068418362"	"3"	"0.00655785174854055"
"plastid organization and biogenesis"	"TAIR-GO"	"14"	"6.30202054297307e-17"	"2"	"7.72817390733772e-05"
"RNA processing"	"TAIR-GO"	"14"	"0"	"2"	"0"
"dTDP-rhamnose biosynthesis"	"AraCyc"	"14"	"0.00724204347892378"	"4"	"0.0279692360295360"
"galactose degradation I"	"AraCyc"	"13"	"1.4535522245685e-12"	"3"	"8.10754397129824e-05"
"glucose conversion"	"AraCyc"	"13"	"0.0081171358682719"	"3"	"0.0755925510797641"
"lactose degradation IV"	"AraCyc"	"13"	"1.4535522245685e-12"	"3"	"8.10754397129824e-05"
"UDP-glucose conversion"	"AraCyc"	"13"	"0.00651880517197243"	"3"	"0.0701382429104716"
"transport "	"FunCat"	"12.5"	"1.42695437740655e-16"	"2"	"1.96065958089019e-05"
"starch metabolism"	"BioPath"	"12"	"0.00894082201346676"	"2"	"0.0527594542734156"
"glycine decarboxylation via glycine cleavage system"	"TAIR-GO"	"12"	"0"	"2"	"0"
"formylTHF biosynthesis"	"AraCyc"	"12"	"7.21630861687841e-05"	"2"	"0.0336296419142396"
"tRNA charging pathway"	"AraCyc"	"12"	"0.00441682617592884"	"5"	"0.0106746234362242"
"Aminoacyl-tRNA biosynthesis"	"KEGG"	"12"	"0.000138210363074390"	"5"	"0.000430242551560645"
"Delta-pH pathway"	"BioPath"	"10"	"1.04596546839404e-10"	"1"	"0.00238699593957238"
"SRP (signal recognition particle)-dependent pathway for integral membrane proteins"	"BioPath"	"10"	"2.32693919906800e-06"	"1"	"0.0112834489373921"
"calmodulin binding"	"TAIR-GO"	"10"	"1.33842481774923e-05"	"1"	"0.0477261273563865"
"cell death"	"TAIR-GO"	"10"	"1.62241087347156e-08"	"1"	"0.0043025297979166"
"chaperone cofactor dependent protein folding"	"TAIR-GO"	"10"	"0"	"1"	"0"
"embryonic development"	"TAIR-GO"	"10"	"0.00345313625229072"	"1"	"0.0942781995315405"
"fatty acid biosynthesis"	"TAIR-GO"	"10"	"0.00124679304016279"	"1"	"0.0620448502561249"
"isoprenoid biosynthesis"	"TAIR-GO"	"10"	"2.00105013563624e-07"	"1"	"0.00704459141037672"
"photosystem I"	"TAIR-GO"	"10"	"1.27756399354168e-07"	"1"	"0.0142786102730552"
"photosystem II"	"TAIR-GO"	"10"	"4.69795631373522e-09"	"1"	"0.00704459141037672"
"photosystem II (sensu Viridiplantae)"	"TAIR-GO"	"10"	"7.57987054769371e-10"	"1"	"0.0043025297979166"
"protein binding"	"TAIR-GO"	"10"	"1.6412719487587e-09"	"1"	"0.00704459141037672"
"protein complex assembly"	"TAIR-GO"	"10"	"0"	"1"	"0"
"response to light"	"TAIR-GO"	"10"	"0.0229032999114104"	"1"	"0.270823731741337"
"response to temperature"	"TAIR-GO"	"10"	"3.26943246663373e-10"	"1"	"0.00218990576849499"
"RNA binding"	"TAIR-GO"	"10"	"0"	"1"	"0"
"systemic acquired resistance"	"TAIR-GO"	"10"	"6.22351568880263e-08"	"1"	"0.0142786102730552"
"thylakoid membrane organization and biogenesis"	"TAIR-GO"	"10"	"0"	"1"	"0"
"xanthophyll cycle"	"TAIR-GO"	"10"	"0"	"1"	"0"
"xanthophyll metabolism"	"TAIR-GO"	"10"	"0"	"1"	"0"
"cysteine biosynthesis II"	"AraCyc"	"10"	"0.000590435082060979"	"4"	"0.00186706302906091"
"glucose and glucose-1-phosphate degradation"	"AraCyc"	"10"	"2.54420423935996e-05"	"1"	"0.0942094345869553"
"isopentenyl diphosphate biosynthesis -- mevalonate-independent"	"AraCyc"	"10"	"1.75901181358217e-06"	"1"	"0.0217778360470382"
"peptidoglycan biosynthesis"	"AraCyc"	"10"	"1.36260909541723e-07"	"1"	"0.0385520889024356"
"serine biosynthesis"	"AraCyc"	"10"	"1.88651357702267e-07"	"4"	"1.97213039116637e-06"
"starch biosynthesis"	"AraCyc"	"10"	"0"	"1"	"0"
"sucrose biosynthesis"	"AraCyc"	"10"	"0.00756729867850214"	"1"	"0.191785791589395"
"sucrose degradation III"	"AraCyc"	"10"	"0.000730254085800669"	"1"	"0.134131832668145"
"trehalose biosynthesis III"	"AraCyc"	"10"	"0.0420029523628956"	"1"	"0.372187443011974"
"UDP-N-acetylglucosamine biosynthesis"	"AraCyc"	"10"	"3.55151987537562e-06"	"1"	"0.0296897388434031"
"xanthophyll cycle"	"AraCyc"	"10"	"2.03102015419898e-11"	"1"	"0.00161605454836545"
"aminoacyl-tRNA-synthetases"	"FunCat"	"10"	"2.6648672826933e-07"	"4"	"8.69621935525471e-05"
