whole web CYPedia


quick links to pathway maps:

last updated: 20/07/06

CYPedia - Cytochrome P450 Expression Database using Arabidopsis_____



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List of all P450s in Arabidopsis

including pathway scoring results, information on known functions, links out, and information on the probesets used for co-expression analysis

Name

Top Scoring Co-Expressed Pathways [?]

Score

Description / Known Pathway

Links [?]

AGI locus

Probeset

Cross hybridization with

CYP51G1 (CYP51A2)

Sterol biosynthesis (BioPath); all pathways

200

obtusifoliol 14α-demethylase; sterol / steroid metabolism (Kushiro et al., 2001, Kim et al., 2005)

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g11680

264877_at

-

CYP51G2 (CYP51A1)

no probeset for this gene

-

cytochrome P450 family protein (expressed pseudogene) (Kim et al., 2005)

PLaCe / MIPS / Tair / Tigr / SIGnAL

At2g17330

-

-

Name

Top Scoring Co-Expressed Pathway [?]

Score

Description / Known Pathway

Links [?]

AGI locus

Probeset

Cross hybridization with

CYP71A12

Tryptophan biosynthesis (TAIR-GO ); all pathways

334

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At2g30750

267565_at

-

CYP71A13

Phenylpropanoid Metabolism (BioPath) in stress data set; all pathways

117

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At2g30770

267567_at

At2g30750

CYP71A14

no probeset for this gene

-

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL

At5g24960

-

-

CYP71A15

Abscisic acid biosynthesis (TAIR-GO); all pathways

36

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At5g24950

246972_s_at

-

CYP71A16

Triterpene, sterol, and brassinosteroid metabolism (LitPath); all pathways

80

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At5g42590

249203_at

-

CYP71A17P

no probeset for this gene

-

cytochrome P450 family protein (pseudogene)

PLaCe

-

-

-

CYP71A18

Lipid signaling (AcylLipid) in organ data set; all pathways

52

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g11610

262815_at

-

CYP71A19

Mono-/sesqui-/di-terpene biosynthesis (LitPath) in organ data set; all pathways

29

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At4g13290

254767_s_at

-

CYP71A20

no probeset for this gene

-

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL

At4g13310

-

-

CYP71A21

no probeset for this gene

-

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL

At3g48320

-

-

CYP71A22

no probeset for this gene

-

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL

At3g48310

-

-

CYP71A23

no probeset for this gene

-

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL

At3g48290

-

-

CYP71A24

no probeset for this gene

-

cytochrome P450 family protein

PLace / MIPS / Tair / Tigr / SIGnAL

At3g48290

-

-

CYP71A25

no probeset for this gene

-

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL

At3g48280

-

-

CYP71A26

no probeset for this gene

-

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL

At3g48270

-

-

CYP71A27P

no probeset for this gene

-

cytochrome P450 family protein (pseudogene)

PLaCe

-

-

-

CYP71A28

Cell Wall Carbohydrate Metabolism (BioPath) in organ data set; all pathways

8

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At4g20240

254513_at

At4g22710

CYP71B2

Biosynthesis of Amino Acids and Derivatives (BioPath) in hormone data set; all pathways

50

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g13080

262779_at

-

CYP71B3

Glutathione metabolism (BioPath); all pathways

24

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g26220

257624_at

At3g26230

CYP71B4

C-compound and carbohydrate metabolism (FunCat); all pathways

69

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g26280

257635_at

-

CYP71B5

Phenylpropanoid Metabolism (BioPath) in organ data set; all pathways

21

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g53280

251987_at

-

CYP71B6

Tryptophan biosynthesis (TAIR-GO); all pathways

372

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At2g24180

266000_at

-

CYP71B7

Glucosinolate Metabolism (LitPath) in organ data set; all pathways

130

cytochrome P450 family protein, 7-ethoxycoumarin deethylase (?). (Maughan et al., 1997)

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g13110

262793_at

-

CYP71B8

Mono-/sesqui-/di-terpene biosynthesis (LitPath); all pathways

98

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At5g35715

251988_at

At3g53300

CYP71B9

abscisic acid biosynthesis (TAIR-GO) in organ data set; all pathways

12

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At2g02580

267267_at

-

CYP71B10

Synthesis and storage of oil (AcylLipid); all pathways

74

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At5g57260

247953_at

-

CYP71B11

Sterol biosynthesis (BioPath); all pathways

24

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At5g25120

246947_at

-

CYP71B12

Biosynthesis of prenyl diphosphates (BioPath) in hormone data set; all pathways

10

cytochrome P450 family protein

PLaCE / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At5g25130

246949_at

At5g25130

CYP71B13

Biosynthesis of prenyl diphosphates (BioPath) in hormone data set; all pathways

10

cytochrome P450 family protein

PlaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At5g25140

246949_at

At5g25140

CYP71B14

Secondary metabolism (TAIR-GO); all pathways

48

cytochrome P450 family protein

PlaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At5g25180

246925_at

At5g25130; At5g25140; At5g25170

CYP71B15, PAD3

Tryptophan biosynthesis (TAIR-GO); all pathways

470

cytochrome P450 involved in camalexin biosynthesis (Zhou et al., 1999); camalexin is derived from tryptophan, but exact substrate not identified

PlaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g26830

258277_at

-

CYP71B16

Transport (FunCat); all pathways

186

cytochrome P450 family protein

PlaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g26150

257630_at

-

CYP71B17

Starch and sucrose metabolism (KEGG); all pathways

94

cytochrome P450 family protein

PlaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g26160

257631_at

At3g26150

CYP71B18

no probeset for this gene

-

cytochrome P450 family protein

PlaCe

-

-

-

CYP71B19

Photosystems (BioPath); all pathways

372

cytochrome P450 family protein

PlaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g26170

257634_s_at

At3g26180

CYP71B20

Photosystems (BioPath); all pathways

372

cytochrome P450 family protein

PlaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g26180

257634_s_at

At3g26170

CYP71B21

there are no co-expressed pathways for this gene, view heatmaps

-

cytochrome P450 family protein

PlaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g26190

257632_at

-

CYP71B22

Phenylpropanoid Metabolism (BioPath) in mutant data set; all pathways

40

cytochrome P450 family protein

PlaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g26200

257636_at

-

CYP71B23

Glutathione metabolism (BioPath); all pathways

260

cytochrome P450 family protein

PlaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g26210

257623_at

-

CYP71B24

Glutathione metabolism (BioPath); all pathways

85

cytochrome P450 family protein

PlaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g26230

257624_at

At3g26220

CYP71B25

there are no co-expressed pathways in any data set, view heatmaps

-

cytochrome P450 family protein

PlaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g26270

257627_at

At1g69500

CYP71B26

Tryptophan metabolism (KEGG); all pathways

69

cytochrome P450 family protein

PlaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g26290

257628_at

-

CYP71B27

no probeset for this gene

-

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL

At1g13070

-

-

CYP71B28

Chlorophyll biosynthesis (AraCyc); all pathways

74

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g13090

262780_at

-

CYP71B29

Phenylpropanoid Metabolism (BioPath); all pathways

52

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g13100

262827_at

-

CYP71B30P

not expressed to detectable level in any sample; details

-

cytochrome P450 family protein (pseudogene)

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g53290

251978_at

-

CYP71B31

Mono-/sesqui-/di-terpene biosynthesis (LitPath); all pathways

98

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g53300

251988_at

At5g35715

CYP71B32

no probeset for this gene

-

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL

At3g53305

-

-

CYP71B33

no probeset for this gene

-

cytochrome P450 family protein

PLaCe

-

-

-

CYP71B34

Plastidial Isoprenoids (BioPath); all pathways

360

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g26300

256870_at

-

CYP71B35

C-compound and carbohydrate metabolism (FunCat); all pathways

139

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g26310

256873_at

-

CYP71B36

C-compound and carbohydrate metabolism (FunCat); all pathways

65

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g26320

256874_at

-

CYP71B37

C-compound and carbohydrate metabolism (FunCat) in mutant data set; all pathways

42

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g26330

256875_at

-

CYP71B38

Mono-/sesqui-/di-terpene biosynthesis (LitPath) in hormone data set; all pathways

54

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g44250

252674_at

At3g53280

Name

Top Scoring Co-Expressed Pathway [?]

Score

Description / Known Pathway

Links [?]

AGI locus

Probeset

Cross hybridization with

CYP72A7

Glutamate metabolism (KEGG) in organ data set; all pathways

31

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g14610

258110_at

-

CYP72A8

Glutathione metabolism (KEGG); all pathways

125

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g14620

258063_at

-

CYP72A9

Cell Wall Carbohydrate Metabolism (BioPath) in organ data set; all pathways

24

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g14630

258111_at

-

CYP72A10

there are no co-expressed pathways for this gene; view heatmaps

-

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g14640

258112_at

-

CYP72A11

Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) (BioPath); all pathways

706

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g14650

258113_at

-

CYP72A12P

no probeset for this gene

-

cytochrome P450 family protein (pseudogene)

PLaCe

-

-

-

CYP72A13

Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) (BioPath); all pathways

92

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g14660

258114_at

At3g14650

CYP72A14

Phenylpropanoid Metabolism (BioPath); all pathways

89

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g14680

258064_at

At3g14650; At3g14660

CYP72A15

Carotenoid biosynthesis (AraCyc); all pathways

94

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g14690

258094_at

-

CYP72C1, SHK1, SOB7, CHI2

C-compound and carbohydrate metabolism (FunCat) in organ data set; all pathways

15

controls brassinosteroid (BR) homeostasis by modulating BR concentration, brassinosteroid degradation (Takahashi et al., 2005; Turk et al., 2005; Nakamura et al., 2005)

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g17060

262525_at

-

Name

Top Scoring Co-Expressed Pathway [?]

Score

Description / Known Pathway

Links [?]

AGI locus

Probeset

Cross hybridization with

CYP73A5, C4H

Lignin biosynthesis (AraCyc); Details

520

cinnamic acid 4-hydroxylase; phenylpropanoid metabolism, lignin biosynthesis (Urban et al. 1994, Mizutani et al. 1997)

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At2g30490

267470_at

-

Name

Top Scoring Co-Expressed Pathway [?]

Score

Description / Known Pathway

Links [?]

AGI locus

Probeset

Cross hybridization with

CYP74A, AOS

Jasmonic acid biosynthesis (TAIR-GO); all pathways

257

allene oxide synthase; oxylipin pathway, jasmonate biosynthesis (Laudert et al. 1996, Laudert et al. 2000, Park et al. 2002)

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At5g42650

249208_at

-

CYP74B2, HPL1

Lipoxygenase pathway (AraCyc); all pathways

80

hydroperoxide lyase; oxylipin pathway, jasmonate biosynthesis (Bate et al. 1998; Duan et al. 2005)

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At4g15440

245253_at

-

Name

Top Scoring Co-Expressed Pathway [?]

Score

Description / Known Pathway

Links [?]

AGI locus

Probeset

Cross hybridization with

CYP75B1, F3'H

Flavonoid biosynthesis (TAIR-GO); all pathways

180

flavonoid 3’-hydroxylase; flavonoid biosynthesis (Schoenbohm et al., 2000)

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At5g07990

250558_at

-

Name

Top Scoring Co-Expressed Pathway [?]

Score

Description / Known Pathway

Links [?]

AGI locus

Probeset

Cross hybridization with

CYP76C1

C-compound and carbohydrate metabolism (FunCat); all pathways

52

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At2g45560

267505_at

-

CYP76C2

Intermediary Carbon Metabolism (BioPath), all pathways

72

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At2g45570

267559_at

-

CYP76C3

Monoterpene biosynthesis (LitPath), all pathways

50

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At2g45580

267560_at

-

CYP76C4

Mono-/sesqui-/di-terpene biosynthesis (LitPath); all pathways

12

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At2g45550

267502_at

-

CYP76C5

Systemic acquired resistance (TAIR-GO); all pathways

14

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g33730

261986_s_at

At1g33720

CYP76C6

Systemic acquired resistance (TAIR-GO); all pathways

14

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g33720

261986_s_at

At1g33730

CYP76C7

Synthesis and storage of oil (AcylLipid) in organ data set; all pathways

38

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g61040

251350_at

-

CYP76C8P

There is no probeset for this gene

-

cytochrome P450 family protein (pseudogene)

PLaCe / MIPS / Tair / Tigr / SIGnAL

At3g61035

-

-

CYP76G1

Cell Wall Carbohydrate Metabolism (BioPath) in mutant data set; all pathways

229

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g52970

252017_at

-

Name

Top Scoring Co-Expressed Pathway [?]

