Co-Expression Analysis of: CYP701A3 (At5g25900) Institut de Biologie Moléculaire des Plantes


































































































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Hormones etc. Data Set save / view heatmap as: OpenOffice Table annotation details for co-expressed genes can be found to the right of the heatmap


















































































































MS Excel Table


















































































































save / view all data as: Tab delimited Table For further information on the experiments please go to the Genevestigator database using the experiment-ID given in brackets.















































































































shown are a maximum of 50 genes with r>0.5 (If more co-expressed genes with r>0.5 exist, they can be saved as Tab delimited data only) magnitude of change [log2(treatment/control)]    0   0.3   0.6   0.9  1.2   1.5   1.8   2.1   2.4   2.7   >2.99 












































































































greater than zero                                                         












































































































less than zero                                                         












































































































Locus r-value Name Description ethylene, 3h, petiole (13) mock, 30min, seedling (110) IAA, 30min, seedling (110) IAA, 1h, seedling (110) IAA, 3h, seedling (110) zeatin, 30min, seedling (110) zeatin, 1h, seedling (110) zeatin, 3h, seedling (110) GA3, 30min, seedling (110) GA3, 1h, seedling (110) GA3, 3h, seedling (110) ABA, 30min, seedling (110) ABA, 1h, seedling (110) ABA, 3h, seedling (110) MJ, 30min, seedling (110) MJ, 1h, seedling (110) MJ, 3h, seedling (110) ACC, 30min, seedling (110) ACC, 1h, seedling (110) ACC, 3h, seedling (110) BL, 30min, seedling (110) BL, 1h, seedling (110) BL, 3h, seedling (110) ABA, 3 uM, imbided seed (116) ABA, 30 uM, imbided seed (116) GA, 3h, imbibed seed (119) GA, 6h, imbibed seed (119) GA, 9h, imbibed seed (119) GA, 3h, imbibed seed (134) GA, 6h, imbibed seed (134) GA, 9h, imbibed seed (134) GA, 30min, whole plant (99) GA, 60min, whole plant (99) GA, 3h, whole plant (99) IAA, 0.1uM, 1h, seedling (144) IAA, 0.1uM, 3h, seedling (144) IAA, 1uM, 1h, seedling (144) IAA, 1uM, 3h, seedling (144) ppi, 3h, seedling (113) ppi, 12h, seedling (113) uni, 3h, seedling (113) uni, 12h, seedling (113) brz220, 3h, seedling (113) brz220, 12h, seedling (113) brz91, 3h, seedling (113) brz91, 12h, seedling (113) pac, 3h, seedling (113) pac, 12h, seedling (113) px, 3h, seedling (113) px, 12h, seedling (113) pno8, 3h, seedling (113) pno8, 12h, seedling (113) ibup, 3h, seedling (113) B9, 3h, seedling (113) AgNO3, 3h, seedling (113) AVG, 3h, seedling (113) Sal, 3h, seedling (113) MG132, 3h, seedling (113) 246T, 3h, seedling (113) PCIB, 3h, seedling (113) TIBA, 3h, seedling (113) NPA, 3h, seedling (113) CHX, 3h, seedling (113) Colm, 3h, seedling (113) ColPNO8, 3h, seedling (113) ColBrz, 3h, seedling (113) glucose, 8h, seedling (14) sucrose, 8h, seedling (15) deoxyglucose, 8h_seedling (14) methylglucose, 8h, seedling (14) K depleted, whole rosette (97) K depleted, root (97) Sulfate depleted, 2h, root (112) Sulfate depleted, 4h, root (112) Sulfate depleted, 8h, root (112) Sulfate depleted, 12h, root (112) Sulfate depleted, 24h, root (112) mannitol, 8h, seedling (14) CO2, 1000ppm, guard cell enriched (11) CO2, 1000ppm, mature leaf (11) CO2, high light, whole rosette (95) CO2, medium light, whole rosette (95) CO2, low light, whole rosette (95) CO2, 2h, juvenile leaf (151) CO2, 4h, juvenile leaf (151) CO2, 6h, juvenile leaf (151) CO2, 12h, juvenile leaf (151) CO2, 24h, juvenile leaf (151) CO2, 48h, juvenile leaf (151) dark, 45min, seedling (109) dark, 4h, seedling (109) far red, 45min, seedling (109) far red, 4h, seedling (109) red pulse1, seedling (109) red pulse2, seedling (109) red, 45min, seedling (109) red, 4h, seedling (109) blue, 45min, seedling (109) blue, 4h, seedling (109) UV-A pulse1, seedling (109) UV-A pulse2, seedling (109) UV-AB pulse1, seedling (109) UV-AB pulse2, seedling (109) UV-A, 18h, mature leaf (72) UV-B, 18h, mature leaf (72) Locus Probeset Name Description Annotation score GO.keywords FunCat keywords AraCyc annotations KEGG annotations BioPath annotations AcylLipid category Literature annotations Gene family 90% quantile of DE max. DE
At5g25900 1.000 GA3, CYP701A3 Encodes a member of the CYP701A cytochrome p450 family that is involved in later steps of the gibberellin biosynthetic pathway. 0.02 0.04 -0.03 -0.01 0.15 -0.02 0.11 -0.02 -0.05 -0.14 -0.28 -0.05 -0.27 -0.05 -0.23 -0.23 0.24 -0.16 -0.22 0.05 0.1 -0.01 0.09 0.19 0.05 -0.12 -0.55 -0.93 -0.12 -0.55 -0.93 0.06 0.2 0.31 0.1 0.04 0.09 -0.03 0.11 0.23 0.04 0.27 0.42 0.13 0.26 0.18 0.17 0.22 0.24 0.22 0.21 0.19 0.12 0.32 0.95 0.3 0.14 0.15 -0.02 -0.09 0.23 0.03 -0.65 0.36 0.45 0.26 -0.09 -0.45 0.39 0.26 -0.61 -0.12 0.02 -0.08 -0.06 0.06 0.12 0.26 -0.21 0.44 0.23 0.13 0.04 0.18 -0.04 0.15 -0.04 -0.04 0.1 -0.28 -0.18 -0.2 -0.08 -0.35 0.09 -0.27 0.21 -0.33 -0.06 -0.18 0.19 -0.59 0.28 -0.3 -0.85 At5g25900 246864_at GA3, CYP701A3 Encodes a member of the CYP701A cytochrome p450 family that is involved in later steps of the gibberellin biosynthetic pathway. 10 gibberellic acid biosynthesis | ent-kaurene oxidase activity | oxygen binding | microsome | gibberellic acid mediated signaling biosynthesis of derivatives of homoisopentenyl pyrophosphate | plant / fungal specific systemic sensing and response | plant hormonal regulation
Diterpenoid biosynthesis

Gibberellin metabolism | giberelin biosynthesis cytochrome P450 family, multifunctional ent-kaurene oxidase, gibberellin biosynthesis 0.94 1.88
At1g50480 0.665 THFS 10-formyltetrahydrofolate synthetase (THFS) 0.19 0 -0.05 0.03 -0.13 0.14 -0.07 -0.35 0.24 0.14 -0.05 0.11 -0.14 -0.25 0 -0.03 -0.04 0.03 -0.02 0.02 0.17 -0.07 -0.08 -0.01 0.02 -0.1 -0.05 -0.44 -0.1 -0.05 -0.44 0.01 -0.06 -0.23 0.07 -0.09 0.02 -0.39 0.16 0.22 0.17 0.15 0.18 0.2 0.18 0.19 0.21 0.15 0.22 0.25 0.07 0.17 0.33 0.31 0.2 0.06 0.01 0.26 0.28 0 0.19 0.1 -0.89 0.38 0.24 0.36 -0.17 -0.16 0 0.13 -0.91 0.17 0.05 0.08 -0.15 -0.1 0.05 -0.08 -0.11 0.4 0.25 0.19 -0.2 0.09 0.02 0.02 -0.11 0.06 0.06 0 0.11 -0.14 0.02 -0.19 0.01 -0.08 0.01 -0.09 -0.14 -0.06 -0.13 -0.13 -0.12 -0.27 -0.66 At1g50480 261864_s_at (m) THFS 10-formyltetrahydrofolate synthetase (THFS) 6

formylTHF biosynthesis | glycine degradation I | carbon monoxide dehydrogenase pathway | acetate fermentation




