Co-Expression Analysis of: CYP706A5 (At4g12310) Institut de Biologie Moléculaire des Plantes































































































































































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Organ and Tissue Data Set view / save heatmap as: OpenOffice table annotation details for co-expressed genes can be found to the right of the heatmap
















































































































































































MS Excel table
















































































































































































save / view all data as: Tab delimited Table For further information on the experiments please go to the Genevestigator database using the experiment-ID given in brackets.













































































































































































shown are a maximum of 50 genes with r>0.5 (If more co-expressed genes with r>0.5 exist, they can be saved as Tab delimited data only) magnitude of change [log2(sample / average)]  0   0.3   0.6   0.9  1.2   1.5   1.8   2.1   2.4   2.7   >2.99 










































































































































































greater than zero                                                         










































































































































































less than zero                                                         










































































































































































Locus r-value Name Description suspension cell, aphidicolin, 0h ( 5) suspension cell, aphidicolin, 2h (5) suspension cell, aphidicolin, 4h (5) suspension cell, aphidicolin, 6h (5) suspension cell, aphidicolin, 8h (5) suspension cell, aphidicolin, 10h (5) suspension cell, aphidicolin, 12h (5) suspension cell, aphidicolin, 14h (5) suspension cell, aphidicolin, 16h (5) suspension cell, aphidicolin, 19h (5) suspension cell, sucrose, 0h (6) suspension cell, sucrose, 2h (6) suspension cell, sucrose, 4h (6) suspension cell, sucrose, 6h (6) suspension cell, sucrose, 8h (6) suspension cell, sucrose, 10h (6) suspension cell, sucrose, 12h (6) suspension cell, 1d (19) suspension cell, 1d (19) suspension cell, 5d (19) suspension cell, 7d (19) suspension cell, senescing (20) protoplast (62) suspension cell, light (153) suspension cell, dark (153) callus, transdifferentiation A1 (78) callus, transdifferentiation A2 (78) callus, transdifferentiation A3 (78) callus, transdifferentiation A4 (78) callus, transdifferentiation A5 (78) callus, transdifferentiation A6 (78) seedling (59) seedling (137) seedling (138) seedling (143) seedling (144) seedling, cont. light, 26h (149) seedling, cont. light, 26h (149) seedling, cont. light, 34h (149) seedling, cont. light, 38h (149) seedling, cont. light, 42h (149) seedling, cont. light, 46h (149) seedling, cont. light, 50h (149) seedling, cont. light, 54h (149) seedling, cont. light, 58h (149) seedling, cont. light, 62h (149) seedling, cont. light, 66h (149) seedling, cont. light, 70h (149) seedling, cont. light, 74h (149) seedling, far red then white light (83) seedling, dark then white light (83) Cotyledon (87) Hypocotyl (87) Hypocotyl (139) leaf, dedifferentiation A01 (50) leaf, dedifferentiation A02 (50) leaf, dedifferentiation A81 (50) leaf, dedifferentiation A82 (50) leaf, dedifferentiation A301 (50) leaf, dedifferentiation A302 (50) leaf, dedifferentiation A481 (50) leaf, dedifferentiation