Score

Description / Known Pathway

Links [?]

AGI locus

Probeset

Cross hybridization with

CYP77A4

Leaf Glycerolipid Biosynthesis (BioPath) in organ data set; all pathways

20

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At5g04660

250859_at

-

CYP77A5P

no probeset for this gene

-

cytochrome P450 family protein (pseudogene)

PLaCe

-

-

-

CYP77A6

Miscellaneous acyl lipid metabolism (AcylLipid) in organ data set; all pathways

64

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g10570

258962_at

-

CYP77A7

Cell Wall Carbohydrate Metabolism (BioPath) in organ data set; all pathways

12

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g10560

258918_at

-

CYP77A8P

no probeset for this gene

-

cytochrome P450 family protein (pseudogene)

PLaCe

-

-

-

CYP77A9

this gene is basically not expressed to detectable levels; details

-

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At5g04630

250838_at

-

CYP77B1

Miscellaneous acyl lipid metabolism (AcylLipid) in organ data set; all pathways

26

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g11600

262819_at

-

Name

Top Scoring Co-Expressed Pathway [?]

Score

Description / Known Pathway

Links [?]

AGI locus

Probeset

Cross hybridization with

CYP78A5

Secondary metabolism (FunCat) in organ data set; all pathways

13

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g13710

256099_at

-

CYP78A6

There are no co-expressed pathways, see heatmaps

-

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At2g46660

266321_at

-

CYP78A7

Synthesis and storage of oil (AcylLipid) in organ data set, all pathways

38

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At5g09970

250509_at

-

CYP78A8

Mono-/sesqui-/di-terpene biosynthesis (LitPath) in organ data set; all pathways

18

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g01190

261574_at

-

CYP78A9

Cell Wall Carbohydrate Metabolism (BioPath) in organ data set; all pathways

18

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g61880

251301_at

-

CYP78A10

Lipid signaling (AcylLipid) in hormone etc. data set; all pathways

48

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g74110

260376_at

-

Name

Top Scoring Co-Expressed Pathway [?]

Score

Description / Known Pathway

Links [?]

AGI locus

Probeset

Cross hybridization with

CYP79A2

not expressed to detectable levels in almost all microarrays; details

-

conversion of phenylalanine to oxime; benzylglucosinolate biosynthesis (Wittstock and Halkier, 2000)

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At5g05260

250783_at

-

CYP79A3P

no probeset for this gene

-

cytochrome P450 family protein (pseudogene)

PLaCe / MIPS / Tair / Tigr / SIGnAL

At5g35917

-

-

CYP79A4P

not expressed to detectable levels in any microarray; details

-

cytochrome P450 family protein (pseudogene)

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At5g35920

249673_at

-

CYP79B2

tryptophan biosynthesis (TAIR-GO); all pathways

692

conversion of tryptophan and tryptophan analogs to oxime; indole glucosinolate biosynthesis (Bak et al., 1998; Hull et al., 2000, Mikkelsen et al., 2000, Mikkelsen et al.,2003); camalexin biosynthesis (Glawischnig et al., 2004); auxin biosynthesis (Zhao et al., 2002, Ljung et al., 2005)

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At4g39950

252827_at

-

CYP79B3

Glucosinolate Metabolism (LitPath); all pathways

310

conversion of tryptophan to oxime; indole glucosinolate biosynthesis (Hull et al., 2000, Mikkelsen et al.,2003); camalexin biosynthesis (Glawischnig et al., 2004); auxin biosynthesis (Zhao et al., 2002, Ljung et al., 2005)

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At2g22330

264052_at

-

CYP79B4P

no probeset for this gene

-

cytochrome P450 family protein (pseudogene)

PLaCe

-

-

-

CYP79C1

there are no co-expressed pathways for this gene; details

-

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g79370

264090_at

-

CYP79C2

no probeset for this gene

-

cytochrome P450 family protein

PLaCE / MIPS / Tair / Tigr / SIGnAL

At1g58260

-

-

CYP79C4P

no probeset for this gene

-

cytochrome P450 family protein (pseudogene)

PLaCe

-

-

-

CYP79C5P

there are no co-expressed pathways for this gene; details

-

cytochrome P450 family protein (pseudogene)

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g58265

256019_at

-

CYP79F1, SPS, BUS1

Glucosinolate Metabolism (LitPath); all pathways

360

conversion of mono to hexahomomethionine; aliphatic glucosinolate biosynthesis (Reintanz et al., 2001, Chen et al., 2003; Tantikanjana et al., 2004)

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g16410

262717_s_at

At1g16400

CYP79F2

Glucosinolate Metabolism (LitPath); all pathways

360

long chain penta and hexahomomethionine in synthesis of long chain aliphatic glucosinolates (Reintanz et al., 2001, Chen et al., 2003; Tantikanjana et al., 2004)

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g16400

262717_s_at

At1g16410

Name

Top Scoring Co-Expressed Pathway [?]

Score

Description / Known Pathway

Links [?]

