"Pathway" "Pathway.source" "Annotation.score" "p.value.score" "No.of.genes" "p.value.genes" "IN ALL DATA SETS" "sum.of.scores" "sum.of.genes" "ORGAN DATA SET" "quantDE" 0.3719723 "maxDE" 5.6002056 "ORGAN DATA SET" "mono-/sesqui-/di-terpene biosynthesis" "LitPath" 30 2.45954633993802E-021 3 0.00136799851338099 "terpenoid metabolism" "LitPath" 30 2.93545375521896E-021 3 0.00154827113700093 "Phenylpropanoid Metabolism" "BioPath" 20 0.00000000000728290913921609 4 0.00134105122807584 "monoterpene biosynthesis" "LitPath" 20 1.61023253118585E-023 2 0.0000415113572741436 "core phenylpropanoid metabolism" "BioPath" 14 0.0000000000000507294355361227 3 0.0000640365189903258 "monoterpenoid biosynthesis" "TAIR-GO" 10 7.28081505212508E-026 1 0.00000311574526289879 "monoterpene biosynthesis" "AraCyc" 10 1.51589401331462E-024 1 0.00000376221591365692 "plant monoterpene biosynthesis" "AraCyc" 10 3.34545236979504E-027 1 0.00000125470073630858 "STRESS DATA SET" "quantDE" 0.1618543 "maxDE" 1.196898 "STRESS DATA SET" "nucleotide metabolism" "FunCat" 16 0 4 0 "(deoxy)ribose phosphate degradation" "AraCyc" 14 7.35986522339506E-029 3 0.00000000390390963408161 "pyrimidine nucleotide metabolism" "FunCat" 14 1.76035174483831E-018 3 0.0000084304324461052 "Nucleotide Metabolism" "KEGG" 14 0.00000000010067164855919 3 0.00124323011096797 "Pyrimidine metabolism" "KEGG" 14 4.36789449674423E-015 3 0.000103516768439172 "secondary metabolism" "FunCat" 11 0.000000133177161275527 2 0.0128818330852131 "Cell Wall Carbohydrate Metabolism" "BioPath" 10 0.00036835255543443 4 0.0234021442314499 "gibberellic acid biosynthesis" "TAIR-GO" 10 1.79156516499931E-018 1 0.0000854208336035678 "gibberellin biosynthesis" "AraCyc" 10 1.53753764811134E-017 1 0.000294648665516002 "plant / fungal specific systemic sensing and response " "FunCat" 10 0.00000000057425639014122 1 0.0104941494868285 "plant hormonal regulation" "FunCat" 10 0.00000000057425639014122 1 0.0104941494868285 "Diterpenoid biosynthesis" "KEGG" 10 0.00000000000833741672838663 1 0.00251254204533204 "Gibberellin metabolism" "LitPath" 10 0.0000000860523929906308 1 0.0284351102070104 "giberelin biosynthesis" "LitPath" 10 0.00000000196047679296021 1 0.0168992130638153 "Intermediary Carbon Metabolism" "BioPath" 8 0.0000769074852411379 2 0.0457460707779822 "iron-sulfur cluster assembly" "TAIR-GO" 7 0 1 0 "Nitrogen metabolism" "KEGG" 7 0.0000212211449937099 1 0.0174567133318244 "Carotenoid and abscisic acid metabolism" "LitPath" 7 0.000172009372181737 2 0.00359552909893012 "HORMONE DATA SET" "quantDE" 0.4666242 "maxDE" 1.9071143 "HORMONE DATA SET" "mono-/sesqui-/di-terpene biosynthesis" "LitPath" 54 1.39357931283238E-039 6 0.0000105196182494212 "terpenoid metabolism" "LitPath" 54 1.96830105807779E-039 6 0.0000132314119411687 "Miscellaneous acyl lipid metabolism" "AcylLipid" 44 7.90132844898936E-015 16 0.000000211374682913621 "Starch and sucrose metabolism" "KEGG" 42 6.07188157859774E-039 6 0.00000396108434335621 "sexual reproduction" "TAIR-GO" 20 0 5 0 "monoterpene biosynthesis" "LitPath" 20 1.75031969038207E-018 2 0.000211266169627119 "sucrose metabolism" "BioPath" 16 0.000000000000140870484604013 