Co-Expression Analysis of: CYP98A3, C3'H (At2g4089) Institut de Biologie Moléculaire des Plantes




















































































































































































































































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Stress Data Set save heatmap as: OpenOffice Table annotation details for co-expressed genes can be found to the right of the heatmap


















































































































































































































































last updated: 30/01/06
MS Excel table





















































































































































































































































magnitude of change    0   0.3   0.6   0.9  1.2   1.5   1.8   2.1   2.4   2.7   >3 log2(treatment / control)













































































































































































































































greater than zero                                                         


















































































































































































































































less than zero                                                         















































































































































































































































Locus r-value Name Description Agrobacterium tumefaciens, tumor at stem (8) Myzus persicae, 8h, leaf (82) Gigaspora rosea, 3d, roots (23) Heterodera schachtii, 21d, roots (24) Pseudomonas syringae hrpA, 2h, Col5 leaf (71) P. syringae DC3000 avrRpm1, 4h, Col5 leaf (71) P. syringae DC3000, 4h, Col5 leaf (71) P. syringae hrpA, 4h, Col5 leaf (71) P. syringae DC3000, 12h, Col5 leaf (71) P. syringae hrpA, 12h, Col5 leaf (71) P. syringae DC3000, 2h, Col leaf (106) P. syringae DC3000, 6h, Col leaf (106) P. syringae DC3000, 24h, Col leaf (106) P. syringae avrRpm1, 2h, Col leaf (106) P. syringae avrRpm1, 6h, Col leaf (106) P. syringae avrRpm1, 24h, Col leaf (106) P. syringae HrcC, 2h, Col leaf (106) P. syringae HrcC, 6h, Col leaf (106) P. syringae HrcC, 24h, Col leaf (106) P. syringae pv. phaseolicola, 2h, Col leaf (106) P. syringae pv. phaseolicola, 6h, Col leaf (106) P. syringae pv. phaseolicola, 24h, Col leaf (106) P. syringae, resistant, 4h, Col leaf, uninfected half (148) P. syringae, resistant, 8h, Col leaf, uninfected half (148) P. syringae, resistant, 16h, Col leaf, uninfected half (148) P. syringae, resistant, 24h, Col leaf, uninfected half (148) P. syringae, resistant, 48h, Col leaf, uninfected half (148) P. syringae, susceptible, 4h, Col leaf, uninfected half (148) P. syringae, susceptible, 8h, Col leaf, uninfected half (148) P. syringae, susceptible, 16h, Col leaf, uninfected half (148) P. syringae, susceptible, 24h, Col leaf, uninfected half (148) P. syringae, susceptible, 48h, Col leaf, uninfected half (148) Erysiphe cichoracearum race UCSC, Col leaf (85) E. cichoracearum, 3h, Col leaf (86) E. cichoracearum, 10h, Col leaf (86) E. orontii, 6h, Col leaf (146) E. orontii, 12h, Col leaf (146) E. orontii, 18h, Col leaf (146) E. orontii, 24h, Col leaf (146) E. orontii, 48h, Col leaf (146) E. orontii, 72h, Col leaf (146) E. orontii, 96h, Col leaf (146) E. orontii, 120h, Col leaf (146) Botrytis cinerea, 18h, Col leaf (147) B. cinerea, 48h, Col leaf (147) Peronospora parasitica, resistant, 72h (72) P. parasitica, susceptible, 72h (72) Phytophtora infestans, 6h, Col seedling (108) P. infestans, 12h, Col seedling (108) P. infestans, 24h, Col seedling (108) elicitor flg22, Ler seedling (81) elicitor, control MgCl2, 1h, Col leaf (107) elicitor, control MgCl2, 4h, Col leaf (107) elicitor, GST, 1h, Col leaf (107) elicitor, GST, 4h, Col leaf (107) elicitor, hrpZ, 1h, Col leaf (107) elicitor, hrpZ, 4h, Col leaf (107) elicitor, GST NPP1, 1h, Col leaf (107) elicitor, GST NPP1, 4h, Col leaf (107) elicitor, flg22, 1h, Col leaf (107) elicitor, flg22, 4h, Col leaf (107) elicitor, LPS, 1h, Col leaf (107) elicitor, LPS, 4h, Col leaf (107) wounding, 15min, leaf (127) wounding, 30 min, leaf (127) wounding, 1h, leaf (127) wounding, 3h, leaf (127) wounding, 6h, leaf (127) wounding, 12h, leaf (127) wounding, 24h, leaf (127) wounding, 15min, root (127) wounding, 30 min, root (127) wounding, 1h, root (127) wounding, 3h, root (127) wounding, 6h, root (127) wounding, 12h, root (127) wounding, 24h, root (127) ozone, 1h, seedling (25) oxidative stress (paraquat), 30min, leaf (126) oxidative stress (paraquat), 1h, leaf (126) oxidative stress (paraquat), 3h, leaf (126) oxidative stress (paraquat), 6h, leaf (126) oxidative stress (paraquat), 12h, leaf (126) oxidative stress (paraquat), 24h, leaf (126) oxidative stress (paraquat), 30min, root (126) oxidative stress (paraquat), 1h, root (126) oxidative stress (paraquat), 3h, root (126) oxidative stress (paraquat), 6h, root (126) oxidative stress (paraquat), 12h, root (126) oxidative stress (paraquat), 24h, root (126) genotoxic stress (bleomycin), 30min, leaf (126) genotoxic stress (bleomycin), 1h, leaf (126) genotoxic stress (bleomycin), 3h, leaf (126) genotoxic stress (bleomycin), 6h, leaf (126) genotoxic stress (bleomycin), 12h, leaf (126) genotoxic stress (bleomycin), 24h, leaf (126) genotoxic stress (bleomycin), 30min, root (126) genotoxic stress (bleomycin), 1h, root (126) genotoxic stress (bleomycin), 3h, root (126) genotoxic stress (bleomycin), 6h, root (126) genotoxic stress (bleomycin), 12h, root (126) genotoxic stress (bleomycin), 24h, root (126) osmotic stress (mannitol), 30min, leaf (126) osmotic stress (mannitol), 1h, leaf (126) osmotic stress (mannitol), 3h, leaf (126) osmotic stress (mannitol), 6h, leaf (126) osmotic stress (mannitol), 12h, leaf (126) osmotic stress (mannitol), 24h, leaf (126) osmotic stress (mannitol), 30min, root (126) osmotic stress (mannitol), 1h, root (126) osmotic stress (mannitol), 3h, root (126) osmotic stress (mannitol), 6h, root (126) osmotic stress (mannitol), 12h, root (126) osmotic stress (mannitol), 24h, root (126) salt (NaCl), 30min, leaf (126) salt (NaCl), 1h, leaf (126) salt (NaCl), 3h, leaf (126) salt (NaCl), 6h, leaf (126) salt (NaCl), 12h, leaf (126) salt (NaCl), 24h, leaf (126) salt (NaCl), 30min, root (126) salt (NaCl), 1h, root (126) sal (NaCl), 3h, root (126) salt (NaCl), 6h, root (126) salt (NaCl), 12h, root (126) salt (NaCl), 24h, root (126) drought (excised leaves, laminar air flow), 2 h, leaf (58) drought (15 min dry air, then closed vessels ), 15min, leaf (126) drought (15 min dry air, then closed vessels ), 30min, leaf (126) drought (15 min dry air, then closed vessels ), 1h, leaf (126) drought (15 min dry air, then closed vessels ), 3h, leaf (126) drought (15 min dry air, then closed vessels ), 6h, leaf (126) drought (15 min dry air, then closed vessels ), 12h, leaf (126) drought (15 min dry air, then closed vessels ), 24h, leaf (126) drought (15 min dry air, then closed vessels ), 15min, root (126) drought (15 min dry air, then closed vessels ), 30min, root (126) drought (15 min dry air, then closed vessels ), 1h, root (126) drought (15 min dry air, then closed vessels ), 3h, root (126) drought (15 min dry air, then closed vessels ), 6h, root (126) drought (15 min dry air, then closed vessels ), 12h, root (126) drought (15 min dry air, then closed vessels ), 24h, root (126) freezing, recovery, 3h, leaf (58) freezing, recovery, 24h, leaf (58) cold (4°C), seedling (76) cold (4°C), 24h, (58) cold (4°C), 30min, leaf (126) cold (4°C), 1h, leaf (126) cold (4°C), 3h, leaf (126) cold (4°C), 6h, leaf (126) cold (4°C), 12h, leaf (126) cold (4°C), 24h, leaf (126) cold (4°C), 30min, root (126) cold (4°C), 1h, root (126) cold (4°C), 3h, root (126) cold (4°C), 6h, root (126) cold (4°C), 12h, root (126) cold (4°C), 24h, root (126) heat (30°C), 1h, seedling (59) heat (40°C), 1h, seedling (59) heat (55°C), 10min, 1h recovery, suspension cell (26) heat (38°C), 15min, leaf (126) heat (38°C), 30min, leaf (126) heat (38°C), 1h, leaf (126) heat (38°C), 3h, leaf (126) heat (38°C), 3h, 1h recovery, leaf (126) heat (38°C), 3h, 3h recovery, leaf (126) heat (38°C), 3h, 9h recovery, leaf (126) heat (38°C), 3h, 21h recovery, leaf (126) heat (38°C), 15min, root (126) heat (38°C), 30min, root (126) heat (38°C), 1h, root (126) heat (38°C), 3h, root (126) heat (38°C), 3h, 1h recovery, root (126) heat (38°C), 3h, 3h recovery, root (126) heat (38°C), 3h, 9h recovery, root (126) heat (38°C), 3h, 21h recovery, root (126) heat (38°C), 15min, suspension cell (126) heat (38°C), 30min, suspension cell (126) heat (38°C), 1h, suspension cell (126) heat (38°C), 3h, suspension cell (126) heat (38°C), 3h, 1h recovery, suspension cell (126) heat (38°C), 3h, 3h recovery, suspension cell (126) heat (38°C), 3h, 9h recovery, suspension cell (126) heat (38°C), 3h, 21h recovery, suspension cell (126) UV-B, 15min, leaf (126) UV-B, 30min, leaf (126) UV-B, 1h, leaf (126) UV-B, 3h, leaf (126) UV-B, 6h, leaf (126) UV-B, 12h, leaf (126) UV-B, 24h, leaf (126) UV-B, 15min, root (126) UV-B, 30min, root (126) UV-B, 1h, root (126) UV-B, 3h, root (126) UV-B, 6h, root (126) UV-B, 12h, root (126) UV-B, 24h, root (126) high light, leaf (95) low light, leaf (95) low light, 3h, petiole (13) Cs, 7d, leaf (97) bleomycin, 3d, whole plant (57) Norfluazone, whole seedling (98) Zn, whole rosette, A. halleri (101) Zn, whole roots, A_halleri (101) Zn, whole rosette, A. petrea (101) Zn, whole roots, A. petrea (101) zearalenone (c2t), 14d, seedlings (103) zearalenone (c4t), 14d, seedlings (103) Cs, 7d, root (97) t-zeatin, seedling (115) fumomisin, protoplast (62) syringolin, 10h, leaf (86) isoxaben, suspension cell (10) Locus Probeset Name Description Annotation score GO.keywords FunCat keywords AraCyc annotations KEGG annotations BioPath annotations AcylLipid category Literature annotations Gene family 90% quantile of DE max. DE




