0.66 1.32
At3g01910 0.617 SOX sulfite oxidase -0.04 0.02 0.09 0.04 -0.08 0.13 -0.07 -0.05 0.19 0.05 -0.03 0.11 -0.09 0 0.04 0.04 0.09 -0.04 0.03 0.01 0.07 -0.07 -0.04 0.12 0.02 0.08 -0.25 -0.49 0.08 -0.25 -0.49 -0.02 -0.09 -0.18 0.03 -0.05 0.08 -0.36 0.21 0.06 0.24 0.12 0.15 0.16 0.09 0.08 0.2 0.12 0.07 0.14 0.13 0.13 0.07 0.25 0.11 0.14 0.26 0.27 0.08 0.02 0.06 0.07 -0.43 0.19 -0.03 0.12 -0.22 -0.1 -0.1 -0.02 -0.12 -0.12 0.03 0.09 -0.03 0.04 -0.03 -0.05 0 -0.15 0.17 0.02 -0.07 0.04 0.1 0.05 -0.02 0.06 0 -0.09 -0.07 -0.1 0.01 -0.17 -0.11 -0.14 0.01 -0.02 0.02 -0.06 0.01 -0.14 -0.1 -0.13 -0.16 At3g01910 258948_at SOX sulfite oxidase 6

sulfur oxidation Sulfur metabolism



0.44 0.76
At1g27130 0.605 ATGSTU13 Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). 0.31 -0.02 0 0.05 0 -0.05 -0.13 -0.32 -0.12 -0.06 -0.01 0.08 -0.05 -0.21 -0.02 0.23 0.51 0.03 0.05 0.2 -0.02 -0.13 -0.21 0.39 0.39 -0.05 -0.28 -1.09 -0.05 -0.28 -1.09 0.13 -0.07 -0.32 0.02 -0.09 0.18 -0.36 0.04 -0.11 0.16 -0.26 0.05 -0.22 -0.05 -0.18 0.13 -0.23 0.19 0.05 0.28 -0.25 0.17 0.2 1.43 0.3 0.26 0 -0.04 0.03 0.64 0.06 0.05 0.33 0.61 0.3 -0.04 -0.08 -0.11 -0.37 -0.71 0.28 -0.03 -0.13 -0.1 -0.05 -0.01 0.14 -0.49 -0.27 0.48 0.02 0.12 -0.07 -0.1 0.12 0 -0.06 0.13 -0.03 0.22 -0.12 -0.19 -0.22 0.3 -0.12 0.22 -0.14 0.08 -0.17 0.22 0.04 0.03 0.26 -0.47 At1g27130 264986_at ATGSTU13 Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). 2 toxin catabolism





Glutathione S-transferase, Tau family 0.75 2.53
At5g08100 0.598
L-asparaginase / L-asparagine amidohydrolase 0.09 -0.03 0 -0.06 -0.27 0.08 -0.07 -0.32 0.14 -0.07 -0.04 -0.09 -0.28 -0.25 -0.17 -0.27 -0.24 0.04 -0.2 -0.16 0.01 -0.26 -0.15 -0.04 -0.05 -0.09 -0.23 -0.69 -0.09 -0.23 -0.69 -0.06 -0.05 0.22 0.13 0 -0.12 -0.53 0.17 0.32 0.24 0.37 0.19 0.24 0.15 0.09 0.24 0.21 0.21 0.12 0.18 0.1 0.25 0.27 0.04 0.12 0.24 0.3 0.14 -0.08 -0.06 0.16 -0.35 0.34 -0.02 0.27 0.06 -0.11 -0.15 -0.17 -0.01 -0.3 0.06 -0.01 -0.11 -0.01 0.09 -0.25 0.41 0.74 0.41 0.33 0.08 -0.03 -0.14 0.04 0.01 0.11 0.05 -0.12 0.41 -0.13 0.01 -0.14 0.23 -0.11 0.11 -0.1 0.12 -0.1 0.26 -0.21 0.04 -0.2 -0.54 At5g08100 250547_at
L-asparaginase / L-asparagine amidohydrolase 6
amino acid metabolism asparagine degradation I Nitrogen metabolism | Alanine and aspartate metabolism | Cyanoamino acid metabolism



0.66 1.43
At1g62380 0.597 ACO2 Encodes a protein similar to 1-aminocyclopropane-1-carboxylic oxidase (ACC oxidase). Expression of the AtACO2 transcripts is affected by ethylene. 0.72 0.02 0.09 0.07 0.08 0.15 0.1 -0.4 -0.03 -0.03 -0.38 -0.16 -0.42 -0.39 -0.08 -0.46 -0.57 -0.09 -0.39 -0.24 -0.24 -0.47 -0.68 0.06 -0.18 0.05 -1.54 -1.83 0.05 -1.54 -1.83 -0.01 -0.02 0.28 0.13 0.28 0.09 -0.04 0.39 0.15 0.46 0.43 0.23 0.23 0.39 0.01 0.17 0.08 0.39 0.04 0.23 0.01 0.49 0.61 0.26 0.12 0.27 0.28 0.31 0.49 0.3 0.13 -0.4 0.23 0.11 0.48 0.3 0.04 0.15 0.21 -1.12 0.23 -0.07 0.08 -0.01 -0.15 -0.31 0.21 0.25 0.56 0.41 -0.16 0.36 0.04 0.06 0.2 0.11 -0.08 -0.05 0.04 0.4 0.05 0.13 -0.01 0.25 0.06 -0.08 0.17 0.12 0.01 0.21 0.1 0.03 -0.04 0.23 At1g62380 260637_at ACO2 Encodes a protein similar to 1-aminocyclopropane-1-carboxylic oxidase (ACC oxidase). Expression of the AtACO2 transcripts is affected by ethylene. 6 detection of ethylene stimulus


Biosynthesis of Amino Acids and Derivatives | Methionin/SAM/ethylene metabolism from cysteine and aspartate


1.14 2.55
At1g15130 0.594
hydroxyproline-rich glycoprotein family protein -0.05 -0.06 -0.12 -0.05 0.07 -0.01 -0.14 -0.27 0.07 0.08 -0.15 -0.14 -0.18 -0.02 -0.02 -0.07 -0.28 0.22 -0.28 -0.08 0.14 -0.13 -0.07 0.22 0.15 -0.03 -0.5 -0.95 -0.03 -0.5 -0.95 -0.24 0.06 -0.15 0.17 0.06 0 -0.41 0.18 0.16 0.11 0.25 0 0.07 0.03 0.28 0.28 0.2 0.28 0.25 0.02 0.09 -0.12 0.19 0.33 0.04 0.46 0.12 0.1 0.26 0.32 0.12 0.06 -0.01 -0.06 0.14 0.25 0.14 0.16 0.41 -0.14 0.03 -0.06 0.15 -0.14 0.01 0.13 0.28 0.38 -0.04 -0.07 0.5 -0.04 0.18 0 -0.3 0.05 0.08 -0.03 -0.06 0.23 -0.1 -0.12 0.03 -0.03 -0.07 -0.07 -0.1 -0.12 -0.07 0 -0.25 0.34 -0.63 -0.44 At1g15130 262588_at
hydroxyproline-rich glycoprotein family protein 2

folate biosynthesis




0.77 1.45
At2g02930 0.594 ATGSTF3 Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002). 0.56 -0.16 -0.11 -0.15 0.32 -0.15 -0.42 -0.4 0.08 -0.09 0.13 -0.14 -0.38 -0.43 -0.24 0.1 -0.22 0.15 -0.09 0.32 0.11 0.06 -0.08 0.21 0.24 -0.39 -1.96 -2.96 -0.39 -1.96 -2.96 -0.34 0.13 -0.86 -0.12 -0.12 -0.3 0.22 0.13 0.49 0.17 0.83 -0.02 0.6 0.24 0.63 0.1 0.37 0.2 0.12 0.33 0.57 -0.11 -0.14 1.34 -0.27 0.37 -0.1 -0.12 -0.23 0.37 -0.11 0 0.26 1.12 0.38 0.17 -1.03 0.7 0.57 0.03 0.36 -0.12 0.37 0.03 -0.32 -0.5 1.01 -0.8 0.05 1.63 1.03 1.08 -0.19 0.06 -0.18 -0.32 -0.43 -0.31 0.1 0.55 -0.14 -0.04 0 0.32 -0.19 0.18 -0.05 0.33 0.09 0.22 0.15 0.3 0.11 0.4 At2g02930 266746_s_at (m) ATGSTF3 Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002). 2 toxin catabolism