2 0.00389714425893934 "Galactose metabolism" "KEGG" 16 7.95684861717338E-015 2 0.00273329243818663 "biogenesis of cell wall" "FunCat" 14 0.00000000209636928593648 6 0.0000169257171076598 "C-compound and carbohydrate utilization " "FunCat" 14 0 2 0 "jasmonic acid biosynthesis" "TAIR-GO" 10 0.0000000252119686990883 1 0.0167090723217041 "jasmonic acid mediated signaling pathway" "TAIR-GO" 10 0 1 0 "jasmonic acid metabolism" "TAIR-GO" 10 0 1 0 "monoterpenoid biosynthesis" "TAIR-GO" 10 0.0000000000000175346185959695 1 0.00064588290505865 "N-terminal protein myristoylation" "TAIR-GO" 10 0.000000000159917975313975 1 0.00565858763458693 "pentacyclic triterpenoid biosynthesis" "TAIR-GO" 10 0.000000000007755801416507 1 0.00293711135528895 "response to wounding" "TAIR-GO" 10 0.000000354101796880506 1 0.0221408289696098 "jasmonic acid biosynthesis" "AraCyc" 10 0.0000000000000567345940149645 1 0.00123356047904651 "monoterpene biosynthesis" "AraCyc" 10 1.71324423109834E-021 1 0.0000248015760829959 "plant monoterpene biosynthesis" "AraCyc" 10 3.82515896900571E-024 1 0.00000828102485963663 "C-compound, carbohydrate catabolism" "FunCat" 10 0.0000000139471340269433 3 0.00201278203078898 "Biosynthesis of steroids" "KEGG" 10 0.0000286237329358689 1 0.0667666909389712 "sequiterpene biosynthesis" "LitPath" 10 0.0000000000106731922868834 1 0.000825437373197614 "triterpene biosynthesis" "LitPath" 10 0.0000254359765161164 1 0.0322123083013159 "cellulose biosynthesis" "AraCyc" 8 0.0000000118599942628672 2 0.000256342585049871 "lactose degradation IV" "AraCyc" 8 5.68033891077744E-017 2 0.000000721321198230021 "Oxidative phosphorylation" "KEGG" 8 0.000122321491018655 2 0.0290195207545438 "Pentose and glucuronate interconversions" "KEGG" 8 0.00000000457380122400442 2 0.000306280610952806 "MUTANT DATA SET" "quantDE" 0 "maxDE" 4.422423963 "MUTANT DATA SET" "Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone)" "BioPath" 69 0.00000689458644010985 9 0.0276356368682331 "protein synthesis" "FunCat" 66 0.000534702087568977 15 0.00992224023471319 "Folding, Sorting and Degradation" "KEGG" 60 0.000355964308483213 9 0.15489822065164 "Oxidative phosphorylation" "KEGG" 50 0.00000000152323831768152 12 0.000691779048212799 "Gluconeogenesis from lipids in seeds" "BioPath" 49 0.000000840669034400243 9 0.00728207360612722 "Carbon fixation" "KEGG" 46 0.0000819014544729903 9 0.00837785704571005 "Citrate cycle (TCA cycle)" "KEGG" 46 0.0000000000457696198081602 7 0.00415802903410563 "transport facilitation" "FunCat" 44 0 8 0 "Glycolysis / Gluconeogenesis" "KEGG" 43 0.00761759206276424 8 0.0599117705476749 "Pyruvate metabolism" "KEGG" 43 0.00761759206276424 6 0.184641516582185 "Protein folding / chaperonins (chloroplast)" "BioPath" 40 8.25045519342505E-028 5 0.0000944805699730487 "leucine biosynthesis" "AraCyc" 40 4.77367117343292E-033 7 0.00000120373894749245 "development" "TAIR-GO" 39 0.0000553778234016726 5 0.0576048494528384 "Isoprenoid Biosynthesis in the Cytosol and in Mitochondria" "BioPath" 38 0.0397683258669471 5 0.183853398130682 "biogenesis of chloroplast" "FunCat" 38 0.0234002987883124 5 0.235518256602 "Translation