"C-compound, carbohydrate anabolism"	"FunCat"	"10"	"6.43119201877628e-05"	"1"	"0.0932148163373419"
"chloroplast transport "	"FunCat"	"10"	"8.99027186872239e-07"	"1"	"0.0287086691307717"
"transport routes "	"FunCat"	"10"	"7.16139938897814e-05"	"1"	"0.0848599687057817"
"metabolism of acyl-lipids in mitochondria"	"AcylLipid"	"10"	"0.000143119042158685"	"1"	"0.0201352660590091"
"chlorophyll a biosynthesis"	"LitPath"	"10"	"0"	"1"	"0"
"IPP (isopentenyl diphosphate) and DMAPP (dimethylallyl diphosphat) biosynthesis"	"LitPath"	"10"	"0.00774490371338337"	"1"	"0.114059210075620"
"MEP (methylerythritol P) pathway, plastids"	"LitPath"	"10"	"4.66796943514192e-06"	"1"	"0.0262308609251354"
"phytochromobilin biosynthesis"	"LitPath"	"10"	"2.92376817855227e-06"	"1"	"0.0158547823441880"
"carbohydrate biosynthesis"	"TAIR-GO"	"9"	"0"	"1"	"0"
"starch biosynthesis"	"TAIR-GO"	"9"	"2.46836687824448e-05"	"1"	"0.0142786102730552"
"sucrose biosynthesis"	"TAIR-GO"	"9"	"0"	"1"	"0"
"asparagine biosynthesis I"	"AraCyc"	"9"	"7.23920827933836e-05"	"1"	"0.0296897388434031"
"asparagine degradation I"	"AraCyc"	"9"	"0.00436662786725853"	"1"	"0.12042464802985"
"aspartate biosynthesis and degradation"	"AraCyc"	"9"	"1.04910611795081e-05"	"1"	"0.0217778360470382"
"aspartate degradation II"	"AraCyc"	"9"	"0.0099220722860232"	"1"	"0.134131832668145"
"glutamine degradation III"	"AraCyc"	"9"	"0.000100501146270531"	"1"	"0.058779581331827"
"Alkaloid biosynthesis I"	"KEGG"	"9"	"0.0150270936061746"	"1"	"0.101086113699816"
"Novobiocin biosynthesis"	"KEGG"	"9"	"0.000203292126266401"	"1"	"0.0393369610688401"
"carotenoid degradation"	"LitPath"	"9"	"5.56504064931615e-16"	"1"	"0.000825437373197614"
"Chloroplastic protein import via envelope membrane"	"BioPath"	"8"	"0.00530821322335341"	"2"	"0.0157521657278915"
"Tic apparatus"	"BioPath"	"8"	"7.83643470756402e-07"	"2"	"0.00114239698931160"
"Translation (chloroplast)"	"BioPath"	"8"	"1.37722439406936e-05"	"2"	"0.000728997688996367"
"regulation of transcription"	"TAIR-GO"	"8"	"1.79205757778358e-14"	"1"	"0"
"biosynthesis of derivatives of homoisopentenyl pyrophosphate "	"FunCat"	"8"	"0.00510530987203925"	"1"	"0.061357928063082"
"secondary biosynthesis of derivatives of homoisopentenyl pyrophosphate "	"FunCat"	"8"	"0"	"1"	"0"
"stress response"	"FunCat"	"8"	"0"	"1"	"0"
"One carbon pool by folate"	"KEGG"	"8"	"0.000141723160027220"	"2"	"0.00434229394535667"
"fatty acid desaturation"	"TAIR-GO"	"7"	"4.2047719956261e-07"	"1"	"0.00218990576849499"
"gibberellic acid biosynthesis"	"TAIR-GO"	"7"	"0.0102762819965203"	"1"	"0.0348523051716146"
"photomorphogenesis"	"TAIR-GO"	"7"	"2.0463563455004e-08"	"1"	"0.00218990576849499"
"mRNA synthesis "	"FunCat"	"7"	"0.0307943138736506"	"1"	"0.166816426276810"
"RNA synthesis "	"FunCat"	"7"	"0.0307943138736506"	"1"	"0.166816426276810"
"transcription"	"FunCat"	"7"	"0.000260907419929126"	"1"	"0.0541144472339519"
"transcriptional control"	"FunCat"	"7"	"0.00162638577800545"	"1"	"0.0406487221643993"
"MUTANT DATA SET"	"quantDE"	"0.8526662"	"maxDE"	"3.003205399"	"MUTANT DATA SET"
"Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone)"	"BioPath"	"232"	"4.55394747739395e-39"	"29"	"4.12331155396407e-08"
"C-compound and carbohydrate metabolism"	"FunCat"	"203"	"3.54658928622093e-07"	"35"	"0.0213956810502261"
"biogenesis of chloroplast"	"FunCat"	"191"	"4.72892499399226e-78"	"29"	"2.13967377532835e-15"
"Photosystems "	"BioPath"	"178"	"2.34864534963951e-13"	"24"	"0.00167454705772491"
"Intermediary Carbon Metabolism"	"BioPath"	"150"	"0.00998910871628108"	"27"	"0.0458829296756297"
"photosynthesis"	"FunCat"	"127"	"3.74477226764955e-50"	"19"	"7.55954551187895e-10"
"Carbon fixation"	"KEGG"	"118"	"1.42560089488976e-25"	"19"	"1.70408440254669e-06"
"Chlorophyll biosynthesis and breakdown"	"BioPath"	"107"	"9.11174574701049e-23"	"13"	"2.43583454273502e-05"