Glutathione metabolism Biosynthesis of Amino Acids and Derivatives | Glutathione metabolism

Glutathione S-transferase, Phi family 1.82 4.58
At4g02520 0.594 ATGSTF2 Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002). 0.56 -0.16 -0.11 -0.15 0.32 -0.15 -0.42 -0.4 0.08 -0.09 0.13 -0.14 -0.38 -0.43 -0.24 0.1 -0.22 0.15 -0.09 0.32 0.11 0.06 -0.08 0.21 0.24 -0.39 -1.96 -2.96 -0.39 -1.96 -2.96 -0.34 0.13 -0.86 -0.12 -0.12 -0.3 0.22 0.13 0.49 0.17 0.83 -0.02 0.6 0.24 0.63 0.1 0.37 0.2 0.12 0.33 0.57 -0.11 -0.14 1.34 -0.27 0.37 -0.1 -0.12 -0.23 0.37 -0.11 0 0.26 1.12 0.38 0.17 -1.03 0.7 0.57 0.03 0.36 -0.12 0.37 0.03 -0.32 -0.5 1.01 -0.8 0.05 1.63 1.03 1.08 -0.19 0.06 -0.18 -0.32 -0.43 -0.31 0.1 0.55 -0.14 -0.04 0 0.32 -0.19 0.18 -0.05 0.33 0.09 0.22 0.15 0.3 0.11 0.4 At4g02520 266746_s_at (m) ATGSTF2 Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002). 10 glutathione transferase activity | toxin catabolism biosynthesis of secondary products derived from L-phenylalanine and L-tyrosine | biosynthesis of phenylpropanoids
Glutathione metabolism Biosynthesis of Amino Acids and Derivatives | Glutathione metabolism

Glutathione S-transferase, Phi family 1.82 4.58
At4g38570 0.587
similar to phosphatidylinositol synthase (PIS1) - Arabidopsis thaliana 0.04 0.01 0.05 0.03 0.01 0.19 -0.11 -0.09 0.12 -0.11 -0.08 0.16 -0.34 0.01 0.05 -0.06 -0.07 0.22 0.02 0.03 0.03 -0.08 0.01 0.26 0.3 -0.28 -0.39 -0.95 -0.28 -0.39 -0.95 -0.16 -0.05 -0.04 -0.03 -0.02 0.1 -0.4 -0.08 0.49 -0.06 0.33 -0.02 0.33 0.01 0.28 -0.1 0.24 0.14 0.08 0.07 0.28 -0.24 0.04 -0.23 0.09 0.03 0.18 -0.01 -0.13 -0.07 -0.04 -0.18 0.56 0.19 0.53 0.16 -0.51 0.38 0.39 -0.03 0.33 0.01 0.02 0.08 0.18 -0.04 0.35 0.61 0.42 -0.06 -0.13 -0.37 -0.06 0.04 -0.13 0.1 -0.04 0.14 0.01 0.34 0.04 -0.13 0.05 0.08 -0.01 0.2 0.02 -0.15 -0.03 0.24 -0.16 -0.05 -0.51 -1.26 At4g38570 252953_at
similar to phosphatidylinositol synthase (PIS1) - Arabidopsis thaliana 4 phosphatidylinositol biosynthesis lipid, fatty acid and isoprenoid biosynthesis phospholipid biosynthesis II Glycerophospholipid metabolism | Signal Transduction | Phosphatidylinositol signaling system Cell Wall Carbohydrate Metabolism | Phytic acid biosynthesis Synthesis of membrane lipids in endomembrane system

0.79 1.86
At1g07240 0.585
UDP-glucoronosyl/UDP-glucosyl transferase family protein 0.23 -0.01 -0.17 -0.05 0.27 -0.15 -0.15 -0.48 -0.18 -0.08 0.34 -0.39 -0.38 -0.21 -0.48 -0.3 0.35 -0.12 -0.28 0.53 -0.53 -0.15 0.23 0.07 -0.04 -0.38 -1 -1.04 -0.38 -1 -1.04 0.2 0.44 -0.16 0.22 0.06 0.25 -0.45 0.17 0.55 0.08 0.42 -0.19 0.19 0.07 0.27 0.16 0.31 0.06 -0.25 0.27 0.43 0.26 0.08 1.52 -0.03 0.65 -0.42 0.09 0.03 0.74 0.37 0.56 0.12 0.57 -0.16 -0.34 0.41 0.05 -0.14 -0.22 0.16 0.08 0.03 0 -0.04 -0.02 0.08 -0.42 0.09 0.56 0 0.5 0.04 -0.27 0.01 0.09 -0.23 -0.14 -0.04 -0.02 -0.23 0.1 -0.03 -0.01 -0.25 0.03 -0.06 0.09 -0.14 0.05 0.14 0.15 -0.03 -0.55 At1g07240 256058_at
UDP-glucoronosyl/UDP-glucosyl transferase family protein 1






Glycosyl transferase, Family 1 1.07 2.56
At3g53180 0.576
similar to glutamine synthetase (Bacillus subtilis) 0.16 -0.02 0.1 0.03 0.09 0.08 0.07 0.09 0.01 -0.09 -0.01 -0.17 0.05 0.68 -0.02 0.23 0.41 -0.22 -0.08 -0.03 -0.14 -0.26 -0.28 0.11 0.39 -0.09 -0.34 -0.73 -0.09 -0.34 -0.73 -0.16 -0.01 -0.19 -0.08 -0.17 -0.1 -0.45 0.16 0.16 0 0.21 -0.07 -0.05 -0.06 -0.13 -0.12 -0.01 0.05 -0.07 0.18 -0.03 0.02 -0.15 1.8 -0.18 0.07 -0.2 -0.12 -0.1 0.15 -0.05 0.01 0.23 0.53 0.18 0.12 -0.11 0.53 0.41 -0.52 0.15 0.08 0.09 -0.1 -0.15 0.01 0.52 -0.51 -0.22 0.19 0.2 -0.17 0.24 0.11 -0.25 -0.03 0.18 0 -0.14 0.12 -0.13 -0.09 -0.2 -0.02 -0.21 0.03 -0.15 0.08 -0.11 0.08 -0.23 0.13 -0.17 0.11 At3g53180 251973_at
similar to glutamine synthetase (Bacillus subtilis) 2
amino acid metabolism | assimilation of ammonia, metabolism of the glutamate group | nitrogen and sulfur metabolism glutamine biosynthesis I | ammonia assimilation cycle | nitrate assimilation pathway




0.76 2.53
At4g19860 0.570
lecithin:cholesterol acyltransferase family protein / LACT family protein, similar to lysosomal phospholipase A2 (Mus musculus) -0.01 0.06 0.02 -0.25 0.16 -0.02 -0.48 -0.42 -0.04 0.14 0.1 -0.12 0 1.11 -0.31 -0.7 -0.36 -0.26 -0.19 0.06 -0.35 -0.3 -0.51 0.2 0.5 -0.34 -0.61 -0.85 -0.34 -0.61 -0.85 -0.21 -0.07 -0.16 -0.07 -0.09 -0.25 -0.4 0.1 0.68 0.34 1 0.09 0.54 0.28 0.67 0.33 0.59 0.64 0.31 0.12 0.56 -0.09 0.06 0.17 0.22 -0.06 -0.24 -0.26 -0.18 0 0.06 -0.56 0.69 0.39 0.75 -0.18 -0.54 0.16 0.23 -0.36 0.06 -0.09 0.34 -0.12 -0.12 -0.02 0.37 -0.28 -0.28 0.38 0.27 -0.02 0.15 -0.01 0.08 -0.1 0.13 0.32 0.09 0.31 -0.03 -0.09 0.06 0.01 0.07 0.09 0.03 -0.1 0.14 0.17 -0.04 -0.21 -0.34 -0.9 At4g19860 254547_at
lecithin:cholesterol acyltransferase family protein / LACT family protein, similar to lysosomal phospholipase A2 (Mus musculus) 2