factors" "KEGG" 38 0.00187767738387898 9 0.0503165531811459 "sterol biosynthesis" "BioPath" 36 0.00000000655333851329257 4 0.0184564965485964 "TCA cycle -- aerobic respiration" "AraCyc" 36 0.0000000402055590904161 6 0.0198901651466225 "TCA cycle variation VII" "AraCyc" 36 0.00103511441358072 6 0.121088117707426 "TCA cycle variation VIII" "AraCyc" 36 0.000000383784308657155 6 0.0245687981829553 "Glutamate metabolism" "KEGG" 36 0.000532284197717564 5 0.057162751242663 "Proteasome" "KEGG" 33 0.00147145770631728 5 0.118536254129492 "triterpene, sterol, and brassinosteroid metabolism" "LitPath" 33 0.0331065300049672 5 0.242211398650597 "serine-isocitrate lyase pathway" "AraCyc" 32 0.00000793817829236366 5 0.0486956157222082 "Reductive carboxylate cycle (CO2 fixation)" "KEGG" 32 0.00000000000915481453242523 5 0.0012675487839833 "sterol biosynthesis" "TAIR-GO" 30 0.00000605438068867886 3 0.0656515827525168 "acetyl-CoA assimilation" "AraCyc" 30 0.000000122357665201589 5 0.010290600737345 "plant / fungal specific systemic sensing and response " "FunCat" 28 0.00000000813957398256893 3 0.0364828525940437 "plant hormonal regulation" "FunCat" 28 0.00000000813957398256893 3 0.0364828525940437 "Glutathione metabolism" "KEGG" 28 0.00625615518700414 4 0.133838336933157 "ubiquitin-dependent protein catabolism" "TAIR-GO" 27 0.0204454374598534 4 0.21470362899617 "photorespiration" "AraCyc" 27 0.00000000431217326688874 4 0.04870793294287 "degradation " "FunCat" 27 0.0000000124175025442455 4 0.0287343071850182 "transported compounds (substrates)" "FunCat" 27 0 4 0 "Carotenoid biosynthesis" "BioPath" 26 0.0000000000116671632408742 3 0.00315646024473592 "protein folding" "TAIR-GO" 26 0 3 0 "carotenoid biosynthesis" "AraCyc" 26 0.00000000000601829287627673 3 0.00194237573115942 "glyoxylate cycle" "AraCyc" 26 0.000000179219727617534 4 0.0100104729953228 "Glyoxylate and dicarboxylate metabolism" "KEGG" 26 0.000049225972864001 4 0.0319400378039076 "carotenid biosynthesis" "LitPath" 26 0.00000000000664947205711751 3 0.0033338543389874 "Carotenoid and abscisic acid metabolism" "LitPath" 26 0.000000725411667404576 3 0.0378735770878465 "Shikimate pathway" "LitPath" 26 0.00908442480795227 4 0.100350182460883 "biosynthesis of derivatives of homoisopentenyl pyrophosphate " "FunCat" 24 0.0000000991481692320467 3 0.0159203867602647 "ascorbate glutathione cycle" "AraCyc" 23 0.00000000261803456562594 4 0.00183036384453461 "Cysteine metabolism" "KEGG" 23 0.00178510267130078 5 0.0065900526920277 "Glycerolipid metabolism" "KEGG" 23 0.0234728376163533 3 0.163398700446496 "Phosphatidylinositol signaling system" "KEGG" 23 0.0026385368134253 3 0.176373593723297 "Protein folding and associated processing" "KEGG" 23 0.0000125936538477055 3 0.0843341296318035 "Signal Transduction" "KEGG" 23 0.00439514689078727 3 0.189685904290088 "growth" "TAIR-GO" 22 0.017396014276913 3 0.113188220774682 "Pentose phosphate pathway" "KEGG" 22 0.0232670821414298 5 0.0469170064791218 "RNA polymerase" "KEGG" 22 0.00814143543383775 3 0.260286623784432 "proteasome regulatory particle, base subcomplex (sensu Eukaryota)" "TAIR-GO" 21 0.0000000107557351027834 3 