AGI locus

Probeset

Cross hybridization with

CYP81D1

Phenylpropanoid Metabolism (BioPath) in hormone data set; all pathways

89

cytochrome P450 family protein

PlaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At5g36220

246620_at

-

CYP81D2

Abscisic acid biosynthesis (TAIR-GO); all pathways

84

cytochrome P450 family protein

PlaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At4g37360

253091_at

-

CYP81D3

Terpenoid metabolism (LitPath); all pathways

36

cytochrome P450 family protein

PlaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At4g37340

253098_at

-

CYP81D5

Cell Wall Carbohydrate Metabolism (BioPath) in hormone data set; all pathways

24

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At4g37320

253097_at

-

CYP81D6

Degradation (FunCat); all pathways

420

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At2g23220

245072_s_at

At2g23190

CYP81D7

Degradation (FunCat); all pathways

420

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At2g23190

245072_s_at

At2g23220

CYP81D8

Glutathione metabolism (KEGG); all pathways

102

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At4g37370

253046_at

-

CYP81D10

Biogenesis of cell wall (FunCat) in hormone data set; all pathways

12

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g66540

256386_at

-

CYP81D11

Phenylpropanoid Metabolism (BioPath); all pathways

71

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g28740

256589_at

-

CYP81D40

Plastidial Isoprenoids (BioPath); all pathways

291

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At4g37330

253096_at

-

CYP81F1

Jasmonic acid biosynthesis (AraCyc); all pathways

30

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At4g37430

253101_at

-

CYP81F2

Tryptophan biosynthesis (TAIR-GO); all pathways

342

cytochrome P450 family protein

PlaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At5g57220

247949_at

-

CYP81F3

Phenylpropanoid Metabolism (BioPath) in mutant data set; all pathways

74

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At4g37400

253100_at

-

CYP81F4

Glucosinolate Metabolism (LitPath); all pathways

50

cytochrome P450 family protein

PlaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At4g37410

253073_at

-

CYP81H1

Photosystems (BioPath) in organ data set; all pathways

121

cytochrome P450 family protein

PlaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At4g37310

253052_at

-

CYP81K1

Biosynthesis of Amino Acids and Derivatives (BioPath); all pathways

40

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At5g10610

250423_s_at

-

CYP81K2

no probeset for this gene

-

cytochrome P450 family protein

PlaCe / MIPS / Tair / Tigr / SIGnAL

At5g10600

-

-

Name

Top Scoring Co-Expressed Pathway [?]

Score

Description / Known Pathway

Links [?]

AGI locus

Probeset

Cross hybridization with

CYP82C2

Aromatic amino acid (Phe, Tyr, Trp) metabolism (BioPath); all pathways

10

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At4g31970

253505_at

At4g31940

CYP82C3

Biosynthesis of amino acids and derivatives (BioPath); all pathways

102

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At4g31950

253503_at

At4g31940; At4g31970

CYP82C4

Aromatic amino acid (Phe, Tyr, Trp) metabolism (BioPath); all pathways

10

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At4g31940

253505_at

At4g31970

CYP82F1

Cell Wall Carbohydrate Metabolism (BioPath) in organ data set; all pathways

63

cytochrome P450 family protein

PlaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At2g25160

264404_at

-

CYP82G1

mono-/sesqui-/di-terpene biosynthesis (LitPath); all pathways

72

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g25180

257835_at

-

Name

Top Scoring Co-Expressed Pathway [?]

Score

Description / Known Pathway

Links [?]

AGI locus

Probeset

Cross hybridization with

CYP83A1, REF2

Glucosinolate Metabolism (LitPath); all pathways

330

oxidation of methionine-derived oximes; oxidation of p-hydroxyphenyl-acetaldoxime, indole-3-acetyldoxime; aliphatic glucosinolate biosynthesis; (Hemm et al., 2003; Bak and Feyereisen, 2001; Naur et al., 2003)

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At4g13770

254687_at

-

CYP83B1, SUR2, RNT1, RED1, ATR4

Glucosinolate Metabolism (LitPath); all pathways

280

oxidation of indole-3-acetyldoxime; indole glucosinolate biosynthesis (Hansen et al., 2001; Bak et al.,2001); Bak and Feyereisen, 2001; Naur et al., 2003)

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At4g31500

253534_at

-

Name

Top Scoring Co-Expressed Pathway [?]

Score

Description / Known Pathway

Links [?]

AGI locus

Probeset

Cross hybridization with

CYP84A1, F5H, FAH1, CA5H

Lignin biosynthesis (TAIR-GO); all pathways

120

coniferaldehyde 5-hydroxylase; phenylpropanoid metabolism, S-lignin biosynthesis (Meyer et al., 1996; Ruegger et al., 1999; Humphreys et al., 1999)

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At4g36220

253088_at

-

CYP84A4

Phenylpropanoid Metabolism (BioPath); all pathways

82

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At5g04330

245710_at

-

Name

Top Scoring Co-Expressed Pathway [?]

Score

Description / Known Pathway

Links [?]

AGI locus

Probeset

Cross hybridization with

CYP85A1, BR6OX

there are no co-expressed pathways for this gene as it is not expressed to detectable levels in most samples; details

-

brassinosteroid-6-oxidase; brassinolide metabolism (Shimada et al., 2001; Shimada et al., 2003)

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At5g38970

249484_at

-

CYP85A2, BR6OX2

Brassinosteroid biosynthesis (TAIR-GO); all pathways

151

brassinosteroid-6-oxidase; 6-deoxycastasterone-6-oxidase; brassinolide synthase; brassinolide metabolism (Shimada et al., 2003; Nomura et al., 2005; Kim et al., 2005)

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g30180

256598_at

-

Name

Top Scoring Co-Expressed Pathway [?]

Score

Description / Known Pathway

Links [?]

AGI locus

Probeset

Cross hybridization with

CYP86A1

Stilbene, coumarine and lignin biosynthesis (KEGG); all pathways

126

ω-hydroxylase for saturated and unsaturated C12 to C18 fatty acids; fatty acid metabolism (Benveniste et al., 1998; Duan and Schuler, 2005)

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At5g58860

247765_at

-

CYP86A2

Chlorophyll biosynthesis (TAIR-GO); all pathways

275

short-chain fatty acid ω-hydroxylase (lauric acid to ω-hydroxylauric acid), fatty acid metabolism, cutin biosynthesis (Xiao et al., 2004; Duan and Schuler, 2005)

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At4g00360

255690_at

At4g00370

CYP86A4

Fatty acid elongation and wax and cutin metabolism (AcylLipid); all pathways

58

short-chain fatty acid ω-hydroxylase (lauric acid to ω-hydroxylauric acid), fatty acid metabolism (Duan and Schuler, 2005)

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g01600

259429_at

-

CYP86A7

Fatty acid elongation and wax and cutin metabolism (AcylLipid); all pathways

47

short-chain fatty acid ω-hydroxylase (lauric acid to ω-hydroxylauric acid), fatty acid metabolism (Duan and Schuler, 2005)

PlaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g63710

260241_at

-

CYP86A8, LCR

Fatty acid elongation and wax and cutin metabolism (AcylLipid); all pathways

58

lacerata; ω-hydroxylase for saturated and unsaturated C12 to C18 fatty acids; fatty acid metabolism (Wellesen et al., 2001; Duan and Schuler, 2005)

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At2g45970

266921_at

-

CYP86B1

Fatty acid elongation and wax and cutin metabolism (AcylLipid); all pathways

48

cytochrome P450 family protein, chloroplast localized (Watson et al., 2001)

PlaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At5g23190

249881_at

-

CYP86B2

Leaf Glycerolipid Biosynthesis in cytosol / ER (BioPath); all pathways

14

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At5g08250

250576_at

-

CYP86C1

Flavonoid and anthocyanin metabolism (BioPath) all pathways

26

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g24540

265020_at

-

CYP86C2

Miscellaneous acyl lipid metabolism (AcylLipid); all pathways

90

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g26125

257633_at

-

CYP86C3

Cell Wall Carbohydrate Metabolism (BioPath); all pathways

202

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g13140

262764_at

-

CYP86C4

Miscellaneous acyl lipid metabolism (AcylLipid) in organ data set; all pathways

42

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g13150

262765_at

-

Name

Top Scoring Co-Expressed Pathway [?]