A482 (50) leaf, dedifferentiation B01 (50) leaf, dedifferentiation B02 (50) leaf, whole rosette, 0h (56) leaf, whole rosette, 0h (56) leaf, whole rosette, 2h (56) leaf, whole rosette, 4h (56) leaf, whole rosette, 8h (56) leaf, whole rosette, 12h (56) leaf, whole rosette, 13h (56) leaf, whole rosette, 14h (56) leaf, whole rosette, 16h (56) leaf, whole rosette, 20h (56) leaf, whole rosette, 24h (56) leaf, whole rosette, 0h (56) leaf, whole rosette, 4h (56) leaf, whole rosette, 8h (56) leaf, whole rosette, 12h (56) leaf, whole rosette, 16h (56) leaf, whole rosette, 20h (56) leaf, mature, high light (68) leaf, mature, low light (68) leaf stage 7, petiol (88) leaf stage 7, proximal half (88) leaf stage 7, distal half (88) guard cell enriched (11) senescing leaf, Col5 (60) senescing leaf, Col0 (60) senescing leaf (88) cauline leaf (88) roots (87) whole roots, A. halleri (101) whole roots, A. petrea (101) roots (141) mature roots (23) lateral roots (24) lateral roots (29) roots, axillary buds, dormant (30) roots, axillary buds, active (30) Roots, N03 depleted, dex treated (64) Roots, N03 depleted (64) root elongation zone (79) stem (80) stem (88) stem, base (66) stem, tip (66) stem, 1st node (88) stem, base, injured with needle (8) shoot apex (87) shoot apex (87) shoot apex (88) apical region, vegetative, Col (94) apical region, reproductive, 3d, Col (94) apical region, reproductive, 5d, Col (94) apical region, reproductive, 7d, Col (94) apical region, vegetative, Ler (94) apical region, reproductive, 3d, Ler (94) apical region, reproductive, 5d, Ler (94) apical region, reproductive, 7d, Ler (94) flower, stage 9 (89) flower, stage 10 (89) flower, stage 12 (89) flower, stage 15 (89) flower-silique, stage I (84) flower-silique, stage II (84) flower-silique, stage III (84) flower bud, young (9) flower bud, old (9) flower (80) flower (92) flower (100) sepal, stage 12 (89) sepal, stage 15 (89) petal, stage 12 (89) petal, stage 15 (89) stamen, stage 12 (89) stamen, stage 15 (89) carpel, stage 12 (89) carpel, stage 15 (89) pedicel, stage 15 (89) pollen, uninucleate microspores (22) pollen, bicellular (22) pollen, tricellular (22) pollen, mature (22) pollen (74) silique, young (136) silique, old (136) silique, stage 3 (90) silique, stage 4 (90) silique, stage 5 (90) seed, stage 6 (90) seed, stage 7 (90) seed, stage 8 (90) seed, stage 9 (90) seed, stage 10 (90) seed, dry (116) seed, dry (117) seed, fresh (96) seed, dormant (96) seed, imbibed, 1h (117) seed, imbibed, 3h (117) seed, imbibed, 22°C (118) seed, imbibed, far red, 22°C (132) seed, imbibed, 4°C (118) seed, imbibed, far red, 4°C (132) seed, imbibed (116) Locus Probeset Name Description Annotation score GO.keywords FunCat keywords AraCyc annotations KEGG annotations BioPath annotations AcylLipid category Literature annotations Gene family 90% quantile of DE max. DE
At4g12310 1.000 CYP706A5 cytochrome P450 family protein -2.02 -1.48 -2.06 -2.06 -2.06 -1.73 -0.71 -2.06 -0.97 -2.06 1.2 -1.32 -2.06 -1.29 -1.31 -1.36 -2.06 -2.06 -2.06 -2.06 -1.02 -0.81 2.15E-001 3.41 1.99 -2.09 -2.06 -2.06 -2.06 -2.06 -2.06 2.76 2.53 2.64 3.26 1.05 2 2.12 3.08 3.06 2.86 2.19 1.9 2.39 3.01 3.12 2.63 2.11 1.81 2.45 3 3.44 1.47 1.42 2.66 1.55 3.28 2.49 1.38 1.17 1.4 0.65 -2.06 -1.9 4.27 3.15 3.21 3.43 3.28 2.26 2.95 3.72 4.08 4.47 4.48 1.66 3.52 4.21 4.12 3.44 2.91 3.84 3.75 0.83 1.64 1.84 0.8 3.85 3.13 1.12 0.88 -2.27 -2.06 -2.06 -2.01 -1.79 -2.06 -2.06 -2.06 -2.06 -2.03 -1.75 -1.81 1.48 1.06 1.78 0.13 0.7 0.91 0 -0.71 -2.06 -1.56 -1.89 -2.46 -2.06 0.2 -1.04 -1.68 -2.21 -2.14 -2.32 -2.29 -2.15 -0.58 -0.5 -1.73 -0.04 0.17 -1.18 -2.06 -0.95 -1.17 -1.49 -2.06 -2.53 -2.06 -2.43 -2.29 -2.43 0.27 -2.06 -1.5 -2.06 -2.06 -2.06 -0.05 -0.37 -2.1 0.11 -0.81 -2.06 -2.06 -2.06 -1.34 -2.06 -2.06 -2.33 -1.93 -1.37 -2.06 -2.41 -1.33 -1.33 -1.19 -1.45E+000 -2.21 At4g12310 254835_s_at CYP706A5 cytochrome P450 family protein 1
biosynthesis of secondary products derived from primary amino acids | biosynthesis of glycosinolates and derivatives