At2g40890 1.000 C3'H, CYP98A3 encodes coumarate 3-hydroxylase (C3H), a P450-dependent monooxygenase. Involved in lignin biosynthesis. 0.56 -0.03 0.1 0.43 0.7 0.8 0.52 0.64 0.06 0.73 1.28 -0.41 0.12 0.77 0.46 0.25 1.07 0.69 0.69 1.27 1.34 1.09 -0.03 -0.19 0.11 -0.09 0.13 -0.09 -0.13 -0.35 -0.1 0.05 -0.2 -0.13 -0.42 0.13 0.26 0.11 0.14 0.23 0.1 0.33 0.2 -0.18 0.14 -0.26 -0.69 -0.51 0.27 -0.11 -0.27 -0.48 -0.16 0.33 0.41 0.9 1.33 0.46 0.93 0.93 0.9 -0.11 0.2 -0.34 -0.42 -0.17 -0.21 -0.13 0.1 0.18 -0.01 -0.1 0.07 0.02 -0.09 -0.21 -0.2 0.24 -0.52 -0.27 -0.16 -0.04 -0.22 -0.25 -0.28 0 -0.15 -0.26 -0.16 -0.33 -0.24 -0.25 0.13 -0.06 0.02 -0.18 -0.18 0.24 -0.15 0.11 -0.08 -0.03 -0.09 -0.14 -0.22 0.12 0.03 -0.49 -0.45 0.14 0.02 0.3 0.1 0.2 -0.17 -0.02 -0.08 0.1 -0.26 -0.59 -0.38 -0.14 -1.03 -1.13 -0.41 -0.34 -0.18 0.18 -0.18 -0.08 -0.16 -0.04 0.11 -0.16 -0.27 -0.22 0.66 -0.02 0.2 -0.02 -0.1 -0.33 0.23 0.33 -0.37 0.23 0.28 0.26 0.67 0.6 -1.44 -0.14 0.17 0.1 0.09 0.39 0.48 -0.79 -1.25 -0.4 0.16 -0.18 -0.46 -0.52 -0.1 -0.3 0.12 0.11 0.09 -0.34 -0.36 -0.74 -0.14 -0.2 0.07 0.14 -0.2 -0.48 -0.24 0.28 0.19 0.13 0.14 -0.07 -0.05 -0.11 0.5 0 -0.04 -0.14 -0.14 -0.02 -0.44 -0.4 -0.39 -0.09 -0.47 -0.01 -0.43 -0.01 0.08 0.16 0.37 -0.14 3.14 -2.54 -0.06 -0.86 -0.53 -0.45 -0.2 0.04 -0.34 -0.78 0.64 At2g40890 245101_at C3'H, CYP98A3 encodes coumarate 3-hydroxylase (C3H), a P450-dependent monooxygenase. Involved in lignin biosynthesis. 10 p-coumarate 3-hydroxylase activity | monooxygenase activity | phenylpropanoid biosynthesis | lignin biosynthesis
suberin biosynthesis | lignin biosynthesis | phenylpropanoid biosynthesis Ascorbate and aldarate metabolism | Stilbene, coumarine and lignin biosynthesis | gamma-Hexachlorocyclohexane degradation | Fluorene degradation Phenylpropanoid Metabolism | core phenylpropanoid metabolism
Phenylpropanoid pathway cytochrome P450 family, 3’-hydroxylase for p-coumaryl shikimic/quinic acids, phenylpropanoid metabolism 1.38 5.69




















At2g30490 0.753 C4H, CYP73A5 trans-cinnamate 4-monooxygenase / cinnamic acid 4-hydroxylase (C4H) (CA4H) / cytochrome P450 73 (CYP73A5) 0.43 -0.12 0.12 0.64 0.68 0.85 0.47 0.42 0.49 1.4 1.32 -0.75 1.05 1.01 0.69 1.64 1.25 0.66 1.91 1.44 1.56 2.23 0.05 -0.08 -0.07 -0.01 -0.28 -0.07 -0.15 -0.48 0.11 -0.13 -0.17 -0.5 -0.74 -0.28 -0.4 -0.67 -0.28 -0.05 -0.52 -0.25 0.06 -0.15 -0.06 -0.35 -0.5 0.34 -0.16 -0.39 -0.44 -0.64 -0.17 0.23 0.83 0.99 2.35 0.74 1.91 0.99 1.99 -0.18 0.56 -0.02 -0.46 0.13 0.21 -0.02 0.14 -0.09 -0.03 -0.19 0.19 -0.05 -0.13 -0.05 -0.33 0.55 -0.38 -0.25 -0.09 0 0.06 -0.13 -0.39 0.09 -0.1 -0.28 -0.32 -0.3 -0.24 -0.23 0.12 0.11 -0.17 -0.45 -0.32 0.26 -0.23 0.03 -0.2 -0.17 -0.34 -0.16 0.09 0.2 0.76 0.52 -0.47 0.08 0.17 0.41 0.3 0.22 -0.24 -0.1 0.23 0.51 0.49 0.36 -0.26 0.2 -0.39 -0.61 -0.22 -0.05 -0.3 0.28 -0.14 0.18 -0.01 0.08 -0.01 -0.37 0.09 -0.19 0.7 -0.03 0.15 -0.09 -0.4 0.7 0.46 0.23 0.6 0.13 0.2 0.38 0.88 -0.32 -2 -0.44 0.07 -0.4 -0.34 -0.36 -0.33 -0.28 -1.44 0.12 0.04 -0.41 -0.7 -0.49 -0.07 -0.49 0.03 -0.23 -0.07 -0.59 -0.15 -0.78 -0.25 -0.68 0.05 -0.25 -0.63 -0.99 -1.1 -0.89 -0.62 -0.63 -1.28 -0.93 -0.12 -0.34 0.57 0.33 -0.16 -0.22 -0.38 -0.01 -0.54 -0.03 0.79 0.52 -0.26 -0.28 -0.38 -0.73 -0.34 0.23 0.81 -0.34 2.34 -2.41 0.57 -1.83 -0.68 -0.4 -0.16 -0.09 -0.5 -1.14 -0.82 At2g30490 267470_at C4H, CYP73A5 trans-cinnamate 4-monooxygenase / cinnamic acid 4-hydroxylase (C4H) (CA4H) / cytochrome P450 73 (CYP73A5) 10 trans-cinnamate 4-monooxygenase activity | response to light | response to wounding | phenylpropanoid biosynthesis
suberin biosynthesis | lignin biosynthesis | phenylpropanoid pathway, initial reactions Phenylalanine metabolism | Stilbene, coumarine and lignin biosynthesis Phenylpropanoid Metabolism | core phenylpropanoid metabolism
Phenylpropanoid pathway cytochrome P450 family, cinnamic acid 4-hydroxylase, phenylpropanoid metabolism 2.07 4.76




















At5g24230 0.672
expressed protein -0.06 -0.06 0.1 -0.06 0.89 1.02 1.13 1.33 -0.06 1.55 1.25 -0.06 -0.06 0.84 -0.06 -0.06 1.11 1.36 1.27 0.97 1.77 1.07 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.14 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.62 -0.06 0.2 0.38 0.88 1.74 0.46 1.66 1.4 2.04 -0.46 0.18 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 0.02 0.28 0.01 0.15 -0.1 0.34 0.08 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.3 -0.09 0.48 -0.13 0.07 -0.3 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.48 -0.02 0.28 -0.27 -0.04 -0.09 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.43 -1.07 -0.9 -0.92 -0.66 -0.34 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.85 -1.18 -0.51 -0.53 -0.52 -0.21 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.86 -0.46 -0.52 -0.1 -0.63 -0.18 -0.28 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.16 0.05 0.2 -0.32 -0.51 -0.26 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.46 -0.36 -0.47 -0.51 0.1 -0.07 -0.45 -0.16 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.07 -0.35 -0.14 -0.38 -0.04 -0.37 0.11 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 2.11 -1.6 -0.06 -0.06 -0.06 -0.06 -0.51 -0.09 -0.06 -0.06 -0.06 At5g24230 249779_at
expressed protein 2

triacylglycerol degradation



pathogenesis-related lipase like 1.69 3.71




















At4g20460 0.668
NAD-dependent epimerase/dehydratase family protein, similar to UDP-galactose 4-epimerase from Cyamopsis tetragonoloba and Bacillus subtilis 1.22 NA -0.55 -1.35 1.05 1.25 1.17 1.45 1.83 2 1.92 -0.43 1.35 1.56 0.47 1.98 1.48 1.11 2 2.09 2.9 2.27 0.22 0.11 -0.07 0.28 -0.15 -0.04 0.51 -0.28 -0.13 0.18 -0.02 0.19 -0.5 -0.72 -0.21 -0.85 -0.63 -0.32 -0.25 -0.74 0.07 0.17 0.41 -0.27 -0.27 -0.27 -0.27 -0.27 -0.12 -0.28 0.34 0.34 0.99 1.98 3.5 1.64 3.04 2.17 3.78 -0.64 1.41 -0.14 -0.53 0.1 0.12 0.34 -0.22 -0.23 -0.1 -0.06 -0.67 -0.03 -0.52 -0.11 -0.25 -0.3 -0.63 -0.1 -0.15 -0.27 -0.09 -0.31 -0.38 -0.81 -0.27 -0.38 -0.66 -0.86 -0.82 -0.04 -0.15 -0.13 0.05 -0.3 -0.11 -0.17 0.12 -0.56 0 -0.07 -0.53 -0.01 0.2 -0.27 -0.45 -0.44 -0.73 -1.23 -0.65 -1.26 -1.41 -1.05 -0.37 -0.27 0.06 0.09 -0.27 0.03 -0.93 -1.43 -0.26 -0.37 -0.37 0.38 -0.36 -0.27 0.65 0.51 -0.05 -0.27 -0.27 -0.44 -0.43 -0.63 -0.59 0.01 -0.67 -0.3 -0.1 0.89 -0.17 0.25 -0.37 -0.53 -0.36 0.08 0.11 0.15 -0.28 0.01 -0.35 0.18 0.23 1.02 1.82 -0.49 -0.55 -0.16 -0.19 -0.53 0.26 0.36 -0.36 -0.27 -0.27 -0.35 -0.17 -0.48 -1.18 -1.74 -0.85 -0.24 -0.53 0.28 -0.9 -0.34 -0.43 0.57 -0.41 0.08 0.11 -0.61 0.22 -0.15 -0.61 0.11 0.03 -0.47 -0.22 -0.24 -0.34 -0.69 -0.15 -0.07 0 -0.34 -0.27 -0.27 -0.27 -0.27 -0.44 -0.52 3.22 -1.94 -0.96 -2.94 -1.3 -0.26 -0.7 -0.39 0.05 -0.11 0.66 At4g20460 254468_at
NAD-dependent epimerase/dehydratase family protein, similar to UDP-galactose 4-epimerase from Cyamopsis tetragonoloba and Bacillus subtilis 2
C-compound and carbohydrate utilization | biogenesis of cell wall GDP-D-rhamnose biosynthesis | colanic acid building blocks biosynthesis | dTDP-rhamnose biosynthesis | galactose degradation I | UDP-glucose conversion | lactose degradation IV