Miscellaneous acyl lipid metabolism

1.27 2.01
At5g36160 0.570
aminotransferase-related, similar to nicotianamine aminotransferase B (Hordeum vulgare subsp. vulgare) -0.11 0.15 0.12 -0.13 -0.32 0.02 -0.03 -0.14 -0.04 -0.27 -0.99 -0.12 -0.09 0.42 -0.04 -0.21 0.51 -0.13 -0.06 -0.01 -0.21 -0.25 -0.16 0.6 0.28 -0.22 -1.44 -2.66 -0.22 -1.44 -2.66 0.09 0.02 -0.34 -0.19 -0.12 0.01 -0.38 0.77 0.06 0.74 -0.12 0.78 0.17 0.75 0.12 0.47 0.04 0.46 0.31 0.89 0.1 0.61 0.47 0.65 0.61 0.78 0.79 0.88 0.19 0.64 0.61 -0.79 0.71 0.69 0.47 -0.13 -0.49 0.11 0.06 -0.24 -0.08 0.12 -0.02 0.44 0.05 -0.41 0.15 -0.73 -0.87 0.22 0.21 -0.36 0.15 0.18 0.24 0.23 0.28 0.04 0.01 -1.09 -0.12 0.19 -0.08 -0.67 0.17 -0.14 -0.07 0.13 -0.33 -0.44 -0.17 0.14 0.05 1.15 At5g36160 249688_at
aminotransferase-related, similar to nicotianamine aminotransferase B (Hordeum vulgare subsp. vulgare) 2
nitrogen and sulfur utilization phenylalanine biosynthesis II | phenylalanine degradation I | tyrosine degradation




1.74 3.82
At1g20560 0.567
AMP-dependent synthetase and ligase family protein 0.02 -0.02 -0.33 -0.11 -0.17 -0.3 -0.24 -0.11 0.01 -0.04 -0.3 -0.19 -0.1 0.74 -0.23 -0.12 0.38 -0.34 -0.04 -0.09 -0.22 -0.36 -0.33 -0.08 0.05 -0.5 -0.67 -0.8 -0.5 -0.67 -0.8 0.12 -0.01 -0.41 -0.26 -0.1 -0.14 -0.52 0.42 0.26 0.47 0.53 0.35 0.34 0.26 0.16 0.2 0.45 0.41 0.14 0.54 0.33 0.28 -0.09 0.96 0.21 0.63 0.17 0.38 -0.5 0.93 0.45 -0.64 0.38 1.07 0.72 -0.1 0.14 0.05 0.19 -0.51 -0.49 0 0.03 0.28 -0.11 -0.25 0.28 0.17 -0.17 -0.18 -0.37 -0.51 0 -0.03 0 0.06 0.04 -0.06 0.14 -0.12 -0.3 -0.12 -0.05 -0.45 -0.05 -0.25 -0.12 0.05 0.18 0.25 0.26 0.18 0.16 -0.28 At1g20560 259545_at
AMP-dependent synthetase and ligase family protein 2

carnitine metabolism-- CoA-linked



Acyl activating enzymes , CoA ligases, clade VI 1.12 1.88
At5g54080 0.567 HGO homogentisate 1,2-dioxygenase / homogentisicase/homogentisate oxygenase / homogentisic acid oxidase 0.13 -0.01 -0.28 0.06 0.01 -0.12 -0.27 -0.55 -0.15 -0.18 -0.12 0.04 0.32 1.51 -0.43 -0.28 -0.04 -0.1 -0.19 -0.27 -0.12 0.22 -0.55 0.33 0.55 -0.74 -0.67 -1.71 -0.74 -0.67 -1.71 -0.36 0.08 -0.41 -0.32 -0.15 -0.39 -0.28 -0.05 0.56 -0.04 0.8 -0.06 0.52 0.22 0.51 0.17 0.28 0.45 0.22 0.11 0.56 -0.18 0.04 0.88 0.07 0.63 -0.5 -0.08 0 0.33 -0.36 -0.64 0.62 1.29 0.88 -0.52 -1.34 1.01 0.96 0.64 0.96 -0.12 0.27 0.2 0.07 0.21 1.24 -0.44 -0.35 -0.17 0.1 -0.18 0.14 -0.27 -0.1 -0.21 0.18 0.35 -0.02 0.79 0.03 -0.15 -0.04 0.39 0.08 0.19 -0.22 -0.28 -0.23 -0.02 -0.33 -0.52 -0.23 -0.75 At5g54080 248193_at HGO homogentisate 1,2-dioxygenase / homogentisicase/homogentisate oxygenase / homogentisic acid oxidase 6

phenylalanine degradation I | tyrosine degradation Tyrosine metabolism | Styrene degradation



1.66 3.22
At3g28710 0.566
H+-transporting two-sector ATPase, putative 0.01 0.04 -0.07 0.06 0.12 -0.11 -0.3 -0.02 0.26 -0.02 0.19 0.21 -0.03 0.09 0.09 -0.01 0.17 -0.06 -0.02 0.14 0.18 -0.13 0.3 0.01 -0.06 -0.11 -0.23 -0.59 -0.11 -0.23 -0.59 0.01 -0.04 -0.38 0.2 0.05 0.19 -0.22 0.05 0.27 0.17 0.24 0.13 -0.04 0.11 0.04 0.05 0.09 -0.01 0.08 0.04 0.16 -0.24 -0.05 -0.1 -0.04 -0.01 -0.05 -0.07 -0.13 -0.15 -0.15 -0.47 0.24 0.01 0.24 -0.06 -0.13 0.27 0.19 -0.21 0.05 0.07 -0.04 0.21 0.12 -0.01 0.14 0.08 0 0.41 -0.17 0.12 -0.01 0.13 0.11 0.01 0.16 -0.02 0 0.13 -0.08 0.04 -0.1 0.08 -0.11 0.15 -0.07 -0.01 -0.14 0.03 -0.28 0.02 0.12 -0.56 At3g28710 256988_s_at (m)
H+-transporting two-sector ATPase, putative 4


ATP synthesis



0.54 1.00
At3g28715 0.566
H+-transporting two-sector ATPase, putative 0.01 0.04 -0.07 0.06 0.12 -0.11 -0.3 -0.02 0.26 -0.02 0.19 0.21 -0.03 0.09 0.09 -0.01 0.17 -0.06 -0.02 0.14 0.18 -0.13 0.3 0.01 -0.06 -0.11 -0.23 -0.59 -0.11 -0.23 -0.59 0.01 -0.04 -0.38 0.2 0.05 0.19 -0.22 0.05 0.27 0.17 0.24 0.13 -0.04 0.11 0.04 0.05 0.09 -0.01 0.08 0.04 0.16 -0.24 -0.05 -0.1 -0.04 -0.01 -0.05 -0.07 -0.13 -0.15 -0.15 -0.47 0.24 0.01 0.24 -0.06 -0.13 0.27 0.19 -0.21 0.05 0.07 -0.04 0.21 0.12 -0.01 0.14 0.08 0 0.41 -0.17 0.12 -0.01 0.13 0.11 0.01 0.16 -0.02 0 0.13 -0.08 0.04 -0.1 0.08 -0.11 0.15 -0.07 -0.01 -0.14 0.03 -0.28 0.02 0.12 -0.56 At3g28715 256988_s_at (m)
H+-transporting two-sector ATPase, putative 4


ATP synthesis



0.54 1.00
At1g12230 0.561
Similar to transaldolase B (EC 2.2.1.2) from Escherichia coli 0.33 0.06 0.19 -0.03 -0.04 0.02 -0.03 -0.11 -0.03 -0.02 0.01 -0.11 0.06 -0.03 -0.06 -0.1 0.19 -0.12 -0.04 0.07 -0.22 -0.2 -0.03 -0.05 -0.11 0.1 -0.27 -0.74 0.1 -0.27 -0.74 0.02 -0.2 -0.22 -0.1 -0.17 0.12 -0.36 0.08 0.3 0.03 0.39 0.08 0.3 0.11 0.36 0.04 0.38 0.2 0.22 0.14 0.33 -0.14 0.07 0.02 0.06 -0.06 -0.04 -0.05 -0.28 -0.04 0.19 -1.03 0.26 0.08 0.39 0.02 -0.49 0.12 0.34 -0.56 -0.43 -0.03 0.07 0.21 0.05 -0.18 0.41 0 0.11 -0.09 -0.51 -0.12 -0.03 0.05 0.23 0.19 0.04 0.11 0 0.75 0.04 0.28 0.11 0.18 -0.03 0.08 -0.07 -0.23 -0.07 0.28 -0.14 0.21 0.31 -0.47 At1g12230 260967_at
Similar to transaldolase B (EC 2.2.1.2) from Escherichia coli 2