cytochrome P450 family 6.03 7.02
At2g20570 0.846 GPRI1 golden2-like transcription factor (GLK1). Encodes a protein containing a GARP DNA-binding domain which interacts with the Pro-rich regions of GBF1 and GBF3. Transactivates transcription in yeast. -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 1.52 -0.2 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 1.66 0.53 1.48 1.61 0.61 1.56 1.85 1.65 1.73 1.9 2.04 2.06 1.88 1.99 2.04 2.06 2.02 2.4 -1.35 -1.35 1.67 -0.23 1.09 2.71 2.45 0.96 1.3 2.17 1.39 1.26 0.62 0.11 -0.68 2.34 1.5 1.8 2.02 1.93 1.99 2.62 3.04 2.65 2.44 2.31 1.34 2.36 2.21 2.35 1.72 1.94 2.22 2.5 0.94 1.38 1.58 0.93 1.11 0.92 1.89 2.76 -1.35 0.32 -0.17 -1.35 -1.35 -1.35 -1.35 0.61 1.32 -1.35 -1.35 -1.35 -1.35 1.59 0.3 -1.35 0.19 0.21 1.02 0.23 -0.65 -0.55 -0.48 -0.96 -1.15 0.03 -0.6 -1.3 -1.07 0.24 0.11 -1.22 -0.83 -0.45 -1.35 -1.35 0.36 -0.43 -1.35 -0.27 -0.3 -1.3 -0.17 -1.35 -1.35 -1.35 -1.35 -1.35 -1.21 0.43 -1.35 -1.35 -1.35 -1.35 -1.35 0.45 0.7 0.13 -0.48 -0.77 -0.66 -1.18 -1.35 -1.35 -1.35 -1.35 -1.35 -1.23 -1.35 -1.74 -1.35 -1.35 -1.35 -1.35 -1.35 -1.4 At2g20570 263715_at GPRI1 golden2-like transcription factor (GLK1). Encodes a protein containing a GARP DNA-binding domain which interacts with the Pro-rich regions of GBF1 and GBF3. Transactivates transcription in yeast. 10 transcription regulator activity | positive regulation of transcription


Transcriptional regulators (chloroplast)


3.74 4.78
At5g42310 0.829
pentatricopeptide (PPR) repeat-containing protein -0.77 -1.58 -1.25 -1.51 -0.91 -0.54 -0.95 -0.94 -0.72 -1.21 0.77 0.05 -0.47 -0.23 -0.69 -0.54 -0.07 -1.25 -0.73 -1.13 -0.41 -1.15 -0.78 1.15 1.17 -1.39 -1.8 -1.12 -1.36 -1.47 -1.94 0.98 0.26 1.34 0.78 0.2 0.91 0.84 0.96 1.07 1.28 1.19 1 1.01 0.92 1.2 1.33 0.9 0.57 0.18 0.72 1.17 -0.74 -0.74 1.84 0.85 0.69 0.4 0.14 0.43 0.52 -0.07 -1.1 -0.75 1.64 1.46 1.2 1.34 1.57 1.44 1.1 1.63 1.79 1.47 1.49 0.87 1.53 1.37 1.48 1.4 1.36 1.22 1.27 0.43 1.04 0.91 0.48 0.86 0.7 0.48 1.31 -2.18 -0.95 -1.47 -1.35 -1.52 0.04 -1.47 0.46 0.76 -1.6 -1.42 -1.37 0.71 0.37 0.42 0.06 0.01 0.72 0.59 -0.1 -0.23 -0.43 -0.33 -0.43 -0.21 -0.3 -0.56 -0.56 -0.2 -0.04 0.22 0.1 -0.05 -0.07 0.02 0.17 0.01 -0.07 0.36 -0.01 -0.11 0.83 0.11 -0.38 -0.25 -1.67 -0.69 -0.4 -0.25 1.02 -1.47 -1.47 -1.33 -1.47 -1.47 0.76 0.57 -0.12 0.23 -0.14 -0.75 -0.87 -1.06 -0.78 -1.03 -0.61 -0.53 -0.62 -0.11 -0.83 -1.37 -0.82 -0.82 0.46 0.17 -0.12 At5g42310 249247_at
pentatricopeptide (PPR) repeat-containing protein 2