"chlorophyll and phytochromobilin metabolism"	"LitPath"	"101"	"7.84715588301311e-23"	"12"	"1.99433615421697e-05"
"glycolysis and gluconeogenesis"	"FunCat"	"99"	"0.000145061447709531"	"18"	"0.0178389947295429"
"amino acid metabolism"	"FunCat"	"97"	"0.0111973804295776"	"12"	"0.206411794939882"
"Porphyrin and chlorophyll metabolism"	"KEGG"	"97"	"3.73994658233183e-37"	"12"	"3.36104008967072e-07"
"Biosynthesis of steroids"	"KEGG"	"95"	"2.43082289646231e-14"	"10"	"0.00380243921449298"
"chlorophyll biosynthesis"	"AraCyc"	"90"	"4.53205940017662e-19"	"12"	"0.00516631023509919"
"chlorophyll biosynthesis"	"TAIR-GO"	"85"	"3.52362512300082e-41"	"9"	"5.74119509262897e-07"
"transport "	"FunCat"	"83"	"0"	"14"	"0"
"Folding, Sorting and Degradation"	"KEGG"	"80"	"0.0235780316688186"	"12"	"0.241409509092672"
"additional photosystem II components"	"BioPath"	"78"	"1.63648887635889e-08"	"11"	"0.00281765440734377"
"Leaf Glycerolipid Biosynthesis in Plastid"	"BioPath"	"78"	"0.00615061762887018"	"9"	"0.198847410331045"
"Glycolysis / Gluconeogenesis"	"KEGG"	"74"	"0.000259295456584123"	"13"	"0.0153508099248678"
"fatty acid biosynthesis"	"TAIR-GO"	"72"	"7.54309181104734e-32"	"8"	"1.85694640111613e-05"
"triterpene, sterol, and brassinosteroid metabolism"	"LitPath"	"70"	"0.0154505268310048"	"7"	"0.514747083318386"
"Biosynthesis of prenyl diphosphates"	"BioPath"	"65"	"0.00895844633296801"	"8"	"0.108677758620082"
"photorespiration"	"AraCyc"	"62"	"4.76165923082475e-23"	"12"	"5.38085970706581e-05"
"Pyruvate metabolism"	"KEGG"	"62"	"0.0363790555407797"	"10"	"0.087541825877434"
"sterol biosynthesis"	"BioPath"	"60"	"1.96641988956897e-07"	"6"	"0.0430963210065274"
"Calvin cycle"	"AraCyc"	"60"	"2.54579708957181e-13"	"11"	"0.000814133228164258"
"gluconeogenesis"	"AraCyc"	"60"	"1.74260594987874e-08"	"10"	"0.0116490877917116"
"Glutamate metabolism"	"KEGG"	"60"	"9.1233366445591e-06"	"7"	"0.0529830585400112"
"chlorophyll biosynthesis"	"LitPath"	"59"	"4.65103495030003e-31"	"6"	"6.12058719060552e-06"
"glycolysis IV"	"AraCyc"	"56"	"0.000118366882688393"	"12"	"0.0293580580692661"
"Selenoamino acid metabolism"	"KEGG"	"56"	"1.85798649382299e-09"	"7"	"0.00652087910490682"
"Synthesis of fatty acids in plastids"	"AcylLipid"	"56"	"8.7216306130935e-15"	"8"	"0.000560638100367774"
"Cysteine metabolism"	"KEGG"	"54"	"7.59299522637495e-12"	"7"	"0.00320972698745486"
"Nitrogen metabolism"	"KEGG"	"53"	"2.69139135854429e-05"	"7"	"0.00985626955941918"
"Methionin/SAM/ethylene metabolism from cysteine and aspartate"	"BioPath"	"52"	"1.01448023513051e-05"	"7"	"0.0331905081362298"
"Pathway for nuclear-encoded, thylakoid-localized proteins"	"BioPath"	"52"	"2.54598797722321e-18"	"7"	"5.39808402752175e-05"
"acetate fermentation"	"AraCyc"	"52"	"0.00382787831517344"	"12"	"0.0457434910513402"
"Protein folding and associated processing"	"KEGG"	"52"	"2.93635027222065e-17"	"8"	"0.000505355906977034"
"Carotenoid and abscisic acid metabolism"	"LitPath"	"52"	"9.6869733124851e-11"	"6"	"0.00619905902665859"
"lipid, fatty acid and isoprenoid metabolism"	"FunCat"	"51"	"1.98519916000585e-05"	"7"	"0.0424458774072708"
"sterol biosynthesis"	"TAIR-GO"	"50"	"3.84386893638414e-09"	"5"	"0.0324787779868705"
"fructose degradation (anaerobic)"	"AraCyc"	"50"	"0.00294602215773388"	"11"	"0.0549693753986261"
"sorbitol fermentation"	"AraCyc"	"50"	"0.0109483940307188"	"11"	"0.073928953061597"
"Photosynthesis"	"KEGG"	"50"	"2.11993894214628e-08"	"8"	"0.00336301265919554"
"brassinosteroid biosynthesis"	"LitPath"	"50"	"8.77867721494715e-08"	"5"	"0.0250171712759320"
"sterol and brassinosteroid biosynthesis"	"LitPath"	"50"	"7.25291500238956e-13"	"5"	"0.0040773231608693"
"Carotenoid biosynthesis"	"BioPath"	"46"	"4.06914865802241e-15"	"5"	"0.0012084446081109"
"carotenoid biosynthesis"	"AraCyc"	"46"	"2.15652098243286e-18"	"5"	"0.000328364579860642"
"carotenid biosynthesis"	"LitPath"	"46"	"7.06660743884475e-17"	"5"	"0.000551553265460083"