Score

Description / Known Pathway

Links [?]

AGI locus

Probeset

Cross hybridization with

CYP87A2

Cell Wall Carbohydrate Metabolism (BioPath) in organ data set; all pathways

12

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g12740

255934_at

-

CYP87A3P

no probeset for this gene

-

cytochrome P450 family protein (pseudogene)

PLaCe

-

-

-

Name

Top Scoring Co-Expressed Pathway [?]

Score

Description / Known Pathway

Links [?]

AGI locus

Probeset

Cross hybridization with

CYP88A3, KAO1

Gibberellin metabolism (LitPath) in organ data set; all pathways

32

multifunctional ent-kaurenoic acid oxidase; gibberellin metabolism (Helliwell et al., 2001)

PlaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g05160

264586_at

-

CYP88A4, KAO2

Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) (BioPath) in stress data set; all pathways

301

multifunctional ent-kaurenoic acid oxidase; gibberellin metabolism (Helliwell et al., 2001)

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At2g32440

266335_at

-

Name

Top Scoring Co-Expressed Pathway [?]

Score

Description / Known Pathway

Links [?]

AGI locus

Probeset

Cross hybridization with

CYP89A2

Phenylpropanoid Metabolism (BioPath); all pathways

110

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g64900

262882_at

-

CYP89A3

Miscellaneous acyl lipid metabolism (AcylLipid) in organ data set; all pathways

36

cytochrome P450 family protein

PlaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At5g61320

247579_at

-

CYP89A4

Phenylpropanoid Metabolism (BioPath) in hormone data set; all pathways

21

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At2g12190

266154_at

-

CYP89A5

Gluconeogenesis from lipids in seeds (BioPath) in stress data set; all pathways

14

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g64950

266155_at

-

CYP89A6

there are no co-expressed pathways in any data set; view heatmaps

-

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g64940

262866_at

At1g64950; At2g12190

CYP89A7

Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) (BioPath); all pathways

20

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g64930

262865_at

At2g12190

CYP89A9

Plastoquinone biosynthesis (TAIR-GO); all pathways

50

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g03470

259058_at

-

Name

Top Scoring Co-Expressed Pathway [?]

Score

Description / Known Pathway

Links

AGI locus

Probeset

Cross hybridization with

CYP90A1, CPD

chlorophyll biosynthesis (TAIR-GO); all pathways

533

steroid 23α hydroxylase (cathasterone to teasterone); brassinolide metabolism (Szekeres et al., 1996; Kauschmann et al., 1996; Mathur et al., 1998)

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At5g05690

250752_at

-

CYP90B1, DWF4

triterpene, sterol, and brassinosteroid metabolism (LitPath) in hormone data set; all pathways

10

steroid C-22 hydroxylase (campestanol to 6-deoxocathasterone), also activity toward various C-(27-29) sterols; brassinosteroid metabolism (Choe et al., 1998; Choe et al., 2001; Fujita et al., 2006)

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g50660

252184_at

-

CYP90C1, ROT3

Steroid biosynthesis (TAIR-GO) in hormone data set; all pathways

33

steroid C-2α hydroxylase (typhasterol to castasterone); brassinolide metabolism (Kim et al., 1998; Kim et al., 2005)

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At4g36380

246216_at

-

CYP90D1

Brassinosteroid biosynthesis (TAIR-GO) in hormone data set; all pathways

16

downstream brassinosteroid synthesis, exact substrate not identified; brassinolide metabolism (Kim et al., 2005)

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g13730

256788_at

-

Name

Top Scoring Co-Expressed Pathway [?]

Score

Description / Known Pathway

Links [?]

AGI locus

Probeset

Cross hybridization with

CYP93D1

Phenylpropanoid Metabolism (BioPath); all pathways

31

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At5g06900

250651_at

-

Name

Top Scoring Co-Expressed Pathway [?]

Score

Description / Known Pathway

Links [?]

AGI locus

Probeset

Cross hybridization with

CYP94B1

Jasmonic acid biosynthesis (TAIR-GO); all pathways

22

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At5g63450

247360_at

-

CYP94B2

Isoprenoid Biosynthesis in the Cytosol and in Mitochondria (BioPath) in Stress data set; all pathways

10

cytochrome P450 family protein

PlaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g01900

258973_at

-

CYP94B3

Gibberellic acid catabolism (TAIR-GO); all pathways

27

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g48520

252368_at

-

CYP94C1

Jasmonic acid biosynthesis (TAIR-GO), all pathways

180

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At2g27690

266246_at

-

CYP94D1

Cell Wall Carbohydrate Metabolism (BioPath) in organ data set; all pathways

43

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g34540

261185_at

-

CYP94D2

Carotenoid biosynthesis (AraCyc); all pathways

100

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g56630

251699_at

-

CYP94D3P

no probeset for this gene

-

cytochrome P450 family protein (pseudogene)

PLaCe

-

-

-

Name

Top Scoring Co-Expressed Pathway [?]

Score

Description / Known Pathway

Links [?]