non-oxidative branch of the pentose phosphate pathway Pentose phosphate pathway



0.84 1.77
At5g07830 0.554
glycosyl hydrolase family 79 N-terminal domain-containing protein, similar to beta-glucuronidase (Scutellaria baicalensis) -0.01 0.04 -0.04 -0.09 -0.32 0.1 0.04 -0.03 -0.08 0.09 -0.3 -0.01 -0.26 0.44 -0.27 -0.08 -0.47 -0.08 -0.1 -0.06 -0.05 0.2 0.11 0.28 0.42 -0.1 -0.86 -1.36 -0.1 -0.86 -1.36 0.26 0.59 0.06 -0.13 -0.24 -0.07 -0.41 0.1 0.14 0.05 0.28 0.13 0.28 -0.03 0.23 0.19 0.38 -0.1 -0.15 -0.14 0.13 0.23 0.04 0.53 0 -0.27 -0.03 -0.12 -0.11 -0.19 0.27 -0.47 0.48 0.06 0.42 0.39 0.3 0.06 0 -0.07 -0.18 0.13 0 -0.27 0.15 0.12 0.08 0.32 -0.09 0.47 0.34 -0.19 -0.03 0.07 0.14 -0.12 0.04 0.26 -0.06 0.1 0.23 -0.02 0 0.03 0.08 0.13 0.03 0.05 -0.09 0.18 -0.04 -0.03 0.28 -0.02 At5g07830 250604_at
glycosyl hydrolase family 79 N-terminal domain-containing protein, similar to beta-glucuronidase (Scutellaria baicalensis) 1

beta;-D-glucuronide degradation




0.88 1.95
At3g04880 0.550 DRT102 encodes a novel protein involved in DNA repair from UV damage. Isolated by functional complementation of E. coli UV-sensitive mutants (UVR genes). 0.18 0.02 -0.03 0.06 0.17 0.08 0.25 -0.13 0.07 0.12 -0.07 0.09 -0.06 -0.94 0.13 0.31 -0.08 0.22 0.25 -0.03 0.17 0 -0.01 0.25 0.52 -0.15 -0.75 -1.05 -0.15 -0.75 -1.05 -0.21 0.05 0 0.19 0.27 0.28 -0.09 0.13 0.27 0.24 0.37 0.05 0.14 0.23 0.24 0.4 0.15 0.12 0.03 -0.09 0.08 -0.26 0.11 0.49 0.05 0.19 -0.26 -0.2 -0.32 -0.22 -0.11 -1.8 0.07 -0.06 0.03 -0.17 0.32 0.01 0.01 0.53 0.38 -0.14 -0.02 -0.13 0 0.21 0.07 -0.03 0.5 0.4 0.13 -0.36 -0.06 0.08 0.07 0.02 -0.01 0.08 -0.05 0.32 -0.07 -0.11 -0.13 0.37 -0.15 0.4 0.07 0.09 -0.18 0.06 -0.09 0.07 0.01 -0.67 At3g04880 259100_a (m) DRT102 encodes a novel protein involved in DNA repair from UV damage. Isolated by functional complementation of E. coli UV-sensitive mutants (UVR genes). 7 response to UV | photoreactive repair
Calvin cycle | ribose degradation | non-oxidative branch of the pentose phosphate pathway | superpathway of gluconate degradation




1.13 2.33
At5g07200 0.546 YAP169 gibberellin 20-oxidase 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.3 -0.03 -0.91 -2.09 -2.92 -0.91 -2.09 -2.92 0.14 0.14 0.14 0.14 0.14 0.14 -0.28 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 -1.21 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 At5g07200 250611_at YAP169 gibberellin 20-oxidase 10 gibberellic acid biosynthesis | gibberellin 20-oxidase activity secondary metabolism | plant / fungal specific systemic sensing and response | plant hormonal regulation gibberellin biosynthesis Diterpenoid biosynthesis

Gibberellin metabolism | giberelin biosynthesis
1.05 3.23
At4g03050 0.531 AOP3 encodes a 2-oxoglutarate-dependent dioxygenase that catalyzes the conversion of methylsulfinylalkyl glucosinolates to hydroxyalkyl glucosinolates. involved in glucosinolate biosynthesis and secondary metabolism. 0.12 0.12 -0.63 0.12 0.12 -0.63 0.75 0.12 -0.63 0.12 0.12 -0.63 0.12 1.39 0.02 0.12 0.12 -0.63 0.12 0.12 0.28 0.12 0.12 0.14 -0.36 -1.22 -1.76 -2.6 -1.22 -1.76 -2.6 0.12 0.12 1.22 0.12 0.12 0.12 0.46 0.03 -0.18 0.12 0.12 0.12 0.12 0.12 0.12 0.12 0.59 0.12 0.12 0.12 0.12 0.12 0.12 0.12 0.12 0.12 0.12 0.12 0.12 0.12 0.12 0.12 0.97 0.83 0.12 0.12 0.12 0.12 0.12 -0.41 -1.01 0.12 0.12 0.12 0.12 0.12 0.12 0.12 0.12 0.12 0.12 0.12 0.12 0.12 0.12 0.12 0.12 0.12 0.12 0.12 0.12 0.12 0.12 0.12 0.12 0.12 0.12 0.12 0.12 0.12 0.12 0.12 0.12 0.12 At4g03050 255471_at AOP3 encodes a 2-oxoglutarate-dependent dioxygenase that catalyzes the conversion of methylsulfinylalkyl glucosinolates to hydroxyalkyl glucosinolates. involved in glucosinolate biosynthesis and secondary metabolism. 10 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | glucosinolate biosynthesis secondary metabolism glucosinolate biosynthesis from homomethionine


Glucosinolate Metabolism
1.75 3.98
At5g64370 0.530
PYD3 encodes a beta-ureidopropionase which, when expressed in E. coli, has been shown to convert beta-ureidopropionate into beta-alanine. 0.13 -0.05 -0.25 -0.2 0.23 -0.03 -0.16 -0.22 -0.03 0.01 -0.02 -0.22 -0.18 0.5 -0.3 -0.09 -0.1 -0.09 -0.06 0.09 -0.19 -0.05 -0.22 -0.14 0.03 -0.2 -0.11 -0.6 -0.2 -0.11 -0.6 -0.27 -0.18 -0.42 -0.14 -0.11 -0.13 -0.37 0.33 0.08 0.33 0.2 0.39 0.03 0.34 0.01 0.37 0.19 0.62 0.09 0.23 0.04 0.06 0.35 0.73 0.3 1.13 -0.01 0.03 0.2 0.16 0.13 -0.89 0.56 0.6 0.5 -0.17 0.15 -0.09 -0.1 0 -0.09 -0.01 -0.01 -0.05 0.08 -0.1 0.16 0.05 -0.36 0.28 -0.13 -0.11 -0.06 -0.15 -0.1 -0.06 0 0.09 -0.12 -0.06 -0.16 -0.09 -0.15 -0.12 -0.06 0 -0.24 0.07 -0.05 -0.08 -0.1 0.05 0 -0.17 At5g64370 247275_at
PYD3 encodes a beta-ureidopropionase which, when expressed in E. coli, has been shown to convert beta-ureidopropionate into beta-alanine. 9 beta-ureidopropionase activity

Nucleotide Metabolism | Pyrimidine metabolism | beta-Alanine metabolism | Pantothenate and CoA biosynthesis



0.86 2.03
At4g16330 0.527
oxidoreductase, 2OG-Fe(II) oxygenase family protein, similar to flavonone-3-hydroxylase (naringenin,2-oxoglutarate 3-dioxygenase) from Malus domestica and Pyrus communis 0.05 0.04 -0.02 0.22 -0.26 -0.05 0.13 -0.47 -0.16 0.21 -0.23 -0.02 -0.04 -0.37 0 -0.17 -0.38 -0.05 0.04 -0.03 0.04 0.16 -0.27 0.03 0 -0.23 -0.22 -0.76 -0.23 -0.22 -0.76 -0.2 -0.14 -0.17 -0.18 -0.1 -0.15 -0.47 0.18 0.05 0.15 0.3 0.17 0.1 0.24 0.09 0.21 0.22 0.25 0.09 0.19 0.1 0.04 0.24 0.21 0.16 -0.04 0.15 0.09 0.07 0.15 0.02 -0.55 0.31 0.18 0.34 -0.02 -0.1 0.31 0.34 0.13 0 0.1 0.16 -0.15 -0.04 0.19 0.27 -0.14 -0.09 0.11 0.31 -0.33 -0.01 0.16 -0.04 -0.14 0.04 0.12 0.04 0.33 0.12 0.01 0.1 0.06 0.02 0.04 -0.07 -0.1 0.02 0.09 0.02 0.07 -0.15 -0.05 At4g16330 245360_at
oxidoreductase, 2OG-Fe(II) oxygenase family protein, similar to flavonone-3-hydroxylase (naringenin,2-oxoglutarate 3-dioxygenase) from Malus domestica and Pyrus communis 2
biosynthesis of secondary products derived from L-phenylalanine and L-tyrosine | biosynthesis of phenylpropanoids flavonoid biosynthesis