2.97 6.72




















At4g36220 0.614 FAH1, F5H, CYP84A1 encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis. -1.13 0.07 0.56 -0.05 0.26 0.16 0.27 0.28 0.15 1.18 1.19 -0.4 -0.74 0.8 0.09 0.76 1.34 1.06 0.41 1.25 0.84 1.05 -0.14 0.41 -0.01 0.08 -0.94 0.06 -0.65 -0.22 0.05 0.09 -0.03 -0.17 0.04 0.22 -0.39 -0.22 -0.17 0.01 -0.04 0.21 0.62 0.48 1.21 -0.19 0.52 1.64 2.41 1.23 -0.72 -0.01 0.44 0.28 0.77 0.24 1.41 0.01 1.41 0.47 1.3 0.51 0.66 -0.11 -0.31 -0.84 0.4 -0.01 0 -0.03 -0.05 -0.03 -0.05 -0.05 -0.05 0.32 -0.05 0.15 -0.09 0.05 -0.14 -0.5 -0.31 -0.04 0.18 0.11 -0.05 -0.05 -0.24 -0.05 -0.52 -0.19 0.14 -0.27 -0.28 0.1 0.14 -0.2 -0.05 -0.4 -0.05 -0.45 -0.17 -0.1 1.17 1.25 0.77 0.9 -0.03 -0.05 -0.05 -0.05 -0.05 -0.05 -0.27 -0.21 -0.14 -0.08 -0.87 -0.78 -0.03 -0.05 -0.27 -0.05 -0.05 -0.2 -0.75 0.32 -0.07 -0.35 -0.02 -0.08 0.2 0 -0.05 -0.03 -0.05 -0.05 -0.05 -0.05 -0.05 -0.56 0.26 0.49 0.34 0.08 -0.16 -0.06 0.1 -0.74 -1.28 0.03 -0.05 -0.05 -0.05 -0.05 -0.05 -1.27 -2.23 -0.05 0.05 0.16 -1.05 -1.09 -0.86 -0.06 -0.44 0.09 -0.05 -0.03 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.11 -0.08 -0.05 -0.05 -0.07 -0.05 -0.36 -0.11 -0.41 -0.51 0.71 0.88 0.36 -1.11 0.17 -0.56 0.46 0.2 -0.03 3.34 -2.41 -2.08 -2.43 -2 -0.42 -0.71 0.61 0.15 -1.92 -0.05 At4g36220 253088_at FAH1, F5H, CYP84A1 encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis. 10 monooxygenase activity | ferulate 5-hydroxylase activity | lignin biosynthesis | phenylpropanoid biosynthesis biosynthesis of secondary products derived from L-phenylalanine and L-tyrosine | biosynthesis of phenylpropanoids | biogenesis of cell wall lignin biosynthesis Ascorbate and aldarate metabolism | Stilbene, coumarine and lignin biosynthesis | gamma-Hexachlorocyclohexane degradation | Fluorene degradation Phenylpropanoid Metabolism | core phenylpropanoid metabolism
Phenylpropanoid pathway cytochrome P450 family, 5-hydroxylase for coniferaldehyde, coniferyl alcohol and ferulic acid, phenylpropanoid metabolism 2.26 5.77




















At3g06350 0.597
dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative 1.37 -0.63 -0.27 0.31 0.6 0.71 0.36 0.5 0.73 0.92 1.45 0.26 1.06 1.14 0.37 0.69 1.21 0.75 0.95 1.32 1.19 1.22 -0.26 -0.16 0.14 -0.03 -0.25 0.01 -0.09 -0.07 0.08 0.16 0 -0.16 -0.24 -0.15 -0.32 -0.01 -0.17 -0.11 0.04 0.2 0.12 0.32 0.63 -0.6 -0.35 0.49 0.53 0.09 -0.18 -0.35 0.26 0.06 0.63 0.41 1.31 0.33 1.12 0.55 1.39 0.03 0.43 0.33 -0.26 -0.42 -0.04 0.4 0.23 0.05 0.17 -0.03 -0.08 -0.2 -0.06 -0.16 -0.22 0.48 -0.11 -0.16 0.02 0.26 -0.02 -0.1 -0.09 0.09 -0.25 -0.2 -0.11 -0.12 -0.24 -0.28 -0.03 0.21 -0.02 -0.27 -0.09 0.1 -0.13 -0.02 -0.07 0.01 -0.23 -0.28 -0.07 -0.13 -0.48 -1.33 -0.33 -0.11 -0.34 -0.27 -0.59 -0.34 -0.23 -0.37 -0.46 -0.09 -0.15 -0.32 -0.16 -0.1 -0.81 -0.99 -0.87 -0.45 -0.22 0.38 -0.25 -0.34 0.06 0.36 0.07 -0.41 -0.11 -0.23 0.02 -0.14 0.28 0.08 -0.09 -0.08 0.51 0.38 -0.23 -0.11 -0.4 0.22 0.54 -0.26 -0.91 -0.16 -0.4 -0.45 -0.41 -0.63 -1.01 -0.69 -0.45 0.15 0.33 -0.36 -0.56 -0.34 0.03 0.05 -0.15 -0.16 0.14 -0.2 -0.05 -0.76 -0.08 -0.27 0.16 -0.01 -0.43 -0.33 -0.62 -0.95 -0.89 -0.33 -0.03 -0.45 0.02 -0.06 0.15 0.5 0.12 0.01 -0.28 0.32 -0.17 -0.62 0.71 1.03 0.2 -0.15 -0.21 0 -0.02 0.07 -0.57 0.65 0.63 -0.83 -0.84 0.51 0.04 -0.34 -0.31 0.09 -0.19 -0.33 -0.1 At3g06350 258908_at
dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative 4

chorismate biosynthesis
Phenylpropanoid Metabolism | Aromatic amino acid (Phe, Tyr, Trp) metabolism
Shikimate pathway | chorismate biosynthesis
1.75 2.78




















At1g52760 0.575
esterase/lipase/thioesterase family protein, low similarity to monoglyceride lipase from (Homo sapiens, Mus musculus) 0.68 0 0.13 -0.25 0.4 0.41 0.07 0.32 0.32 0.61 1.42 0.05 0.82 1 0.14 0.56 1.28 0.59 1.23 1.32 1.05 1.49 0.1 -0.06 0.27 0.28 -0.07 0.02 -0.05 -0.06 0.38 0.08 0.23 -0.15 -0.64 0.12 -0.17 -0.18 0.03 -0.04 0.06 0.27 0.19 0.13 0.52 -0.31 -0.03 0.06 0.6 0.13 -0.09 -0.55 0.28 0.07 0.74 0.41 1.18 0.16 1.13 0.59 0.79 -0.11 0.62 -0.19 -0.24 -0.41 0.28 0.14 0.36 -0.11 -0.28 0.03 0.04 0.02 0.04 -0.54 -0.09 0.46 -0.19 -0.28 0.04 0.28 -0.14 -0.12 -0.09 0.01 -0.46 -0.15 -0.08 -0.16 -0.23 -0.24 -0.18 0.03 -0.13 -0.28 -0.11 0.13 -0.45 -0.28 -0.4 -0.23 0.02 -0.32 0.23 0.77 0.53 0.53 -0.36 -0.45 -0.85 -0.56 -0.48 -0.13 -0.08 -0.12 0.1 0.75 0.36 0.26 -0.42 -0.45 -0.95 -1.59 -0.65 -0.54 -0.32 0.37 -0.09 -0.6 0.24 0.3 0.18 -0.17 -0.42 -0.3 0.19 -0.03 0.15 -0.25 -0.02 -0.24 0.34 0.23 -0.27 0.36 -0.36 0.07 0.48 -0.11 -0.76 -0.15 -0.03 -0.16 -0.08 -0.57 -1.12 -0.56 -0.44 -0.02 0.38 -0.04 -0.79 -0.79 0.66 0.8 0.28 0.23 -0.13 -0.37 -0.44 -0.92 0.26 -0.2 -0.2 0.08 -0.07 -0.13 -0.35 -1.13 -0.69 -0.53 -1 -0.86 -0.01 -0.31 0.06 -0.2 -0.14 -0.21 -0.12 0.43 -0.06 -0.49 0.15 1.1 0.15 0.18 -0.16 -0.25 0.1 0.56 0.21 0.07 0.56 -0.91 0.03 0.45 -0.84 0.16 -0.03 0.24 -0.33 -2.34 0.08 At1g52760 260153_at
esterase/lipase/thioesterase family protein, low similarity to monoglyceride lipase from (Homo sapiens, Mus musculus) 2




Degradation of storage lipids and straight fatty acids

1.61 3.83




















At3g19450 0.562 CAD4 Encodes a catalytically active cinnamyl alcohol dehydrogenase which uses p-coumaryl aldehyde as a preferred substrate. It can also use caffeyl, coniferyl and d-hydroxyconiferyl aldehydes as substrates. 0.84 0.27 0.17 0.69 0.53 -0.16 0.56 0.96 -0.86 0.87 1.27 -0.53 -2.49 0.25 -1.26 -0.82 0.96 1.03 0.94 0.77 1.05 1.07 0.41 -0.17 -0.03 0.04 0.39 0.04 -0.12 -0.3 -0.32 0.28 0.11 -0.05 -0.54 0.15 0.17 -0.04 0.09 0.21 0.27 0.72 0.8 -0.35 -0.92 0.31 0.11 -0.65 0.27 0.21 0 0.12 0.41 0.07 0.53 0.02 0.24 -0.15 0.18 0.05 0.83 -0.01 0.3 -0.11 -0.13 -0.78 -0.16 -0.04 0.23 0.07 0.23 -0.04 -0.32 0.26 0.02 0.13 -0.09 -0.4 0 0.16 0.33 0.38 0.2 0.09 0.2 -0.02 0.37 0.08 0.07 -0.11 -0.06 0.04 0.68 0.47 0.44 0.39 -0.01 -0.07 0.56 -0.06 0.16 0.17 0.27 0.22 -0.36 -0.82 -1.69 -1.91 -0.06 -0.2 -0.43 -0.64 -0.83 -1.26 0.33 0.38 0.16 0.28 -0.72 -1.18 -0.06 -0.25 -1.26 -2.33 -1.06 -1.01 0.21 0.93 0.14 0.38 -0.13 -0.09 0.39 0.32 0.23 -0.05 -0.23 0.08 -0.11 0.38 0.06 -0.79 -0.87 0.8 0.25 0.31 0.82 1.21 2.21 0.84 -1.01 0.35 0.34 0.64 0.02 -0.33 -0.33 -1.26 -0.56 0.17 0.26 -0.12 -0.81 -1.57 -1.42 0.07 0.48 0.26 0.2 0.17 -0.43 -0.96 -0.52 -0.24 -0.35 -0.21 0.28 0.13 -0.19 -1.63 -0.96 -0.2 -0.22 0.02 0.23 0.07 0.62 0.86 0.25 0.16 0.42 0.56 0.3 0.75 0.46 0.63 0.24 0.68 -1.04 -0.03 -0.4 0.31 0.5 0.33 3.14 -2 0.3 -0.91 -0.94 0.05 -0.04 0.42 -0.25 -1.12 -0.57 At3g19450 258023_at CAD4 Encodes a catalytically active cinnamyl alcohol dehydrogenase which uses p-coumaryl aldehyde as a preferred substrate. It can also use caffeyl, coniferyl and d-hydroxyconiferyl aldehydes as substrates. 10 cinnamyl-alcohol dehydrogenase activity | lignin biosynthesis
lignin biosynthesis Stilbene, coumarine and lignin biosynthesis Phenylpropanoid Metabolism | core phenylpropanoid metabolism
Phenylpropanoid pathway
2.14 5.62




















At4g30190 0.558 AHA2 belongs to the P-type ATPase superfamily of cation-transporting ATPases, pumps protons out of the cell, generating a proton gradient that drives the active transport of nutrients by proton symport. 2.04 -0.17 0.47 -1.1 0.66 0.55 0.87 0.92 0.55 1.32 1.35 0.01 0.97 1.27 0.37 1.25 1.46 0.99 2.06 1.27 1.17 2.02 -0.05 -0.11 -0.41 -0.17 -0.2 0.19 -0.09 -0.41 -0.37 -0.03 0.42 -0.15 -0.61 0.13 0.08 0.11 -0.21 -0.06 0.19 0.53 0.68 0.02 0.67 0.23 0.97 -0.34 -0.24 -0.41 -0.27 0.13 0.22 0.17 0.66 0.16 1.45 0.18 1.5 0.26 1.6 0.24 0.66 0.69 -0.18 0.02 0.43 -0.08 0.17 0.94 0.06 0.12 0.08 0.14 -0.09 -0.03 -0.06 -1.12 0.07 -0.11 0.31 0.06 0.12 0.67 -0.13 0.1 0.26 -0.16 -0.02 -0.18 -0.07 -0.14 -0.02 -0.34 0.02 0.56 -0.2 -0.07 0 -0.09 -0.16 0.1 0.21 -0.36 -0.43 -2.31 -1.09 -0.31 -0.14 -0.35 -0.64 -0.49 -0.56 -0.42 0.05 -0.11 -0.92 -0.87 -0.3 0.72 -0.04 -0.1 -1.24 -1.2 -0.54 -0.46 -0.13 1.12 0.42 -0.21 -0.52 -0.56 -0.12 0.22 -0.06 -0.13 -0.35 -0.16 -0.16 -0.14 -0.03 -0.18 0.57 0.49 -0.1 0.24 -0.7 -0.12 -0.52 -1.08 0.31 0.01 -0.01 -0.03 -0.13 -0.1 -0.32 -1.21 -0.13 0.4 0.66 0.28 -0.76 -1.88 -0.56 0.03 0.06 0.39 0 -0.01 -0.2 -0.56 -0.28 -0.27 -0.11 0.04 -0.43 -0.69 -1.06 -0.92 -0.54 -0.91 -0.61 -0.22 -0.19 -0.18 -0.18 -0.31 -0.16 -0.31 -0.05 0.56 0.24 -0.9 -0.94 -0.43 -0.46 0.26 -0.3 0.22 0.32 -0.03 0.02 -0.08 2.23 -1.46 -0.45 -0.32 -0.34 -0.44 0.08 0.24 -0.21 -2.54 0.56 At4g30190 253609_at AHA2 belongs to the P-type ATPase superfamily of cation-transporting ATPases, pumps protons out of the cell, generating a proton gradient that drives the active transport of nutrients by proton symport. 9 hydrogen-exporting ATPase activity, phosphorylative mechanism | nutrient import transport facilitation | transport ATPases | eukaryotic plasma membrane / membrane attached
Oxidative phosphorylation