0.00526241061297959 "Sulfur metabolism" "KEGG" 21 0.00826009289163323 3 0.0504315785620528 "ascorbic acid biosynthesis" "BioPath" 20 0.0000456958541115789 2 0.132899527233173 "Methionin/SAM/ethylene metabolism from cysteine and aspartate" "BioPath" 20 0.00931635303688778 2 0.276217200340839 "fatty acid biosynthesis" "TAIR-GO" 20 0.00109738329775909 2 0.107308745553553 "aerobic respiration -- electron donors reaction list" "AraCyc" 20 0.000000074848967219168 6 0.000192754194493085 "Calvin cycle" "AraCyc" 20 0.00347356668355881 5 0.0232819108504395 "octane oxidation" "AraCyc" 20 0.00000043797137080462 2 0.0183544355186627 "tRNA charging pathway" "AraCyc" 20 0.0000674294833275154 8 0.00151076558455864 "C-compound and carbohydrate glyoxylate cycle " "FunCat" 20 0 3 0 "glyoxylate cycle" "FunCat" 20 0 3 0 "transport routes " "FunCat" 20 0.000000810833392242493 3 0.0303817616837251 "Aminoacyl-tRNA biosynthesis" "KEGG" 20 0.000193922128646447 8 0.000996209483189141 "metabolism of acyl-lipids in mitochondria" "AcylLipid" 20 0.0000337019015297154 2 0.0422878557874371 "Synthesis of membrane lipids in endomembrane system" "AcylLipid" 20 0.0361851641334573 2 0.224024055870164 "brassinosteroid biosynthesis" "LitPath" 20 0.00249299931689895 2 0.141759887433682 "sterol and brassinosteroid biosynthesis" "LitPath" 20 0.0000474336695149846 2 0.0631006404735752 "regulation of transcription" "TAIR-GO" 19 0 2 0 "response to pathogenic bacteria" "TAIR-GO" 19 0.00000000000455962536991468 2 0.00421076624137979 "fatty acid oxidation pathway" "AraCyc" 19 0.000296318113681637 2 0.100087312389333 "detoxification" "FunCat" 19 0 4 0 "transcription" "FunCat" 19 0.00000000067244870940597 4 0.00171202001893955 "N-Glycan biosynthesis" "KEGG" 19 0.000001358995730573 4 0.00473486318069464 "Chloroplastic protein import via envelope membrane" "BioPath" 18 0.00000675733490423898 4 0.0046145533846265 "Thylakoid biogenesis and photosystem assembly" "BioPath" 18 0.0000000215574177542884 2 0.00652581591011606 "carotenoid biosynthesis" "TAIR-GO" 18 0.00000137796232563961 2 0.0197653945272581 "indoleacetic acid biosynthesis" "TAIR-GO" 18 0.000000000144534640267055 2 0.00421076624137979 "homocysteine and cysteine interconversion" "AraCyc" 18 0.00000000142091837145747 3 0.00194237573115942 "IAA biosynthesis" "AraCyc" 18 0.00000384071948280937 2 0.0308064808649686 "IAA biosynthesis I" "AraCyc" 18 0.0000000115746051418079 2 0.0134308175824117 "isoleucine biosynthesis I" "AraCyc" 18 0.0000000115647898975959 3 0.0126779791541724 "mixed acid fermentation" "AraCyc" 18 0.00679859269924842 4 0.0541792904273808 "valine biosynthesis" "AraCyc" 18 0.0000000115647898975959 3 0.0126779791541724 "Valine, leucine and isoleucine biosynthesis" "KEGG" 18 0.048796285869963 3 0.138575614501691 "calmodulin binding" "TAIR-GO" 17 0.0000261715695056138 2 0.0755893111230138 "electron transport" "TAIR-GO" 17 0.0273527976635056 3 0.0656515827525168 "electron / hydrogen transport " "FunCat" 17 0.00000000000418672544039969 3 0.000285653465972115 "protein degradation " "FunCat" 17 0.0000200634573257101 3 0.0364828525940437 "Chlorophyll a/b binding proteins" "BioPath" 16 