"Pathway"	"Pathway.source"	"V3"	"V4"	"V5"	"V6"
"IN ALL DATA SETS"	""	"sum.of.scores"	"sum.of.genes"	""	""
"Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone)"	"BioPath"	"846"	"106"	""	""
"C-compound and carbohydrate metabolism"	"FunCat"	"635"	"113"	""	""
"chlorophyll biosynthesis"	"AraCyc"	"600"	"68"	""	""
"chlorophyll biosynthesis"	"TAIR-GO"	"567"	"63"	""	""
"chlorophyll biosynthesis"	"LitPath"	"551"	"61"	""	""
"biogenesis of chloroplast"	"FunCat"	"482"	"76"	""	""
"Chlorophyll biosynthesis and breakdown"	"BioPath"	"413"	"50"	""	""
"chlorophyll and phytochromobilin metabolism"	"LitPath"	"395"	"47"	""	""
"photosynthesis"	"FunCat"	"390"	"59"	""	""
"photosynthesis"	"TAIR-GO"	"318"	"46"	""	""
"Porphyrin and chlorophyll metabolism"	"KEGG"	"303"	"35"	""	""
"transport "	"FunCat"	"271"	"52"	""	""
"Biosynthesis of steroids"	"KEGG"	"227"	"25"	""	""
"carotenoid biosynthesis"	"AraCyc"	"206"	"23"	""	""
"photosystem I"	"TAIR-GO"	"204"	"26"	""	""
"Carotenoid and abscisic acid metabolism"	"LitPath"	"184"	"22"	""	""
"photorespiration"	"AraCyc"	"184"	"38"	""	""
"Carotenoid biosynthesis"	"BioPath"	"174"	"20"	""	""
"carotenid biosynthesis"	"LitPath"	"174"	"20"	""	""
"Pentose phosphate pathway"	"KEGG"	"170"	"28"	""	""
"photosystem II"	"TAIR-GO"	"163"	"21"	""	""
"photorespiration"	"TAIR-GO"	"154"	"30"	""	""
"transport facilitation"	"FunCat"	"152"	"29"	""	""
"lipid, fatty acid and isoprenoid metabolism"	"FunCat"	"134"	"17"	""	""
"energy"	"FunCat"	"117"	"19"	""	""
"lactose degradation IV"	"AraCyc"	"112"	"26"	""	""
"mRNA processing in chloroplast"	"BioPath"	"110"	"23"	""	""
"glyoxylate cycle"	"AraCyc"	"107"	"16"	""	""
"starch biosynthesis"	"AraCyc"	"102"	"14"	""	""
"Benzoate degradation via hydroxylation"	"KEGG"	"90"	"9"	""	""
"photosynthesis light harvesting"	"TAIR-GO"	"88"	"10"	""	""
"glycosylglyceride desaturation pathway"	"AraCyc"	"81"	"9"	""	""
"phytochromobilin biosynthesis"	"LitPath"	"80"	"8"	""	""
"carotene biosynthesis"	"TAIR-GO"	"76"	"8"	""	""
"1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradatio"	"KEGG"	"74"	"8"	""	""
"Early light-inducible proteins"	"BioPath"	"74"	"10"	""	""
"protein folding"	"TAIR-GO"	"74"	"9"	""	""
"regulation of transcription"	"TAIR-GO"	"71"	"8"	""	""
"phospholipid desaturation pathway"	"AraCyc"	"70"	"7"	""	""
"1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation"	"KEGG"	"70"	"7"	""	""
"Androgen and estrogen metabolism"	"KEGG"	"70"	"7"	""	""
"phytochromobilin biosynthesis"	"TAIR-GO"	"70"	"7"	""	""
"glucose and glucose-1-phosphate degradation"	"AraCyc"	"66"	"10"	""	""
"xanthophyll cycle"	"AraCyc"	"66"	"7"	""	""
"photoinhibition"	"TAIR-GO"	"61"	"7"	""	""
"xanthophyll cycle"	"TAIR-GO"	"58"	"6"	""	""
"plastoquinone biosynthesis"	"AraCyc"	"54"	"6"	""	""
"metabolism of energy reserves (e.g. glycogen, trehalose)"	"FunCat"	"53"	"8"	""	""
"chlorophyll catabolism"	"TAIR-GO"	"50"	"5"	""	""
"plastoquinone biosynthesis"	"TAIR-GO"	"50"	"5"	""	""
"chlorophyll catabolism"	"LitPath"	"50"	"5"	""	""
"ORGAN DATA SET"	"quantDE"	"3.374198"	"maxDE"	"4.4078871"	"ORGAN DATA SET"
"Photosystems "	"BioPath"	"498"	"2.75732444214843e-173"	"74"	"6.02863133796099e-31"
"Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone)"	"BioPath"	"309"	"3.17595831043203e-44"	"39"	"4.07684124796927e-09"
"biogenesis of chloroplast"	"FunCat"	"225"	"5.2449428530076e-109"	"34"	"2.43664259628383e-20"
"additional photosystem II components"	"BioPath"	"201"	"4.49364559537108e-70"	"29"	"1.80991197555549e-14"
"C-compound and carbohydrate metabolism"	"FunCat"	"198"	"2.10584687913724e-05"	"35"	"0.0306361240039720"
"Photosystem I"	"BioPath"	"191"	"7.74984538931406e-36"	"30"	"6.17870696706852e-09"
"photosynthesis"	"FunCat"	"164"	"3.66696885995752e-85"	"25"	"8.83613091899223e-16"
"Chlorophyll biosynthesis and breakdown"	"BioPath"	"153"	"2.65674459866769e-33"	"18"	"1.88815542243586e-06"
"Photosynthesis"	"KEGG"	"153"	"1.03812315788320e-118"	"27"	"5.31845261682671e-26"
"photosystem I"	"TAIR-GO"	"151"	"0"	"19"	"0"
"chlorophyll and phytochromobilin metabolism"	"LitPath"	"147"	"3.00052908486681e-52"	"17"	"2.01772685466789e-08"
"Chlorophyll a/b binding proteins"	"BioPath"	"146"	"2.64297224530387e-84"	"18"	"3.9777027772486e-14"
"glycolysis and gluconeogenesis"	"FunCat"	"137"	"1.66641722920450e-14"	"21"	"0.00250566923441722"
"Porphyrin and chlorophyll metabolism"	"KEGG"	"121"	"1.08749249146648e-67"	"14"	"4.19271301966068e-10"
"photosystem II"	"TAIR-GO"	"118"	"0"	"15"	"0"
"chlorophyll biosynthesis"	"AraCyc"	"118"	"6.98374979260253e-35"	"14"	"0.000782848235012738"
"Photosystem II"	"BioPath"	"117"	"3.33770501208565e-14"	"16"	"0.000628925393493242"
"Carbon fixation"	"KEGG"	"112"	"9.3028180735014e-28"	"16"	"1.70892453089901e-05"
"transport "	"FunCat"	"95"	"0"	"18"	"0"
"photosynthesis"	"TAIR-GO"	"92"	"1.10928387745623e-34"	"12"	"5.03120847344197e-06"
"Folding, Sorting and Degradation"	"KEGG"	"87"	"1.35858981795775e-05"	"13"	"0.0657375901643944"
"chlorophyll binding"	"TAIR-GO"	"86"	"2.19881097064939e-45"	"10"	"3.90874740235961e-07"
"chlorophyll biosynthesis"	"TAIR-GO"	"85"	"1.95898556014718e-29"	"9"	"1.96051346184435e-05"
"Calvin cycle"	"AraCyc"	"76"	"5.85147664061362e-22"	"13"	"6.45797868753575e-05"
"Biosynthesis of steroids"	"KEGG"	"76"	"5.59162432844787e-10"	"9"	"0.00428925779967009"
"Glycolysis / Gluconeogenesis"	"KEGG"	"76"	"3.96433004398257e-07"	"11"	"0.0270520892117244"
"Pathway for nuclear-encoded, thylakoid-localized proteins"	"BioPath"	"72"	"4.88921520081824e-26"	"9"	"1.50397199487522e-05"
"chlorophyll biosynthesis"	"LitPath"	"69"	"1.83412166296948e-40"	"7"	"9.80610276944188e-07"
"Carotenoid and abscisic acid metabolism"	"LitPath"	"68"	"2.5962050013304e-18"	"9"	"0.000188573286438782"
"Carotenoid biosynthesis"	"BioPath"	"64"	"3.09584252714417e-21"	"8"	"1.79252242271991e-05"
"photorespiration"	"AraCyc"	"64"	"2.74492180840892e-23"	"13"	"1.46777037982499e-05"
"carotenid biosynthesis"	"LitPath"	"64"	"7.96873094911958e-32"	"8"	"6.9384231661638e-07"
"acetate fermentation"	"AraCyc"	"62"	"6.64759193255673e-05"	"10"	"0.183901587454655"
"carotenoid biosynthesis"	"AraCyc"	"62"	"5.94917137770853e-33"	"7"	"1.44404713651173e-06"
"fructose degradation (anaerobic)"	"AraCyc"	"62"	"9.95110186007968e-06"	"10"	"0.125695831406757"
"glycolysis IV"	"AraCyc"	"62"	"1.28133463449898e-05"	"10"	"0.136414220038017"
"sorbitol fermentation"	"AraCyc"	"62"	"8.27076317889253e-05"	"10"	"0.159263372393127"
"Pentose phosphate pathway"	"KEGG"	"62"	"6.56608912047655e-16"	"9"	"0.00172743203396606"
"gluconeogenesis"	"AraCyc"	"61"	"6.19711648461423e-08"	"9"	"0.0365175288835089"
"biosynthesis of proto- and siroheme"	"AraCyc"	"60"	"2.82848209373037e-09"	"9"	"0.0198193410049167"
"Synthesis of membrane lipids in plastids"	"AcylLipid"	"59"	"1.57947431008584e-23"	"7"	"5.68225276854429e-05"
"Fructose and mannose metabolism"	"KEGG"	"58"	"1.35010389075544e-08"	"9"	"0.00428925779967009"
"Protein export"	"KEGG"	"57"	"4.58085166477176e-22"	"8"	"0.000440423450524717"
"electron transport"	"TAIR-GO"	"51"	"2.1114828741905e-07"	"7"	"0.0194811588918872"
"photosynthesis light harvesting"	"TAIR-GO"	"50"	"2.92986611679104e-29"	"6"	"4.56625071010118e-05"
"light harvesting complex"	"BioPath"	"48"	"0"	"6"	"0"
"chlorophyll and phyochromobilin biosynthesis"	"LitPath"	"48"	"4.04060948045541e-17"	"7"	"0.000176193328649059"
"Fatty acid elongation and wax and cutin metabolism"	"AcylLipid"	"47"	"5.89602911906145e-07"	"8"	"0.0460593855998602"
"mRNA processing in chloroplast"	"BioPath"	"46"	"1.56428017879918e-20"	"9"	"4.22426866047316e-06"
"porphyrin biosynthesis"	"TAIR-GO"	"46"	"3.76637237913520e-12"	"6"	"0.00416778816813777"
"respiration"	"FunCat"	"46"	"3.00532377017785e-16"	"7"	"3.33025118828954e-05"
"Photosystem II reaction center"	"BioPath"	"44"	"9.19593712647518e-15"	"6"	"0.000838649242293111"
"serine-isocitrate lyase pathway"	"AraCyc"	"44"	"0.0121136647459608"	"7"	"0.162850796884971"
"transport facilitation"	"FunCat"	"44"	"0"	"9"	"0"
"Chloroplastic protein turnover"	"BioPath"	"42"	"2.10061700304981e-15"	"9"	"4.22426866047316e-06"
"photosynthesis light harvesting in photosystem I"	"TAIR-GO"	"40"	"1.03861718522147e-22"	"5"	"0.000221009171364399"
"aerobic respiration"	"FunCat"	"40"	"5.46512623313584e-12"	"5"	"0.00227202721687592"
"energy"	"FunCat"	"40"	"0"	"5"	"0"
"Benzoate degradation via hydroxylation"	"KEGG"	"40"	"1.37131749540046e-20"	"4"	"0.000748670669537321"
"Glucosinolate Metabolism"	"LitPath"	"40"	"0.0126992345838436"	"4"	"0.116552181755772"
"acetyl-CoA assimilation"	"AraCyc"	"39"	"0.000887444990074272"	"6"	"0.0796452639831893"
"lipid, fatty acid and isoprenoid metabolism"	"FunCat"	"39"	"0.0348967706562915"	"5"	"0.22689581799137"
"ascorbic acid biosynthesis"	"BioPath"	"38"	"0.034291546658824"	"6"	"0.10729996145204"
"glycine biosynthesis I"	"AraCyc"	"38"	"2.67922267185013e-05"	"9"	"0.0272649122504207"
"superpathway of serine and glycine biosynthesis II"	"AraCyc"	"38"	"3.01747039199615e-14"	"9"	"9.32864608854235e-05"
"chloroplast thylakoid membrane protein import"	"TAIR-GO"	"37"	"0"	"4"	"0"
"glycosylglyceride desaturation pathway"	"AraCyc"	"37"	"0"	"4"	"0"
"Ascorbate and aldarate metabolism"	"KEGG"	"37"	"4.32960851227602e-06"	"5"	"0.0157203940520291"
"Cytochrome b6/f complex"	"BioPath"	"36"	"4.18530875414749e-12"	"4"	"0.0193328181306302"
"photosystem II type I  chlorophyll a /b binding protein"	"BioPath"	"36"	"0"	"4"	"0"
"protein biosynthesis"	"TAIR-GO"	"36"	"0"	"6"	"0"
"cysteine biosynthesis I"	"AraCyc"	"36"	"0.0124026798064189"	"9"	"0.0139821026502770"
"glyceraldehyde 3-phosphate degradation"	"AraCyc"	"35"	"1.73830024468402e-07"	"5"	"0.0486284240244926"
"lactose degradation IV"	"AraCyc"	"35"	"0"	"9"	"0"