2.33 4.77




















At4g34050 0.551 CCOMT caffeoyl-CoA 3-O-methyltransferase 0.48 0.1 0.34 0.04 0.31 0.36 0.13 0.25 0.03 0.92 1.07 -0.77 -0.01 0.76 0.59 0.38 0.99 0.56 0.76 1.14 0.75 0.81 0.12 0.28 0.23 0.19 -0.24 0.21 0.13 -0.12 0.44 0.13 0.08 -0.17 -0.25 -0.48 -0.03 0.01 -0.17 -0.04 -0.15 -0.18 -0.14 0.21 0.34 -0.3 0.28 -0.46 -0.15 0.21 -0.19 -0.13 0.21 -0.09 0.44 -0.12 1.04 -0.17 0.86 0.01 0.8 -0.2 0.5 -0.12 0.02 -0.08 -0.22 -0.21 -0.07 -0.01 -0.28 0.37 -0.03 0.02 0.01 -0.36 -0.01 0.41 -0.01 0.15 0.02 -0.11 -0.16 0.08 0.18 -0.17 -0.21 -0.23 0.06 0.01 -0.08 -0.25 0.16 0.03 -0.18 -0.05 0.12 -0.1 -0.17 0.18 -0.06 0.22 0.05 -0.08 0.4 0.21 0.17 0.28 0.17 0.01 -0.19 0.18 0.18 0.09 0.23 0.21 0.67 0.79 0.47 0.66 0.15 -0.17 -0.69 -0.9 -0.07 -0.15 0.3 0.07 0.39 0.16 -0.04 -0.08 -0.06 0 -0.47 0.15 0.05 -0.06 0.42 -0.02 0.13 -0.02 0.01 0.39 0.48 0.14 0.42 0.28 0.37 -0.06 -0.63 0.19 -0.17 0.28 0.18 -0.09 0.18 -0.42 -0.07 -0.98 0.18 0.05 -0.62 -1.54 -0.42 -0.21 -0.16 0.35 -0.32 0.06 -0.34 -1.62 -0.8 -0.13 -0.14 0.07 0.05 -0.43 -0.81 -1.62 -1.32 -1.43 -1.64 -1.42 -0.09 0.28 0.1 0.28 0.03 -0.15 0.08 -0.04 0.18 0.04 0.37 0.27 -0.39 0.07 0.15 0.1 -0.57 0.16 0.48 -0.28 1.61 -1.38 0.2 -0.21 -0.53 -0.51 0.15 -0.2 -0.21 -1.34 -0.38 At4g34050 253276_at CCOMT caffeoyl-CoA 3-O-methyltransferase 10
biogenesis of cell wall suberin biosynthesis | lignin biosynthesis Stilbene, coumarine and lignin biosynthesis

Phenylpropanoid pathway Methyltransferase, CCOMT like 1.60 3.25




















At5g48930 0.551 HCT Hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase -0.21 0.09 0.24 0.33 0.33 0.63 0.12 0.27 -0.25 0.85 0.65 -0.97 -0.54 0.37 0.56 -0.25 0.66 0.31 0.52 0.78 0.79 0.55 -0.24 -0.23 -0.3 -0.23 -0.2 -0.27 -0.12 -0.47 -0.23 -0.26 -0.04 -0.26 -0.46 -0.03 0.17 0.07 -0.14 0.18 0.28 0.28 0.33 -0.31 -0.09 0 0.43 -0.4 0.35 -0.33 -0.4 -0.35 0.06 0.01 0.59 0.07 1.03 -0.09 0.88 0.15 0.75 0.06 0.33 -0.31 -0.34 0.16 -0.28 -0.4 -0.14 -0.26 0.19 0.15 0.48 0.09 0.14 -0.03 0.14 0.64 -0.41 0 0.42 0.19 0.01 -0.17 0.15 0.28 -0.27 -0.08 0.03 0.18 -0.28 -0.04 0.46 -0.07 -0.39 -0.67 0.21 0.59 -0.25 0.31 -0.11 0.19 -0.28 -0.18 -0.16 -0.31 -0.23 -0.67 -0.01 0.51 0.15 0.47 0.49 0.7 -0.01 0.26 0.24 0.17 -0.04 -0.27 -0.11 0.52 -0.24 -0.11 0.37 0.49 0.25 0.31 0.28 0.31 -0.24 -0.13 -0.01 -0.19 -0.28 0.21 1.26 0.11 0.56 -0.05 -0.02 1.47 0.62 -0.1 -0.67 0.15 0.42 0.37 0.8 0.44 -0.47 -0.17 0.01 -0.14 -0.05 0.43 0.99 -1.02 -0.25 -0.33 0.22 0.3 -0.2 0.33 0.04 -0.22 -0.12 -0.08 -0.09 0.03 -0.39 -0.99 0.17 0.06 -0.14 0.06 -0.1 -0.28 -0.81 -0.91 -0.56 -0.66 -0.78 -0.35 -0.26 0.14 0.56 -0.33 -0.09 -0.2 -0.1 -0.02 -0.65 -0.63 -0.05 0.23 -0.75 -0.69 -0.75 0.46 -0.1 0.03 -1.32 -0.64 1.07 -0.64 0.72 -0.76 -0.23 -0.56 -0.15 0.24 -0.08 -2.41 -0.04 At5g48930 248639_at HCT Hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase 10





Phenylpropanoid pathway acyltransferase, BAHD family, group D, HCT 1.44 3.88




















At5g12420 0.549
expressed protein 2.25 0.09 -0.41 -0.81 0.81 1.07 1.54 1.53 -1.02 1.05 2.11 -0.83 -0.26 1.05 -0.83 0.99 1.75 1.37 2.82 2.12 2.54 2.88 0.28 -0.23 -0.39 -0.56 -0.45 -0.12 -1.19 -0.22 -0.69 -0.68 0.91 -0.42 -1.15 -0.19 -0.23 -0.26 -0.05 -0.1 0.42 0.87 1.53 0 -0.67 -0.04 0.42 2.12 2.36 1.32 -1.06 -0.14 -0.06 0.33 0.3 0.71 2.44 0.15 1.91 1.12 2.84 0.05 0.86 -0.6 -0.32 -0.18 1.01 1.24 0.35 0.44 -0.16 -0.06 0.24 0.16 -0.19 -0.24 0.01 1.01 -0.12 -0.09 -0.26 0.18 -0.34 0.49 -0.17 0.05 -0.14 -0.35 -0.15 0.08 -0.25 -0.11 -0.56 -0.2 0.04 0.18 0.06 0.28 0.73 0.34 0.56 0.36 0.5 -0.28 1.01 -0.48 -0.03 0.17 -0.66 -0.28 0.92 0.7 0.7 0.28 -0.3 0.14 -0.43 -0.52 -0.5 -0.74 -0.44 -0.15 -0.67 -1.7 -0.05 0.27 0.31 -0.93 -0.38 -0.22 0.28 -0.18 0.28 -0.17 -0.64 -0.78 -0.06 -0.28 -0.39 0.01 -0.28 0.33 1.08 -0.25 -0.23 -0.02 -0.1 -0.36 -0.46 -0.67 -0.75 -0.4 -0.12 -0.21 -0.71 -1.4 -0.02 -0.33 -1.47 3.21 -0.46 0 -0.92 -0.61 -0.77 -0.33 -0.66 -0.34 0.06 -0.16 -0.42 -0.42 -0.55 -0.73 0.02 0.17 -0.15 -0.71 -1.49 -2.13 -1.59 -1.52 -2.43 -2.27 -0.42 -0.26 -0.13 0.49 0.16 0.13 0.65 -0.59 -0.5 -0.57 -0.5 -0.59 0.33 0.06 -0.26 -0.26 -0.26 0.4 -0.36 -0.16 2.47 -2.5 -1.69 -1.97 0.62 -0.2 -0.01 -0.48 0.4 -3.63 -0.26 At5g12420 245181_at
expressed protein 2




Fatty acid elongation and wax and cutin metabolism

3.59 6.84




















At5g54160 0.548 ATOMT1 A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay. 0.37 0.04 0.25 1.28 0.43 0.38 0.39 0.41 0.67 1.58 0.98 -0.53 -0.11 0.44 0.17 0.88 0.9 0.91 1.23 1.01 1.08 1.22 0.16 0.19 0.18 0.21 -0.45 0.7 0.23 -0.62 0.12 -0.19 -0.46 -0.35 -0.44 0.05 0.12 0.19 -0.22 0.17 0.06 0.32 0.39 -0.08 0.09 -0.08 0.79 -0.03 1.27 0.36 -0.1 -0.39 0.14 0.01 0.81 0.05 1.68 -0.04 1.81 0.08 1.77 -0.21 0.52 -0.06 -0.27 -0.11 0.13 -0.03 0.96 0.23 -0.31 0.02 -0.25 -0.15 -0.11 -0.33 -0.23 0.71 -0.14 -0.26 -0.36 -0.18 -0.01 -0.16 -0.22 -0.32 -0.21 0 0.21 0.23 -0.75 -0.53 -0.28 -0.73 -0.31 -0.79 -0.25 -0.31 -0.42 -0.01 -0.02 0.21 -0.1 -0.43 0.28 0.44 1.21 0.22 -0.21 -0.08 -0.1 0.36 0.46 0.59 -0.11 -0.25 0.46 0.89 0.96 0.25 -0.03 -0.31 -0.65 -0.68 0.33 0.05 -0.49 0.05 -0.28 -0.25 -0.18 -0.25 0.26 -0.35 -0.46 -0.46 -0.35 -0.52 0.2 -0.25 -0.28 -0.11 0.94 -0.25 -0.59 -0.12 0.31 -0.03 0.45 1 -1.44 0.05 -0.1 -0.05 0.07 -0.25 -0.51 0.33 0.85 -0.85 0.03 -0.37 -0.34 -0.74 -0.74 -0.37 0.69 -0.19 -0.08 -0.18 -0.37 -0.73 -0.04 0.01 -0.02 0.04 -0.19 -0.46 -0.8 -1.57 -1.12 -1 -0.63 -0.83 -0.21 0 0.03 -0.35 0.08 0 0.16 -0.22 -0.08 -0.49 -0.43 0.26 0.21 -0.41 -1.03 0.04 -0.71 0.03 0.7 -0.19 1.46 -1.02 -0.6 -0.27 -0.63 -0.24 0.03 -0.01 -0.36 -1.4 -1.38 At5g54160 248200_at ATOMT1 A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay. 10 lignin biosynthesis | caffeate O-methyltransferase activity
suberin biosynthesis | lignin biosynthesis | phenylpropanoid biosynthesis Flavonoid biosynthesis Phenylpropanoid Metabolism | core phenylpropanoid metabolism
Phenylpropanoid pathway Methyltransferase, COMT like 1.83 3.38




