AGI locus

Probeset

Cross hybridization with

CYP96A1

there are no co-expressed pathways, see heatmaps

-

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At2g23180

245075_at

-

CYP96A2

Miscellaneous acyl lipid metabolism (AcylLipid); all pathways

126

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At4g32170

256297_at

-

CYP96A3

Pyruvate metabolism (KEGG) in hormone data set; all pathways

18

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g65340

264215_at

-

CYP96A4

Jasmonic acid biosynthesis (TAIR-GO); all pathways

154

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At5g52320

248353_at

-

CYP96A5

Biosynthesis of Amino Acids and Derivatives (BioPath); all pathways

70

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At2g21910

263894_at

-

CYP96A6P

Degradation of abscisic acid (LitPath) in hormone data set; all pathways

10

cytochrome P450 family protein (pseudogene)

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At5g51900

248383_at

-

CYP96A7

no probeset for this gene

-

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL

At1g47630

-

-

CYP96A8

there are no co-expressed pathways, view heatmaps

-

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g47620

262435_at

-

CYP96A9

Mono-/sesqui-/di-terpene biosynthesis (LitPath) in organ data set; all pathways

40

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At4g39480

252896_at

-

CYP96A10

no probeset for this gene

-

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL

At4g39490

-

-

CYP96A11

Gluconeogenesis from lipids in seeds (BioPath) in mutant data set; all pathways

21

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At4g39500

252898_at

-

CYP96A12

Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) (BioPath) in organ data set; all pathways

45

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At4g39510

252911_at

-

CYP96A13

Terpenoid metabolism (LitPath); all pathways

82

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At5g02900

253461_at

-

CYP96A14P

gene not expressed to detectable levels in any sample, details

-

cytochrome P450 family protein (pseudogene)

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g66030

256520_at

-

CYP96A15

Mono-/sesqui-/di-terpene biosynthesis (LitPath) in organ data set; all pathways

20

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g57750

246380_at

-

Name

Top Scoring Co-Expressed Pathway

Score

Description / Known Pathway

Links

AGI locus

Probeset

Cross hybridization with

CYP97A3, LUT5

Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) (BioPath); all pathways

870

a-carotene -ring hydroxylase; carotenoid metabolism (Kim and DellaPenna, 2006)

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g31800

246268_at

-

CYP97B3

Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) (BioPath); all pathways

870

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At4g15110

245532_at

-

CYP97C1, LUT1

Chlorophyll biosynthesis (AraCyc); all pathways

314

carotenoid ε-ring hydroxylase; carotenoid metabolism (Tian et al., 2004)

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g53130

251969_at

-

Name

Top Scoring Co-Expressed Pathway [?]

Score

Description / Known Pathway

Links [?]

AGI locus

Probeset

Cross hybridization with

CYP98A3, C3'H

Lignin biosynthesis (AraCyc); all pathways

514

4-coumaryl shikimic/quinic ester 3’-hydroxylase; phenylpropanoid metabolism, lignin biosynthesis (Schoch et al. 2001, Franke et al., 2002a, Franke et al, 2002b, Nair et al., 2002; Abdulrazzak et al., 2006)

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At2g40890

245101_at

-

CYP98A8

Cell Wall Carbohydrate Metabolism (BioPath); all pathways

245

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g74540

260228_at

-

CYP98A9

Miscellaneous acyl lipid metabolism (AcylLipid); all pathways

98

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g74550

260233_at

-

Name

Top Scoring Co-Expressed Pathway [?]

Score

Description / Known Pathway

Links [?]

AGI locus

Probeset

Cross hybridization with

CYP701A3, GA3

Gibberellin metabolism (LitPath); all pathways

70

multifunctional ent-kaurene oxidase; gibberellin metabolism (Helliwell et al., 1998; Helliwell et al., 1999; Swain et al., 2005)

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At5g25900

246864_at

-

Name

Top Scoring Co-Expressed Pathway [?]

Score

Description / Known Pathway

Links [?]

AGI locus

Probeset

Cross hybridization with

CYP702A1

Abscisic acid biosynthesis (TAIR-GO); all pathways

36

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g65670

264634_at

-

CYP702A2

Cell Wall Carbohydrate Metabolism (BioPath) in stress data set; all pathways

45

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At4g15300

245547_at

-

CYP702A3

Pentacyclic triterpenoid biosynthesis (GO) in stress data set; all pathways

7

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At4g15310

245548_at

-

CYP702A4P

no probeset for this gene

-

cytochrome P450 family protein (pseudogene)

PLaCe

-

-

-

CYP702A5

no probeset for this gene

-

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL

At4g15393

-

-

CYP702A6

no probeset for this gene

-

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL

At4g15396

-

-

CYP702A7P

no probeset for this gene

-

cytochrome P450 family protein (pseudogene)

PLaCe

-

-

-

CYP702A8

Flavonoid and anthocyanin metabolism (BioPath) in stress data set: all pathways

7

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g30290

256705_at

-

Name

Top Scoring Co-Expressed Pathway [?]

Score

Description / Known Pathway

Links [?]

AGI locus

Probeset

Cross hybridization with

CYP703A2

Cellulose biosynthesis (BioPath); all pathways

66

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g01280

261051_at

-

Name

Top Scoring Co-Expressed Pathway

Score

Description / Known Pathway

Links

AGI locus

Probeset

Cross hybridization with

CYP704A1

C-compound and carbohydrate metabolism (FunCat); all pathways

66

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At2g44890

267500_s_at

At2g45510

CYP704A2

C-compound and carbohydrate metabolism (FunCat); all pathways

66

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At2g45510

267500_s_at

At2g44890

CYP704B1

there are no co-expressed pathways in any data set, view heatmaps

-

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g69500

257627_at

At3g26270

Name

Top Scoring Co-Expressed Pathway [?]

Score

Description / Known Pathway

Links [?]

AGI locus

Probeset

Cross hybridization with

CYP705A1

Triterpene, sterol, and brassinosteroid metabolism (LitPath); all pathways

30

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At4g15330

245550_at

-

CYP705A2

Terpenoid metabolism (LitPath); all pathways

28

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At4g15350

245551_at

-

CYP705A3

Pentacyclic triterpenoid biosynthesis (TAIR-GO), in stress data set; all pathways

7

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At4g15360

245552_at

-

CYP705A4

Mono-/sesqui-/di-terpene biosynthesis (LitPath) in organ data set; all pathways

23

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At4g15380

245554_at

-

CYP705A5

Stilbene, coumarine and lignin biosynthesis (KEGG) in organ data set; all pathways

42

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At5g47990

248727_at

-

CYP705A6

Chlorophyll biosynthesis and breakdown (BioPath) in hormone data set; all pathways