"Transcription (chloroplast)"	"BioPath"	"34"	"4.9241712511594e-09"	"4"	"0.00459929950769985"
"photorespiration"	"TAIR-GO"	"34"	"0"	"5"	"0"
"transcription initiation"	"TAIR-GO"	"34"	"7.06804709986904e-10"	"4"	"0.00705164832868083"
"mannitol degradation"	"AraCyc"	"34"	"3.50224138907438e-08"	"6"	"0.0235894313410528"
"sorbitol degradation"	"AraCyc"	"34"	"1.12254962794439e-07"	"6"	"0.0290609116822939"
"gamma-Hexachlorocyclohexane degradation"	"KEGG"	"33"	"4.3634073505552e-08"	"4"	"0.0111859220102814"
"ATP synthase components"	"BioPath"	"32"	"9.00197537864207e-06"	"5"	"0.00624539758084805"
"photosystem I reaction center"	"BioPath"	"32"	"4.70826299089445e-13"	"7"	"1.80964395754062e-05"
"ATP-dependent proteolysis"	"TAIR-GO"	"32"	"9.201827243663e-13"	"8"	"8.55949584158759e-06"
"photosynthesis light harvesting in photosystem II"	"TAIR-GO"	"32"	"1.21316787490494e-20"	"4"	"0.000205621247815775"
"pentose-phosphate pathway "	"FunCat"	"32"	"2.16206953408598e-06"	"4"	"0.0530045788646876"
"assimilation of ammonia, metabolism of the glutamate group"	"FunCat"	"31"	"0.00123541894672519"	"4"	"0.0530045788646876"
"Glycine, serine and threonine metabolism"	"KEGG"	"31"	"0.0115550824911693"	"6"	"0.0287889640988555"
"SRP (signal recognition particle)-dependent pathway for integral membrane proteins"	"BioPath"	"30"	"1.93480995838179e-07"	"3"	"0.0167980796979546"
"pentose-phosphate shunt"	"TAIR-GO"	"30"	"2.81058151033234e-05"	"4"	"0.0525318703967671"
"phospholipid desaturation pathway"	"AraCyc"	"30"	"4.71536854334737e-15"	"3"	"0.000918949149907566"
"1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradatio"	"KEGG"	"30"	"2.48856631011660e-16"	"3"	"0.00453089925019172"
"1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation"	"KEGG"	"30"	"8.43960151896842e-21"	"3"	"0.000663052774624197"
"Androgen and estrogen metabolism"	"KEGG"	"30"	"6.70641188657872e-20"	"3"	"0.0014439544121642"
"Protein folding and associated processing"	"KEGG"	"30"	"4.81336662835465e-06"	"5"	"0.0190212637349706"
"MEP (methylerythritol P) pathway, plastids"	"LitPath"	"30"	"2.79548765664568e-09"	"4"	"0.00403910871118654"
"photosynthetic electron transport"	"TAIR-GO"	"29"	"1.09262716082475e-12"	"4"	"0.00104679907978940"
"Fluorene degradation"	"KEGG"	"29"	"1.62107076855949e-07"	"3"	"0.0326747107353727"
"ClpP protease complex "	"BioPath"	"28"	"5.03915306969712e-13"	"7"	"1.80964395754062e-05"
"Oxygen-evolving enhancer protein"	"BioPath"	"28"	"2.77700995082556e-14"	"4"	"0.000314002252186204"
"Thylakoid biogenesis and photosystem assembly"	"BioPath"	"28"	"0.000282313059067258"	"3"	"0.0330631199516277"
"carotene biosynthesis"	"TAIR-GO"	"28"	"0"	"3"	"0"
"regulation of transcription"	"TAIR-GO"	"28"	"0"	"3"	"0"
"ascorbate glutathione cycle"	"AraCyc"	"28"	"2.25190034073013e-05"	"5"	"0.00795393643550742"
"formylTHF biosynthesis"	"AraCyc"	"28"	"2.52629385402727e-06"	"4"	"0.0549253224547066"
"glyoxylate cycle"	"AraCyc"	"28"	"0.0202577509269504"	"4"	"0.131882008595092"
"Sulfur metabolism"	"KEGG"	"28"	"0.00823646566720702"	"3"	"0.110098523034773"
"Streptomycin biosynthesis"	"KEGG"	"27"	"8.4448325841657e-09"	"3"	"0.0195841327799644"
"Early light-inducible proteins"	"BioPath"	"26"	"2.27122934795489e-06"	"4"	"0.00459929950769985"
"photosystem I subunit precursor"	"BioPath"	"26"	"0"	"5"	"0"
"cytochrome b6f complex"	"TAIR-GO"	"26"	"2.72739926025989e-10"	"3"	"0.0123638218444094"
"photosystem II (sensu Viridiplantae)"	"TAIR-GO"	"25"	"1.90469151458166e-14"	"3"	"0.00112832499851850"
"jasmonic acid biosynthesis"	"AraCyc"	"25"	"0.0161423889484207"	"4"	"0.0549253224547066"
"degradation "	"FunCat"	"25"	"0.00133441887794955"	"5"	"0.0404823963757913"
"protein degradation "	"FunCat"	"25"	"2.38309987019791e-06"	"5"	"0.00869941248798678"
"Delta-pH pathway"	"BioPath"	"24"	"0"	"3"	"0"
"photosystem II type II  chlorophyll a /b binding protein"	"BioPath"	"24"	"7.27973205459577e-11"	"3"	"0.00158075658515032"
"Translation (chloroplast)"	"BioPath"	"24"	"1.53465933887898e-06"	"5"	"0.000361949634066077"
"very-long-chain fatty acid metabolism"	"TAIR-GO"	"24"	"0.0314605081939076"	"4"	"0.124491426207242"
"wax biosynthesis"	"TAIR-GO"	"24"	"1.07481951910391e-05"	"3"	"0.024700552502486"
"isopentenyl diphosphate biosynthesis -- mevalonate-independent"	"AraCyc"	"24"	"3.2523546172931e-11"	"3"	"0.00249587136822255"
"oxidative branch of the pentose phosphate pathway"	"AraCyc"	"24"	"9.43947723647829e-09"	"6"	"0.000302967609370014"
"electron transport and membrane-associated energy conservation "	"FunCat"	"24"	"5.97001160863908e-12"	"3"	"0.00845585429377775"
"Glyoxylate and dicarboxylate metabolism"	"KEGG"	"24"	"0.0339147891886398"	"4"	"0.0828203258295306"
"Ferredoxin"	"BioPath"	"22"	"2.56869815732257e-05"	"5"	"0.00300134857771508"
"glucose and glucose-1-phosphate degradation"	"AraCyc"	"22"	"7.8611633203745e-07"	"4"	"0.0136365440802416"
"biosynthesis of derivatives of homoisopentenyl pyrophosphate "	"FunCat"	"22"	"0.00335025631304727"	"3"	"0.0564403709520466"
"transported compounds (substrates)"	"FunCat"	"22"	"0"	"5"	"0"
"Plastocyanin"	"BioPath"	"20"	"0"	"2"	"0"
"Regulatory enzymes"	"BioPath"	"20"	"6.76361737747531e-08"	"2"	"0.00794577645932296"
"Transcriptional regulators (chloroplast)"	"BioPath"	"20"	"0"	"2"	"0"
"chloroplast-nucleus signaling pathway"	"TAIR-GO"	"20"	"2.62904591059839e-09"	"2"	"0.00617742177959848"
"chloroplastic endopeptidase Clp complex"	"TAIR-GO"	"20"	"3.27041179547973e-10"	"5"	"0.000221009171364399"
"cuticle biosynthesis"	"TAIR-GO"	"20"	"0.0231085674481215"	"3"	"0.163878426088974"
"oxygen evolving complex"	"TAIR-GO"	"20"	"0"	"3"	"0"
"photosynthetic water oxidation"	"TAIR-GO"	"20"	"0"	"2"	"0"
"positive regulation of transcription"	"TAIR-GO"	"20"	"9.66923172582288e-10"	"2"	"0.00617742177959848"
"ammonia assimilation cycle"	"AraCyc"	"20"	"0.00038006970179898"	"2"	"0.0825503509333684"
"glutamine biosynthesis I"	"AraCyc"	"20"	"5.5123627198745e-05"	"2"	"0.0412307465042243"
"glycine degradation I"	"AraCyc"	"20"	"6.34244507578965e-10"	"5"	"0.00017454715718672"
"nitrate assimilation pathway"	"AraCyc"	"20"	"0.00625364715010001"	"2"	"0.107822486878813"
"starch biosynthesis"	"AraCyc"	"20"	"0"	"3"	"0"
"biosynthesis of vitamins, cofactors, and prosthetic groups"	"FunCat"	"20"	"0.000298491806908604"	"3"	"0.0448312352231196"
"Membrane Transport"	"KEGG"	"20"	"0.000312926960525791"	"3"	"0.110098523034773"
"phytochromobilin biosynthesis"	"LitPath"	"20"	"0.000493997693933101"	"2"	"0.0625639746714922"
"psbP family of thylakoid proteins"	"BioPath"	"18"	"1.02290708872922e-08"	"5"	"6.22784973168709e-05"
"Sec (secretory) pathway"	"BioPath"	"18"	"1.29282581094833e-11"	"3"	"0.00158075658515032"
"nonphotochemical quenching"	"TAIR-GO"	"18"	"0"	"2"	"0"
"sugar mediated signaling"	"TAIR-GO"	"18"	"0.0039133305150989"	"2"	"0.0798023187657947"
"cysteine biosynthesis II"	"AraCyc"	"18"	"0.0121938420033738"	"7"	"0.00379168483765743"
"histidine biosynthesis"	"AraCyc"	"18"	"0.0202136533953580"	"2"	"0.298418454749279"
"serine biosynthesis"	"AraCyc"	"18"	"3.92052304795795e-08"	"7"	"0"
"xanthophyll cycle"	"AraCyc"	"18"	"0"	"2"	"0"
"Other ion-coupled transporters"	"KEGG"	"18"	"5.14127467382549e-06"	"2"	"0.0747522594276983"
"photoinhibition"	"TAIR-GO"	"17"	"1.19962339724651e-07"	"2"	"0.00617742177959848"
"photosystem II assembly"	"TAIR-GO"	"17"	"1.14571804776518e-10"	"2"	"0.00617742177959848"
"photosystem II stabilization"	"TAIR-GO"	"17"	"0"	"2"	"0"
"galactose degradation I"	"AraCyc"	"17"	"1.15822114197053e-09"	"5"	"1.80032956061638e-05"
"starch degradation"	"AraCyc"	"17"	"0.0384461469725381"	"3"	"0.094811648665545"
"chlorophyll A apoprotein"	"BioPath"	"16"	"2.18679942680645e-10"	"2"	"0.00794577645932296"
"ATP synthesis coupled proton transport"	"TAIR-GO"	"16"	"0.00138899366593967"	"2"	"0.046083070305102"
"magnesium chelatase complex"	"TAIR-GO"	"16"	"0"	"2"	"0"
"photosystem I reaction center"	"TAIR-GO"	"16"	"5.07224970319755e-10"	"2"	"0.00617742177959848"
"photosystem II reaction center"	"TAIR-GO"	"16"	"6.87223996465998e-08"	"2"	"0.0213247121228385"
"proton transport"	"TAIR-GO"	"16"	"0.00138899366593967"	"2"	"0.046083070305102"
"PSII associated light-harvesting complex II"	"TAIR-GO"	"16"	"0"	"2"	"0"
"response to high light intensity"	"TAIR-GO"	"16"	"4.14851313981884e-07"	"2"	"0.00617742177959848"
"response to jasmonic acid stimulus"	"TAIR-GO"	"16"	"0.0291487107509172"	"2"	"0.121128643463276"
"epicuticular wax biosynthesis"	"AraCyc"	"16"	"1.13063643945795e-10"	"2"	"0.00170601033494613"
"metabolism of energy reserves (e.g. glycogen, trehalose)"	"FunCat"	"16"	"0"	"2"	"0"
"nucleotide metabolism"	"FunCat"	"16"	"0"	"3"	"0"
"photosynthetic electron transport in photosystem I"	"TAIR-GO"	"15"	"1.40779765120126e-06"	"2"	"0.00617742177959848"
"response to water deprivation"	"TAIR-GO"	"15"	"0"	"2"	"0"
"lipid biosynthesis"	"TAIR-GO"	"14"	"0.0498451965037319"	"2"	"0.046083070305102"
"photosynthesis, light reaction"	"TAIR-GO"	"14"	"0.000168730858904566"	"2"	"0.046083070305102"
"photosystem II antenna complex"	"TAIR-GO"	"14"	"1.23294410177023e-07"	"2"	"0.00617742177959848"
"4-hydroxyproline degradation"	"AraCyc"	"14"	"0.00953588502958416"	"3"	"0.0336282841031668"
"ascorbate biosynthesis"	"AraCyc"	"14"	"0.000575563089592017"	"2"	"0.0825503509333684"
"plastoquinone biosynthesis"	"AraCyc"	"14"	"8.38605636078657e-07"	"2"	"0.00621475193444663"
"vitamin E biosynthesis"	"AraCyc"	"14"	"0.0112489671441856"	"2"	"0.0412307465042243"
"accessory proteins of electron transport and membrane-associated energy conservation"	"FunCat"	"14"	"1.00372640003093e-11"	"2"	"0.00101450565316499"
"biosynthesis of glycosides"	"FunCat"	"14"	"1.00372640003093e-11"	"2"	"0.00101450565316499"