mRNA processing in chloroplast


2.94 4.01
At3g48720 0.827
transferase family protein, similar to hypersensitivity-related hsr201 protein - Nicotiana tabacum -1.7 1.43 -1.7 -1.7 -1.7 -1.7 -1.7 -1.7 -1.7 -1.7 -1.7 4.53 -1.7 -1.7 -1.7 -1.7 -1.7 -1.7 -1.7 -1.7 -1.7 -1.7 1.72 1.98 2.11 -1.7 -1.7 -1.7 -1.7 -1.7 -1.7 2.06 1.04 1.59 3.1 1.32 1.36 1.79 2.12 2.02 1.83 1.34 1.47 1.78 1.08 1.17 1.06 0.93 0.92 -0.86 1.21 3.7 0.66 1.89 1.35 0.78 0.85 0.35 1.01 0.51 -1.7 -1.7 -1.7 -1.7 2.79 2.62 3.49 3.41 3.37 3.17 2.96 3.5 3.29 2.88 2.52 2.7 2.45 2.04 2.17 2.56 2.93 3.59 4.01 2.64 3.37 3.24 0.77 2.43 2.25 -0.42 3.21 -1.7 -0.68 -1.21 -1.7 -1.7 -1.7 -1.7 0.08 -0.18 -1.7 -1.7 -1.7 2.91 2.76 0.5 1.3 1.87 -0.18 0.02 -1.67 -1.7 -1.7 -1.7 -1.7 -1.7 -2.06 -1.7 -1.7 -1.7 -1.7 -1.7 -1.7 -1.06 -0.87 -0.42 1.12 -1.7 -1.7 0.75 -1.7 -0.06 0.42 -0.54 -1.7 -1.68 -1.7 -1.7 -1.7 -1.02 3.05 -1.7 -1.7 -1.7 -1.7 -1.7 1.58 0.46 1.82 0.19 -1.08 -1.7 -1.7 -1.7 -1.7 -1.7 -1.7 -1.7 -1.7 -1.7 -1.7 -1.7 -1.7 -1.7 -1.7 -1.7 -1.7 At3g48720 252317_at
transferase family protein, similar to hypersensitivity-related hsr201 protein - Nicotiana tabacum 1
secondary metabolism | disease, virulence and defense | defense related proteins




acyltransferase, BAHD family 5.05 6.60
At3g01440 0.818
oxygen evolving enhancer 3 (PsbQ) family protein, photosystem II oxygen-evolving complex protein; -1.82 -1.82 -1.82 -1.82 -1.82 -1.82 -1.82 -1.82 -1.82 -1.82 -1.82 -1.82 -1.82 -1.82 -1.82 -1.82 -1.82 -1.82 -1.82 -1.82 -1.82 -1.82 -1.82 2.04 0.6 -1.82 -1.82 -1.82 -1.6 -1.82 -1.22 1.57 1.38 1.59 2.11 0.31 1.06 1.1 2.23 2.77 2.43 1.61 0.95 1.32 2.5 2.67 2.64 1.91 1 0.9 1.38 2.22 -1.19 -0.34 1.26 -0.25 1.05 0.59 -0.71 -0.71 -0.83 -1.44 -1.82 -1.82 3.39 2.84 2.86 3.01 2.88 1.95 1.94 1.99 2.24 2.59 3.33 1.52 1.9 2.39 3.45 3.13 2.99 3.01 2.88 2.13 3.05 2.72 0.79 2.88 1.7 -0.55 1.73 -1.82 -0.12 0.12 -1.82 -1.82 -1.82 -1.82 0.04 1.14 -1.82 -1.82 -1.82 1.57 -0.02 0.45 1.76 0.16 1.3 1.12 -0.25 -0.63 -1.09 -0.77 -1.19 -1.61 -0.25 -1.03 -1.14 -1.2 0.63 1.27 0.97 -0.08 0.3 -0.17 1.07 0.6 0.66 0.87 0.61 0.62 1.71 -1.38 0.12 -1.61 -1.82 -1.82 -0.15 0.6 2.19 -1.82 -1.82 -1.82 0.11 -1.82 1.33 -0.64 1.17 0.47 -0.07 -1.39 -1.7 -1.82 -1.65 -1.82 -1.82 -1.82 -1.45 -1.82 -2.17 -2.33 -1.85 -1.85 -1.82 -1.82 -1.82 At3g01440 258956_at
oxygen evolving enhancer 3 (PsbQ) family protein, photosystem II oxygen-evolving complex protein; 4 oxygen evolving complex | photosynthesis, light reaction