10

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At2g05180

263107_at

-

CYP705A8

Cell Wall Carbohydrate Metabolism (BioPath) in organ data set; all pathways

51

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At2g27000

266307_at

-

CYP705A9

Phenylpropanoid Metabolism (BioPath); all pathways

22

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At2g27010

266308_at

-

CYP705A10P

no probeset for this gene

-

cytochrome P450 family protein (pseudogene)

PLaCe

-

-

-

CYP705A11P

no probeset for this gene

-

cytochrome P450 family protein (pseudogene)

PLaCe

-

-

-

CYP705A12

Biosynthesis of steroids (KEGG); all pathways

77

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At5g42580

249202_at

-

CYP705A13

Stilbene, coumarine and lignin biosynthesis (KEGG) in organ data set; all pathways

64

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At2g14100

263276_at

-

CYP705A14P

no probeset for this gene

-

cytochrome P450 family protein (pseudogene)

PLaCe

-

-

-

CYP705A15

Terpenoid metabolism (LitPath); all pathways

24

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g20080

257128_at

-

CYP705A16

no probeset for this gene

-

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL

At3g20083

-

-

CYP705A17P

no probeset for this gene

-

cytochrome P450 family protein (pseudogene)

PLaCe

-

-

-

CYP705A18

Cell Wall Carbohydrate Metabolism (BioPath); all pathways

28

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g20090

257142_at

-

CYP705A19

Arginine and proline metabolism (KEGG); all pathways

18

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g20100

257129_at

At3g20080

CYP705A20

Ribosome (KEGG) in hormone data set; all pathways

46

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g20110

257143_at

-

CYP705A21

Benzoate degradation via CoA ligation (KEGG) in organ data set; all pathways

11

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g20120

257112_at

-

CYP705A22

Cell Wall Carbohydrate Metabolism (BioPath); all pathways

64

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g20130

257113_at

-

CYP705A23

Leaf Glycerolipid Biosynthesis (BioPath) in hormone data set; all pathways

37

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g20140

257114_at

-

CYP705A24

Cell Wall Carbohydrate Metabolism (BioPath); all pathways

125

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g28430

261499_at

-

CYP705A25

Stilbene, coumarine and lignin biosynthesis (KEGG); all pathways

108

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g50560

261878_at

-

CYP705A26P

no probeset for this gene

-

cytochrome P450 family protein (pseudogene)

PLaCe

-

-

-

CYP705A27

Cell Wall Carbohydrate Metabolism (BioPath) in organ data set; all pathways

45

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g50520

261879_at

-

CYP705A28

no probeset for this gene

-

cytochrome P450 family protein

PLaCe

-

-

-

CYP705A29P

no probeset for this gene

-

cytochrome P450 family protein

PLaCe

-

-

-

CYP705A30

Biosynthesis of steroids (KEGG) in organ data set; all pathways

21

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g20940

256801_at

-

CYP705A31P

no probeset for this gene

-

cytochrome P450 family protein (pseudogene)

PLaCe

-

-

-

CYP705A32

Cell Wall Carbohydrate Metabolism (BioPath) in mutant data set; all pathways

170

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g20950

256802_at

At3g20940

CYP705A33

Methane metabolism (KEGG) in organ data set; all pathways

10

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g20960

256803_at

-

CYP705A34P

no probeset for this gene

-

cytochrome P450 family protein (pseudogene)

PLaCe

-

-

-

Name

Top Scoring Co-Expressed Pathway [?]

Score

Description / Known Pathway

Links [?]

AGI locus

Probeset

Cross hybridization with

CYP706A1

Glutathione metabolism (BioPath); all pathways

56

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At4g22690

254331_s_at

At4g22710

CYP706A2

Glutathione metabolism (BioPath); all pathways

56

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At4g22710

254331_s_at

At4g22690

CYP706A3

Cell Wall Carbohydrate Metabolism (BioPath) in organ data set; all pathways

31

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At5g44620

249012_at

-

CYP706A4

Biosynthesis of Amino Acids and Derivatives (BioPath) in organ data set; all pathways

22

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At4g12300

254834_at

-

CYP706A5

Photosystems (BioPath); all pathways

878

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At4g12310

254835_s_at

-

CYP706A6

no probeset for this gene

-

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL

At4g12320

-

-

CYP706A7

Biosynthesis of steroids (KEGG); all pathways

28

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At4g12330

254836_at

-

Name

Top Scoring Co-Expressed Pathway [?]

Score

Description / Known Pathway

Links [?]

AGI locus

Probeset

Cross hybridization with

CYP707A1

Abscisic acid biosynthesis (AraCyc); all pathways

20

abscisic acid 8’-hydroxylase; abscisic acid degradation (Saito et al., 2004; Kushiro et al., 2004; Okamoto et al., 2006)

PlaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At4g19230

254562_at

-

CYP707A2

Phenylpropanoid Metabolism (BioPath) in organ data set; all pathways

20

abscisic acid 8’-hydroxylase; abscisic acid degradation (Saito et al., 2004; Kushiro et al., 2004; Okamoto et al., 2006; Millar et al., 2006)

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At2g29090

266778_at

-

CYP707A3

Secondary metabolism (FunCat); all pathways

42

abscisic acid 8’-hydroxylase; abscisic acid degradation (Saito et al., 2004; Kushiro et al., 2004; Kitahata et al., 2005; Ueno et al., 2005; Umezawa et al., 2006; Millar et al., 2006; Saito et al., 2006; Araki et al., 2006)

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At5g45340

248964_at

-

CYP707A4

Sterol biosynthesis (BioPath); all pathways

36

abscisic acid 8’-hydroxylase; abscisic acid degradation (Saito et al., 2004; Kushiro et al., 2004)

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g19270

257035_at

-

Name

Top Scoring Co-Expressed Pathway [?]

Score

Description / Known Pathway

Links [?]

AGI locus

Probeset

Cross hybridization with

CYP708A1

Stilbene, coumarine and lignin biosynthesis (KEGG); all pathways

34

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g55940

260599_at

-

CYP708A2

Monoterpene biosynthesis (LitPath); all pathways

75

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At5g48000

248728_at

-

CYP708A3

Photosystems (BioPath) in organ data set; all pathways

335

cytochrome P450 family protein

PLace / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g78490

263120_at

-

CYP708A4

Flavonoid, anthocyanin, and proanthocyanidin biosynthesis (LitPath) in hormone data set; all pathways

20

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At3g44970

252629_at

-

Name

Top Scoring Co-Expressed Pathway [?]