"metabolismn of primary metabolic sugars derivatives "	"FunCat"	"14"	"1.00372640003093e-11"	"2"	"0.00101450565316499"
"one-carbon compound metabolism"	"TAIR-GO"	"13"	"0.000169363120064249"	"2"	"0.0213247121228385"
"phosphate transport"	"TAIR-GO"	"13"	"9.9311314705745e-05"	"2"	"0.0213247121228385"
"starch catabolism"	"TAIR-GO"	"13"	"1.52034829982995e-05"	"2"	"0.00617742177959848"
"folate biosynthesis"	"AraCyc"	"13"	"0.0290280865165585"	"2"	"0.230186958371785"
"stress response"	"FunCat"	"13"	"0"	"3"	"0"
"Aminosugars metabolism"	"KEGG"	"13"	"0.0475797394497034"	"3"	"0.0961814270787074"
"Plastoquinone biosynthesis"	"BioPath"	"12"	"0"	"2"	"0"
"glycine decarboxylation via glycine cleavage system"	"TAIR-GO"	"12"	"0"	"2"	"0"
"plastid large ribosomal subunit"	"TAIR-GO"	"12"	"0"	"2"	"0"
"plastid organization and biogenesis"	"TAIR-GO"	"12"	"0.000459666270689264"	"2"	"0.0213247121228385"
"RNA processing"	"TAIR-GO"	"12"	"0"	"2"	"0"
"cyanate degradation"	"AraCyc"	"12"	"0.000373784869254378"	"2"	"0.19724552262563"
"peptidoglycan biosynthesis"	"AraCyc"	"12"	"0.000519589311999183"	"2"	"0.0602334728343038"
"thiamine biosynthesis"	"AraCyc"	"12"	"8.2882608957167e-05"	"2"	"0.0258210408542879"
"UDP-N-acetylglucosamine biosynthesis"	"AraCyc"	"12"	"0.00993129968591823"	"2"	"0.0412307465042243"
"accessory proteins of photosynthetic electron transport "	"FunCat"	"12"	"0"	"2"	"0"
"C-compound and carbohydrate utilization "	"FunCat"	"12"	"1.50379690755817e-11"	"2"	"0"
"electron / hydrogen transport "	"FunCat"	"12"	"0.000133058628878449"	"2"	"0.0160826722533159"
"protein targeting, sorting and translocation"	"FunCat"	"11"	"0.00888685878258764"	"2"	"0.053749289707485"
"transcription"	"FunCat"	"11"	"0.030077800778343"	"2"	"0.160623965226758"
"FtsH protease (many homologues / subcellular localization ambiguous)"	"BioPath"	"10"	"0"	"1"	"0"
"Other cell wall metabolism related enzymes"	"BioPath"	"10"	"0.00205106983576308"	"1"	"0.0398793704871323"
"cell communication"	"TAIR-GO"	"10"	"0"	"1"	"0"
"cell differentiation"	"TAIR-GO"	"10"	"2.50116862006542e-05"	"2"	"0.00617742177959848"
"chalcone biosynthesis"	"TAIR-GO"	"10"	"0"	"1"	"0"
"chaperone cofactor dependent protein folding"	"TAIR-GO"	"10"	"0"	"1"	"0"
"chlorophyll catabolism"	"TAIR-GO"	"10"	"0.0213183539555532"	"1"	"0.088875720032385"
"chloroplast ATP synthase complex"	"TAIR-GO"	"10"	"0.000442712415702533"	"1"	"0.0337435211971940"
"chloroplast envelope"	"TAIR-GO"	"10"	"0"	"1"	"0"
"cysteine biosynthesis"	"TAIR-GO"	"10"	"0.0213183539555532"	"1"	"0.088875720032385"
"cytochrome b6f complex assembly"	"TAIR-GO"	"10"	"0"	"1"	"0"
"enzyme binding"	"TAIR-GO"	"10"	"0"	"1"	"0"
"extrinsic to photosynthetic water oxidation"	"TAIR-GO"	"10"	"0"	"1"	"0"
"fatty acid oxidation"	"TAIR-GO"	"10"	"0"	"1"	"0"
"glucosinolate catabolism"	"TAIR-GO"	"10"	"0.000241726756189431"	"1"	"0.0337435211971940"
"glutathione metabolism"	"TAIR-GO"	"10"	"0"	"1"	"0"
"hexokinase-dependent signaling"	"TAIR-GO"	"10"	"0"	"1"	"0"
"lipoic acid metabolism"	"TAIR-GO"	"10"	"0"	"1"	"0"
"photosynthetic electron transport in cytochrome b6/f"	"TAIR-GO"	"10"	"3.07872396145248e-06"	"1"	"0.0337435211971940"
"phytochromobilin biosynthesis"	"TAIR-GO"	"10"	"0.0213183539555532"	"1"	"0.088875720032385"
"plastoquinone biosynthesis"	"TAIR-GO"	"10"	"0.000442712415702533"	"1"	"0.0337435211971940"
"protein binding"	"TAIR-GO"	"10"	"0.0429964128514950"	"1"	"0.229989166366484"
"protein complex assembly"	"TAIR-GO"	"10"	"0"	"1"	"0"
"protein folding"	"TAIR-GO"	"10"	"0"	"1"	"0"
"response to bacteria"	"TAIR-GO"	"10"	"0"	"1"	"0"
"response to chemical substance"	"TAIR-GO"	"10"	"0"	"1"	"0"
"response to gravity"	"TAIR-GO"	"10"	"0"	"1"	"0"
"response to temperature"	"TAIR-GO"	"10"	"0.0163084404345970"	"1"	"0.088875720032385"
"RNA binding"	"TAIR-GO"	"10"	"0"	"1"	"0"
"tetrapyrrole binding"	"TAIR-GO"	"10"	"0"	"1"	"0"
"thylakoid membrane organization and biogenesis"	"TAIR-GO"	"10"	"0"	"1"	"0"
"xanthophyll cycle"	"TAIR-GO"	"10"	"0"	"1"	"0"
"xanthophyll metabolism"	"TAIR-GO"	"10"	"0"	"1"	"0"
"glucosinolate biosynthesis from phenylalanine"	"AraCyc"	"10"	"0.017777060153847"	"1"	"0.072784995550601"
"homomethionine biosynthesis"	"AraCyc"	"10"	"0"	"1"	"0"
"pyridoxal 5'-phosphate biosynthesis"	"AraCyc"	"10"	"0.000159224995097832"	"1"	"0.111869355176832"
"ionic homeostasis "	"FunCat"	"10"	"0"	"1"	"0"
"lipid, fatty acid and isoprenoid metabolism of energy reserves (e.g. glycogen, trehalose)"	"FunCat"	"10"	"0"	"1"	"0"
"Peptidoglycan biosynthesis"	"KEGG"	"10"	"0.00379188231614521"	"1"	"0.0603198432019076"
"chlorophyll a biosynthesis"	"LitPath"	"10"	"0"	"1"	"0"
"chlorophyll catabolism"	"LitPath"	"10"	"0.00415881366562199"	"1"	"0.0539302007256675"
"phytol biosynthesis"	"LitPath"	"10"	"0"	"1"	"0"
"calcium ion transport"	"TAIR-GO"	"9"	"0.000731170692202786"	"1"	"0.0337435211971940"
"carbohydrate biosynthesis"	"TAIR-GO"	"9"	"0"	"1"	"0"
"histidine biosynthesis"	"TAIR-GO"	"9"	"0.0144780080408443"	"1"	"0.088875720032385"
"myo-inositol biosynthesis"	"TAIR-GO"	"9"	"0"	"1"	"0"
"proteolysis and peptidolysis"	"TAIR-GO"	"9"	"0"	"1"	"0"
"response to light intensity"	"TAIR-GO"	"9"	"0"	"1"	"0"
"response to microbial phytotoxin"	"TAIR-GO"	"9"	"0"	"1"	"0"
"sucrose biosynthesis"	"TAIR-GO"	"9"	"0"	"1"	"0"
"alanine degradation III"	"AraCyc"	"9"	"7.35597873052359e-05"	"1"	"0.0394998737425238"
"biosynthesis of extracellular lipids"	"LitPath"	"9"	"0"	"1"	"0"
"hydrogen peroxide catabolism"	"TAIR-GO"	"8"	"0"	"2"	"0"
"photosystem I (sensu Viridiplantae)"	"TAIR-GO"	"8"	"0"	"1"	"0"
"photosystem I antenna complex"	"TAIR-GO"	"8"	"0"	"1"	"0"
"xanthophyll biosynthesis "	"TAIR-GO"	"8"	"0"	"1"	"0"
"C-compound and carbohydrate transport "	"FunCat"	"8"	"6.38321681070817e-06"	"2"	"0.00375396422062559"
"secondary biosynthesis of derivatives of homoisopentenyl pyrophosphate "	"FunCat"	"8"	"0"	"1"	"0"
"Thiamine metabolism"	"KEGG"	"8"	"0.0166595637662055"	"2"	"0.0244971592668573"
"proton gradient regulation"	"BioPath"	"7"	"0"	"1"	"0"
"photomorphogenesis"	"TAIR-GO"	"7"	"0.0139351964462405"	"1"	"0.088875720032385"
"response to pest, pathogen or parasite"	"TAIR-GO"	"7"	"1.54120999908869e-05"	"1"	"0.0337435211971940"
"signal sequence binding"	"TAIR-GO"	"7"	"0"	"1"	"0"
"STRESS DATA SET"	"quantDE"	"1.473364"	"maxDE"	"2.750216"	"STRESS DATA SET"
"Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone)"	"BioPath"	"213"	"1.24640776930588e-67"	"26"	"1.12095563554295e-10"
"C-compound and carbohydrate metabolism"	"FunCat"	"135"	"3.03171301538921e-22"	"22"	"0.000451822229858117"
"Photosystems "	"BioPath"	"113"	"2.65658303221504e-10"	"20"	"0.000104107725390335"
"Chlorophyll biosynthesis and breakdown"	"BioPath"	"111"	"2.15888731563296e-46"	"13"	"9.64330198998913e-08"
"chlorophyll and phytochromobilin metabolism"	"LitPath"	"105"	"5.3624536212724e-42"	"12"	"4.1854839271603e-07"
"chlorophyll biosynthesis"	"TAIR-GO"	"85"	"1.89331988219872e-69"	"9"	"1.69552469963325e-10"
"glycolysis and gluconeogenesis"	"FunCat"	"79"	"2.39798673046570e-18"	"12"	"0.00103072143663639"
"chlorophyll biosynthesis"	"AraCyc"	"76"	"2.01100543447446e-30"	"9"	"0.000829821299654537"
"Porphyrin and chlorophyll metabolism"	"KEGG"	"75"	"5.61273345435002e-49"	"8"	"5.95850450393148e-07"
"photosynthesis"	"FunCat"	"74"	"4.69682771456554e-39"	"12"	"1.20769198603385e-08"
"biogenesis of chloroplast"	"FunCat"	"65"	"6.84321030778489e-21"	"13"	"1.12271413063612e-07"
"additional photosystem II components"	"BioPath"	"64"	"7.39318734381416e-13"	"11"	"4.10415229291693e-05"
"chlorophyll biosynthesis"	"LitPath"	"59"	"1.75658963226757e-41"	"6"	"6.49946887785778e-07"
"Pathway for nuclear-encoded, thylakoid-localized proteins"	"BioPath"	"58"	"8.94490836353923e-36"	"7"	"1.77297224541901e-06"
"Carbon fixation"	"KEGG"	"51"	"3.14993987324984e-13"	"8"	"0.00107870473064744"
"Pentose phosphate pathway"	"KEGG"	"50"	"7.55151729365876e-24"	"7"	"0.000187767082089382"
"Folding, Sorting and Degradation"	"KEGG"	"48"	"4.60008348683699e-06"	"8"	"0.0284169290225426"
"Glycolysis / Gluconeogenesis"	"KEGG"	"48"	"1.58877047113192e-09"	"7"	"0.0119928723159496"
"Transcription (chloroplast)"	"BioPath"	"44"	"1.36351298631252e-34"	"5"	"1.99337620118788e-06"
"transcription initiation"	"TAIR-GO"	"44"	"3.68748107273333e-39"	"5"	"6.92782476546436e-07"
"Photosynthesis"	"KEGG"	"43"	"2.27165334323393e-19"	"10"	"3.11103470546883e-08"
"Biosynthesis of prenyl diphosphates"	"BioPath"	"40"	"0.0200196155470751"	"5"	"0.152716408874720"
"Starch and sucrose metabolism"	"KEGG"	"40"	"9.57834624839215e-06"	"6"	"0.0311542751166042"
"Synthesis of membrane lipids in plastids"	"AcylLipid"	"39"	"1.37496009686322e-32"	"5"	"5.00244238544149e-06"
"Carotenoid biosynthesis"	"BioPath"	"36"	"2.72079084733985e-15"	"4"	"0.00114517495303582"
"biosynthesis of proto- and siroheme"	"AraCyc"	"36"	"1.01151723709112e-08"	"5"	"0.0332966022088784"
"carotenoid biosynthesis"	"AraCyc"	"36"	"1.10929320498457e-20"	"4"	"0.000144916453500102"
"Biosynthesis of steroids"	"KEGG"	"36"	"4.34901578697372e-06"	"4"	"0.037049925590194"
"Protein export"	"KEGG"	"36"	"1.0297298576121e-18"	"5"	"0.000887987961506729"
"carotenid biosynthesis"	"LitPath"	"36"	"4.22300442534196e-15"	"4"	"0.00109642069879496"
"Carotenoid and abscisic acid metabolism"	"LitPath"	"36"	"5.46239166565244e-08"	"4"	"0.0250105935299590"
"mRNA processing in chloroplast"	"BioPath"	"32"	"6.98689201069773e-20"	"7"	"7.34099101208124e-07"
"acetate fermentation"	"AraCyc"	"32"	"0.000609966238948845"	"5"	"0.219856346804761"
"fructose degradation (anaerobic)"	"AraCyc"	"32"	"0.000210409934218776"	"5"	"0.172966320722930"
"glycolysis IV"	"AraCyc"	"32"	"0.000242049128782553"	"5"	"0.181993198820254"
"sorbitol fermentation"	"AraCyc"	"32"	"0.00069074687359539"	"5"	"0.200591247544444"