At1g28680 0.545
transferase family protein, similar to elicitor inducible gene product EIG-I24 (Nicotiana tabacum) 0.25 -0.19 0.01 -0.16 0.62 0.34 0.18 0.2 -0.05 0.66 1.09 -0.95 0.03 1.1 0.4 0.34 1.23 0.18 0.87 1.56 1.17 1 -0.2 0.22 0.13 0.2 0.07 -0.35 -0.17 0.05 0.28 0.36 -0.14 -0.24 -0.18 -0.19 -0.28 -0.49 -0.13 -0.01 0.14 0.37 0.81 0.43 0.42 0.21 0.66 0.84 0.5 1 -0.33 -0.5 -0.13 0.07 0.27 1.05 1.32 0.78 1.27 1 0.38 -0.52 -0.03 0.11 -0.68 -0.7 0.21 -0.03 -0.17 0.17 -0.21 -0.13 0.28 -0.18 -0.03 -0.33 -0.04 -0.01 -0.17 -0.08 0.13 -0.17 -0.25 0.15 -0.28 0.2 -0.23 -0.32 -0.06 0.04 -0.4 -0.33 0.32 -0.09 0.19 0.32 -0.11 0.41 0.07 0.32 0.18 0.43 -0.38 -0.22 0.66 0.31 0.32 0.33 -0.44 0.28 -0.75 0.04 -0.51 -0.47 -0.18 0.02 0.37 0.16 0.1 0.19 -0.28 0.8 -0.32 -0.92 -0.84 -0.79 -0.12 0.39 -0.11 -0.04 -0.26 -0.35 0.18 0.13 -0.38 -0.04 1.09 -0.32 0.37 0.12 0.09 0.19 -0.07 0.05 0.51 0.02 0.05 0.12 -0.65 -0.71 -1.27 -0.69 -0.36 -0.6 -0.34 0.21 0.28 -1.15 -0.34 0.42 0.42 -0.24 -0.8 -0.39 0 -0.36 -0.07 0.15 -0.03 -0.26 -0.33 -1.44 -0.44 -0.08 -0.04 0.28 -0.4 -0.5 -0.73 -1.64 -0.76 -0.69 -0.24 -0.45 -0.27 0.31 0.6 0.04 -0.03 -0.04 -0.17 0.25 -0.16 -0.37 1.36 0.9 -0.26 0.07 0.08 -0.16 -0.39 -0.62 0.22 -0.17 0.87 -0.72 0.65 -1.14 -0.69 -0.09 0.09 -0.3 -0.19 -1.05 -0.79 At1g28680 262744_at
transferase family protein, similar to elicitor inducible gene product EIG-I24 (Nicotiana tabacum) 1






acyltransferase, BAHD family, group A, taxol-like 1.79 3.21




















At1g15950 0.539 CCR1 Cinnamoyl CoA reductase isoform 1 (CCR1). Involved in lignin biosynthesis. 0.17 0.17 0.17 0.27 0.52 0.21 0.17 0.28 0.09 0.5 0.57 -0.26 0.64 0.37 0.72 0.22 0.57 0.51 0.4 0.75 0.66 0.23 0.23 0.28 0.41 0.15 0.07 0.38 0.25 0.31 0.36 0.21 0.06 -0.19 -0.54 -0.18 -0.06 -0.13 -0.04 -0.08 -0.28 -0.36 -0.03 0.12 0.19 -0.06 0.56 -0.18 0.33 -0.15 0.02 -0.34 0.06 -0.3 0.28 -0.21 0.21 -0.3 0.03 -0.13 0.07 -0.45 0.04 -0.04 -0.15 0.03 -0.14 0.03 0.34 -0.08 0.07 0 0.19 -0.15 0.32 0.24 -0.05 0.34 -0.18 -0.02 -0.04 0.11 0.15 0.07 0.11 0.12 -0.12 0.11 -0.03 -0.06 -0.31 -0.15 0.19 0.2 0.28 -0.07 0.11 0.24 -0.12 0.47 0.27 0.43 -0.02 -0.13 -0.14 -0.33 -0.14 -0.36 -0.37 -0.28 -0.65 0.23 0.31 0.74 0.04 0.03 0.07 0.61 0.28 0.17 -0.06 -0.01 -0.88 -0.36 -0.05 -0.07 0.12 0.21 0.38 0.05 -0.02 -0.13 0.26 -0.06 -0.21 0.19 0.44 -0.1 0.44 0.07 -0.18 -0.47 -0.04 0.34 0.6 0.27 -0.01 0.15 0.61 0.68 -1.52 -0.06 0.05 -0.03 0.04 -0.68 -0.92 -0.76 -0.15 -0.3 0.12 0.21 -0.62 -1.13 -0.68 -0.56 0.1 0.08 0.08 0 -0.22 -0.78 0.35 0.13 0.34 -0.01 -0.21 -0.28 -0.47 -0.21 -0.27 -0.1 -0.15 -0.43 -0.23 0.04 0.34 -0.41 0.13 -0.13 0.07 -0.06 0.01 -0.18 -0.09 0.14 -0.05 -0.13 -0.37 0.28 -0.83 0.32 0.72 0.37 0.83 -1.55 -0.21 -0.27 -0.24 -0.5 0 0.08 -0.35 -1.09 -1.1 At1g15950 261792_at CCR1 Cinnamoyl CoA reductase isoform 1 (CCR1). Involved in lignin biosynthesis. 10 cinnamoyl-CoA reductase activity | lignin biosynthesis
lignin biosynthesis
Phenylpropanoid Metabolism | core phenylpropanoid metabolism
Phenylpropanoid pathway
1.26 2.38




















At3g29200 0.537 CM1 chorismate mutase, chloroplast -0.04 -0.13 0 0.89 0.23 0.6 -0.31 -0.16 0.33 0.28 1.04 -0.21 0.67 0.87 0.27 0.37 0.56 0 0.04 1.08 0.74 0.28 -0.26 -0.38 -0.83 -0.4 -0.37 -0.19 -0.1 -0.57 -0.69 -0.07 0.12 -0.23 -0.56 -0.09 -0.49 -0.2 -0.38 -0.15 0.03 -0.24 -0.32 0.76 0.67 -0.3 -1.01 0.16 0 -0.1 -0.23 -0.28 -0.07 0.31 -0.06 0.88 -0.08 0.57 -0.44 1.24 0.24 -0.18 -0.06 0 -0.84 -0.81 -0.35 -0.25 -0.09 -0.56 0.15 -0.14 -0.03 0.12 -0.2 0.07 -0.1 -0.21 -0.16 0.12 -0.01 0.21 0.15 0.26 -0.08 -0.07 0.13 -0.23 -0.08 -0.02 -0.24 0.14 0.02 -0.05 -0.08 -0.28 -0.28 -0.06 0.02 -0.04 0.03 -0.05 0.25 -0.05 -0.49 -0.04 0.56 0.47 -0.05 -0.02 0.19 0.19 0.22 0.37 0.11 -0.07 -0.62 -0.06 -0.03 -0.03 -0.12 -0.23 -0.33 -0.93 -0.11 -0.2 0.16 0.52 0.14 0.17 -0.16 -0.14 -0.1 -0.43 0.16 -0.16 0.69 0.18 0.09 0.08 -0.05 0.22 -0.3 0.65 0.64 0.46 0.56 0.87 1 -0.47 -1.56 0.03 0.06 0.26 -0.1 -0.08 0.69 -1.94 -1.51 -0.48 0.15 -0.03 -0.08 -0.09 0.04 0.52 0.46 0.34 0.15 -0.15 -0.33 -0.03 0.2 0 0.37 0.05 0.22 0.09 -0.15 -0.45 -0.26 0.02 -0.3 -0.11 0.21 0.39 1.37 0.67 -0.17 0.06 -0.03 0.01 0.31 0.8 0.36 0.05 -0.16 0.09 -0.4 -0.31 -0.11 0.06 0.2 0.36 0.56 -1.25 -0.41 -0.16 -0.51 -0.17 0.08 0.62 -0.33 -1.04 -0.08 At3g29200 257746_at CM1 chorismate mutase, chloroplast 10 chorismate mutase activity | aromatic amino acid family biosynthesis, shikimate pathway
phenylalanine biosynthesis II | tyrosine biosynthesis I | ascorbate glutathione cycle Phenylalanine, tyrosine and tryptophan biosynthesis Phenylpropanoid Metabolism | Aromatic amino acid (Phe, Tyr, Trp) metabolism
Shikimate pathway | chorismate biosynthesis
1.39 3.31




















At3g06300 0.529
Encodes a prolyl-4 hydroxylase that can hydroxylate poly(L-proline)and other proline rich peptides, including those with sequences corresponding to those in arabinogalactan proteins and extensins. 0.04 -0.14 -0.03 -0.37 0.71 0.92 0.84 0.96 0.47 1.41 0.81 -0.32 -0.56 0.54 0.04 0.42 0.68 0.93 1.24 0.59 1.19 0.98 0.16 0.31 0.34 0.15 0.09 0.14 0.15 0.38 0.43 -0.02 0.43 0.01 -0.35 -0.04 -0.34 -0.08 -0.03 0.01 0.51 0.55 0.7 0.62 0.71 -0.28 0.48 2.02 0.85 1.46 -0.15 0.01 0.25 0.27 0.73 1.19 1.54 0.62 1.75 0.82 1.4 0.24 0.42 -0.13 0.08 -0.1 0.27 -0.07 0.22 0.37 0.12 -0.12 -0.06 0.1 -0.1 -0.09 -0.1 0.57 0.03 -0.36 0.2 0.13 0.34 0.43 -0.2 -0.09 0.09 -0.16 -0.42 -0.39 -0.07 -0.03 0.02 0.03 0.47 0.5 -0.32 -0.26 -0.1 -0.21 -0.23 -0.04 -0.14 -0.22 0.34 -0.76 -0.55 -0.47 -0.37 -0.55 -0.4 -1.03 -1.06 -0.77 -0.24 -0.21 -0.57 -0.52 -0.49 -0.5 -0.41 -0.49 -1.47 -1.83 -1.22 -0.81 0.06 0.12 -0.21 -0.51 0.1 0.07 0.32 0.38 -0.19 -0.2 -0.33 -0.12 -0.36 -0.28 0.07 0.21 -0.09 -0.27 -0.8 -0.54 -0.13 -0.41 -0.67 -0.44 -0.24 -0.25 -0.31 -0.09 -0.44 -0.28 -0.45 -0.11 -1.02 0.23 -0.4 0.14 -0.13 0.13 -0.23 0.23 -0.22 -0.19 -0.51 -0.4 -0.36 -0.49 -0.65 -0.33 -1.01 -0.61 -0.2 -0.59 -0.67 -0.26 -0.21 -0.09 -0.57 0.14 0.09 -0.49 -0.22 0.04 -0.34 -0.34 0.15 -0.1 -0.28 -0.39 0.65 0.36 0.42 0.61 0.68 0.31 -0.31 0.25 0.26 0.33 1.85 -1.29 -0.25 -0.94 -0.61 0.03 -0.14 0.06 0.34 -0.8 -0.62 At3g06300 258852_at
Encodes a prolyl-4 hydroxylase that can hydroxylate poly(L-proline)and other proline rich peptides, including those with sequences corresponding to those in arabinogalactan proteins and extensins. 6 procollagen-proline 4-dioxygenase activity | peptidyl-proline hydroxylation to 4-hydroxy-L-proline


Biosynthesis of Amino Acids and Derivatives | Prolin/Hydroxyproline from glutamate