"Ascorbate and aldarate metabolism"	"KEGG"	"45"	"8.6543793840334e-08"	"6"	"0.0081119432600107"
"fatty acid biosynthesis -- initial steps"	"AraCyc"	"44"	"3.54257929047804e-07"	"6"	"0.0693618745061674"
"Alanine and aspartate metabolism"	"KEGG"	"44"	"1.67067803989669e-06"	"5"	"0.0752434177452462"
"transport facilitation"	"FunCat"	"43"	"0"	"7"	"0"
"biosynthesis of proto- and siroheme"	"AraCyc"	"42"	"0.00110866166143147"	"8"	"0.0414822739977693"
"Sulfur metabolism"	"KEGG"	"42"	"3.82563750590377e-06"	"5"	"0.0160192464541326"
"IPP (isopentenyl diphosphate) and DMAPP (dimethylallyl diphosphat) biosynthesis"	"LitPath"	"41"	"1.35337288507318e-05"	"5"	"0.0196405677761396"
"ascorbic acid biosynthesis"	"BioPath"	"40"	"1.89293839270028e-06"	"6"	"0.0135011875430531"
"sterol biosynthesis"	"AraCyc"	"40"	"5.26666534917082e-06"	"4"	"0.0729760857565163"
"Methionine metabolism"	"KEGG"	"40"	"6.12142970925324e-09"	"5"	"0.00983646559475468"
"Pentose phosphate pathway"	"KEGG"	"40"	"0.000717021543235533"	"7"	"0.0413756432223284"
"assimilation of ammonia, metabolism of the glutamate group"	"FunCat"	"39"	"6.11093277540199e-07"	"5"	"0.0129695357166716"
"Glycine, serine and threonine metabolism"	"KEGG"	"39"	"0.00122654996815496"	"7"	"0.0200916062667884"
"Chlorophyll a/b binding proteins"	"BioPath"	"38"	"0.000933306761733085"	"5"	"0.0285785800639677"
"Protein folding / chaperonins (chloroplast)"	"BioPath"	"38"	"6.57469175521054e-12"	"6"	"0.000898739954468696"
"glycerol degradation II"	"AraCyc"	"38"	"0.00681669313391429"	"8"	"0.0694739494452727"
"ATP synthesis"	"KEGG"	"38"	"0.00139372223367202"	"7"	"0.0362632670230505"
"Citrate cycle (TCA cycle)"	"KEGG"	"38"	"0.0157855473548498"	"6"	"0.0988928988691484"
"response to light"	"TAIR-GO"	"37"	"0.00638268442392395"	"5"	"0.325607390602409"
"protein biosynthesis"	"TAIR-GO"	"36"	"0"	"6"	"0"
"formylTHF biosynthesis"	"AraCyc"	"36"	"7.12402580563353e-12"	"6"	"0.00272742273831159"
"glycine biosynthesis I"	"AraCyc"	"36"	"4.07573158059779e-05"	"8"	"0.0543092120692891"
"superpathway of serine and glycine biosynthesis II"	"AraCyc"	"36"	"1.77266199154287e-13"	"8"	"0.000434682638631144"
"Fatty acid biosynthesis (path 1)"	"KEGG"	"36"	"5.37887499384927e-10"	"4"	"0.0317476543244808"
"Transcription (chloroplast)"	"BioPath"	"34"	"2.96477576521816e-14"	"4"	"0.000608511458975791"
"embryonic development"	"TAIR-GO"	"34"	"0.000310583352094887"	"4"	"0.0821615335244269"
"growth"	"TAIR-GO"	"34"	"0.0152457081364929"	"4"	"0.179376692589868"
"photorespiration"	"TAIR-GO"	"34"	"0"	"5"	"0"
"transcription initiation"	"TAIR-GO"	"34"	"2.53393949678593e-14"	"4"	"0.00127889501243629"
"unidimensional cell growth"	"TAIR-GO"	"34"	"3.40066896148216e-07"	"4"	"0.0171392150412742"
"ascorbate glutathione cycle"	"AraCyc"	"34"	"4.07500608442287e-09"	"5"	"0.00679580319608847"
"Fatty acid elongation and wax and cutin metabolism"	"AcylLipid"	"33"	"0.00639875741127608"	"5"	"0.184613371034668"
"MEP (methylerythritol P) pathway, plastids"	"LitPath"	"31"	"3.51646625788418e-11"	"4"	"0.00153893688269871"
"light harvesting complex"	"BioPath"	"30"	"1.62465591078296e-14"	"4"	"0.000194628583557971"
"brassinosteroid biosynthesis"	"TAIR-GO"	"30"	"2.54540154157466e-05"	"3"	"0.054738398260987"
"steroid biosynthesis"	"TAIR-GO"	"30"	"2.54540154157466e-05"	"3"	"0.054738398260987"
"formaldehyde assimilation I (serine pathway)"	"AraCyc"	"30"	"0.0112452683615751"	"5"	"0.176290892163071"
"mixed acid fermentation"	"AraCyc"	"30"	"0.0221254264820678"	"6"	"0.102802259856443"
"Cyanoamino acid metabolism"	"KEGG"	"29"	"3.55558335903917e-05"	"4"	"0.0897821664810384"
"Glutamate/glutamine from nitrogen fixation"	"BioPath"	"28"	"0.00208837076174819"	"3"	"0.0773173805573423"
"mRNA processing in chloroplast"	"BioPath"	"28"	"7.36026039408553e-10"	"6"	"0.000262263553045998"