0.68 1.10
At4g33670 0.525
L-galactose dehydrogenase (L-GalDH) 0.19 0.05 0.05 0.19 0.04 0.13 -0.01 -0.21 0.14 0.07 -0.08 0.08 0.22 -0.01 -0.01 0.11 -0.11 0.11 0.13 0.1 0.13 -0.03 -0.44 0 0.19 -0.21 -0.52 -0.74 -0.21 -0.52 -0.74 0.03 0.05 0.02 -0.03 -0.04 0.27 -0.16 -0.12 0.2 -0.11 0.14 -0.12 0.02 -0.03 0.17 0.06 0.28 0.2 0.17 -0.11 0.17 -0.03 0.1 -0.14 -0.07 -0.19 -0.04 -0.14 -0.16 -0.04 0.05 -0.79 -0.26 -0.25 -0.21 -0.02 -0.52 0.12 0.09 -0.33 0.05 0.21 0.17 0.03 0.1 0.16 0.22 0.16 0.91 0.16 0.22 0.06 0.09 0.04 -0.01 0.12 0.02 0.14 0.05 0.43 0.04 0.22 -0.07 0.34 -0.02 0.21 -0.15 0.2 -0.1 0.25 -0.22 0.06 0 -0.39 At4g33670 253307_at
L-galactose dehydrogenase (L-GalDH) 8



Cell Wall Carbohydrate Metabolism | ascorbic acid biosynthesis


0.75 1.70
At4g30690 0.522
translation initiation factor 3 (IF-3) family protein -0.11 0.06 0.04 0.06 -0.01 0.15 -0.03 -0.4 0.25 0.06 -0.12 0.02 0.15 -0.01 -0.14 -0.01 -0.24 0.03 0.06 0.06 0.02 0.01 0.01 -0.15 0.03 -0.35 -0.33 -1.03 -0.35 -0.33 -1.03 -0.17 0.46 -0.12 -0.28 -0.28 -0.09 -0.3 0.07 0.49 -0.02 0.83 -0.03 0.51 0.25 0.44 -0.05 0.56 0.28 0.43 -0.03 0.75 -0.32 -0.08 -0.23 -0.15 -0.21 -0.19 -0.13 -0.15 -0.24 -0.24 -0.3 0.87 0.38 0.85 -0.36 -0.3 -0.01 0.03 -1.24 -0.21 0.1 0.44 -0.11 0.09 0.13 0.14 0.52 0.49 0.12 0.02 -0.09 0.16 -0.12 -0.05 -0.09 -0.05 0.07 0.15 0.53 0.24 -0.24 0.25 0.28 0.28 0.11 0.05 -0.17 -0.14 0.27 -0.11 -0.1 0.06 -1.04 At4g30690 253597_at
translation initiation factor 3 (IF-3) family protein 4


Translation factors Translation (chloroplast)


0.89 2.11
At3g21370 0.521
glycosyl hydrolase family 1 protein; similar to beta-glucosidase (Brassica napus, Arabidopsis thaliana) 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 1.02 1.84 -0.09 -2.37 -4 -0.09 -2.37 -4 0.16 0.16 0.16 0.16 0.16 0.16 -0.26 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 -1.72 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.16 0.35 -0.28 0.18 0.3 0.16 -0.2 0.11 -0.37 0.12 -0.19 0.34 -0.33 -0.18 -0.73 0.16 0.16 At3g21370 256814_at
glycosyl hydrolase family 1 protein; similar to beta-glucosidase (Brassica napus, Arabidopsis thaliana) 1






Glycoside Hydrolase, Family 1 0.84 5.84
At2g42490 0.520
copper amine oxidase, putative, similar to copper methylamine oxidasefrom Arthrobacter sp. 0.06 0.11 -0.06 0.01 -0.23 0.05 -0.05 -0.15 0.04 0.13 0.01 -0.03 0.02 -0.17 0.01 0 0.06 0.02 0.01 0.14 0.06 0.2 0.06 0.28 0.35 -0.48 -0.92 -1.12 -0.48 -0.92 -1.12 0.15 0.31 -0.15 -0.06 -0.01 0.02 0.11 0.1 0.12 0.18 0.08 0.09 -0.01 0.28 0.14 0.22 0.08 0.14 -0.12 0.15 0.13 0.16 0.15 0.09 0.28 0.11 0.19 0.07 0.05 -0.05 0.21 -0.73 0.25 0.35 0.15 -0.16 0.11 0.09 0.01 -0.05 -0.01 0.14 0.25 -0.07 0.18 0.35 0.05 0.31 0.28 0.12 -0.25 -0.14 0.17 0.06 0.21 0.16 0.21 0.17 -0.02 -0.8 0.19 0.18 0.01 -0.63 0.12 -0.28 0.05 0.11 0.13 -0.42 0.07 -0.01 -0.17 0.1 At2g42490 265882_at
copper amine oxidase, putative, similar to copper methylamine oxidasefrom Arthrobacter sp. 2


Glycine, serine and threonine metabolism | Arginine and proline metabolism | Histidine metabolism | Tyrosine metabolism | Phenylalanine metabolism | Tryptophan metabolism | beta-Alanine metabolism | Alkaloid biosynthesis II



1.00 1.47
At4g04320 0.519
contains weak similarity to Malonyl-CoA decarboxylase (Homo sapiens) 0.01 -0.08 0.03 0.2 0.59 0.05 0.02 0.15 0.07 -0.01 -0.1 -0.07 -0.07 0.28 -0.02 -0.18 0.08 -0.42 -0.02 0.17 0.05 -0.1 0 0.34 0.18 -0.24 -0.57 -1.03 -0.24 -0.57 -1.03 -0.21 -0.33 -0.09 -0.12 0.07 -0.02 -0.16 0.4 -0.22 0.15 0.05 0.11 -0.02 0.18 -0.55 0.33 -0.3 0.48 -0.41 0.02 -0.19 0.07 0.02 0.96 -0.04 0.87 -0.15 0.3 -0.76 0.65 0.55 -0.23 0.38 0.76 0.31 0.07 -0.1 0.41 0.49 -0.24 -0.09 0.21 0.06 -0.49 0.34 0.09 0.42 0.08 0.16 -0.02 -0.22 -0.25 -0.1 -0.32 0.02 0.08 0.02 0.01 0.04 -0.27 0.03 -0.19 0.14 -0.23 0.18 -0.26 0.27 0.05 -0.12 -0.27 0.14 -0.05 -0.39 0.02 At4g04320 255327_at
contains weak similarity to Malonyl-CoA decarboxylase (Homo sapiens) 2
lipid, fatty acid and isoprenoid biosynthesis
Propanoate metabolism | beta-Alanine metabolism
Miscellaneous acyl lipid metabolism

1.08 1.98
At4g18710 0.519 BIN2 ATSK (shaggy-like kinase) family member that encodes an AtSK protein involved in the cross-talk between auxin and brassinosteroid signaling pathways. BR-INSENSITIVE 2 mutant indicated that the BR-insensitive dwarf phenotype was due to a semidominant mutat 0.11 0.06 0.12 0.16 -0.22 0.1 0.06 -0.19 -0.15 0.35 -0.08 0.02 -0.13 -0.53 -0.24 -0.36 -0.42 -0.16 0.09 -0.12 -0.23 0.04 0.09 0.15 0.16 -0.23 -0.72 -0.51 -0.23 -0.72 -0.51 -0.07 0.37 -0.08 -0.19 -0.06 -0.16 -0.36 -0.15 0.4 -0.03 0.49 -0.15 0.25 -0.18 0.22 0.14 0.43 0.12 0.23 -0.28 0.41 -0.27 0.02 0.38 0.19 -0.11 -0.11 -0.19 -0.11 -0.05 -0.05 -0.26 0.38 0.04 0.26 0.15 -0.41 -0.01 0.42 -0.46 0.56 -0.07 0.18 -0.01 -0.11 0.09 0.23 0.28 0.12 0.41 0.11 0.13 0.02 0.02 0.21 0.05 0.05 0.16 0.25 0.2 0.14 -0.09 0.02 0.08 0.18 0.05 0.06 -0.04 0 0.18 0.08 0.06 0.14 -0.65 At4g18710 254616_at BIN2 ATSK (shaggy-like kinase) family member that encodes an AtSK protein involved in the cross-talk between auxin and brassinosteroid signaling pathways. BR-INSENSITIVE 2 mutant indicated that the BR-insensitive dwarf phenotype was due to a semidominant mutat 7 multidimensional cell growth | response to auxin stimulus | detection of brassinosteroid stimulus | brassinosteroid mediated signaling | leaf morphogenesis | protein amino acid phosphorylation | protein kinase activity intracellular signalling
Inositol phosphate metabolism | Nicotinate and nicotinamide metabolism | Benzoate degradation via CoA ligation