1.77 3.86




















At4g35150 0.523
O-methyltransferase family 2 protein, similar to caffeic acid O-methyltransferase, Pinus taeda 0.9 0.03 -0.12 -1.13 -0.15 0.66 -0.37 -0.32 1.63 0.98 2.14 -0.35 4.88 2.08 2.48 3 0.79 -0.3 3.73 2.1 0.03 2.18 0.8 -0.24 0.16 0.23 -0.68 0.52 0.41 -0.79 -0.07 0.28 -0.15 -0.15 -0.15 -0.15 -0.15 -0.15 -0.15 -0.02 -0.15 -0.15 -0.15 0.61 2.54 -0.15 -0.15 -0.87 -0.15 0.43 -0.56 -0.13 0.7 0.22 0.07 -0.15 1.76 0.22 1.49 0.37 1.6 0.4 0.91 -0.15 -0.15 -0.15 -0.13 -0.15 -0.15 -0.15 -0.39 -0.4 0.16 0.02 -0.21 -0.43 -0.12 -0.25 -0.15 -0.15 -0.15 -0.15 -0.15 -0.15 -0.26 -0.25 -0.18 -0.42 0.06 -0.63 -0.15 -0.15 -0.15 -0.15 -0.15 -0.15 -0.02 -0.19 -0.31 0.07 0.26 -0.16 -0.15 -0.15 1.18 -0.15 -0.15 -0.15 -0.23 -0.42 0.04 -0.23 -0.54 -1.42 -0.15 -0.15 -0.15 -0.15 -0.15 -0.15 -0.27 -0.14 -0.97 -1.43 -0.45 -1.73 -0.15 -0.15 -0.15 -0.15 -0.15 -0.15 -0.15 -0.15 -0.71 -0.19 -0.32 0.19 -0.14 0.41 -0.03 1.76 -0.15 1.33 0.93 -0.15 -0.15 -0.15 -0.15 -0.15 -0.15 -0.22 0.1 -0.12 0.56 0.22 0.28 -1.48 1.14 -0.15 -0.15 -0.15 0.24 -0.15 -0.15 -0.15 -0.15 -0.15 -0.37 -0.56 -1.11 -2.64 -2.1 -0.57 -0.54 -0.25 -0.15 -0.15 -0.15 -0.15 -0.15 -0.15 -0.15 -0.15 -0.53 -0.03 -0.34 -0.71 -0.73 -0.44 0.2 -0.15 -0.15 -0.15 -0.15 -0.15 -0.15 -0.15 -0.15 -0.15 -0.15 0.96 -0.67 -1.54 2.97 -3.6 -0.3 -2.57 0.37 -0.99 -0.07 0.89 -0.15 -0.43 -0.15 At4g35150 253177_s_at (m)
O-methyltransferase family 2 protein, similar to caffeic acid O-methyltransferase, Pinus taeda 2





Phenylpropanoid pathway Methyltransferase, COMT like 2.79 8.50




















At4g35160 0.523
O-methyltransferase family 2 protein, similar to caffeic acid O-methyltransferase, Pinus taeda 0.9 0.03 -0.12 -1.13 -0.15 0.66 -0.37 -0.32 1.63 0.98 2.14 -0.35 4.88 2.08 2.48 3 0.79 -0.3 3.73 2.1 0.03 2.18 0.8 -0.24 0.16 0.23 -0.68 0.52 0.41 -0.79 -0.07 0.28 -0.15 -0.15 -0.15 -0.15 -0.15 -0.15 -0.15 -0.02 -0.15 -0.15 -0.15 0.61 2.54 -0.15 -0.15 -0.87 -0.15 0.43 -0.56 -0.13 0.7 0.22 0.07 -0.15 1.76 0.22 1.49 0.37 1.6 0.4 0.91 -0.15 -0.15 -0.15 -0.13 -0.15 -0.15 -0.15 -0.39 -0.4 0.16 0.02 -0.21 -0.43 -0.12 -0.25 -0.15 -0.15 -0.15 -0.15 -0.15 -0.15 -0.26 -0.25 -0.18 -0.42 0.06 -0.63 -0.15 -0.15 -0.15 -0.15 -0.15 -0.15 -0.02 -0.19 -0.31 0.07 0.26 -0.16 -0.15 -0.15 1.18 -0.15 -0.15 -0.15 -0.23 -0.42 0.04 -0.23 -0.54 -1.42 -0.15 -0.15 -0.15 -0.15 -0.15 -0.15 -0.27 -0.14 -0.97 -1.43 -0.45 -1.73 -0.15 -0.15 -0.15 -0.15 -0.15 -0.15 -0.15 -0.15 -0.71 -0.19 -0.32 0.19 -0.14 0.41 -0.03 1.76 -0.15 1.33 0.93 -0.15 -0.15 -0.15 -0.15 -0.15 -0.15 -0.22 0.1 -0.12 0.56 0.22 0.28 -1.48 1.14 -0.15 -0.15 -0.15 0.24 -0.15 -0.15 -0.15 -0.15 -0.15 -0.37 -0.56 -1.11 -2.64 -2.1 -0.57 -0.54 -0.25 -0.15 -0.15 -0.15 -0.15 -0.15 -0.15 -0.15 -0.15 -0.53 -0.03 -0.34 -0.71 -0.73 -0.44 0.2 -0.15 -0.15 -0.15 -0.15 -0.15 -0.15 -0.15 -0.15 -0.15 -0.15 0.96 -0.67 -1.54 2.97 -3.6 -0.3 -2.57 0.37 -0.99 -0.07 0.89 -0.15 -0.43 -0.15 At4g35160 253177_s_at (m)
O-methyltransferase family 2 protein, similar to caffeic acid O-methyltransferase, Pinus taeda 2





Phenylpropanoid pathway Methyltransferase, COMT like 2.79 8.50




















At5g24400 0.523
low similarity to 6-phosphogluconolactonase (Homo sapiens) 0.62 -0.09 0.09 -0.22 0.37 0.18 0.28 0.33 -0.06 0.44 0.02 -0.01 -0.06 -0.01 -0.14 -0.56 -0.05 0.11 0.07 -0.04 0.12 -0.03 -0.04 -0.13 -0.13 0.04 -0.18 -0.09 -0.05 0.06 0.12 -0.22 -0.01 0.04 0 -0.11 -0.04 -0.05 0.02 0.01 -0.18 -0.05 0.01 -0.09 -0.04 0.05 0.55 -0.01 0.14 -0.02 0.09 0.15 0.1 0.12 0.21 0.49 0.28 0.21 0.36 0.61 0.43 0.01 0.15 0.04 0.06 0.25 0 -0.12 0.14 -0.04 0.17 -0.18 0.06 0.16 -0.02 0.11 -0.22 -0.16 -0.11 0.09 0.05 -0.01 0.02 -0.15 -0.26 -0.03 0.24 -0.04 -0.04 -0.06 0 0.11 0.03 -0.15 0.11 -0.06 -0.25 0.01 0.07 0.02 -0.04 -0.01 0.16 0.24 0.04 -0.2 0.01 -0.34 -0.08 0.39 0.25 0.16 -0.06 -0.18 -0.08 0.24 0.01 -0.02 0.47 0.19 -0.06 0.15 -0.35 -0.78 -0.46 -0.48 0 0.14 0.04 0.07 -0.07 -0.15 0.1 0.03 0.06 -0.19 0.03 0.09 -0.16 0.07 -0.05 0.27 -0.27 0.12 -0.01 0.32 -0.05 0.03 -0.09 -0.26 0.14 -0.22 -0.06 -0.16 -0.14 0.26 0.51 0.25 -0.16 -0.19 0.3 0.02 -0.03 -0.1 0.01 -0.09 0.14 0.14 0.21 -0.25 -0.08 -0.13 0.05 -0.07 0.07 0.16 -0.17 -0.35 -0.43 0.09 0.05 -0.31 -0.23 -0.16 0.05 -0.3 0.06 0.1 -0.03 -0.16 -0.43 0.09 -0.22 -0.27 -0.16 -0.42 0.08 -0.17 0.16 -0.28 -0.09 -0.13 0.47 -0.34 1.83 -1.14 0.43 -1.31 0.02 0.11 0.08 -0.4 0.01 0.32 -0.25 At5g24400 249733_at
low similarity to 6-phosphogluconolactonase (Homo sapiens) 2

oxidative branch of the pentose phosphate pathway Pentose phosphate pathway



0.75 3.13




















At1g13110 0.522 CYP71B7 cytochrome P450 family protein 0.44 -0.47 0.51 -1.09 0.53 0.68 0.82 1.06 0.6 1.2 0.3 -0.84 -2.77 0.51 -0.68 -0.79 0.99 1.52 0.63 0.66 2.02 0.71 0.46 0 0.11 0.08 0.35 -0.46 0.11 -0.1 0.32 -0.03 0.07 0.11 0.22 0.04 -0.06 -0.25 -0.04 0.31 0.05 -0.27 0.11 0.4 0.06 0.18 -0.13 0.9 1.06 0.52 -0.09 0.38 0.21 0.12 0.91 1.56 2.16 1.51 2.04 2.06 2.68 0.46 0.33 -0.68 -0.52 -0.5 -0.06 -0.07 -0.28 0.65 -0.09 0.64 0.13 0.22 0.05 -0.04 0.6 0.31 0.07 0.23 0.04 0.01 0.15 -0.04 0.38 0.24 0.21 0.02 0.13 -0.07 0.03 0.52 0.04 0.2 0.25 0.36 0.14 0.34 0.44 0 0.49 0.19 0.42 0.41 0.55 -0.04 -0.54 -0.19 -0.46 -1.57 -0.77 -0.75 -0.48 0.12 0.3 0.43 -0.97 -0.96 -1.54 -2.14 -0.76 -1.46 -0.91 -1.11 -0.24 0.07 0.69 -0.55 -0.41 -0.15 -0.6 -0.27 -0.13 0.05 -0.79 -0.4 -0.57 -0.24 -0.31 -0.14 -0.27 -0.93 0.1 -0.02 -1.01 -0.41 0.82 -0.34 -0.63 -0.9 -0.93 0.1 -0.16 0.12 -0.25 -1.07 -0.31 0.42 -0.79 0.37 0.03 0.01 -0.08 -0.72 -0.82 -0.41 0.05 0.28 -0.4 -0.01 -0.6 -0.44 0.39 0.27 0 0.12 -0.04 0.16 0.02 0.05 0.35 0.02 0.02 0.28 -0.04 0.42 -0.13 -0.64 0.41 0.37 0.51 -0.3 0.05 -0.54 -0.04 0.59 0.31 0.6 0.31 0.69 -0.01 0.2 0.18 0.5 3.89 -2.75 -0.51 -5.23 0.27 0.23 -0.18 -0.4 -1.03 -0.1 -3.37 At1g13110 262793_at CYP71B7 cytochrome P450 family protein 1






cytochrome P450 family 2.10 9.12




















At2g48130 0.520
protease inhibitor/seed storage/lipid transfer protein (LTP) family protein 2.68 0.01 0.09 -0.24 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 -0.26 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 -0.23 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 -0.17 -0.18 0 0.25 0.06 0.13 -0.32 0.3 0.01 0.01 0.01 0.01 0.01 0.01 -0.25 -0.24 0.27 0.03 0.09 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.22 -0.02 0.79 0.68 0.74 0.37 0.01 0.01 0.01 0.01 0.01 0.01 -0.5 -0.7 0.75 0.83 0.68 -0.09 0.01 0.01 0.01 0.01 0.01 0.01 -0.28 -0.49 -1.27 -2.21 0.37 -0.27 -1.74 0.01 0.01 0.01 0.01 0.01 0.01 0.01 -0.23 -0.54 -0.71 0.1 -0.16 0.34 -0.02 0.01 0.01 0.75 0.41 0.01 0.01 0.01 0.01 0.01 0.01 0.04 0.38 0.61 0.07 -0.46 -0.53 0.48 -2.87 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.06 -0.07 0.25 1.15 -0.22 0.2 -0.16 -0.16 0.01 0.01 0.01 0.01 0.01 0.01 0.41 0.01 -0.22 -0.14 -0.19 1.03 0.46 0.16 1.12 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.01 0.96 -0.43 5.28 -4.23 -1.22 -3 0.91 -0.54 -0.12 -0.03 0.01 0.01 0.01 At2g48130 262349_at
protease inhibitor/seed storage/lipid transfer protein (LTP) family protein 2