0.0166290540077097 2 0.105655454840774 "light harvesting complex" "BioPath" 16 0.00000000212988394824802 2 0.00390323016888433 "chloroplast transport " "FunCat" 16 0.000000269951398110484 2 0.0264002470279978 "nucleotide metabolism" "FunCat" 16 0 3 0 "Pantothenate and CoA biosynthesis" "KEGG" 16 0.0011962416301507 2 0.136754182268896 "photorespiration" "TAIR-GO" 15 0.00000000202636056678858 2 0.00421076624137979 "response to abiotic stimulus" "TAIR-GO" 15 0 2 0 "isoleucine degradation I" "AraCyc" 15 0.0107285499433422 2 0.16899962679867 "isoleucine degradation III" "AraCyc" 15 0.000003212360423224 2 0.0308064808649686 "leucine degradation I" "AraCyc" 15 0.0107285499433422 2 0.16899962679867 "leucine degradation II" "AraCyc" 15 0.000003212360423224 2 0.0308064808649686 "valine degradation I" "AraCyc" 15 0.00814383693338356 2 0.330607632288757 "valine degradation II" "AraCyc" 15 0.00000210453407149331 2 0.076558924777438 "stress response" "FunCat" 15 0 2 0 "chloroplast organization and biogenesis" "TAIR-GO" 14 0.000000000632692854466334 2 0.00793855070541397 "cytoplasmic and nuclear protein degradation" "FunCat" 13 0.0000000004746321997919 2 0.00119711437474462 "Chloroplastic protein turnover" "BioPath" 12 0.0000710529869971507 3 0.00451161791875517 "ClpP protease complex " "BioPath" 12 0.000000129941799464388 3 0.00132770325215102 "Tic apparatus" "BioPath" 12 0.0000000247293802064612 3 0.000774305252407844 "ATP-dependent proteolysis" "TAIR-GO" 12 0.000142861337482127 3 0.00777026870989705 "chloroplastic endopeptidase Clp complex" "TAIR-GO" 12 0.0000000829626117291957 3 0.00105824539928649 "biosynthesis of pyrimidine ribonucleotides" "AraCyc" 12 0.00550557733835963 2 0.154251779251606 "de novo biosynthesis of pyrimidine ribonucleotides" "AraCyc" 12 0.00457599026314377 2 0.139939130977364 "methionine biosynthesis II" "AraCyc" 12 0.0012869432522319 2 0.0383274375684808 "aminoacyl-tRNA-synthetases" "FunCat" 12 0.0000433948395734129 5 0.000879548531743467 "energy" "FunCat" 12 0.00000000000950310636642105 4 0 "response to oxidative stress" "TAIR-GO" 11 0.000000477341549323884 2 0.00421076624137979 "lactose degradation IV" "AraCyc" 11 0.0000000394287834245533 4 0.0000137406028144897 "superpathway of serine and glycine biosynthesis II" "AraCyc" 11 0.00312661828219625 2 0.139939130977364 "MEP (methylerythritol P) pathway, plastids" "LitPath" 11 0.000800598625468446 2 0.0152198464837486 "Other cell wall metabolism related enzymes" "BioPath" 10 0.00000000563232447281084 1 0.00370986104449614 "Plastoquinone biosynthesis" "BioPath" 10 0.000000000000642778756682979 1 0.00370986104449614 "Regulatory enzymes" "BioPath" 10 0.00000102229150978024 1 0.010681599913021 "Tocopherol biosynthesis" "BioPath" 10 0.000219465610399541 1 0.0328172379659642 "Transcriptional regulators (chloroplast)" "BioPath" 10 0.00000000563232447281084 1 0.00370986104449614 "biotin binding" "TAIR-GO" 10 0.0000000907495234154175 1 0.00611776582370179 "carotenoid biosynthesis/TAS" "TAIR-GO" 10 0 1 0 "cell communication" "TAIR-GO" 10 0 1 0 "cell death" "TAIR-GO" 10 0.000269802577361225 1 0.0330226161647177 "chlorophyll catabolism" "TAIR-GO" 