"pentose-phosphate pathway "	"FunCat"	"32"	"1.18561600151527e-17"	"4"	"0.00143741304248776"
"chloroplast thylakoid membrane protein import"	"TAIR-GO"	"30"	"7.30813407629934e-32"	"3"	"9.35995473758098e-06"
"lipid, fatty acid and isoprenoid metabolism"	"FunCat"	"30"	"3.58391798416581e-07"	"3"	"0.0912244362326879"
"IPP (isopentenyl diphosphate) and DMAPP (dimethylallyl diphosphat) biosynthesis"	"LitPath"	"30"	"3.89716391851694e-05"	"4"	"0.0203443350549486"
"MEP (methylerythritol P) pathway, plastids"	"LitPath"	"30"	"3.49367777978453e-15"	"4"	"0.000341364277381641"
"starch metabolism"	"BioPath"	"28"	"0.00207347395726730"	"5"	"0.0333492782910034"
"Calvin cycle"	"AraCyc"	"28"	"3.02826359916383e-06"	"5"	"0.0237157115039341"
"starch biosynthesis"	"AraCyc"	"27"	"0"	"4"	"0"
"Chlorophyll a/b binding proteins"	"BioPath"	"26"	"0.000742631032871436"	"3"	"0.0664007728263842"
"gluconeogenesis"	"AraCyc"	"26"	"0.00142206885239314"	"4"	"0.128875995393483"
"Glycerolipid metabolism"	"KEGG"	"26"	"2.22968958640085e-06"	"4"	"0.00976525873748231"
"chlorophyll and phyochromobilin biosynthesis"	"LitPath"	"26"	"4.5408559007506e-08"	"4"	"0.00389704086676422"
"Early light-inducible proteins"	"BioPath"	"24"	"1.19957025771573e-13"	"3"	"0.00132085386252501"
"pentose-phosphate shunt"	"TAIR-GO"	"24"	"5.55154430428916e-12"	"3"	"0.00325807275420517"
"photosynthesis"	"TAIR-GO"	"24"	"1.67440847168581e-06"	"3"	"0.0225304235619169"
"porphyrin biosynthesis"	"TAIR-GO"	"24"	"1.81392898301720e-10"	"3"	"0.00450490312431694"
"lactose degradation IV"	"AraCyc"	"24"	"3.52797227858040e-27"	"5"	"2.88094620218314e-07"
"formaldehyde assimilation I (serine pathway)"	"AraCyc"	"22"	"0.000163605868716353"	"4"	"0.0442487941197809"
"mannitol degradation"	"AraCyc"	"22"	"3.63747032771395e-08"	"4"	"0.0145864762846222"
"serine-isocitrate lyase pathway"	"AraCyc"	"22"	"0.0260928565471844"	"4"	"0.128875995393483"
"sorbitol degradation"	"AraCyc"	"22"	"8.12241030677415e-08"	"4"	"0.0172015023192396"
"Translation factors"	"KEGG"	"22"	"0.0330321669602072"	"7"	"0.0222619720704736"
"starch degradation"	"AraCyc"	"21"	"1.01528324552563e-08"	"3"	"0.0101127795125071"
"Delta-pH pathway"	"BioPath"	"20"	"2.12323623658472e-19"	"2"	"0.000563759882359318"
"Regulatory enzymes"	"BioPath"	"20"	"8.74037183907473e-16"	"2"	"0.000563759882359318"
"SRP (signal recognition particle)-dependent pathway for integral membrane proteins"	"BioPath"	"20"	"7.95170644150689e-09"	"2"	"0.0093295674264467"
"glucose and glucose-1-phosphate degradation"	"AraCyc"	"20"	"1.84278155951819e-11"	"3"	"0.005823418295468"
"photorespiration"	"AraCyc"	"20"	"6.60349203100089e-05"	"7"	"0.000682354582370993"
"trehalose biosynthesis III"	"AraCyc"	"20"	"0.000296308180286076"	"3"	"0.121233847403428"
"Fructose and mannose metabolism"	"KEGG"	"20"	"0.0113519988876422"	"3"	"0.114539559443985"
"Galactose metabolism"	"KEGG"	"20"	"0.000165981360811025"	"3"	"0.0350021619790116"
"Glutathione metabolism"	"KEGG"	"20"	"0.0046983686586295"	"2"	"0.241819645340627"
"Streptomycin biosynthesis"	"KEGG"	"20"	"1.03476070144158e-10"	"3"	"0.00140160712738462"
"phytochromobilin biosynthesis"	"LitPath"	"20"	"1.81802909557415e-07"	"2"	"0.0154170999102040"
"ascorbic acid biosynthesis"	"BioPath"	"18"	"0.0239388357466332"	"4"	"0.0253969814389046"
"light harvesting complex"	"BioPath"	"18"	"1.44356263450810e-08"	"2"	"0.0093295674264467"
"psbP family of thylakoid proteins"	"BioPath"	"18"	"4.56057859518748e-16"	"5"	"3.05979430812342e-07"
"Sec (secretory) pathway"	"BioPath"	"18"	"3.07357222283677e-19"	"3"	"4.61819156179584e-05"
"oxidative branch of the pentose phosphate pathway"	"AraCyc"	"18"	"4.23796196781121e-10"	"3"	"0.005823418295468"
"xanthophyll cycle"	"AraCyc"	"18"	"0"	"2"	"0"
"photoinhibition"	"TAIR-GO"	"17"	"6.38552337397435e-16"	"2"	"0.000171453376501484"
"photosystem I"	"TAIR-GO"	"17"	"2.78807591110736e-10"	"2"	"0.0050800073789055"
"photosystem II"	"TAIR-GO"	"17"	"7.1617515691328e-13"	"2"	"0.00157717320414158"
"starch biosynthesis"	"TAIR-GO"	"17"	"8.79864008648865e-08"	"2"	"0.0050800073789055"
"glycosylglyceride desaturation pathway"	"AraCyc"	"17"	"1.73530953166298e-12"	"2"	"0.00081003826415854"
"mRNA synthesis "	"FunCat"	"17"	"7.80706469067536e-06"	"2"	"0.102016446455412"
"RNA synthesis "	"FunCat"	"17"	"7.80706469067536e-06"	"2"	"0.102016446455412"
"transcription"	"FunCat"	"17"	"1.91958565674773e-11"	"2"	"0.0188082373353899"
"transcriptional control"	"FunCat"	"17"	"2.64868522422042e-09"	"2"	"0.0120883621255717"
"protein folding"	"TAIR-GO"	"16"	"0"	"2"	"0"
"response to high light intensity"	"TAIR-GO"	"16"	"6.84130102184275e-15"	"2"	"0.000171453376501484"
"aspartate degradation I"	"AraCyc"	"16"	"0.0319142779406348"	"3"	"0.0662941903014248"
"mixed acid fermentation"	"AraCyc"	"16"	"0.0353118861920377"	"3"	"0.154175120448909"
"phenylalanine degradation I"	"AraCyc"	"16"	"0.00694507469293021"	"3"	"0.0743262772601173"
"TCA cycle variation II"	"AraCyc"	"16"	"2.08224611167261e-05"	"3"	"0.0160457798880771"
"Protein folding / chaperonins (chloroplast)"	"BioPath"	"14"	"0.00701150420259907"	"2"	"0.103743002942491"
"plastid organization and biogenesis"	"TAIR-GO"	"14"	"3.86353953459672e-12"	"2"	"0.000657733641793191"
"cysteine biosynthesis II"	"AraCyc"	"14"	"0.000156073353597021"	"6"	"0.000270130978053179"
"glycine biosynthesis I"	"AraCyc"	"14"	"0.0466621981190666"	"6"	"0.0127421885512525"
"isopentenyl diphosphate biosynthesis -- mevalonate-independent"	"AraCyc"	"14"	"4.81955658666215e-08"	"2"	"0.00370031972092226"
"serine biosynthesis"	"AraCyc"	"14"	"1.90363464647573e-09"	"6"	"2.53200733698719e-09"
"superpathway of serine and glycine biosynthesis II"	"AraCyc"	"14"	"0.000115929514675915"	"6"	"0.000197890458784391"
"Ascorbate and aldarate metabolism"	"KEGG"	"14"	"0.0121060905543991"	"2"	"0.0785328662062297"
"gamma-Hexachlorocyclohexane degradation"	"KEGG"	"14"	"0.000439104149517482"	"2"	"0.0293447455892338"
"amylopectin biosynthesis"	"TAIR-GO"	"13"	"8.81499553110191e-15"	"2"	"0.000171453376501484"
"pectin biosynthesis"	"TAIR-GO"	"13"	"8.81499553110191e-15"	"2"	"0.000171453376501484"
"Ferredoxin"	"BioPath"	"12"	"0.000104475978274624"	"3"	"0.00416012443581734"
"Translation (chloroplast)"	"BioPath"	"12"	"0.000104475978274624"	"3"	"0.00132085386252501"
"chloroplast organization and biogenesis"	"TAIR-GO"	"12"	"3.79172688458419e-09"	"2"	"0.00302583053296934"
"plastid large ribosomal subunit"	"TAIR-GO"	"12"	"0"	"2"	"0"
"protein biosynthesis"	"TAIR-GO"	"12"	"0"	"2"	"0"
"aspartate degradation II"	"AraCyc"	"12"	"0.010830814800825"	"2"	"0.0665136220615073"
"biosynthesis of pyrimidine ribonucleotides"	"AraCyc"	"12"	"0.00707918817311648"	"3"	"0.0451059248353847"
"sucrose biosynthesis"	"AraCyc"	"12"	"0.0243705343405742"	"2"	"0.113882794621600"
"transport "	"FunCat"	"12"	"2.48968664255424e-14"	"4"	"0"
"Pentose and glucuronate interconversions"	"KEGG"	"12"	"0.000114448643911727"	"2"	"0.0208322685176361"
"Protein folding and associated processing"	"KEGG"	"12"	"0.0057483811528718"	"3"	"0.0194370141382943"
"assimilation of ammonia, metabolism of the glutamate group"	"FunCat"	"11"	"0.0472040413174972"	"2"	"0.0555336128186403"
"C-compound, carbohydrate catabolism"	"FunCat"	"11"	"0.0415825746498972"	"3"	"0.0912244362326879"
"aspartate/ornithin cycle / nitric oxid from glutamate"	"BioPath"	"10"	"0.0362735432758455"	"1"	"0.325851308226869"
"brassinosteroid biosynthesis"	"BioPath"	"10"	"3.86732237990613e-05"	"1"	"0.0194316135598528"
"Plastocyanin"	"BioPath"	"10"	"2.81713823882330e-07"	"1"	"0.00685304444152381"
"Thylakoid biogenesis and photosystem assembly"	"BioPath"	"10"	"0.043876675959069"	"1"	"0.108993966635452"
"carotene biosynthesis"	"TAIR-GO"	"10"	"4.97531866579538e-07"	"1"	"0.00899653967253618"
"cellular response to phosphate starvation"	"TAIR-GO"	"10"	"0.00122733242492216"	"1"	"0.0698212655005441"
"chlorophyll catabolism"	"TAIR-GO"	"10"	"1.12528176253663e-06"	"1"	"0.00899653967253618"
"chloroplast-nucleus signaling pathway"	"TAIR-GO"	"10"	"1.12528176253663e-06"	"1"	"0.00899653967253618"
"enzyme binding"	"TAIR-GO"	"10"	"0"	"1"	"0"
"glucose metabolism"	"TAIR-GO"	"10"	"4.36538368500553e-05"	"1"	"0.0278407940360376"
"glycolipid biosynthesis"	"TAIR-GO"	"10"	"1.55055147253455e-05"	"1"	"0.0173353457032792"
"heme biosynthesis"	"TAIR-GO"	"10"	"0"	"1"	"0"
"hypersensitive response"	"TAIR-GO"	"10"	"0.000343985970251639"	"1"	"0.0402482757875716"
"lipid biosynthesis"	"TAIR-GO"	"10"	"0.000238952582507615"	"1"	"0.0278407940360376"
"pentose-phosphate shunt, oxidative branch"	"TAIR-GO"	"10"	"4.36538368500553e-05"	"1"	"0.0278407940360376"
"photorespiration"	"TAIR-GO"	"10"	"4.66012739097299e-06"	"2"	"0.00157717320414158"
"photosynthesis light harvesting"	"TAIR-GO"	"10"	"0.000915514530094206"	"1"	"0.0698212655005441"
"photosynthesis, dark reaction"	"TAIR-GO"	"10"	"0"	"1"	"0"
"photosystem II (sensu Viridiplantae)"	"TAIR-GO"	"10"	"1.64468826426333e-06"	"1"	"0.0173353457032792"
"phytochromobilin biosynthesis"	"TAIR-GO"	"10"	"1.12528176253663e-06"	"1"	"0.00899653967253618"
"protein binding"	"TAIR-GO"	"10"	"3.34288408308216e-06"	"1"	"0.0278407940360376"
"protein complex assembly"	"TAIR-GO"	"10"	"0"	"1"	"0"
"sulfolipid biosynthesis"	"TAIR-GO"	"10"	"1.32915362105484e-09"	"1"	"0.00311314880851305"
"tetrapyrrole binding"	"TAIR-GO"	"10"	"0"	"1"	"0"
"thylakoid membrane organization and biogenesis"	"TAIR-GO"	"10"	"0"	"1"	"0"
"xanthophyll cycle"	"TAIR-GO"	"10"	"0"	"1"	"0"
"xanthophyll metabolism"	"TAIR-GO"	"10"	"0"	"1"	"0"
"brassinosteroid biosynthesis II"	"AraCyc"	"10"	"0.000763335463308386"	"1"	"0.158742590280759"
"de novo biosynthesis of pyrimidine ribonucleotides"	"AraCyc"	"10"	"0.0338748996889591"	"2"	"0.141221839372882"