"ATP-dependent proteolysis"	"TAIR-GO"	"28"	"3.23984541174099e-13"	"7"	"7.07212966000943e-06"
"carotene biosynthesis"	"TAIR-GO"	"28"	"0"	"3"	"0"
"carotenoid biosynthesis"	"TAIR-GO"	"28"	"5.27676794354372e-09"	"3"	"0.0116719520685255"
"photosynthesis"	"TAIR-GO"	"28"	"0.0124541098984901"	"3"	"0.242278577306177"
"protein folding"	"TAIR-GO"	"28"	"0"	"4"	"0"
"nitrate assimilation pathway"	"AraCyc"	"28"	"7.52370251158873e-07"	"3"	"0.0211570448521519"
"energy"	"FunCat"	"28"	"0"	"4"	"0"
"nitrogen and sulfur metabolism"	"FunCat"	"28"	"0.00834083028855014"	"3"	"0.125928664813172"
"Protein export"	"KEGG"	"28"	"0.00210364299181533"	"4"	"0.146562475016337"
"Valine, leucine and isoleucine biosynthesis"	"KEGG"	"28"	"0.0469503360273983"	"5"	"0.0752434177452462"
"Synthesis of membrane lipids in plastids"	"AcylLipid"	"28"	"0.000107735107456"	"3"	"0.031521494084416"
"aspartate degradation II"	"AraCyc"	"27"	"4.89074044450304e-05"	"4"	"0.0302275725452046"
"photosystem I"	"TAIR-GO"	"25"	"4.57327106754379e-11"	"3"	"0.00647542354048091"
"Chloroplastic protein turnover"	"BioPath"	"24"	"9.2802116219321e-07"	"6"	"0.000262263553045998"
"ClpP protease complex "	"BioPath"	"24"	"4.7716694743034e-13"	"6"	"1.69808227579231e-05"
"Delta-pH pathway"	"BioPath"	"24"	"0"	"3"	"0"
"chlorophyll binding"	"TAIR-GO"	"24"	"0.00336521375989387"	"3"	"0.0714491463586371"
"isopentenyl diphosphate biosynthesis -- mevalonate-independent"	"AraCyc"	"24"	"8.82687841882483e-12"	"3"	"0.00221068251355419"
"aerobic respiration"	"FunCat"	"24"	"0.000640893000148693"	"4"	"0.0115948707979706"
"respiration"	"FunCat"	"24"	"0.000640893000148693"	"4"	"0.0115948707979706"
"transcription"	"FunCat"	"24"	"4.58344019068623e-10"	"4"	"0.00839174192384127"
"indoleacetic acid biosynthesis"	"TAIR-GO"	"22"	"4.52779363614105e-10"	"3"	"0.00114055964457116"
"porphyrin biosynthesis"	"TAIR-GO"	"22"	"0.00208537998850807"	"4"	"0.0171392150412742"
"glyceraldehyde 3-phosphate degradation"	"AraCyc"	"22"	"0.0107562870707178"	"4"	"0.119122614611756"
"glycine degradation I"	"AraCyc"	"22"	"1.91273826372884e-12"	"5"	"0.000145556244322148"
"isoleucine biosynthesis I"	"AraCyc"	"22"	"5.46373667765545e-06"	"3"	"0.105079057965992"
"leucine biosynthesis"	"AraCyc"	"22"	"5.46373667765545e-06"	"3"	"0.105079057965992"
"starch biosynthesis"	"AraCyc"	"22"	"0"	"3"	"0"
"TCA cycle variation II"	"AraCyc"	"22"	"0.000374639529319337"	"4"	"0.0388664540659844"
"valine biosynthesis"	"AraCyc"	"22"	"5.46373667765545e-06"	"3"	"0.105079057965992"
"Benzoate degradation via hydroxylation"	"KEGG"	"22"	"3.07199336559797e-05"	"3"	"0.0116433708175176"
"chlorophyll and phyochromobilin biosynthesis"	"LitPath"	"22"	"0.00382164395361353"	"4"	"0.0153183414890272"
"transported compounds (substrates)"	"FunCat"	"21"	"0"	"4"	"0"
"Fluorene degradation"	"KEGG"	"21"	"0.00648038715195462"	"3"	"0.0512045409174085"
"ATP synthase components"	"BioPath"	"20"	"0.00150579530702559"	"3"	"0.0311006080492335"
"Cytochrome b6/f complex"	"BioPath"	"20"	"3.36398854382428e-05"	"2"	"0.100758445848315"
"Plastocyanin"	"BioPath"	"20"	"0"	"2"	"0"
"aging"	"TAIR-GO"	"20"	"2.75199477709606e-05"	"2"	"0.0694674888682412"
"chloroplast thylakoid membrane protein import"	"TAIR-GO"	"20"	"1.07246610990079e-09"	"2"	"0.00731771820624641"
"chloroplastic endopeptidase Clp complex"	"TAIR-GO"	"20"	"3.45412767203498e-13"	"5"	"2.47095581845409e-05"
"methionine biosynthesis"	"TAIR-GO"	"20"	"5.32979824470585e-10"	"2"	"0.00731771820624641"
"ammonia assimilation cycle"	"AraCyc"	"20"	"0.000167712901562363"	"2"	"0.0763579334929372"
"glutamine biosynthesis I"	"AraCyc"	"20"	"2.27674746696875e-05"	"2"	"0.0379182140434207"
"homocysteine and cysteine interconversion"	"AraCyc"	"20"	"9.50364885035245e-06"	"2"	"0.100015457196131"
"methionine biosynthesis II"	"AraCyc"	"20"	"0.00119866832378013"	"2"	"0.184458825796708"
"methionine degradation I"	"AraCyc"	"20"	"2.27674746696875e-05"	"3"	"0.0211570448521519"