10 0.0000136833788221599 1 0.0174049033811485 "defense response to pathogenic bacteria, incompatible interaction" "TAIR-GO" 10 0.000269802577361225 1 0.0522305161136096 "etioplast organization and biogenesis" "TAIR-GO" 10 0 1 0 "gibberellic acid mediated signaling" "TAIR-GO" 10 0.00204262577347632 1 0.0522305161136096 "glutathione metabolism" "TAIR-GO" 10 0 1 0 "glycine catabolism" "TAIR-GO" 10 0 1 0 "hypersensitive response" "TAIR-GO" 10 0.00284047633351819 1 0.0743764988177075 "methionine biosynthesis" "TAIR-GO" 10 0.0000951102560558616 1 0.0330226161647177 "methionine biosynthesis from L-homoserine via cystathione" "TAIR-GO" 10 0 1 0 "plastid organization and biogenesis" "TAIR-GO" 10 0.00000263053328411805 1 0.0330226161647177 "plastoquinone biosynthesis" "TAIR-GO" 10 0.0000000907495234154175 1 0.00611776582370179 "positive regulation of transcription" "TAIR-GO" 10 0.00000935659877859264 1 0.0174049033811485 "protein binding" "TAIR-GO" 10 0.000038530173935055 1 0.0522305161136096 "protein complex assembly" "TAIR-GO" 10 0 1 0 "response to gravity" "TAIR-GO" 10 0 1 0 "response to salicylic acid stimulus" "TAIR-GO" 10 0 1 0 "vitamin E biosynthesis" "TAIR-GO" 10 0.000269802577361225 1 0.0330226161647177 "ascorbate biosynthesis" "AraCyc" 10 0.0000605585014557795 1 0.0965481644384454 "formylTHF biosynthesis" "AraCyc" 10 0.0177639329803567 1 0.291765961112208 "gibberellin biosynthesis" "AraCyc" 10 0.0163845491807015 1 0.157674822545824 "plastoquinone biosynthesis" "AraCyc" 10 0.000000427286731276154 1 0.0195947666508978 "threonine degradation" "AraCyc" 10 0.00345216550175162 3 0.033011517736726 "vitamin E biosynthesis" "AraCyc" 10 0.000805874688937112 1 0.0608985552281728 "degradation of lipids, fatty acids and isoprenoids" "FunCat" 10 0 1 0 "detoxification by modification" "FunCat" 10 0.00000000591051344991254 1 0.0133261964292349 "electron transport and membrane-associated energy conservation " "FunCat" 10 0.000370193802011734 3 0.00203536134054869 "ionic homeostasis " "FunCat" 10 0 1 0 "lipid transport " "FunCat" 10 0.00000447553708014672 1 0.0991154174539214 "pyrimidine nucleotide metabolism" "FunCat" 10 0.01969870653433 2 0.105386442795499 "Replication complex" "KEGG" 10 0.000183891964425062 3 0.00399356848112094 "Tetracycline biosynthesis" "KEGG" 10 0.000039049913295659 1 0.0231281100674956 "chlorophyll biosynthesis" "LitPath" 10 0.0226882283395386 1 0.106237510060903 "chlorophyll catabolism" "LitPath" 10 0.000000938329357149125 1 0.0112938352534169 "chorismate biosynthesis" "LitPath" 10 0.0325273429309577 2 0.0527663296294071 "diterpene biosynthesis" "LitPath" 10 0.00000000510114052255348 1 0.00392299972630234 "Tyr biosynthesis" "LitPath" 10 0 1 0 "abscisic acid mediated signaling" "TAIR-GO" 9 0.000363490808160197 1 0.0330226161647177 "acetate metabolism" "TAIR-GO" 9 0 1 0 "DNA methylation" "TAIR-GO" 9 0 1 0 "flower development" "TAIR-GO" 9 0.00172037046557894 1 0.0522305161136096 "glyoxylate cycle" "TAIR-GO" 9 0 1 0 "induced systemic resistance, jasmonic acid mediated signaling pathway" "TAIR-GO" 9 0 1 0 "jasmonic acid and ethylene-dependent systemic resistance" "TAIR-GO" 9 0.000000315409998093935 