"galactose degradation I"	"AraCyc"	"10"	"5.81187075005272e-07"	"3"	"0.000379647276340268"
"glycosylglyceride biosynthesis"	"AraCyc"	"10"	"0.00388411879111461"	"1"	"0.0613602238456734"
"phospholipid desaturation pathway"	"AraCyc"	"10"	"0.000272931672533357"	"1"	"0.0316317987009821"
"pyridoxal 5'-phosphate biosynthesis"	"AraCyc"	"10"	"8.58481784452596e-08"	"1"	"0.0316317987009821"
"thiamine biosynthesis"	"AraCyc"	"10"	"1.31174715099566e-06"	"1"	"0.0455975381910121"
"energy"	"FunCat"	"10"	"4.17312748494190e-11"	"1"	"0.00511820486495046"
"lipid, fatty acid and isoprenoid metabolism of energy reserves (e.g. glycogen, trehalose)"	"FunCat"	"10"	"0"	"1"	"0"
"metabolism of energy reserves (e.g. glycogen, trehalose)"	"FunCat"	"10"	"0"	"1"	"0"
"nucleotide metabolism"	"FunCat"	"10"	"0"	"3"	"0"
"stress response"	"FunCat"	"10"	"0"	"2"	"0"
"1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradatio"	"KEGG"	"10"	"5.1376563013528e-05"	"1"	"0.0488496378333768"
"1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation"	"KEGG"	"10"	"4.44196954922585e-06"	"1"	"0.0220475378465875"
"Androgen and estrogen metabolism"	"KEGG"	"10"	"7.08663711761481e-06"	"1"	"0.0300523468880424"
"Benzoate degradation via hydroxylation"	"KEGG"	"10"	"0.00083785032214951"	"1"	"0.0594677256623728"
"Diterpenoid biosynthesis"	"KEGG"	"10"	"0.0250383739654111"	"1"	"0.0827473420166244"
"Fluorene degradation"	"KEGG"	"10"	"0.00863967613740951"	"1"	"0.121735775876151"
"Reductive carboxylate cycle (CO2 fixation)"	"KEGG"	"10"	"0.0211641977112077"	"2"	"0.0450378346340496"
"chlorophyll catabolism"	"LitPath"	"10"	"5.15238979708585e-05"	"1"	"0.0196744278122097"
"phytol biosynthesis"	"LitPath"	"10"	"0"	"1"	"0"
"carbohydrate biosynthesis"	"TAIR-GO"	"9"	"0"	"1"	"0"
"sucrose biosynthesis"	"TAIR-GO"	"9"	"0"	"1"	"0"
"histidine biosynthesis"	"AraCyc"	"9"	"0.0429219159446244"	"1"	"0.247987951468136"
"photosystem I reaction center"	"BioPath"	"8"	"0.0165849785509198"	"2"	"0.0325029656092614"
"Tic apparatus"	"BioPath"	"8"	"0.0017734965201197"	"2"	"0.0230553518847800"
"abscisic acid biosynthesis"	"TAIR-GO"	"8"	"0.034843890415699"	"1"	"0.104356647702923"
"carotenoid biosynthesis"	"TAIR-GO"	"8"	"0.0272376667125235"	"1"	"0.0698212655005441"
"regulation of transcription"	"TAIR-GO"	"8"	"1.60185928612007e-11"	"1"	"0"
"response to osmotic stress"	"TAIR-GO"	"8"	"1.86910723831308e-05"	"1"	"0.0173353457032792"
"response to water deprivation"	"TAIR-GO"	"8"	"0"	"1"	"0"
"sugar mediated signaling"	"TAIR-GO"	"8"	"0.00567833183634878"	"1"	"0.0402482757875716"
"xanthophyll biosynthesis "	"TAIR-GO"	"8"	"0"	"1"	"0"
"transport facilitation"	"FunCat"	"8"	"0"	"3"	"0"
"N-Glycan biosynthesis"	"KEGG"	"8"	"0.0139092213512301"	"1"	"0.164177163354251"
"fatty acid desaturation"	"TAIR-GO"	"7"	"0.000104162145912368"	"1"	"0.00899653967253618"
"one-carbon compound metabolism"	"TAIR-GO"	"7"	"0.000190857654576012"	"1"	"0.0173353457032792"
"photomorphogenesis"	"TAIR-GO"	"7"	"6.27967993287661e-06"	"1"	"0.00899653967253618"
"photosystem II assembly"	"TAIR-GO"	"7"	"2.46073163969804e-05"	"1"	"0.00899653967253618"
"photosystem II stabilization"	"TAIR-GO"	"7"	"3.69393971562403e-06"	"1"	"0.00311314880851305"
"folate biosynthesis"	"AraCyc"	"7"	"0.0344159628984471"	"1"	"0.202790365377147"
"HORMONE DATA SET"	"quantDE"	"0.625368"	"maxDE"	"1.6385466"	"HORMONE DATA SET"
"Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone)"	"BioPath"	"72"	"2.00945616112268e-26"	"9"	"7.31532824520226e-05"
"Cell Wall Carbohydrate Metabolism"	"BioPath"	"49"	"0.0459976564005913"	"10"	"0.325060295591443"
"C-compound and carbohydrate metabolism"	"FunCat"	"37"	"6.78371941458236e-06"	"6"	"0.0527431810738682"
"Chlorophyll biosynthesis and breakdown"	"BioPath"	"34"	"6.55552816265905e-15"	"5"	"0.000234342291224565"
"chlorophyll biosynthesis"	"AraCyc"	"34"	"7.19419822588322e-22"	"5"	"7.93490321646706e-05"
"chlorophyll and phytochromobilin metabolism"	"LitPath"	"34"	"6.00364623078152e-15"	"5"	"0.000101360743537836"
"biogenesis of chloroplast"	"FunCat"	"30"	"5.07229545193657e-15"	"4"	"0.00106220300958110"
"Porphyrin and chlorophyll metabolism"	"KEGG"	"30"	"6.64839567233754e-21"	"4"	"4.57167596968122e-05"
"Carotenoid biosynthesis"	"BioPath"	"28"	"1.96508047399617e-23"	"3"	"0.000159032124278945"
"carotenoid biosynthesis"	"AraCyc"	"28"	"9.29551490669451e-30"	"3"	"7.35640259051054e-06"
"carotenid biosynthesis"	"LitPath"	"28"	"1.40087962173342e-23"	"3"	"0.000102297694656327"
"Carotenoid and abscisic acid metabolism"	"LitPath"	"28"	"4.71444168784954e-17"	"3"	"0.00156792456087357"
"porphyrin biosynthesis"	"TAIR-GO"	"24"	"1.41503406862345e-18"	"4"	"9.66712856731477e-06"
"biosynthesis of proto- and siroheme"	"AraCyc"	"24"	"4.27979889278586e-15"	"4"	"0.000251140544065483"
"chlorophyll and phyochromobilin biosynthesis"	"LitPath"	"24"	"7.4118027007254e-19"	"4"	"1.25039471641743e-05"
"Starch and sucrose metabolism"	"KEGG"	"22"	"1.16745995167117e-06"	"3"	"0.0274931456660194"
"Leaf Glycerolipid Biosynthesis in Plastid"	"BioPath"	"20"	"0.00171838125422889"	"2"	"0.211408404920757"
"Synthesis of membrane lipids in plastids"	"AcylLipid"	"20"	"3.39373894206074e-16"	"2"	"0.000827037743329615"
"starch metabolism"	"BioPath"	"17"	"1.47439475570537e-06"	"3"	"0.00883551641647458"
"protein folding"	"TAIR-GO"	"16"	"0"	"2"	"0"
"cellulose biosynthesis"	"AraCyc"	"16"	"8.17630308061985e-08"	"3"	"0.00331374176045103"
"starch degradation"	"AraCyc"	"16"	"2.29815461822766e-14"	"2"	"0.00111132318564363"
"cellulose biosynthesis"	"BioPath"	"14"	"0.0027146401990093"	"3"	"0.0351142373568145"
"photosynthesis"	"TAIR-GO"	"14"	"7.05545966226847e-06"	"2"	"0.0130660991206746"
"photosystem I"	"TAIR-GO"	"14"	"1.74129849147248e-12"	"2"	"0.000506863034073156"
"photosystem II"	"TAIR-GO"	"14"	"1.20382727318712e-14"	"2"	"0.000150159710391499"
"Glycan Biosynthesis and Metabolism"	"KEGG"	"14"	"0.000245631981198113"	"3"	"0.0154379763160247"
"Glycerolipid metabolism"	"KEGG"	"14"	"3.71123645372381e-06"	"2"	"0.0136768331875509"
"mRNA processing in chloroplast"	"BioPath"	"12"	"2.69050137415599e-09"	"3"	"0.000233524669985993"
"lactose degradation IV"	"AraCyc"	"12"	"1.25767440986436e-16"	"2"	"9.27282151957122e-05"
"photosynthesis"	"FunCat"	"12"	"0.000112980309699733"	"2"	"0.0192775704817887"
"Galactose metabolism"	"KEGG"	"12"	"1.85301411168967e-05"	"2"	"0.0115154873016210"
"Miscellaneous acyl lipid metabolism"	"AcylLipid"	"12"	"0.0246223639648308"	"2"	"0.199648692001337"
"Other cell wall metabolism related enzymes"	"BioPath"	"10"	"5.16099045779499e-13"	"1"	"0.000768371649504185"
"Plastoquinone biosynthesis"	"BioPath"	"10"	"4.46210398900426e-17"	"1"	"0.000768371649504185"
"Protein folding / chaperonins (chloroplast)"	"BioPath"	"10"	"9.87770176011305e-06"	"1"	"0.0562911694776288"
"Tocopherol biosynthesis"	"BioPath"	"10"	"5.62282843838092e-08"	"1"	"0.00727452023589315"
"carotene biosynthesis"	"TAIR-GO"	"10"	"9.69459860627394e-11"	"1"	"0.00187725240944963"
"cell death"	"TAIR-GO"	"10"	"7.72126035811777e-09"	"1"	"0.00369334183374102"
"chaperone cofactor dependent protein folding"	"TAIR-GO"	"10"	"0"	"1"	"0"
"embryonic development"	"TAIR-GO"	"10"	"0.00198852699378613"	"1"	"0.0825621783345742"
"embryonic development (sensu Magnoliophyta)"	"TAIR-GO"	"10"	"7.99622186964812e-05"	"1"	"0.0476064085248984"
"fatty acid biosynthesis"	"TAIR-GO"	"10"	"0.00069585380059653"	"1"	"0.0540529294602096"
"meristem organization"	"TAIR-GO"	"10"	"7.70584911334814e-10"	"1"	"0.00605546324930736"
"photoinhibition"	"TAIR-GO"	"10"	"6.03581704053724e-11"	"1"	"0.00187725240944963"
"photosynthesis light harvesting"	"TAIR-GO"	"10"	"4.84362764308475e-07"	"1"	"0.0161442235815537"
"photosystem II (sensu Viridiplantae)"	"TAIR-GO"	"10"	"3.5450050173605e-10"	"1"	"0.00369334183374102"
"plastoquinone biosynthesis"	"TAIR-GO"	"10"	"9.27212760212382e-13"	"1"	"0.000636131324508504"
"response to cytokinin stimulus"	"TAIR-GO"	"10"	"2.6666610796764e-14"	"1"	"0.000636131324508504"
"root development"	"TAIR-GO"	"10"	"8.10211639756044e-17"	"1"	"0.000636131324508504"
"shoot development"	"TAIR-GO"	"10"	"8.10211639756044e-17"	"1"	"0.000636131324508504"
"systemic acquired resistance"	"TAIR-GO"	"10"	"2.99060379388046e-08"	"1"	"0.0123072786324034"
"vitamin E biosynthesis"	"TAIR-GO"	"10"	"7.72126035811777e-09"	"1"	"0.00369334183374102"
"xanthophyll cycle"	"TAIR-GO"	"10"	"0"	"1"	"0"
"xanthophyll metabolism"	"TAIR-GO"	"10"	"0"	"1"	"0"
"fatty acid biosynthesis -- initial steps"	"AraCyc"	"10"	"6.22782481254448e-05"	"1"	"0.0756055628942903"
"glycosylglyceride desaturation pathway"	"AraCyc"	"10"	"1.00521875073232e-11"	"1"	"0.00117953627120182"
"phospholipid desaturation pathway"	"AraCyc"	"10"	"3.64084706874265e-10"	"1"	"0.00194786762034089"
"plastoquinone biosynthesis"	"AraCyc"	"10"	"2.87492605744952e-13"	"1"	"0.00117953627120182"
"vitamin E biosynthesis"	"AraCyc"	"10"	"1.97759996136829e-09"	"1"	"0.00401595963949199"
"xanthophyll cycle"	"AraCyc"	"10"	"4.92241770425034e-16"	"1"	"0.000200250237514849"
"biosynthesis of vitamins, cofactors, and prosthetic groups"	"FunCat"	"10"	"1.34196427318065e-08"	"1"	"0.0139101664088572"
"lipid, fatty acid and isoprenoid metabolism"	"FunCat"	"10"	"0.000876295789198956"	"1"	"0.100435408580298"
"secondary metabolism"	"FunCat"	"10"	"0.00099875678694641"	"2"	"0.0431192003683666"
"1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradatio"	"KEGG"	"10"	"2.42729360504880e-09"	"1"	"0.00784485201155494"
"1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation"	"KEGG"	"10"	"1.50222313574916e-10"	"1"	"0.00336756243457005"
"Androgen and estrogen metabolism"	"KEGG"	"10"	"2.53431521936818e-10"	"1"	"0.00466793655246271"