"phospholipid desaturation pathway"	"AraCyc"	"20"	"4.01670883382441e-07"	"2"	"0.0129435354827259"
"UDP-N-acetylglucosamine biosynthesis"	"AraCyc"	"20"	"1.11116078662984e-07"	"2"	"0.0379182140434207"
"biosynthesis of derivatives of homoisopentenyl pyrophosphate "	"FunCat"	"20"	"0.0101439722256285"	"2"	"0.176791019002662"
"1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradatio"	"KEGG"	"20"	"1.52157637619011e-06"	"2"	"0.0496206079290889"
"1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation"	"KEGG"	"20"	"1.00899907853526e-08"	"2"	"0.0147442344982297"
"Androgen and estrogen metabolism"	"KEGG"	"20"	"2.71436445459013e-08"	"2"	"0.0239557197469348"
"Pantothenate and CoA biosynthesis"	"KEGG"	"20"	"0.0117181544456844"	"2"	"0.309361738616759"
"metabolism of acyl-lipids in mitochondria"	"AcylLipid"	"20"	"0.0221225857693934"	"2"	"0.216969282797975"
"calmodulin binding"	"TAIR-GO"	"19"	"0.00230950624715449"	"2"	"0.222015703913277"
"starch biosynthesis"	"TAIR-GO"	"19"	"0.000398835421666608"	"2"	"0.0477941625683479"
"lactose degradation IV"	"AraCyc"	"19"	"2.28049424309272e-12"	"5"	"1.49066978414097e-05"
"protein degradation "	"FunCat"	"19"	"0.00108339420864139"	"4"	"0.0323998611433476"
"Ferredoxin"	"BioPath"	"18"	"9.99458341101108e-06"	"3"	"0.0207472918704912"
"Sec (secretory) pathway"	"BioPath"	"18"	"6.05414090183412e-15"	"3"	"0.000282089346057849"
"Thylakoid biogenesis and photosystem assembly"	"BioPath"	"18"	"0.00589202047562871"	"2"	"0.0511135291389356"
"Translation (chloroplast)"	"BioPath"	"18"	"9.99458341101108e-06"	"3"	"0.0071363708869978"
"photosynthesis light harvesting"	"TAIR-GO"	"18"	"0.000180326819358966"	"2"	"0.0694674888682412"
"regulation of transcription"	"TAIR-GO"	"18"	"0"	"2"	"0"
"IAA biosynthesis"	"AraCyc"	"18"	"0.0314637772778"	"2"	"0.154448203647079"
"IAA biosynthesis I"	"AraCyc"	"18"	"0.00059897698229575"	"2"	"0.0763579334929372"
"oxidative branch of the pentose phosphate pathway"	"AraCyc"	"18"	"3.01589435472001e-05"	"5"	"0.00197443997609089"
"transport routes "	"FunCat"	"18"	"0.00539504013731815"	"4"	"0.025892627237555"
"Tetracycline biosynthesis"	"KEGG"	"18"	"6.04070471342924e-09"	"2"	"0.00342517505442275"
"photosystem II"	"TAIR-GO"	"17"	"2.28331875232291e-07"	"2"	"0.0165834560487593"
"Membrane Transport"	"KEGG"	"17"	"0.0218419784604484"	"3"	"0.161038582660554"
"Other ion-coupled transporters"	"KEGG"	"17"	"0.000152568208690297"	"3"	"0.0234520211442422"
"Early light-inducible proteins"	"BioPath"	"16"	"0.000895249677329994"	"2"	"0.0511135291389356"
"acetyl-CoA biosynthesis"	"TAIR-GO"	"16"	"3.53623288830648e-06"	"2"	"0.0165834560487593"
"chloroplast organization and biogenesis"	"TAIR-GO"	"16"	"1.04209745660224e-08"	"3"	"0.00308078054111369"
"flower development"	"TAIR-GO"	"16"	"1.81021860180780e-05"	"2"	"0.0165834560487593"
"magnesium chelatase complex"	"TAIR-GO"	"16"	"0"	"2"	"0"
"positive regulation of flower development"	"TAIR-GO"	"16"	"0"	"2"	"0"
"PSII associated light-harvesting complex II"	"TAIR-GO"	"16"	"0"	"2"	"0"
"wax biosynthesis"	"TAIR-GO"	"16"	"0.000827668802989486"	"2"	"0.0477941625683479"
"ascorbate biosynthesis"	"AraCyc"	"16"	"1.93051589436558e-05"	"2"	"0.0763579334929372"
"sucrose degradation III"	"AraCyc"	"16"	"0.0355534158046552"	"2"	"0.28121787115016"
"nucleotide metabolism"	"FunCat"	"16"	"0"	"4"	"0"
"Novobiocin biosynthesis"	"KEGG"	"16"	"0.0139849197481766"	"2"	"0.126500315898891"
"galactose degradation I"	"AraCyc"	"15"	"4.65138398449319e-08"	"4"	"0.000353228651319814"
"psbP family of thylakoid proteins"	"BioPath"	"14"	"2.07884873507580e-07"	"3"	"0.00340616549955665"
"lipid biosynthesis"	"TAIR-GO"	"14"	"0.0022899398021279"	"2"	"0.0165834560487593"
"plastid organization and biogenesis"	"TAIR-GO"	"14"	"2.02272566338282e-07"	"2"	"0.00731771820624641"
"RNA processing"	"TAIR-GO"	"14"	"0"	"2"	"0"