0.90 1.27
At1g65260 0.513
PspA/IM30 family protein; similar to Membrane-associated 30 kDa protein (Pisum sativum); similar to phage shock protein A (Vibrio parahaemolyti) -0.01 0.04 0.06 0.02 -0.09 0.04 -0.07 -0.01 0.06 -0.05 0.01 0.06 0.01 0.14 -0.03 -0.25 0.01 -0.01 -0.23 0.22 -0.27 -0.33 0.03 0.09 0.13 -0.35 -0.3 -0.49 -0.35 -0.3 -0.49 -0.03 0.06 -0.38 -0.11 -0.1 0.06 -0.28 0 0.18 0.14 0.32 0.03 0.31 0.19 0.15 -0.02 0.36 0.04 0.05 -0.03 0.17 0.09 0.17 -0.03 0.05 0.1 0.21 0.08 0.1 0.07 0.08 -0.6 0.22 0.07 0.37 -0.1 -0.28 -0.14 -0.04 -0.56 0.13 -0.17 0 0.06 -0.02 -0.17 0.06 -0.1 0.07 0.38 0.1 0.19 0.08 -0.04 0.12 -0.01 0.09 -0.09 0.07 0.05 0.01 0.36 0.07 -0.01 0.2 0.17 -0.12 0.28 -0.06 0.09 -0.04 -0.02 0.16 -0.12 At1g65260 264158_at
PspA/IM30 family protein; similar to Membrane-associated 30 kDa protein (Pisum sativum); similar to phage shock protein A (Vibrio parahaemolyti) 8



Thylakoid biogenesis and photosystem assembly


0.66 0.98
At5g10860 0.511
CBS domain-containing protein 0.28 0 -0.04 0.05 0 0.09 -0.01 -0.44 -0.04 0.09 -0.17 0 0.07 0.19 -0.01 -0.27 -0.53 0 -0.04 0.06 -0.05 0 -0.2 -0.03 -0.07 -0.18 -0.28 -0.71 -0.18 -0.28 -0.71 -0.04 -0.02 -0.31 -0.14 -0.09 -0.08 -0.36 0.01 0.68 0.13 0.76 0.17 0.5 0.2 0.56 0.24 0.49 0.28 0.31 0.01 0.37 -0.13 0.07 -0.08 0.05 -0.17 -0.15 -0.06 -0.06 0.04 -0.04 -0.76 0.24 0.02 0.32 -0.05 -0.33 0.1 0.21 0.13 0.47 -0.23 0.16 0.07 -0.06 0 0.39 -0.07 0.18 0.2 0.33 0.32 -0.08 -0.15 0.05 -0.16 -0.02 0.12 -0.05 0.19 -0.09 -0.08 -0.11 0.06 -0.09 0.16 0.03 -0.04 0.01 -0.04 -0.1 -0.39 -0.04 -0.56 At5g10860 250409_at
CBS domain-containing protein 2

isoleucine biosynthesis I | valine biosynthesis




0.89 1.52
At5g59440 0.508
thymidylate kinase family protein 0.12 0 0.1 -0.2 0.23 0.13 0.01 0.2 0.05 0.11 0.08 0.02 -0.01 -0.36 0.12 -0.22 0.05 0.19 0.01 0.06 -0.1 -0.28 -0.1 0.03 -0.04 -0.26 -0.49 -0.77 -0.26 -0.49 -0.77 -0.27 -0.2 -0.09 -0.12 0.01 -0.03 -0.34 0.13 0.27 0.01 0.3 0.07 0.24 0.11 0.31 0.27 0.18 -0.09 0.08 0.04 -0.01 -0.28 -0.03 0.36 0.23 0.08 -0.03 -0.08 -0.07 -0.16 -0.2 -0.49 0.22 0.33 0.39 -0.42 -0.22 0.25 0.27 0.23 -0.04 0.13 0.2 -0.22 0.06 -0.12 0.13 0.27 0.24 -0.24 0.06 -0.18 -0.18 -0.17 0.13 -0.27 -0.02 0.04 -0.01 0.5 -0.16 0.15 -0.05 0.34 -0.17 0.24 -0.1 0.05 0.01 0.33 -0.07 0.38 0.14 0.21 At5g59440 247735_at
thymidylate kinase family protein 2
intracellular signalling de novo biosynthesis of pyrimidine deoxyribonucleotides Nucleotide Metabolism | Pyrimidine metabolism



0.74 1.28
At1g22620 0.507
contains similarity to phosphoinositide phosphatase SAC1 (Rattus norvegicus) 0.01 0.02 -0.09 0.16 0.16 -0.02 0.23 0.1 -0.1 0.13 -0.02 -0.12 0.16 0.02 -0.11 0.28 0.04 -0.12 0.07 0.07 -0.09 0.43 0.01 0.25 0.18 0.11 -0.37 -0.68 0.11 -0.37 -0.68 -0.01 0.12 -0.18 0.01 -0.1 -0.03 0.09 -0.13 0.22 0.07 0.35 -0.02 0.11 -0.02 0.18 -0.02 0.35 -0.02 0.53 -0.02 0.18 -0.02 -0.02 -0.02 -0.02 -0.02 -0.02 -0.02 -0.02 0.05 0.16 -0.02 -0.13 -0.02 -0.02 0.09 -0.4 0.17 0.21 -0.09 -0.34 -0.02 -0.24 -0.25 0.05 0.16 0.23 0.02 0.02 0.02 0.02 0.34 0.02 0.02 0.02 0 0.02 0.02 -0.14 0.07 0.1 -0.05 -0.12 -0.15 0.08 -0.03 -0.23 0.02 0.01 -0.04 -0.3 -0.33 0.06 -0.37 At1g22620 264197_at
contains similarity to phosphoinositide phosphatase SAC1 (Rattus norvegicus) 2




Lipid signaling

0.64 1.21
At3g56350 0.507
similar to manganese superoxide dismutase (MSD1) (Arabidopsis thaliana) 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.65 1.5 -0.41 -0.87 -1.98 -0.41 -0.87 -1.98 0.06 0.06 0.06 0.06 0.06 0.06 -0.35 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 -1.28 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 0.06 At3g56350 251731_at
similar to manganese superoxide dismutase (MSD1) (Arabidopsis thaliana) 4 removal of superoxide radicalsI detoxification | detoxification by modification removal of superoxide radicals




0.47 3.48
At5g40760 0.507
Encodes a cytosolic glucose-6-phosphate dehydrogenase that is insensitive to reduction by DTT and whose mRNA is expressed ubiquitously. 0.12 0.01 0.1 0.31 0.03 0.03 -0.09 -0.31 0.01 -0.13 -0.24 0.01 -0.11 0.23 -0.24 -0.16 0.16 -0.32 -0.16 -0.04 -0.16 -0.27 -0.44 -0.17 0.36 -0.31 -0.64 -1.33 -0.31 -0.64 -1.33 -0.33 -0.26 -0.09 0.2 0.12 0.14 -0.3 0.37 0.07 0.22 0.38 0.12 0.32 -0.02 -0.01 0.05 0.15 -0.1 0.2 0.38 -0.07 0.22 -0.3 1.14 -0.22 0.53 0.25 0.49 -0.09 0.2 0.15 -0.57 0.42 0.55 0.25 -0.12 0.44 0.11 -0.04 0.69 0.23 -0.07 0.03 0.15 0.08 0.02 -0.22 0.28 -0.22 0.37 0.28 0.41 0.14 0.01 0.12 0.11 0.2 0.02 -0.06 -0.17 -0.02 -0.16 -0.07 -0.43 0.05 -0.25 0.07 -0.05 -0.1 -0.13 -0.07 -0.14 -0.05 0 At5g40760 249372_at
Encodes a cytosolic glucose-6-phosphate dehydrogenase that is insensitive to reduction by DTT and whose mRNA is expressed ubiquitously. 10 glucose-6-phosphate 1-dehydrogenase activity | glucose metabolism | pentose-phosphate shunt, oxidative branch C-compound and carbohydrate utilization | pentose-phosphate pathway oxidative branch of the pentose phosphate pathway Pentose phosphate pathway | Glutathione metabolism Intermediary Carbon Metabolism