"Benzoate degradation via hydroxylation"	"KEGG"	"10"	"6.87684474172728e-08"	"1"	"0.0097093498848703"
"Biosynthesis of steroids"	"KEGG"	"10"	"0.0408544929314372"	"1"	"0.157480226906867"
"Fatty acid biosynthesis (path 1)"	"KEGG"	"10"	"1.43863203868444e-06"	"1"	"0.0337634935314869"
"Propanoate metabolism"	"KEGG"	"10"	"9.26500527168363e-05"	"1"	"0.0771596706373277"
"Tetracycline biosynthesis"	"KEGG"	"10"	"1.33020059876318e-11"	"1"	"0.00137412792524252"
"chlorophyll a biosynthesis"	"LitPath"	"10"	"0"	"1"	"0"
"calmodulin binding"	"TAIR-GO"	"9"	"4.1818722492756e-05"	"1"	"0.0414692062652614"
"circadian rhythm"	"TAIR-GO"	"9"	"0"	"1"	"0"
"defense response"	"TAIR-GO"	"9"	"0.0148870534890012"	"1"	"0.0902839649138963"
"hypersensitive response"	"TAIR-GO"	"9"	"1.41210383068675e-06"	"1"	"0.00893573131859473"
"channel / pore class transport"	"FunCat"	"9"	"9.96209589049899e-09"	"1"	"0.0159175145354476"
"energy"	"FunCat"	"9"	"1.15752234354315e-14"	"1"	"0.000502653008438483"
"ion channels"	"FunCat"	"9"	"1.64223391992903e-08"	"1"	"0.0302928932532187"
"metabolism of energy reserves (e.g. glycogen, trehalose)"	"FunCat"	"9"	"2.92345176824877e-19"	"1"	"0"
"transport "	"FunCat"	"9"	"1.15752234354315e-14"	"1"	"0.000502653008438483"
"transport facilitation"	"FunCat"	"9"	"0"	"1"	"0.000502653008438483"
"Ion channels"	"KEGG"	"9"	"0.000155676216469936"	"1"	"0.173920595205460"
"Ligand-Receptor Interaction"	"KEGG"	"9"	"0.000196098435016640"	"1"	"0.185034368442258"
"Early light-inducible proteins"	"BioPath"	"8"	"5.4804184639112e-06"	"1"	"0.014731971824956"
"carotenoid biosynthesis"	"TAIR-GO"	"8"	"0.000107187642541367"	"1"	"0.0161442235815537"
"regulation of transcription"	"TAIR-GO"	"8"	"9.33669207213803e-15"	"1"	"0"
"starch biosynthesis"	"TAIR-GO"	"8"	"8.45560621180089e-05"	"1"	"0.0123072786324034"
"glucose and glucose-1-phosphate degradation"	"AraCyc"	"8"	"3.14158605686082e-07"	"1"	"0.0141186116448635"
"starch biosynthesis"	"AraCyc"	"8"	"0"	"1"	"0"
"trehalose biosynthesis II"	"AraCyc"	"8"	"0.0144623096710745"	"1"	"0.179569300303557"
"trehalose biosynthesis III"	"AraCyc"	"8"	"0.000524719144738111"	"1"	"0.0756055628942903"
"tRNA charging pathway"	"AraCyc"	"8"	"0.000306788572013144"	"4"	"0.000481585360786449"
"Aminoacyl-tRNA biosynthesis"	"KEGG"	"8"	"0.000229433348879026"	"4"	"0.000359695639925583"
"N-Glycan biosynthesis"	"KEGG"	"8"	"1.02670822918266e-05"	"1"	"0.0305073226797662"
"Pentose phosphate pathway"	"KEGG"	"8"	"0.00763081863312412"	"1"	"0.130850289065805"
"Streptomycin biosynthesis"	"KEGG"	"8"	"1.02670822918266e-05"	"1"	"0.0163375487958838"
"MUTANT DATA SET"	"quantDE"	"0.9608311"	"maxDE"	"9.831685232"	"MUTANT DATA SET"
"C-compound and carbohydrate metabolism"	"FunCat"	"265"	"0.000548666837370244"	"50"	"0.0792668147452194"
"Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone)"	"BioPath"	"252"	"5.00660232449839e-31"	"32"	"1.22328959971250e-06"
"Intermediary Carbon Metabolism"	"BioPath"	"216"	"7.55125344577172e-07"	"40"	"0.00418264057643603"
"Photosystems "	"BioPath"	"174"	"0.000114878175112881"	"22"	"0.164156911168952"
"biogenesis of chloroplast"	"FunCat"	"162"	"5.99303632700827e-30"	"25"	"6.13292708019033e-07"
"transport "	"FunCat"	"155"	"0"	"29"	"0"
"Chlorophyll biosynthesis and breakdown"	"BioPath"	"115"	"1.47569325055905e-18"	"14"	"0.000190164988494656"
"Pyruvate metabolism"	"KEGG"	"114"	"1.06074441189712e-05"	"17"	"0.0484108391787839"
"Isoprenoid Biosynthesis in the Cytosol and in Mitochondria"	"BioPath"	"112"	"0.00716883259288517"	"13"	"0.211393115635655"
"Carbon fixation"	"KEGG"	"112"	"2.06865223261864e-08"	"19"	"0.00372897988370339"
"chlorophyll and phytochromobilin metabolism"	"LitPath"	"109"	"3.90995869763944e-16"	"13"	"0.000473040302521456"
"Biosynthesis of steroids"	"KEGG"	"105"	"9.99563473251726e-07"	"11"	"0.0733479645847054"
"photosynthesis"	"FunCat"	"102"	"2.34918079554610e-16"	"15"	"0.000823732652877658"
"Glycolysis / Gluconeogenesis"	"KEGG"	"97"	"0.0123949245597079"	"17"	"0.0848174323198537"
"transport facilitation"	"FunCat"	"91"	"0"	"16"	"0"
"Oxidative phosphorylation"	"KEGG"	"87"	"9.49958885877095e-07"	"21"	"0.00320724406164399"
"additional photosystem II components"	"BioPath"	"86"	"1.87257399834562e-06"	"11"	"0.0317686432441826"
"Biosynthesis of prenyl diphosphates"	"BioPath"	"85"	"0.00128930566502587"	"10"	"0.140140221556704"
"chlorophyll biosynthesis"	"TAIR-GO"	"85"	"1.82017580811522e-30"	"9"	"2.01174970965413e-05"
"chlorophyll biosynthesis"	"AraCyc"	"84"	"5.83205760457708e-08"	"10"	"0.284034824957493"
"Citrate cycle (TCA cycle)"	"KEGG"	"78"	"1.43121711274847e-08"	"13"	"0.0052030152061532"
"Porphyrin and chlorophyll metabolism"	"KEGG"	"77"	"1.00654525250477e-10"	"9"	"0.00927756824212358"
"fatty acid biosynthesis"	"TAIR-GO"	"76"	"2.41158282295588e-26"	"9"	"5.0512973921892e-05"
"Chlorophyll a/b binding proteins"	"BioPath"	"72"	"5.90786965065576e-15"	"9"	"0.000548238965955764"
"TCA cycle -- aerobic respiration"	"AraCyc"	"70"	"7.86514280485633e-07"	"13"	"0.0244684250382159"
"TCA cycle variation VIII"	"AraCyc"	"68"	"7.94634728415004e-05"	"12"	"0.0699190046244672"
"sterol biosynthesis"	"BioPath"	"66"	"9.1553096781892e-06"	"7"	"0.0733709217342899"
"development"	"TAIR-GO"	"65"	"0.00380225535097443"	"8"	"0.205148464311050"
"gluconeogenesis"	"AraCyc"	"62"	"0.000313298710747532"	"11"	"0.077141085303363"
"IPP (isopentenyl diphosphate) and DMAPP (dimethylallyl diphosphat) biosynthesis"	"LitPath"	"61"	"1.65237662080287e-09"	"7"	"0.0131060037574810"
"serine-isocitrate lyase pathway"	"AraCyc"	"60"	"0.00188356902222847"	"10"	"0.143962595677114"
"Sulfur metabolism"	"KEGG"	"59"	"1.28108710363049e-06"	"8"	"0.0063859119147382"
"chlorophyll biosynthesis"	"LitPath"	"59"	"3.31703780379731e-23"	"6"	"0.000108548581750991"
"Calvin cycle"	"AraCyc"	"58"	"1.47164850522825e-06"	"11"	"0.0229537115199520"
"energy"	"FunCat"	"58"	"0"	"12"	"0"
"Selenoamino acid metabolism"	"KEGG"	"58"	"0.00078602280523684"	"7"	"0.11769603963954"
"Synthesis of fatty acids in plastids"	"AcylLipid"	"58"	"3.77055798564606e-07"	"9"	"0.0103524864694043"
"Methionin/SAM/ethylene metabolism from cysteine and aspartate"	"BioPath"	"56"	"0.000531479040514915"	"6"	"0.271436941966093"
"growth"	"TAIR-GO"	"56"	"1.22337453368587e-05"	"7"	"0.0587824610585469"
"acetyl-CoA assimilation"	"AraCyc"	"56"	"4.94652951977204e-06"	"10"	"0.0151500793269529"
"photorespiration"	"AraCyc"	"56"	"9.41551347561939e-12"	"11"	"0.00904277394422235"
"lipid, fatty acid and isoprenoid metabolism"	"FunCat"	"55"	"0.0297341559302049"	"8"	"0.203991187612523"
"Ascorbate and aldarate metabolism"	"KEGG"	"55"	"1.10177201769725e-05"	"7"	"0.0464276879013499"
"Cysteine metabolism"	"KEGG"	"53"	"0.000100205088932446"	"8"	"0.0274356112321722"
"mixed acid fermentation"	"AraCyc"	"52"	"1.34258207279840e-05"	"11"	"0.0116465033757068"
"sulfate assimilation III"	"AraCyc"	"52"	"0.0485787695226488"	"8"	"0.104216583096719"
"Glyoxylate and dicarboxylate metabolism"	"KEGG"	"52"	"3.30687286162529e-05"	"9"	"0.0123117368328042"
"Carotenoid and abscisic acid metabolism"	"LitPath"	"52"	"6.83726117555331e-06"	"6"	"0.0553559380317312"
"cysteine biosynthesis I"	"AraCyc"	"51"	"0.00070797996693328"	"11"	"0.0280980443439524"
"Synthesis of membrane lipids in endomembrane system"	"AcylLipid"	"51"	"0.00323697452183316"	"8"	"0.104305194151006"
"chlorophyll binding"	"TAIR-GO"	"50"	"3.03627577232369e-12"	"6"	"0.00423667316732083"
"sterol biosynthesis"	"TAIR-GO"	"50"	"6.59720890802005e-05"	"5"	"0.146830235363718"
"glyoxylate cycle"	"AraCyc"	"50"	"6.02024548120912e-07"	"8"	"0.0109966308866552"
"TCA cycle variation IV"	"AraCyc"	"50"	"0.0355435544298555"	"10"	"0.143962595677114"
"Pentose phosphate pathway"	"KEGG"	"50"	"0.0211276148523822"	"11"	"0.0328980432835252"
"Reductive carboxylate cycle (CO2 fixation)"	"KEGG"	"50"	"1.70022803369844e-09"	"8"	"0.00296039906069414"
"brassinosteroid biosynthesis"	"LitPath"	"50"	"0.00086444279808517"	"5"	"0.140194304177981"
"sterol and brassinosteroid biosynthesis"	"LitPath"	"50"	"1.03117481302776e-07"	"5"	"0.0314758574713637"
"Tryptophan metabolism"	"KEGG"	"49"	"5.50191632085227e-05"	"9"	"0.047803822772367"
"Protein folding / chaperonins (chloroplast)"	"BioPath"	"48"	"1.50463036209782e-15"	"7"	"0.00100118646417226"
"transported compounds (substrates)"	"FunCat"	"47"	"0"	"8"	"0"
"Carotenoid biosynthesis"	"BioPath"	"46"	"3.81697815709321e-11"	"5"	"0.00614540944389828"
"carotenoid biosynthesis"	"AraCyc"	"46"	"1.42085403876289e-12"	"5"	"0.00298524005165609"
"fatty acid biosynthesis -- initial steps"	"AraCyc"	"46"	"0.000497092842877647"	"7"	"0.178036953291036"
"carotenid biosynthesis"	"LitPath"	"46"	"1.92444015056583e-11"	"5"	"0.00531784351479907"
"fatty acid oxidation pathway"	"AraCyc"	"43"	"6.77034477967467e-05"	"5"	"0.0960666993028127"
"leucine biosynthesis"	"AraCyc"	"42"	"8.37330020361856e-17"	"8"	"0.000486603526384137"
"nucleotide metabolism"	"FunCat"	"42"	"0"	"10"	"0"
"Propanoate metabolism"	"KEGG"	"42"	"0.0118287098397112"	"7"	"0.11769603963954"
"unidimensional cell growth"	"TAIR-GO"	"41"	"5.32420133368165e-07"	"5"	"0.0201971505663218"
"lactose degradation IV"	"AraCyc"	"41"	"0"	"10"	"0"
"degradation "	"FunCat"	"41"	"1.76576391149753e-06"	"8"	"0.0162498810821599"
"Protein folding and associated processing"	"KEGG"	"41"	"0.000118460324731625"	"7"	"0.0575586913083991"
"ascorbic acid biosynthesis"	"BioPath"	"40"	"0.000591293406332878"	"6"	"0.0623744992313707"
"formaldehyde assimilation I (serine pathway)"	"AraCyc"	"40"	"0.0095812553875994"	"7"	"0.201659471753218"
"sterol biosynthesis"	"AraCyc"	"40"	"0.00761814777403383"	"4"	"0.258156999282009"
"Methionine metabolism"	"KEGG"	"40"	"0.000639607273389966"	"4"	"0.237023367219335"