Score

Description / Known Pathway

Links [?]

AGI locus

Probeset

Cross hybridization with

CYP709B1

Cell Wall Carbohydrate Metabolism (BioPath); all pathways

40

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At2g46960

266736_at

-

CYP709B2

Fatty acid elongation and wax and cutin metabolism (AcylLipid) in hormone data set; all pathways

18

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At2g46950

266756_at

-

CYP709B3

Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) (BioPath); all pathways

620

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At4g27710

253886_at

-

Name

Top Scoring Co-Expressed Pathway [?]

Score

Description / Known Pathway

Links [?]

AGI locus

Probeset

Cross hybridization with

CYP710A1

Phenylpropanoid Metabolism (BioPath); all pathways

105

Sterol C-22 Desaturase (ß-sitosterol to stigmasterol); sterol biosynthesis (Morikawa et al., 2006)

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At2g34500

266995_at

-

CYP710A2

Gamma-Hexachlorocyclohexane degradation (KEGG); all pathways

60

Sterol C-22 Desaturase (24-epi-campesterol to brassicasterol), sterol biosynthesis (Morikawa et al., 2006)

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At2g34490

266996_at

-

CYP710A3

Biosynthesis of Amino Acids and Derivatives (BioPath) in hormone data set; all pathways

26

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At2g28850

266218_s_at

At2g28860

CYP710A4

Biosynthesis of Amino Acids and Derivatives (BioPath) in hormone data set; all pathways

26

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At2g28860

266218_s_at

At2g28850

Name

Top Scoring Co-Expressed Pathway [?]

Score

Description / Known Pathway

Links [?]

AGI locus

Probeset

Cross hybridization with

CYP711A1, MAX1

Core phenylpropanoid metabolism (BioPath); all pathways

10

Biosynthesisi of a likely carotenoid-derived hormone with branch-inhibiting activity, exact substrate not identified (Booker et al., 2005)

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At2g26170

267380_at

-

Name

Top Scoring Co-Expressed Pathway [?]

Score

Description / Known Pathway

Links [?]

AGI locus

Probeset

Cross hybridization with

CYP712A1

Stilbene, coumarine and lignin biosynthesis (KEGG) in stress data set; all pathways

36

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At2g42250

267626_at

-

CYP712A2

no probeset for this gene

-

cytochrome P450 family protein

PlaCe / MIPS / Tair / Tigr / SIGnAL

At5g06905

-

-

Name

Top Scoring Co-Expressed Pathway [?]

Score

Description / Known Pathway

Links [?]

AGI locus

Probeset

Cross hybridization with

CYP714A1

Abscisic acid biosynthesis (TAIR-GO); all pathways

45

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At5g24910

246978_at

-

CYP714A2

Cell Wall Carbohydrate Metabolism (BioPath) in organ data set; all pathways

34

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At5g24900

246970_at

-

Name

Top Scoring Co-Expressed Pathway [?]

Score

Description / Known Pathway

Links [?]

AGI locus

Probeset

Cross hybridization with

CYP715A1

Biosynthesis of Amino Acids and Derivatives (BioPath); all pathways

132

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At5g52400

248358_at

-

Name

Top Scoring Co-Expressed Pathway [?]

Score

Description / Known Pathway

Links [?]

AGI locus

Probeset

Cross hybridization with

CYP716A1

Photosystems (BioPath) in mutant data set; all pathways

22

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At5g36110

249684_s_at

-

CYP716A2

Monoterpene biosynthesis (LitPath); all pathways

46

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At5g36140

249686_at

-

Name

Top Scoring Co-Expressed Pathway [?]

Score

Description / Known Pathway

Links [?]

AGI locus

Probeset

Cross hybridization with

CYP718

Biosynthesis of prenyl diphosphates (BioPath); all pathways

20

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At2g42850

263970_at

-

Name

Top Scoring Co-Expressed Pathway [?]

Score

Description / Known Pathway

Links [?]

AGI locus

Probeset

Cross hybridization with

CYP720A1

Phenylpropanoid Metabolism (BioPath) in mutant data set; all pathways

88

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g73340

245728_at

-

Name

Top Scoring Co-Expressed Pathway [?]

Score

Description / Known Pathway

Links [?]

AGI locus

Probeset

Cross hybridization with

CYP721A1

there are no co-expressed pathways; view heatmaps

-

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g75130

259954_at

-

Name

Top Scoring Co-Expressed Pathway [?]

Score

Description / Known Pathway

Links [?]

AGI locus

Probeset

Cross hybridization with

CYP722A1

there are no co-expressed pathways; view heatmaps

-

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g19630

261134_at

-

Name

Top Scoring Co-Expressed Pathway [?]

Score

Description / Known Pathway

Links [?]

AGI locus

Probeset

Cross hybridization with

CYP724A1

chorismate biosynthesis (AraCyc); all pathways

86

cytochrome P450 family protein

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At5g14400

250176_at

-

Name

Top Scoring Co-Expressed Pathway [?]

Score

Description / Known Pathway

Links [?]

AGI locus

Probeset

Cross hybridization with

CYP734A1, BAS1

Triterpene, sterol, and brassinosteroid metabolism (LitPath), all pathways

57

26-hydroxylase for brassinolide and castasterone; brassinolide degradation (Neff et al., 1999; Turk et al., 2003; Turk et al., 2005)

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At2g26710

267614_at

-

Name

Top Scoring Co-Expressed Pathway [?]

Score

Description / Known Pathway

Links [?]

AGI locus

Probeset

Cross hybridization with

CYP735A1

Cell Wall Carbohydrate Metabolism (BioPath) in mutant data set, all pathways

258

trans-hydroxylase for isopentenyladenine, tri/di/monophosphates; cytokinin metabolism (Takei et al., 2004)

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At5g38450

249566_at

-

CYP735A2

Cell Wall Carbohydrate Metabolism (BioPath) in mutant data set; all pathways

196

trans-hydroxylase for isopentenyladenine, tri/di/monophosphates; cytokinin metabolism (Takei et al., 2004)

PLaCe / MIPS / Tair / Tigr / SIGnAL / eFP browser / ResponseViewer

At1g67110

264470_at

-



Page created by Jürgen Ehlting, last updated: 20/07/06