"methionine and S-adenosylmethionine synthesis"	"AraCyc"	"14"	"4.41235009661975e-05"	"2"	"0.0236763884518975"
"non-oxidative branch of the pentose phosphate pathway"	"AraCyc"	"14"	"0.00319872981076244"	"3"	"0.0544127964816502"
"accessory proteins of electron transport and membrane-associated energy conservation"	"FunCat"	"14"	"6.38303939123808e-12"	"2"	"0.000938686865783845"
"electron transport and membrane-associated energy conservation "	"FunCat"	"14"	"0.00015941994094106"	"2"	"0.0503390402684429"
"metabolism of energy reserves (e.g. glycogen, trehalose)"	"FunCat"	"14"	"0"	"2"	"0"
"transcriptional control"	"FunCat"	"14"	"0.0191164233536911"	"2"	"0.105944502773967"
"translation"	"FunCat"	"14"	"0.0301161622898083"	"3"	"0.125928664813172"
"One carbon pool by folate"	"KEGG"	"14"	"0.00663092899841843"	"3"	"0.0405760180014055"
"one-carbon compound metabolism"	"TAIR-GO"	"13"	"2.94197971687142e-06"	"2"	"0.00731771820624641"
"folate biosynthesis"	"AraCyc"	"13"	"0.0183504697523765"	"2"	"0.215826712264662"
"glutamate degradation I"	"AraCyc"	"13"	"0.00264640914372252"	"2"	"0.0555557824955016"
"Plastoquinone biosynthesis"	"BioPath"	"12"	"0"	"2"	"0"
"glycine decarboxylation via glycine cleavage system"	"TAIR-GO"	"12"	"0"	"2"	"0"
"plastid large ribosomal subunit"	"TAIR-GO"	"12"	"0"	"2"	"0"
"serine biosynthesis"	"AraCyc"	"12"	"0.000400542284059874"	"5"	"1.49066978414097e-05"
"detoxification"	"FunCat"	"11"	"0"	"2"	"0"
"electron / hydrogen transport "	"FunCat"	"11"	"0.000424679940253495"	"2"	"0.0149728856664813"
"brassinosteroid biosynthesis"	"BioPath"	"10"	"0.00364391873658259"	"1"	"0.0462726371955859"
"Oxygen-evolving enhancer protein"	"BioPath"	"10"	"0.0105911775920323"	"1"	"0.129195422361764"
"photosystem I subunit precursor"	"BioPath"	"10"	"0.000932621691064337"	"1"	"0.129195422361764"
"Regulatory enzymes"	"BioPath"	"10"	"0.00364391873658259"	"1"	"0.0462726371955859"
"Transcriptional regulators (chloroplast)"	"BioPath"	"10"	"4.97109539706206e-05"	"1"	"0.0168808491971782"
"amino acid biosynthesis"	"TAIR-GO"	"10"	"0.00731432449294396"	"1"	"0.269411967391954"
"ATP synthesis coupled proton transport"	"TAIR-GO"	"10"	"0.0239604183268644"	"1"	"0.123620859465642"
"biotin binding"	"TAIR-GO"	"10"	"1.68356556339615e-05"	"1"	"0.0160336251228772"
"branched chain family amino acid biosynthesis"	"TAIR-GO"	"10"	"8.13496507285215e-08"	"1"	"0.0440618081525677"
"carotenoid biosynthesis/TAS"	"TAIR-GO"	"10"	"0"	"1"	"0"
"chlorophyll catabolism"	"TAIR-GO"	"10"	"0.00145789686544741"	"1"	"0.0440618081525677"
"chloroplast ATP synthase complex"	"TAIR-GO"	"10"	"1.68356556339615e-05"	"1"	"0.0160336251228772"
"citrate lyase complex"	"TAIR-GO"	"10"	"1.68356556339615e-05"	"1"	"0.0160336251228772"
"cutin biosynthesis"	"TAIR-GO"	"10"	"0"	"1"	"0"
"cysteine biosynthesis"	"TAIR-GO"	"10"	"0.00145789686544741"	"1"	"0.0440618081525677"
"etioplast organization and biogenesis"	"TAIR-GO"	"10"	"0"	"1"	"0"
"glutathione metabolism"	"TAIR-GO"	"10"	"0"	"1"	"0"
"glycine catabolism"	"TAIR-GO"	"10"	"0"	"1"	"0"
"leaf development"	"TAIR-GO"	"10"	"0"	"1"	"0"
"methionine biosynthesis from L-homoserine via cystathione"	"TAIR-GO"	"10"	"0"	"1"	"0"
"photoinhibition"	"TAIR-GO"	"10"	"0.000516564953311593"	"1"	"0.0440618081525677"
"photosynthesis, dark reaction"	"TAIR-GO"	"10"	"0"	"1"	"0"
"plastoquinone biosynthesis"	"TAIR-GO"	"10"	"1.68356556339615e-05"	"1"	"0.0160336251228772"
"positive regulation of cell size"	"TAIR-GO"	"10"	"0"	"1"	"0"
"positive regulation of transcription"	"TAIR-GO"	"10"	"0.00105311843391508"	"1"	"0.0440618081525677"
"protein binding"	"TAIR-GO"	"10"	"0.00348529040371447"	"1"	"0.123620859465642"
"protein complex assembly"	"TAIR-GO"	"10"	"0"	"1"	"0"
"proton transport"	"TAIR-GO"	"10"	"0.0239604183268644"	"1"	"0.123620859465642"
"regulation of embryonic development"	"TAIR-GO"	"10"	"0.000147062448731007"	"1"	"0.0440618081525677"