"glycine biosynthesis I"	"AraCyc"	"39"	"0.00435659418135970"	"8"	"0.324557308042799"
"Pathway for nuclear-encoded, thylakoid-localized proteins"	"BioPath"	"38"	"5.83392422949691e-06"	"5"	"0.0166090700027088"
"protein biosynthesis"	"TAIR-GO"	"38"	"0"	"7"	"0"
"Fatty acid biosynthesis (path 1)"	"KEGG"	"38"	"9.07685690523405e-06"	"5"	"0.0850557911536562"
"ATP-dependent proteolysis"	"TAIR-GO"	"36"	"3.57659693250543e-17"	"9"	"3.77629419723551e-07"
"TCA cycle variation II"	"AraCyc"	"36"	"5.64053361498983e-08"	"7"	"0.00441335326928006"
"aerobic respiration"	"FunCat"	"36"	"2.97000936541256e-05"	"6"	"0.0053276619318691"
"respiration"	"FunCat"	"36"	"2.97000936541256e-05"	"6"	"0.0053276619318691"
"calmodulin binding"	"TAIR-GO"	"35"	"9.74848739767993e-09"	"4"	"0.0736446316041528"
"photorespiration"	"TAIR-GO"	"34"	"0"	"5"	"0"
"aerobic respiration -- electron donors reaction list"	"AraCyc"	"34"	"2.41066148887839e-06"	"10"	"0.000439464227423221"
"tryptophan biosynthesis"	"AraCyc"	"34"	"0.0323636629790982"	"6"	"0.150559724755888"
"Bile acid biosynthesis"	"KEGG"	"33"	"0.000194789372970114"	"5"	"0.039066039355104"
"Chloroplastic protein import via envelope membrane"	"BioPath"	"32"	"0.000489727724750291"	"7"	"0.0110355438914047"
"Chloroplastic protein turnover"	"BioPath"	"32"	"1.30359480063541e-09"	"8"	"2.09698082739267e-05"
"ClpP protease complex "	"BioPath"	"32"	"1.59682037633999e-20"	"8"	"1.58765578304958e-07"
"protein folding"	"TAIR-GO"	"32"	"0"	"4"	"0"
"response to UV"	"TAIR-GO"	"32"	"0.00165742749301854"	"4"	"0.0736446316041528"
"formylTHF biosynthesis"	"AraCyc"	"32"	"1.14335178894955e-05"	"6"	"0.0251365933914203"
"electron transport and membrane-associated energy conservation "	"FunCat"	"32"	"1.43677991413175e-15"	"7"	"3.34582062051392e-06"
"isoleucine degradation III"	"AraCyc"	"31"	"6.57606227836247e-08"	"5"	"0.00959539795196336"
"leucine degradation II"	"AraCyc"	"31"	"6.57606227836247e-08"	"5"	"0.00959539795196336"
"protein degradation "	"FunCat"	"31"	"4.78246146315291e-06"	"7"	"0.00623488983433548"
"Cyanoamino acid metabolism"	"KEGG"	"31"	"0.0154147209254765"	"5"	"0.234321241112905"
"MEP (methylerythritol P) pathway, plastids"	"LitPath"	"31"	"1.3593305048292e-07"	"4"	"0.0102240817367778"
"light harvesting complex"	"BioPath"	"30"	"1.34319792903097e-11"	"4"	"0.000870793511225214"
"brassinosteroid biosynthesis"	"TAIR-GO"	"30"	"0.00637452478737451"	"3"	"0.165116308971219"
"isoprenoid biosynthesis"	"TAIR-GO"	"30"	"2.18755838799477e-11"	"3"	"0.00487065551981101"
"phenylpropanoid metabolism"	"TAIR-GO"	"30"	"6.63130395648244e-09"	"3"	"0.0124901111644869"
"steroid biosynthesis"	"TAIR-GO"	"30"	"0.00637452478737451"	"3"	"0.165116308971219"
"aspartate degradation II"	"AraCyc"	"30"	"0.00138272685989286"	"5"	"0.0447572464233773"
"octane oxidation"	"AraCyc"	"30"	"0.000951604771480613"	"3"	"0.0787785539346981"
"superpathway of serine and glycine biosynthesis II"	"AraCyc"	"30"	"9.07293965496942e-06"	"7"	"0.0259468662152792"
"transport routes "	"FunCat"	"30"	"5.47545252823331e-05"	"6"	"0.0169908381264536"
"Benzoate degradation via hydroxylation"	"KEGG"	"30"	"1.64326227428766e-05"	"3"	"0.0715554064777106"
"mevalonate pathway, cytosol"	"LitPath"	"30"	"0.000351695486796776"	"3"	"0.106410882495025"
"Fluorene degradation"	"KEGG"	"29"	"0.0108140460087402"	"3"	"0.236643817900385"
"carotene biosynthesis"	"TAIR-GO"	"28"	"0"	"3"	"0"
"chloroplastic endopeptidase Clp complex"	"TAIR-GO"	"28"	"0"	"7"	"0"
"homocysteine and cysteine interconversion"	"AraCyc"	"28"	"8.1653194826316e-08"	"4"	"0.0181887705282680"
"N-Glycan biosynthesis"	"KEGG"	"28"	"0.00045367005830627"	"6"	"0.0214069202930232"
"regulation of transcription"	"TAIR-GO"	"27"	"0"	"3"	"0"
"response to pathogenic bacteria"	"TAIR-GO"	"27"	"2.49048882535895e-12"	"4"	"0.000208501097224960"
"galactose degradation I"	"AraCyc"	"27"	"2.55816058531130e-21"	"7"	"0"
"threonine degradation"	"AraCyc"	"27"	"1.53111654968686e-05"	"7"	"0.0193771340745205"
"photosystem II type I  chlorophyll a /b binding protein"	"BioPath"	"26"	"1.10207767423294e-12"	"3"	"0.000967855257069707"
"flower development"	"TAIR-GO"	"25"	"9.6181258547136e-10"	"3"	"0.00487065551981101"
"ascorbate glutathione cycle"	"AraCyc"	"25"	"0.0208101394347956"	"5"	"0.0447572464233773"
"valine degradation II"	"AraCyc"	"25"	"5.59315333265558e-05"	"6"	"0.0179884008980421"
"Membrane Transport"	"KEGG"	"25"	"0.0158620310201229"	"5"	"0.151374998549539"
"Delta-pH pathway"	"BioPath"	"24"	"0"	"3"	"0"
"isopentenyl diphosphate biosynthesis -- mevalonate-independent"	"AraCyc"	"24"	"1.48164823147308e-08"	"3"	"0.0100460975343164"
"1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradatio"	"KEGG"	"24"	"1.68868407580351e-05"	"3"	"0.0493178366292426"
"transcription"	"FunCat"	"23"	"7.7263549419256e-06"	"5"	"0.0160234101214239"
"Other ion-coupled transporters"	"KEGG"	"23"	"0.000110009933219644"	"4"	"0.0374761650074474"
"indoleacetic acid biosynthesis"	"TAIR-GO"	"22"	"2.20177909702038e-07"	"3"	"0.00487065551981101"
"photosystem I"	"TAIR-GO"	"22"	"4.69595888100505e-06"	"3"	"0.0249413217683057"
"glycine degradation I"	"AraCyc"	"22"	"2.31908488686774e-09"	"5"	"0.00139846381259222"
"methionine biosynthesis II"	"AraCyc"	"22"	"0.0161229430942463"	"3"	"0.175869150149626"
"oxidative branch of the pentose phosphate pathway"	"AraCyc"	"22"	"3.46542722599505e-05"	"7"	"0.000448820403435234"
"starch biosynthesis"	"AraCyc"	"22"	"0"	"3"	"0"
"biosynthesis of vitamins, cofactors, and prosthetic groups"	"FunCat"	"22"	"0.00778854572023719"	"3"	"0.176928246628122"
"C-compound and carbohydrate utilization "	"FunCat"	"22"	"0"	"5"	"0"
"proteasome regulatory particle, base subcomplex (sensu Eukaryota)"	"TAIR-GO"	"21"	"0.00557975774594627"	"3"	"0.094515543069721"
"cysteine biosynthesis II"	"AraCyc"	"21"	"0.0300558685446889"	"6"	"0.088806866857707"
"serine biosynthesis"	"AraCyc"	"21"	"1.72224580916019e-08"	"6"	"4.62509839579451e-06"
"stress response"	"FunCat"	"21"	"0"	"3"	"0"
"Cytochrome b6/f complex"	"BioPath"	"20"	"0.00110563307661363"	"2"	"0.202414646359389"
"mRNA processing in chloroplast"	"BioPath"	"20"	"0.0023982915564408"	"4"	"0.0453493120311166"
"Other cell wall metabolism related enzymes"	"BioPath"	"20"	"0"	"2"	"0"
"Toc apparatus"	"BioPath"	"20"	"0.00885102694218357"	"4"	"0.0308206970351384"
"Translation (chloroplast)"	"BioPath"	"20"	"2.46220856214656e-05"	"4"	"0.00260460287986434"
"chloroplast organization and biogenesis"	"TAIR-GO"	"20"	"1.77564424160937e-10"	"4"	"0.00106092769747307"
"glutathione biosynthesis"	"TAIR-GO"	"20"	"0"	"2"	"0"
"methionine biosynthesis"	"TAIR-GO"	"20"	"1.73365788487601e-07"	"2"	"0.0214933788092543"
"response to pathogenic fungi"	"TAIR-GO"	"20"	"5.40543229741562e-11"	"2"	"0.0062290436886202"
"glutathione biosynthesis"	"AraCyc"	"20"	"0"	"2"	"0"
"isoleucine biosynthesis I"	"AraCyc"	"20"	"0.00625354939269866"	"4"	"0.129159755927282"
"methionine degradation I"	"AraCyc"	"20"	"0.00273501088070619"	"2"	"0.244064472394972"
"phospholipid desaturation pathway"	"AraCyc"	"20"	"9.61224399520139e-05"	"2"	"0.0395107030492213"
"UDP-N-acetylglucosamine biosynthesis"	"AraCyc"	"20"	"3.16620108842785e-05"	"2"	"0.105523391477084"
"valine biosynthesis"	"AraCyc"	"20"	"0.00625354939269866"	"4"	"0.129159755927282"
"C-compound and carbohydrate glyoxylate cycle "	"FunCat"	"20"	"0"	"3"	"0"
"channel / pore class transport"	"FunCat"	"20"	"0.000849066972198944"	"3"	"0.212460291120458"
"glyoxylate cycle"	"FunCat"	"20"	"0"	"3"	"0"
"lipid transport "	"FunCat"	"20"	"4.71682769751877e-10"	"3"	"0.0271312423961333"
"1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation"	"KEGG"	"20"	"2.28371591167195e-05"	"2"	"0.0636780674332893"
"Androgen and estrogen metabolism"	"KEGG"	"20"	"5.25335204225193e-05"	"2"	"0.0978350126311252"
"phytochromobilin biosynthesis"	"LitPath"	"20"	"0.0078356359469911"	"2"	"0.104992891082828"
"hypersensitive response"	"TAIR-GO"	"19"	"0.000774107285930866"	"2"	"0.0803648163223516"
"folate biosynthesis"	"AraCyc"	"19"	"0.00337684743786028"	"3"	"0.214458046782053"
"detoxification"	"FunCat"	"19"	"0"	"4"	"0"
"carotenoid biosynthesis"	"TAIR-GO"	"18"	"0.0443953916488551"	"2"	"0.169446183067616"
"photosynthesis light harvesting"	"TAIR-GO"	"18"	"0.00830993824508534"	"2"	"0.169446183067616"
"signal transduction"	"TAIR-GO"	"18"	"0"	"2"	"0"
"4-hydroxyproline degradation"	"AraCyc"	"18"	"0.00519624322985654"	"4"	"0.0286699055438418"
"IAA biosynthesis I"	"AraCyc"	"18"	"0.0267115295622371"	"2"	"0.19447869685689"
"accessory proteins of electron transport and membrane-associated energy conservation"	"FunCat"	"18"	"0"	"3"	"0"
"metabolism of energy reserves (e.g. glycogen, trehalose)"	"FunCat"	"18"	"0"	"4"	"0"
"Fatty acid biosynthesis (path 2)"	"KEGG"	"18"	"0.017475883689263"	"3"	"0.0715554064777106"
"Tetracycline biosynthesis"	"KEGG"	"18"	"8.88912745818435e-06"	"2"	"0.0165932243601832"
"photoinhibition"	"TAIR-GO"	"17"	"7.25470007290799e-08"	"2"	"0.0062290436886202"
"glycosylglyceride desaturation pathway"	"AraCyc"	"17"	"2.82128919687732e-05"	"2"	"0.0181332294057815"
"methylglyoxal degradation"	"AraCyc"	"17"	"0.00516161401080272"	"3"	"0.214458046782053"
"electron / hydrogen transport "	"FunCat"	"17"	"6.3374598159873e-06"	"3"	"0.00761265142145828"
"Early light-inducible proteins"	"BioPath"	"16"	"0.0120605352476944"	"2"	"0.110346536751081"
"magnesium chelatase complex"	"TAIR-GO"	"16"	"0"	"2"	"0"
"PSII associated light-harvesting complex II"	"TAIR-GO"	"16"	"0"	"2"	"0"
"ascorbate biosynthesis"	"AraCyc"	"16"	"0.00135516185284664"	"2"	"0.19447869685689"
"glucose and glucose-1-phosphate degradation"	"AraCyc"	"16"	"0.0250455718249237"	"2"	"0.398454380000437"
"chloroplast transport "	"FunCat"	"16"	"0.0152347009464004"	"2"	"0.209167881366231"