Miscellaneous acyl lipid metabolism

1.27 9.51




















At1g48860 0.517
Strong similarity to 5-enolpyruvylshikimate-3-phosphate (EPSP) synthase from Arabidopsis thaliana 0.52 -0.49 -0.35 1.15 0.54 0.91 0.24 0.38 0.03 0.25 1.13 -0.24 0.16 0.69 0.37 0.2 0.8 0.03 0.33 1.18 0.79 0.51 0.04 0.12 -0.02 -0.17 -0.09 0.12 -0.05 -0.32 0.08 -0.2 -0.03 -0.17 -0.35 -0.01 -0.27 -0.36 -0.31 -0.27 0.01 0.35 0.47 0.38 0.64 -0.27 0.04 1.26 0.35 0.21 -0.4 -0.49 -0.04 0.08 0.36 0.72 1.24 0.45 1.32 0.72 1.09 -0.55 0.47 0.07 -0.21 -0.24 -0.16 -0.22 0.19 -0.25 -0.16 -0.31 0.07 -0.37 -0.43 -0.18 -0.28 0.38 0 -0.08 0.02 -0.07 0.18 0.01 -0.11 0.13 -0.34 -0.21 -0.15 -0.27 -0.01 -0.13 0.19 -0.15 0.26 -0.37 -0.24 0.13 -0.33 0 -0.07 -0.06 0.07 -0.2 0.17 -0.13 0.31 -0.23 -0.22 0.16 0.07 0.09 -0.16 -0.09 -0.13 -0.18 -0.24 0.06 0.38 0.05 -0.22 0.14 -0.46 -0.44 -0.17 -0.16 -0.18 0.2 0.2 -0.02 -0.09 -0.35 0.2 -0.56 -0.11 -0.19 0.45 -0.02 0.07 0.05 -0.13 -0.03 -0.6 -0.11 0.14 0.02 -0.12 0.07 0.24 0 -0.73 -0.28 -0.08 -0.43 -0.46 -0.46 -0.28 -0.36 0.35 0.24 0.2 0 -0.36 -0.86 -0.07 -0.11 0.12 -0.11 -0.11 -0.28 -0.12 -1.08 -0.52 -0.13 -0.01 -0.01 -0.23 -0.42 -0.28 -0.46 -0.03 0.05 0.09 -0.09 -0.36 -0.18 0.3 0.27 -0.07 -0.12 -0.26 -0.05 -0.14 -0.16 0.76 0.6 0.34 -0.5 -0.42 -0.12 -0.37 0.1 0.38 -0.14 -0.07 -0.76 -0.53 0.11 0.24 -0.36 -0.1 -0.02 -0.37 0.36 -0.15 At1g48860 246627_s_at (m)
Strong similarity to 5-enolpyruvylshikimate-3-phosphate (EPSP) synthase from Arabidopsis thaliana 6 glyphosate metabolism | aromatic amino acid family biosynthesis, shikimate pathway
chorismate biosynthesis Phenylalanine, tyrosine and tryptophan biosynthesis Phenylpropanoid Metabolism | Aromatic amino acid (Phe, Tyr, Trp) metabolism
Shikimate pathway | chorismate biosynthesis
1.22 2.40




















At2g45300 0.517
3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase 0.52 -0.49 -0.35 1.15 0.54 0.91 0.24 0.38 0.03 0.25 1.13 -0.24 0.16 0.69 0.37 0.2 0.8 0.03 0.33 1.18 0.79 0.51 0.04 0.12 -0.02 -0.17 -0.09 0.12 -0.05 -0.32 0.08 -0.2 -0.03 -0.17 -0.35 -0.01 -0.27 -0.36 -0.31 -0.27 0.01 0.35 0.47 0.38 0.64 -0.27 0.04 1.26 0.35 0.21 -0.4 -0.49 -0.04 0.08 0.36 0.72 1.24 0.45 1.32 0.72 1.09 -0.55 0.47 0.07 -0.21 -0.24 -0.16 -0.22 0.19 -0.25 -0.16 -0.31 0.07 -0.37 -0.43 -0.18 -0.28 0.38 0 -0.08 0.02 -0.07 0.18 0.01 -0.11 0.13 -0.34 -0.21 -0.15 -0.27 -0.01 -0.13 0.19 -0.15 0.26 -0.37 -0.24 0.13 -0.33 0 -0.07 -0.06 0.07 -0.2 0.17 -0.13 0.31 -0.23 -0.22 0.16 0.07 0.09 -0.16 -0.09 -0.13 -0.18 -0.24 0.06 0.38 0.05 -0.22 0.14 -0.46 -0.44 -0.17 -0.16 -0.18 0.2 0.2 -0.02 -0.09 -0.35 0.2 -0.56 -0.11 -0.19 0.45 -0.02 0.07 0.05 -0.13 -0.03 -0.6 -0.11 0.14 0.02 -0.12 0.07 0.24 0 -0.73 -0.28 -0.08 -0.43 -0.46 -0.46 -0.28 -0.36 0.35 0.24 0.2 0 -0.36 -0.86 -0.07 -0.11 0.12 -0.11 -0.11 -0.28 -0.12 -1.08 -0.52 -0.13 -0.01 -0.01 -0.23 -0.42 -0.28 -0.46 -0.03 0.05 0.09 -0.09 -0.36 -0.18 0.3 0.27 -0.07 -0.12 -0.26 -0.05 -0.14 -0.16 0.76 0.6 0.34 -0.5 -0.42 -0.12 -0.37 0.1 0.38 -0.14 -0.07 -0.76 -0.53 0.11 0.24 -0.36 -0.1 -0.02 -0.37 0.36 -0.15 At2g45300 246627_s_at (m)
3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase 10 glyphosate metabolism | aromatic amino acid family biosynthesis, shikimate pathway
chorismate biosynthesis Phenylalanine, tyrosine and tryptophan biosynthesis Phenylpropanoid Metabolism | Aromatic amino acid (Phe, Tyr, Trp) metabolism
Shikimate pathway | chorismate biosynthesis
1.22 2.40




















At3g53260 0.510 PAL2 phenylalanine ammonia-lyase 2 -0.09 0.24 -0.12 -0.55 0.49 1.17 -0.4 -0.28 0.67 1.05 0.8 -1.44 -0.22 0.75 1 0.03 0.82 -0.25 -0.34 1.26 0.97 0.36 0.59 -0.2 0.12 -0.43 -0.31 0.28 -0.01 -0.72 -0.46 -0.3 -0.39 -0.35 -0.57 0.17 -0.23 -0.5 -0.06 -0.02 -0.38 -0.46 -0.75 -0.06 0.5 -0.31 -0.27 0.1 -0.09 -1.35 0.59 -0.34 -0.09 0.11 0.07 0.56 1.67 0.5 1.69 0.4 0.24 -0.15 0.16 -0.3 -0.27 0.06 -0.41 -0.67 0.14 -0.14 0.11 -0.21 -0.08 -0.1 0.17 -0.24 -0.36 1.09 -0.18 0.07 -0.24 0.03 0.19 -0.07 -0.17 0.07 -0.17 0 -0.03 -0.37 -0.08 0.07 0.06 -0.11 -0.27 -0.28 0.09 0.31 -0.18 0.4 0.17 -0.07 0.05 0.07 -0.56 -0.95 -1.27 -1.32 -0.14 0.23 0.28 0.71 0.37 0.15 0.13 0.22 -0.68 -0.05 -0.69 -1.02 0 0.5 0.5 0.91 0.21 -0.03 -0.31 0.56 0.1 0.33 -0.26 -0.25 0.06 -0.17 0.32 0.57 1.2 0.41 0.89 0.41 -0.05 -0.51 -2 0.88 1.06 0.06 0.57 0.79 2.11 2.42 0.99 -0.15 0.14 0.32 1.31 1.32 1.38 -1.26 -0.68 -0.08 -0.31 -0.61 -0.96 -1.79 -1.39 -0.94 -0.36 -0.18 -0.09 -0.6 -0.89 -1.89 -0.66 -0.49 0.05 -0.41 0.05 -0.38 -0.48 -0.49 -0.05 -0.75 -1.29 -0.67 0.07 0.38 1.1 1.13 0.06 -0.11 -0.17 0.06 -0.09 0.81 0.57 0.19 -0.27 -0.11 -0.55 0.35 -0.33 0.05 -0.09 0.22 2.36 -1.71 0.99 0.48 -0.18 -0.27 0.24 0.2 -0.45 -2.69 0.3 At3g53260 251984_at PAL2 phenylalanine ammonia-lyase 2 10 defense response | response to wounding | phenylpropanoid biosynthesis | phenylalanine ammonia-lyase activity amino acid metabolism | metabolism of the cysteine - aromatic group | biosynthesis of secondary products derived from L-phenylalanine and L-tyrosine | biosynthesis of phenylpropanoids salicylic acid biosynthesis | suberin biosynthesis | lignin biosynthesis | phenylpropanoid pathway, initial reactions Nitrogen metabolism | Tyrosine metabolism | Phenylalanine metabolism | Alkaloid biosynthesis II Phenylpropanoid Metabolism | core phenylpropanoid metabolism
Phenylpropanoid pathway
2.41 5.11




















At2g37040 0.509 PAL1 phenylalanine ammonia-lyase 1 0.36 -0.01 -0.14 0.18 0.71 0.95 0.21 0.32 0.8 1.44 1.48 -0.67 1.7 1.12 0.92 1.21 1.32 0.56 2 1.54 1.38 2.06 0.17 -0.22 0.03 0.44 -0.34 -0.03 0.16 -0.54 0.39 0.21 -0.34 -0.59 -1 0.28 -0.21 -0.94 -0.48 0.07 0.13 -0.64 0.07 0.2 0.13 -0.02 -0.21 1.53 0.32 -1.15 -0.21 -0.67 -0.12 0.1 0.77 0.61 2.76 0.59 2.67 0.87 2.29 -0.41 0.59 -0.19 -0.05 0.19 0.35 -0.15 0.57 -0.22 -0.59 0.41 -0.37 -0.36 -0.61 -0.31 -0.28 1.62 -0.3 0 -0.13 -0.53 -0.02 0.11 0.04 -0.1 -0.71 -0.6 0.05 -0.35 -0.61 -0.66 0.37 -0.44 -0.56 -0.61 -0.05 -0.07 -0.02 -0.34 -0.17 -0.48 0.21 0.06 0.65 0.11 -0.28 -0.39 0.38 0.36 0.19 -0.07 0.04 0.28 0.18 0 0.6 0.53 0.04 -0.1 0.31 0.28 0.47 0.07 0.23 0.32 -0.63 0.23 0.22 0.47 0.42 -0.39 0.16 -0.42 -0.37 0.64 0.94 0.35 -0.23 0.12 -0.34 -0.03 -0.2 0.53 0.98 0.15 0.24 1.37 1.92 0.73 -1.61 -0.11 -0.31 -0.13 0.07 0.05 1.21 -1.1 -0.27 0.93 -0.69 -0.8 -1.59 -3.08 -1.39 -0.63 0.03 -0.48 -0.79 -0.56 -1.26 -2.8 -1.58 -1.23 -0.65 -0.89 -0.3 -0.49 -0.77 -1.58 -1.13 -1.13 -1.24 -0.8 -0.6 0.26 0.95 0.99 -0.43 -0.23 -0.53 -0.67 -0.52 -0.13 1.69 0.9 0.02 -0.05 -0.59 -0.42 -0.64 0.44 -1.03 0.1 0.8 -0.7 0.25 0.17 -0.7 -0.74 0.06 0.49 -0.56 -2.73 -0.6 At2g37040 263845_at PAL1 phenylalanine ammonia-lyase 1 10 defense response | response to wounding | phenylpropanoid biosynthesis | phenylalanine ammonia-lyase activity amino acid metabolism | metabolism of the cysteine - aromatic group | biosynthesis of secondary products derived from L-phenylalanine and L-tyrosine | biosynthesis of phenylpropanoids salicylic acid biosynthesis | suberin biosynthesis | lignin biosynthesis | phenylpropanoid pathway, initial reactions Nitrogen metabolism | Tyrosine metabolism | Phenylalanine metabolism | Alkaloid biosynthesis II Phenylpropanoid Metabolism | core phenylpropanoid metabolism
Phenylpropanoid pathway
2.67 5.84




