"response to chemical substance"	"TAIR-GO"	"10"	"0"	"1"	"0"
"response to oxidative stress"	"TAIR-GO"	"10"	"0.000516564953311593"	"1"	"0.123620859465642"
"RNA binding"	"TAIR-GO"	"10"	"0"	"1"	"0"
"thylakoid membrane organization and biogenesis"	"TAIR-GO"	"10"	"0"	"1"	"0"
"vitamin E biosynthesis"	"TAIR-GO"	"10"	"0.0167501722767354"	"1"	"0.080805898098889"
"glycosylglyceride desaturation pathway"	"AraCyc"	"10"	"0.00628663086769681"	"1"	"0.0686519315448386"
"peptidoglycan biosynthesis"	"AraCyc"	"10"	"0.00392936891865834"	"1"	"0.235374810098063"
"plastoquinone biosynthesis"	"AraCyc"	"10"	"0.000483735435706233"	"1"	"0.0686519315448386"
"pyridoxal 5'-phosphate biosynthesis"	"AraCyc"	"10"	"9.28958152605272e-05"	"1"	"0.105790862252914"
"thiamine biosynthesis"	"AraCyc"	"10"	"0.000958317326708702"	"1"	"0.146848099153422"
"detoxification by modification"	"FunCat"	"10"	"8.48978501202464e-07"	"1"	"0.0269687206768293"
"fatty acid biosynthesis"	"FunCat"	"10"	"6.31680913000774e-10"	"1"	"0.00961536480279899"
"ionic homeostasis "	"FunCat"	"10"	"0"	"1"	"0"
"lipid transport "	"FunCat"	"10"	"0.000378672767101986"	"2"	"0.0361283216987481"
"lipid, fatty acid and isoprenoid metabolism of energy reserves (e.g. glycogen, trehalose)"	"FunCat"	"10"	"0"	"1"	"0"
"C5-Branched dibasic acid metabolism"	"KEGG"	"10"	"0"	"1"	"0"
"Peptidoglycan biosynthesis"	"KEGG"	"10"	"0.0116250242324056"	"1"	"0.077892458769335"
"chlorophyll a biosynthesis"	"LitPath"	"10"	"0"	"1"	"0"
"chlorophyll catabolism"	"LitPath"	"10"	"0.00179750235977753"	"1"	"0.0362096203310866"
"phytol biosynthesis"	"LitPath"	"10"	"0"	"1"	"0"
"acetate metabolism"	"TAIR-GO"	"9"	"0"	"1"	"0"
"adenosine salvage"	"TAIR-GO"	"9"	"3.68628578031444e-05"	"1"	"0.0160336251228772"
"carbohydrate biosynthesis"	"TAIR-GO"	"9"	"0"	"1"	"0"
"glutamate metabolism"	"TAIR-GO"	"9"	"0"	"1"	"0"
"glyoxylate cycle"	"TAIR-GO"	"9"	"0"	"1"	"0"
"nitrogen compound metabolism"	"TAIR-GO"	"9"	"0.00109814732924156"	"1"	"0.0440618081525677"
"phosphate transport"	"TAIR-GO"	"9"	"0.00156615501188097"	"1"	"0.080805898098889"
"photosystem II (sensu Viridiplantae)"	"TAIR-GO"	"9"	"0.00683253688086496"	"1"	"0.080805898098889"
"proteolysis and peptidolysis"	"TAIR-GO"	"9"	"0"	"1"	"0"
"response to light intensity"	"TAIR-GO"	"9"	"0"	"1"	"0"
"response to pathogenic bacteria"	"TAIR-GO"	"9"	"0.041233344162879"	"1"	"0.123620859465642"
"signal transduction"	"TAIR-GO"	"9"	"0"	"1"	"0"
"sucrose biosynthesis"	"TAIR-GO"	"9"	"0"	"1"	"0"
"alanine degradation III"	"AraCyc"	"9"	"4.40344015543841e-05"	"1"	"0.0371580551429441"
"aspartate biosynthesis and degradation"	"AraCyc"	"9"	"0.0480286572359685"	"1"	"0.146848099153422"
"Taurine and hypotaurine metabolism"	"KEGG"	"9"	"0.00416399015785555"	"1"	"0.077892458769335"
"biosynthesis of extracellular lipids"	"LitPath"	"9"	"0"	"1"	"0"
"fatty acid desaturation"	"TAIR-GO"	"8"	"0.00450199476363353"	"1"	"0.0440618081525677"
"nitrate assimilation"	"TAIR-GO"	"8"	"0.00450199476363353"	"1"	"0.0440618081525677"
"nonphotochemical quenching"	"TAIR-GO"	"8"	"0.000264921917164624"	"1"	"0.0160336251228772"
"photosystem I antenna complex"	"TAIR-GO"	"8"	"0"	"1"	"0"
"photosystem II antenna complex"	"TAIR-GO"	"8"	"0.000705746897739329"	"1"	"0.0440618081525677"
"response to high light intensity"	"TAIR-GO"	"8"	"0.00605626286750253"	"1"	"0.0440618081525677"
"response to reactive oxygen species"	"TAIR-GO"	"8"	"0"	"1"	"0"
"transcription factor binding"	"TAIR-GO"	"8"	"0"	"1"	"0"
"accessory proteins of photosynthetic electron transport "	"FunCat"	"8"	"6.75628470011436e-07"	"1"	"0.00961536480279899"
"calcium-mediated signaling"	"TAIR-GO"	"7"	"0.00155256474685635"	"1"	"0.0440618081525677"
"isopentenyl diphosphate biosynthesis, mevalonate-independent pathway"	"TAIR-GO"	"7"	"0"	"1"	"0"
"systemic acquired resistance, salicylic acid mediated signaling pathway"	"TAIR-GO"	"7"	"0.000980279044771138"	"1"	"0.0440618081525677"