0.87 2.49
At4g35790 0.506 ATPLDDELTA Encodes a protein with phospholipase D activity. Involved in phospolipase metabilism. Mutants are affected in hydrgen peroxide mediated cell death. 0.03 0 -0.05 -0.01 0.13 0.03 -0.17 -0.06 -0.06 0.01 -0.02 0.06 0.32 1.79 -0.11 -0.15 -0.28 0.09 -0.08 0.08 0.08 -0.02 -0.25 0.06 0.24 -0.54 -0.34 -0.75 -0.54 -0.34 -0.75 -0.06 0 0.07 0.12 0.15 -0.1 -0.61 0.2 -0.11 0.25 -0.06 0.14 -0.07 0.26 0.05 0.4 0.09 0.55 0.11 0.04 0.01 0.25 0.52 0.16 0.48 0.39 0.08 0.28 0.08 0.1 0.16 -0.81 0.07 0.12 0.11 0.01 -0.54 0.06 0.07 -0.31 0.22 0.01 0.01 -0.01 0.18 0.11 0.17 -0.01 -0.06 -0.08 -0.13 -0.08 -0.06 0.08 -0.24 -0.05 0.14 0.1 0.04 0.23 0 -0.13 -0.1 0.16 0 0.14 0.04 -0.1 0.04 0.11 0.09 -0.06 -0.53 -1.34 At4g35790 253120_at ATPLDDELTA Encodes a protein with phospholipase D activity. Involved in phospolipase metabilism. Mutants are affected in hydrgen peroxide mediated cell death. 10 phospholipase D activity | programmed cell death | microtubule cytoskeleton stress response lipases pathway

Lipid signaling

0.92 3.12
At5g23050 0.506 AAE17 acyl-activating enzyme 17 (AAE17) -0.07 -0.07 -0.3 -0.5 -0.39 0.22 -0.26 -0.14 -0.16 -0.03 -0.44 -0.28 0.15 0.53 -0.36 -0.74 -0.43 -0.45 -0.28 -0.19 -0.1 0.04 -0.32 0.18 0.84 -0.28 -0.08 -1 -0.28 -0.08 -1 -0.27 0.32 0.43 -0.36 -0.04 -0.75 -0.88 -0.05 0.24 0.53 0.49 0.21 0.24 -0.03 0.3 0.11 0.19 0.12 0.14 0.19 0.28 0.17 -0.12 0.22 -0.18 -0.19 -0.07 -0.49 0.38 -0.05 0.06 -1.45 0.34 0.42 0.38 -0.24 -0.62 0.56 0.74 -1.23 0.03 0.3 0.78 0.95 1.13 1.45 0.99 0.41 1.07 1.13 -0.07 -0.07 -0.07 -0.07 -0.07 -0.1 -0.07 -0.07 -0.18 0.9 0.01 -0.19 -0.08 0.09 0.05 0.04 -0.25 -0.43 -0.06 0.1 -0.08 -0.19 -0.76 -0.36 At5g23050 249869_at AAE17 acyl-activating enzyme 17 (AAE17) 2



Intermediary Carbon Metabolism Miscellaneous acyl lipid metabolism
Acyl activating enzymes , CoA ligases, clade II 1.69 2.90
At1g20620 0.504 CAT3 Catalase 3 (SEN2). Catalase, catalyzes the breakdown of hydrogen peroxide (H2O2) into water and oxygen. -0.13 0.03 0.05 0.19 0.06 0.19 0.14 -0.06 0.1 -0.05 -0.18 0.06 -0.13 -0.24 -0.1 -0.27 0.03 -0.11 -0.28 -0.33 -0.23 -0.39 -0.24 0.16 0.26 0.03 -0.46 -0.98 0.03 -0.46 -0.98 0.03 0.15 -0.28 0.33 0.18 0.06 -0.31 0.02 0.12 0.09 0.39 0.01 0.05 0.03 -0.03 -0.03 0.18 0.38 0.15 0.06 0.06 0.38 0.41 0.04 -0.01 0.04 0.11 0.06 0.28 0.15 0.01 -0.15 0.15 0 0.28 -0.39 -0.17 -0.16 -0.03 -0.22 1.03 -0.27 0.31 -0.2 -0.28 0.08 -0.09 -0.09 0.52 0.21 0.43 0.28 0.23 0.13 0.01 -0.11 0.08 -0.01 0.03 0.06 -0.06 -0.08 -0.11 0.13 -0.02 0.12 0.19 -0.12 0.07 -0.02 0.08 -0.23 -0.03 -0.35 At1g20620 259544_at CAT3 Catalase 3 (SEN2). Catalase, catalyzes the breakdown of hydrogen peroxide (H2O2) into water and oxygen. 4 hydrogen peroxide catabolism

Methane metabolism | Tryptophan metabolism



0.76 2.01
At1g21640 0.503 NADK2 ATP:NAD 2'-phosphotransferase -0.1 0.05 -0.01 -0.25 0.08 0.06 -0.07 -0.09 -0.18 -0.04 0.15 -0.07 -0.13 -0.02 -0.13 -0.12 0.11 -0.28 -0.27 -0.03 -0.4 -0.26 -0.08 0.42 0.2 0.22 -0.01 -0.49 0.22 -0.01 -0.49 0.16 0.1 -0.02 -0.32 -0.23 -0.07 -0.47 0.28 0.17 0.25 0.42 0.2 0.36 0.24 0.28 0.15 -0.01 0.21 0.21 0.34 0.33 -0.03 0.23 0.24 0.28 -0.11 0.1 0.36 -0.07 0.21 0 -0.66 0.36 0.34 0.45 0.05 0.18 0.44 0.45 -0.76 0.55 0.03 0.11 0.35 0.12 0.06 0.27 -0.17 -0.67 0.23 -0.18 -0.09 -0.1 -0.15 0.09 -0.23 0.35 -0.16 -0.32 -0.6 -0.48 0.24 -0.28 0.01 -0.31 -0.24 -0.05 0.07 -0.55 -0.04 -0.42 -0.06 -0.06 0.01 At1g21640 262506_at NADK2 ATP:NAD 2'-phosphotransferase 6

NAD phosphorylation and dephosphorylation




0.90 1.30
At4g21960 0.501 PRXR1 peroxidase 42 (PER42) (P42) (PRXR1) -0.07 0.07 0.18 0.16 -0.06 0.21 -0.11 -0.2 0.2 -0.04 -0.09 0.07 -0.09 0 0.1 -0.15 0.08 0.02 -0.12 -0.17 -0.04 -0.26 -0.49 0.09 -0.06 -0.09 -0.52 -0.83 -0.09 -0.52 -0.83 0.09 0.06 -0.31 0.23 0.14 -0.01 -0.39 0.23 0.12 0.38 0.24 0.33 0.06 0.2 0.11 0.21 0.12 0.57 0.07 0.2 0.05 0.37 0.33 -0.1 0.28 0.12 0.26 0.27 0.28 0.11 0.4 -0.96 0.4 0.18 0.56 -0.36 0.7 -0.45 -0.34 -0.47 0.19 -0.28 0.15 0.16 -0.42 0.05 -0.62 -0.57 0.42 0.22 0.43 0.13 0.1 0.06 0.17 0.02 0.05 0 -0.01 0.03 -0.03 0 -0.08 0.1 0.02 0.15 0.09 0.05 -0.07 0.08 -0.06 -0.36 -0.02 -0.84 At4g21960 254386_at PRXR1 peroxidase 42 (PER42) (P42) (PRXR1) 2


Methane metabolism | Prostaglandin and leukotriene metabolism | Phenylalanine metabolism | Stilbene, coumarine and lignin biosynthesis



0.97 1.67




























































































































page created by Juergen Ehlting 04/24/06