1 0.00611776582370179 "jasmonic acid mediated signaling pathway" "TAIR-GO" 9 0 1 0 "negative regulation of signal transduction" "TAIR-GO" 9 0 1 0 "negative regulation of transcription" "TAIR-GO" 9 0 1 0 "nuclear heterochromatin" "TAIR-GO" 9 0 1 0 "phosphoinositide-mediated signaling" "TAIR-GO" 9 0 1 0 "photomorphogenesis" "TAIR-GO" 9 0.000000315409998093935 1 0.0174049033811485 "pollen germination" "TAIR-GO" 9 0.0000306180573199357 1 0.0174049033811485 "pollen tube growth" "TAIR-GO" 9 0.00000562959446797828 1 0.0330226161647177 "protein amino acid adenylylation" "TAIR-GO" 9 0 1 0 "red, far-red light phototransduction" "TAIR-GO" 9 0 1 0 "response to cold" "TAIR-GO" 9 0.0114339936885727 1 0.0988875864707866 "response to jasmonic acid stimulus" "TAIR-GO" 9 0.0129772669696885 1 0.0988875864707866 "RNA interference, production of siRNA" "TAIR-GO" 9 0 1 0 "seed germination" "TAIR-GO" 9 0.0000000000133123107017917 1 0 "signal transduction" "TAIR-GO" 9 0 1 0 "sulfur metabolism" "TAIR-GO" 9 0 1 0 "alanine degradation III" "AraCyc" 9 0.0000000474494107869383 1 0.0101973972008304 "channel / pore class transport" "FunCat" 9 0.00975907275764292 1 0.273713057270006 "fermentation" "FunCat" 9 0.0250657712925834 1 0.22158159321658 "oxidation of fatty acids " "FunCat" 9 0.0000000000425831611736934 1 0.00465221700455578 "1- and 2-Methylnaphthalene degradation" "KEGG" 9 0.00766214294468065 1 0.180961827015968 "carotene biosynthesis" "TAIR-GO" 8 0.000268651714302001 1 0.0174049033811485 "nonphotochemical quenching" "TAIR-GO" 8 0.00000401430899924431 1 0.00611776582370179 "photosynthesis light harvesting" "TAIR-GO" 8 0.0454424667430657 1 0.125261650451963 "photosynthesis light harvesting in photosystem I" "TAIR-GO" 8 0.0148143982061046 1 0.0988875864707866 "photosystem I" "TAIR-GO" 8 0.0148143982061046 1 0.0988875864707866 "photosystem I antenna complex" "TAIR-GO" 8 0 1 0 "protein biosynthesis" "TAIR-GO" 8 0 2 0 "PSII associated light-harvesting complex II" "TAIR-GO" 8 0.00000109887249295144 1 0.00611776582370179 "methylglyoxal degradation" "AraCyc" 8 0.00512834375206401 2 0.0466910231580305 "non-oxidative branch of the pentose phosphate pathway" "AraCyc" 8 0.00582113042520226 2 0.0383274375684808 "oxidative branch of the pentose phosphate pathway" "AraCyc" 8 0.00582113042520226 2 0.0383274375684808 "accessory proteins of photosynthetic electron transport " "FunCat" 8 0.0000000102778333728895 1 0.00465221700455578 "cell wall organization and biogenesis (sensu Magnoliophyta)" "TAIR-GO" 7 0.0000665410617279752 1 0.0174049033811485 "DNA-directed RNA polymerase II, holoenzyme" "TAIR-GO" 7 0 1 0 "isopentenyl diphosphate biosynthesis, mevalonate-independent pathway" "TAIR-GO" 7 0 1 0 "protein amino acid N-linked glycosylation via asparagine" "TAIR-GO" 7 0 1 0 "systemic acquired resistance" "TAIR-GO" 7 0.0282777446554832 1 0.0988875864707866 "systemic acquired resistance, salicylic acid mediated signaling pathway" "TAIR-GO" 7 0.0000248405067994001 1 0.0174049033811485 "rRNA synthesis " "FunCat" 7 0.000000727648416078632 1 0.00465221700455578 "tRNA synthesis " "FunCat" 7 0.00258217321334465 1 0.0777468045360487