At5g64440 0.509
amidase family protein, low similarity to enantiomerase-selective amidase (Rhodococcus sp.) 0.62 -0.11 -0.07 -0.36 0.05 -0.19 -0.15 -0.06 0.1 0.52 0.47 -0.08 0.57 0.37 0.07 0.31 0.38 0.25 0.32 0.28 0.31 0.2 -0.07 -0.1 0.17 0.2 -0.21 0.04 -0.21 0.01 0.41 -0.16 0.07 0.03 -0.47 0.04 -0.15 -0.02 0.06 0.23 0.05 0.02 0.07 0.13 0.59 -0.15 0.27 0.46 0.55 0.2 0.06 0.19 0.35 0.2 0.39 0.42 0.79 0.14 0.84 0.42 0.39 0.18 0.08 -0.13 -0.27 0.12 0.06 -0.05 0.09 0.42 -0.1 0.01 0.3 0.01 -0.05 -0.49 -0.1 0.22 -0.26 -0.04 -0.16 -0.07 -0.12 -0.16 -0.07 0.26 -0.11 -0.05 -0.09 0.07 -0.27 -0.12 -0.25 0.09 0.33 0.25 -0.15 0.16 -0.23 0.17 0.07 0.56 -0.11 -0.15 0.39 0.71 0.34 0.23 -0.23 0.14 -0.27 0.17 -0.03 0.18 -0.14 0.09 0.01 0.44 0.47 0.51 -0.19 0.07 -0.59 -0.56 -0.2 -0.09 -0.06 -0.07 0.13 -0.21 -0.08 0.19 0.25 0.17 -0.27 -0.27 -0.15 -0.21 0.24 -0.16 -0.13 -0.05 0.24 -0.24 -0.76 -0.13 -0.38 -0.59 -0.24 0.05 -0.11 -0.24 -0.06 -0.1 -0.3 -0.26 -0.33 -0.46 0 -0.17 0.07 -0.12 -0.26 -1.38 -0.77 -0.06 -0.04 0.09 -0.07 -0.11 0.13 -0.94 -0.63 0.03 0.02 0.08 -0.01 -0.23 -0.27 -0.87 -0.63 -0.2 -0.23 -0.2 -0.14 -0.1 0.19 0.06 0.1 -0.11 0.01 -0.27 -0.2 -0.28 -0.19 0.48 0.19 0.17 0.07 0.18 -0.13 0 0.67 -0.13 1.47 -1.74 -0.61 0.81 0.19 0 0.05 0.1 0.02 -0.62 -0.23 At5g64440 247262_at
amidase family protein, low similarity to enantiomerase-selective amidase (Rhodococcus sp.) 10




Lipid signaling

1.12 3.22




















At3g02360 0.505
6-phosphogluconate dehydrogenase family protein 0.56 -0.07 -0.04 0.08 0.43 0.82 0.06 0.05 0.46 0.43 1.02 -0.56 1.17 1.13 0.63 1.08 0.85 -0.18 0.57 1.27 0.61 0.64 0 0.1 0.21 0.09 -0.14 -0.04 -0.06 -0.05 0.17 0.06 0.16 -0.24 0.05 -0.14 -0.35 -0.17 -0.14 -0.18 -0.33 -0.03 0.11 0.79 1.06 -0.32 0.13 1.31 0.52 0.33 -0.27 -0.33 -0.11 0.07 0.05 0.96 1.3 0.87 1.37 0.95 0.59 -0.22 0.19 -0.16 -0.36 -0.2 0.13 -0.17 0.01 -0.06 -0.21 -0.22 -0.19 -0.28 -0.28 -0.25 -0.34 0.71 -0.18 -0.28 0.05 -0.02 0 0.12 -0.28 -0.25 -0.38 -0.25 -0.13 -0.47 -0.21 -0.13 0.13 0.25 0.28 0.07 -0.35 -0.17 -0.4 -0.16 -0.12 -0.09 -0.19 -0.11 0.76 0.82 0.68 0.8 -0.25 0.04 -0.12 -0.08 0.03 -0.07 -0.2 -0.11 0.41 0.74 0.48 0.75 -0.12 -0.03 -0.45 -0.6 -0.3 -0.32 -0.37 -0.12 0.1 -0.04 0.34 0.16 0.13 -0.24 -0.16 -0.07 0.22 -0.16 0.12 -0.07 -0.18 0.02 -0.04 0.02 0.15 -0.13 -0.16 -0.25 -0.31 -0.67 -0.52 -0.38 -0.33 -0.39 -0.55 -0.44 -0.14 -0.63 -0.38 0.38 0.09 -0.11 -0.52 -0.8 -0.79 -0.46 -0.15 -0.06 -0.23 -0.45 -0.28 -0.95 -0.34 -0.28 -0.26 -0.18 -0.17 -0.28 -0.5 -0.61 -0.31 -0.32 -0.42 -0.48 -0.27 -0.31 -0.05 -0.09 -0.06 -0.23 -0.27 -0.11 -0.06 -0.62 0.5 0.65 0.16 -0.22 -0.05 0.04 -0.34 0.19 0.65 0.07 0.55 -1.08 -0.04 -0.64 -0.24 -0.5 -0.28 -0.28 -0.17 0.31 -0.26 At3g02360 256328_at
6-phosphogluconate dehydrogenase family protein 2
C-compound and carbohydrate metabolism | pentose-phosphate pathway oxidative branch of the pentose phosphate pathway | superpathway of gluconate degradation Pentose phosphate pathway Intermediary Carbon Metabolism


1.45 2.45




















At1g80460 0.504 NHO1 Encodes a protein similar to glycerol kinase, which converts glycerol to glycerol 3-phosphate and performs a rate-limiting step in glycerol metabolism. This gene is required for both general and specific resistance against bacteria and fungi. Arabidopsis 1.01 0 0.07 -0.95 0.67 0.47 0.66 0.72 -0.36 0.81 1.56 -0.55 -0.46 1.12 -0.27 0.15 1.5 0.79 0.87 1.56 1.61 1.15 0.08 0.22 0.35 0.06 -0.05 0.03 0.12 -0.04 0.37 0.27 0.07 -0.28 -0.54 -0.05 -0.05 0.03 -0.06 0.13 -0.01 0.45 0.65 -0.41 -0.54 -0.34 0.03 0.02 0.15 0.42 0 -0.28 0.28 0.45 1.11 0.97 2.25 0.59 2.24 1.27 2.37 -0.13 0.57 -0.21 -0.34 -0.3 0.15 0.23 0.15 0.5 -0.04 0.09 0.14 -0.07 -0.02 -0.28 -0.15 0.53 -0.28 -0.28 0.04 0.19 0.09 -0.08 -0.12 0.12 -0.28 -0.05 -0.08 -0.28 0 0.36 0.06 0.22 0.34 0.03 -0.23 0.16 -0.13 -0.01 -0.28 -0.23 0.33 -0.02 0.2 -0.04 -0.64 -0.43 -0.25 -0.02 -0.18 -0.27 -0.2 -0.45 -0.17 -0.03 -0.25 -0.15 -0.17 -0.42 -0.18 0.03 -0.5 -0.66 -0.31 -0.48 -0.26 -0.75 -0.03 0.07 -0.03 0.16 0.14 0.36 -0.51 -0.15 0.12 -0.13 -0.03 -0.27 -0.23 -0.06 1.04 -0.73 -1.99 -0.21 -0.19 -0.61 -0.19 -0.25 -0.92 -0.28 -0.07 -0.26 -0.26 -0.35 -0.67 0.19 -0.11 1.27 -0.35 -0.23 -0.22 -1.12 -0.45 -0.02 0.02 -0.11 -0.11 -0.13 0.01 -0.32 0.19 0.1 -0.02 -0.02 -0.2 -0.21 -0.54 -1.18 -0.93 -0.91 -0.53 -0.3 -0.23 -0.39 0.21 -0.05 -0.15 -0.34 -0.17 -0.46 -0.22 -0.66 -0.25 0.16 0.04 0.36 -0.12 0.35 -0.21 0 0.18 -0.22 0.05 -0.36 -0.12 -0.25 -0.36 -0.44 -0.01 -0.08 0.1 -0.46 -1.38 At1g80460 260274_at NHO1 Encodes a protein similar to glycerol kinase, which converts glycerol to glycerol 3-phosphate and performs a rate-limiting step in glycerol metabolism. This gene is required for both general and specific resistance against bacteria and fungi. Arabidopsis 8 glycerol kinase activity | response to bacteria | defense response to bacteria
glycerol degradation II | glycerol metabolism Glycerolipid metabolism Gluconeogenesis from lipids in seeds


1.78 4.36




















At2g35120 0.501
similar to Glycine cleavage system H protein, mitochondrial precursor from Flaveria anomala 1.03 0.15 0.32 0.71 0.1 0.15 0.15 0.15 -0.56 0.18 0.15 0.32 -0.14 0.15 0.22 0.02 0.15 0.28 0.15 0.15 0.15 0.56 0.15 0.15 0.32 0.33 0.15 0.06 0.15 0.32 0.08 0.15 0.07 0.31 0.11 0.08 0.04 0.18 0.01 -0.14 -0.02 -0.14 -0.26 -0.05 -0.23 0.01 0.55 0.09 -0.15 -0.1 -0.04 0.19 -0.14 0.18 -0.33 0.34 -0.51 0.17 -0.43 0.27 -0.2 0.22 -0.19 0.14 0.17 -0.02 -0.02 0.03 -0.07 -0.08 0.1 0.05 -0.08 0.1 -0.12 -0.08 -0.06 -0.16 0.12 0.17 0.11 0.16 0.3 0.02 -0.04 -0.09 -0.07 -0.05 0.04 0.05 0.08 -0.33 -0.03 -0.25 0.01 -0.02 0.03 -0.07 0.01 0.01 -0.14 -0.22 0.03 -0.08 -0.25 -0.38 -0.16 -0.5 -0.01 -0.09 -0.23 -0.35 -0.56 -0.59 0.31 0.1 0.21 0.39 0.32 0.03 0 -0.32 -0.51 -1.09 -0.97 -0.82 -0.16 0.36 0.34 -0.15 0.22 -0.11 0.26 0 0.19 -0.07 -0.27 -0.07 -0.2 -0.03 0.34 -0.18 -0.1 0.1 -0.08 0.64 0.27 -0.04 -0.15 -0.62 -1.17 0.13 0.02 0.13 -0.19 -0.33 -0.34 -0.42 0.01 -0.21 0.18 0.47 0.15 -0.57 -0.27 0.18 0.55 0.17 0.24 0.02 0.16 -0.18 -0.24 0.03 0.06 0.36 0.05 0.04 -0.28 -0.77 -0.54 -0.21 0.09 0.28 0.1 -0.08 0.03 0 0.14 0.07 -0.01 0.31 0.32 0.14 -0.34 -0.08 0.3 -0.3 -0.21 -0.26 -0.14 0.28 0.18 0.37 3.45 -1.59 0.26 -1.81 -0.18 0.03 0.35 0.01 -0.23 -0.42 0.83 At2g35120 266517_at
similar to Glycine cleavage system H protein, mitochondrial precursor from Flaveria anomala 4

formylTHF biosynthesis | glycine degradation I | photorespiration




0.92 5.26