"Limonene and pinene degradation"	"KEGG"	"16"	"7.24895501022322e-08"	"3"	"0.0089565647093375"
"Replication complex"	"KEGG"	"16"	"0.00144251653221399"	"4"	"0.0252820187940583"
"fatty acid desaturation"	"TAIR-GO"	"15"	"9.06171912917224e-07"	"2"	"0.0062290436886202"
"response to abiotic stimulus"	"TAIR-GO"	"15"	"0"	"2"	"0"
"response to oxidative stress"	"TAIR-GO"	"15"	"3.92937243235496e-06"	"3"	"0.00487065551981101"
"biosynthesis of secondary products derived from primary amino acids"	"FunCat"	"15"	"0.00201349992729178"	"3"	"0.113197968011363"
"Glycosphingolipid metabolism"	"KEGG"	"15"	"0.000397090351508873"	"3"	"0.0315076043802581"
"Sec (secretory) pathway"	"BioPath"	"14"	"1.38152752442863e-07"	"2"	"0.0191037181427621"
"lipid biosynthesis"	"TAIR-GO"	"14"	"0.0391005481720647"	"2"	"0.0464274637434192"
"photosystem II"	"TAIR-GO"	"14"	"0.0013354546676316"	"2"	"0.0464274637434192"
"biosynthesis of nonprotein amino acids"	"FunCat"	"14"	"2.68783749873475e-07"	"2"	"0.0146409952702462"
"polyprenyl diphosphate biosynthesis"	"LitPath"	"14"	"0.00341840706504595"	"2"	"0.147339087134681"
"one-carbon compound metabolism"	"TAIR-GO"	"13"	"0.000119129619607492"	"2"	"0.0214933788092543"
"phosphate transport"	"TAIR-GO"	"13"	"6.93956386105627e-05"	"2"	"0.0214933788092543"
"glutamate degradation I"	"AraCyc"	"13"	"0.0473355978954137"	"2"	"0.147833344761969"
"cytoplasmic and nuclear protein degradation"	"FunCat"	"13"	"3.51973806490962e-05"	"2"	"0.0146409952702462"
"transmembrane signal transduction"	"FunCat"	"13"	"1.48995736179537e-07"	"3"	"0.00290760234640436"
"Plastoquinone biosynthesis"	"BioPath"	"12"	"0"	"2"	"0"
"psbP family of thylakoid proteins"	"BioPath"	"12"	"0.000177892918894652"	"2"	"0.0723035474671073"
"Tic apparatus"	"BioPath"	"12"	"0.0051398739135808"	"3"	"0.0372186582950698"
"plastid organization and biogenesis"	"TAIR-GO"	"12"	"0.000333407597071254"	"2"	"0.0214933788092543"
"RNA processing"	"TAIR-GO"	"12"	"0"	"2"	"0"
"superpathway of gluconate degradation"	"AraCyc"	"12"	"0.0152290141305451"	"6"	"0.0123986754038460"
"thiamine biosynthesis"	"AraCyc"	"12"	"0.00144185783857517"	"2"	"0.068975308564126"
"energy conversion and regeneration "	"FunCat"	"12"	"2.08367354579562e-09"	"2"	"0.00416042156789379"
"1,2-Dichloroethane degradation"	"KEGG"	"12"	"1.89950210910436e-06"	"2"	"0.0165932243601832"
"Vitamin B6 metabolism"	"KEGG"	"12"	"0.019212838014154"	"3"	"0.0181354738361748"
"calcium-mediated signaling"	"TAIR-GO"	"11"	"1.20359915716084e-05"	"2"	"0.0062290436886202"
"brassinosteroid biosynthesis"	"BioPath"	"10"	"0.0225630004684912"	"1"	"0.0826569078910184"
"photosystem I subunit precursor"	"BioPath"	"10"	"0.00685844623514415"	"1"	"0.216003404205713"
"Regulatory enzymes"	"BioPath"	"10"	"0.0225630004684912"	"1"	"0.0826569078910184"
"Transcriptional regulators (chloroplast)"	"BioPath"	"10"	"0.000476507848016632"	"1"	"0.031220183282668"
"biotin binding"	"TAIR-GO"	"10"	"0.000332687655067380"	"1"	"0.033930985203845"
"carotenoid biosynthesis/TAS"	"TAIR-GO"	"10"	"0"	"1"	"0"
"cell communication"	"TAIR-GO"	"10"	"0"	"1"	"0"
"chlorophyll catabolism"	"TAIR-GO"	"10"	"0.0170557482056831"	"1"	"0.0893348682342947"
"chloroplast ATP synthase complex"	"TAIR-GO"	"10"	"0.000332687655067380"	"1"	"0.033930985203845"
"chloroplast-nucleus signaling pathway"	"TAIR-GO"	"10"	"0.0170557482056831"	"1"	"0.0893348682342947"
"cutin biosynthesis"	"TAIR-GO"	"10"	"0"	"1"	"0"
"cysteine biosynthesis"	"TAIR-GO"	"10"	"0.0170557482056831"	"1"	"0.0893348682342947"
"etioplast organization and biogenesis"	"TAIR-GO"	"10"	"0"	"1"	"0"
"glucosinolate catabolism"	"TAIR-GO"	"10"	"0.000180481100251823"	"1"	"0.033930985203845"
"glutathione metabolism"	"TAIR-GO"	"10"	"0"	"1"	"0"
"glycine catabolism"	"TAIR-GO"	"10"	"0"	"1"	"0"
"glyoxysome organization and biogenesis"	"TAIR-GO"	"10"	"0"	"1"	"0"
"methionine biosynthesis from L-homoserine via cystathione"	"TAIR-GO"	"10"	"0"	"1"	"0"
"methylation-dependent chromatin silencing"	"TAIR-GO"	"10"	"0"	"1"	"0"
"pectin biosynthesis"	"TAIR-GO"	"10"	"4.29946565616053e-05"	"1"	"0.0893348682342947"
"phytochromobilin biosynthesis"	"TAIR-GO"	"10"	"0.0170557482056831"	"1"	"0.0893348682342947"
"plastoquinone biosynthesis"	"TAIR-GO"	"10"	"0.000332687655067380"	"1"	"0.033930985203845"
"positive regulation of transcription"	"TAIR-GO"	"10"	"0.0129685391977753"	"1"	"0.0893348682342947"
"posttranscriptional gene silencing"	"TAIR-GO"	"10"	"0"	"1"	"0"
"protein binding"	"TAIR-GO"	"10"	"0.0350216422917915"	"1"	"0.231008953603279"
"protein complex assembly"	"TAIR-GO"	"10"	"0"	"1"	"0"
"response to cadmium ion"	"TAIR-GO"	"10"	"0"	"1"	"0"
"response to gravity"	"TAIR-GO"	"10"	"0"	"1"	"0"
"response to salicylic acid stimulus"	"TAIR-GO"	"10"	"0"	"1"	"0"
"RNA binding"	"TAIR-GO"	"10"	"0"	"1"	"0"
"thylakoid membrane organization and biogenesis"	"TAIR-GO"	"10"	"0"	"1"	"0"
"peptidoglycan biosynthesis"	"AraCyc"	"10"	"0.0452590815903912"	"1"	"0.416837292805762"
"plastoquinone biosynthesis"	"AraCyc"	"10"	"0.00806665421226266"	"1"	"0.141540960756984"
"proline biosynthesis I"	"AraCyc"	"10"	"0.0143566736382655"	"3"	"0.0350068026689421"
"pyridoxal 5'-phosphate biosynthesis"	"AraCyc"	"10"	"0.00192530416410183"	"1"	"0.209561132562160"
"biosynthesis of glycosides"	"FunCat"	"10"	"5.21440346555598e-05"	"1"	"0.06941247343874"
"degradation of lipids, fatty acids and isoprenoids"	"FunCat"	"10"	"0"	"1"	"0"
"detoxification by modification"	"FunCat"	"10"	"5.21440346555598e-05"	"1"	"0.06941247343874"
"fatty acid biosynthesis"	"FunCat"	"10"	"5.6783154356374e-08"	"1"	"0.0259111055248425"
"ionic homeostasis "	"FunCat"	"10"	"0"	"1"	"0"
"lipid, fatty acid and isoprenoid metabolism of energy reserves (e.g. glycogen, trehalose)"	"FunCat"	"10"	"0"	"1"	"0"
"metabolismn of primary metabolic sugars derivatives "	"FunCat"	"10"	"5.21440346555598e-05"	"1"	"0.06941247343874"
"regulation of nucleotide metabolism"	"FunCat"	"10"	"0"	"2"	"0"
"chlorophyll a biosynthesis"	"LitPath"	"10"	"0"	"1"	"0"
"chlorophyll catabolism"	"LitPath"	"10"	"0.0211525334790875"	"1"	"0.0796912970748849"
"diterpene biosynthesis"	"LitPath"	"10"	"0.000435325768614943"	"1"	"0.0299894430904375"
"phytol biosynthesis"	"LitPath"	"10"	"0"	"1"	"0"
"Tyr biosynthesis"	"LitPath"	"10"	"0"	"1"	"0"
"acetate metabolism"	"TAIR-GO"	"9"	"0"	"1"	"0"
"adenosine salvage"	"TAIR-GO"	"9"	"0.000562966725031987"	"1"	"0.033930985203845"
"DNA methylation"	"TAIR-GO"	"9"	"0"	"1"	"0"
"glutamate metabolism"	"TAIR-GO"	"9"	"0"	"1"	"0"
"glyoxylate cycle"	"TAIR-GO"	"9"	"0"	"1"	"0"
"induced systemic resistance, jasmonic acid mediated signaling pathway"	"TAIR-GO"	"9"	"0"	"1"	"0"
"jasmonic acid and ethylene-dependent systemic resistance"	"TAIR-GO"	"9"	"0.000562966725031987"	"1"	"0.033930985203845"
"jasmonic acid mediated signaling pathway"	"TAIR-GO"	"9"	"0"	"1"	"0"
"L-serine biosynthesis"	"TAIR-GO"	"9"	"0.000149281875461086"	"1"	"0.033930985203845"
"methylglyoxal catabolism"	"TAIR-GO"	"9"	"0.000562966725031987"	"1"	"0.033930985203845"
"negative regulation of signal transduction"	"TAIR-GO"	"9"	"0"	"1"	"0"
"negative regulation of transcription"	"TAIR-GO"	"9"	"0"	"1"	"0"
"nitrogen compound metabolism"	"TAIR-GO"	"9"	"0.0116447652503353"	"1"	"0.0893348682342947"
"nuclear heterochromatin"	"TAIR-GO"	"9"	"0"	"1"	"0"
"nuclear ubiquitin ligase complex"	"TAIR-GO"	"9"	"0"	"1"	"0"
"phosphoinositide-mediated signaling"	"TAIR-GO"	"9"	"0"	"1"	"0"
"phosphorylation"	"TAIR-GO"	"9"	"0"	"1"	"0"
"photomorphogenesis"	"TAIR-GO"	"9"	"0.000562966725031987"	"1"	"0.0893348682342947"
"pollen germination"	"TAIR-GO"	"9"	"0.0209158941294378"	"1"	"0.0893348682342947"
"pollen tube growth"	"TAIR-GO"	"9"	"0.00586830631698653"	"1"	"0.157176357659335"
"protein amino acid adenylylation"	"TAIR-GO"	"9"	"0"	"1"	"0"
"red, far-red light phototransduction"	"TAIR-GO"	"9"	"0"	"1"	"0"
"RNA interference, production of siRNA"	"TAIR-GO"	"9"	"0"	"1"	"0"
"seed germination"	"TAIR-GO"	"9"	"5.72304538760888e-08"	"1"	"0"
"sphingosine biosynthesis"	"TAIR-GO"	"9"	"0"	"1"	"0"
"sulfur metabolism"	"TAIR-GO"	"9"	"0"	"1"	"0"
"alanine degradation III"	"AraCyc"	"9"	"0.00081317550839602"	"1"	"0.0798370950813829"
"oxidation of fatty acids "	"FunCat"	"9"	"2.93462651357287e-07"	"1"	"0.0259111055248425"
"biosynthesis of extracellular lipids"	"LitPath"	"9"	"0"	"1"	"0"
"chloroplast stroma protein import"	"TAIR-GO"	"8"	"3.83090607828877e-05"	"2"	"0.0062290436886202"
"nitrate assimilation"	"TAIR-GO"	"8"	"0.0335746658539764"	"1"	"0.0893348682342947"
"nonphotochemical quenching"	"TAIR-GO"	"8"	"0.00281685087257397"	"1"	"0.033930985203845"
"photosystem I antenna complex"	"TAIR-GO"	"8"	"0"	"1"	"0"
"photosystem II antenna complex"	"TAIR-GO"	"8"	"0.00676984499645991"	"1"	"0.0893348682342947"
"response to high light intensity"	"TAIR-GO"	"8"	"0.0429943867189891"	"1"	"0.0893348682342947"
"transcription factor binding"	"TAIR-GO"	"8"	"0"	"1"	"0"
"accessory proteins of photosynthetic electron transport "	"FunCat"	"8"	"2.33783389550470e-05"	"1"	"0.0259111055248425"
"cell wall organization and biogenesis (sensu Magnoliophyta)"	"TAIR-GO"	"7"	"0.0166923286395447"	"1"	"0.0893348682342947"
"DNA-directed RNA polymerase II, holoenzyme"	"TAIR-GO"	"7"	"0"	"1"	"0"
"isopentenyl diphosphate biosynthesis, mevalonate-independent pathway"	"TAIR-GO"	"7"	"0"	"1"	"0"
"protein amino acid glycosylation"	"TAIR-GO"	"7"	"0"	"1"	"0"
"protein amino acid N-linked glycosylation via asparagine"	"TAIR-GO"	"7"	"0"	"1"	"0"
"response to water deprivation"	"TAIR-GO"	"7"	"0"	"2"	"0"
"systemic acquired resistance, salicylic acid mediated signaling pathway"	"TAIR-GO"	"7"	"0.00766475544277104"	"1"	"0.0893348682342947"
"rRNA synthesis "	"FunCat"	"7"	"0.000551089044319601"	"1"	"0.0259111055248425"