Photosystems | Photosystem II | Oxygen-evolving enhancer protein


4.70 5.78
At3g19480 0.813
D-3-phosphoglycerate dehydrogenase, putative / 3-PGDH, putative -1.65 -1.65 -1.65 -1.65 -0.16 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 0.59 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.12 3.08 2.7 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 2.17 0.65 2.69 1.59 0.87 0.96 1.05 1.2 0.83 1.48 2.02 1.46 0.93 1.46 1.27 1.73 1.8 0.95 0.99 2.25 2.83 0.28 -1.65 2.39 0.35 0.62 0.23 -0.03 0.57 0.44 0.32 -1.65 -0.41 2.44 2.23 2.17 2.41 2.59 2.34 2.61 2.78 2.96 2.4 2.29 2.44 3.06 2.45 2.24 2.6 2.93 2.92 2.76 1.87 2.67 2.39 1.58 1.64 0.74 -0.24 1.67 -1.65 -1.65 0.06 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 1.63 0.88 -1.65 -0.09 1.3 -1.65 1.03 -0.07 -1.01 -0.84 -0.6 -1.22 -1.31 -0.82 -1.65 -1.52 -1.91 -0.01 0.88 0.63 0.16 0.15 -0.25 1.11 -1.65 -0.83 0.49 0.34 0.14 2.16 0.26 -0.33 0.06 -1.65 -1.11 -0.78 0.13 2.58 -1.65 -1.65 -1.65 -1.65 -1.65 1.43 -0.34 1.42 1.03 0.46 -1.37 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 At3g19480 258025_at (m)
D-3-phosphoglycerate dehydrogenase, putative / 3-PGDH, putative 4

phosphoglycerate dehydrogenase, cysteine biosynthesis II | phosphoglycerate dehydrogenase, serine biosynthesis Glycine, serine and threonine metabolism



4.35 4.99
At3g25760 0.813 AOC1 encodes allene oxide cyclase. One of four genes in Arabidopsis that encode this enzyme, which catalyzes an essential step in jasmonic acid biosynthesis. Gene expression is induced during scenescence, a process that involves jasmonic acid signalling pathw -3.19 -3.19 -3.19 -3.19 -3.19 -3.19 -3.19 -3.19 -3.19 -3.19 -3.19 -3.19 -3.19 -3.19 -3.19 -3.19 -3.19 -3.19 -3.19 -3.19 -3.19 -3.19 -3.19 3.47 3.89 -3.19 -3.19 -3.19 -3.19 -3.19 -3.19 1.03 4.55 3.22 4.63 2.76 2.63 2.79 3.66 3.78 3.74 3.11 3.3 3.46 4.32 4.16 3.67 3.78 4.34 1.66 0.99 5.73 1.17 4.16 3.67 3.8 5 4.99 5.7 5.52 4.41 3.45 0.38 -3.19 4.79 4.88 5.39 5.33 4.84 2.99 3.12 4 5.17 5.4 5.37 3.4 4.65 5.28 5.4 5.04 4.09 2.97 2.82 4.45 5.38 5.56 4.01 4.55 4.68 4.05 2.46 -2.41 2.85 3.9 -2.17 -3.19 -3.19 -0.81 -3.19 -3.19 -0.12 -0.65 -0.82 -3.19 -2.73 -3.19 -3.19 -0.37 2.08 3.03 0.83 -1.79 0.17 -0.16 -0.63 -2.8 -1.21 -3.3 -3.19 -3.19 0.48 0 -0.37 0.71 -3.19 -3.19 -3.19 -3.19 -3.19 -2.54 0.44 -3.19 1.07 1.98 -1.71 -0.44 -2.6 1.8 -3.12 -3.19 -1.99 -3.19 -3.19 -3.19 -3.19 -3.19 -3.19 -3.19 -3.19 -3.19 -3.19 -3.19 -3.19 -3.19 -3.19 -3.19 -3.19 -3.19 -3.19 -3.19 -3.19 -3.19 -2.1 -2.1 -3.19 -3.19 -3.19 At3g25760 257641_s_at AOC1 encodes allene oxide cyclase. One of four genes in Arabidopsis that encode this enzyme, which catalyzes an essential step in jasmonic acid biosynthesis. Gene expression is induced during scenescence, a process that involves jasmonic acid signalling pathw 6 response to dessication | jasmonic acid biosynthesis
jasmonic acid biosynthesis | lipoxygenase pathway

Lipid signaling

8.55 9.03
At3g01660 0.806
expressed protein -1.52 -1.52 -1.52 -1.52 -1.52 -1.52 -1.52 -1.52 -0.54 -1.52 -0.07 -0.94 -1.52 -1.52 -1.52 -1.75 -1.52 -1.52 -1.52 -1.52 -1.52 -1.52 -1.49 1.02 0.14 -1.52 -1.52 -1.52 -1.52 -1.52 -1.52 1.45 1.1 0.89 1.73 -0.24 0.88 0.73 1.27 1.39 1.18 1.29 0.8 0.86 0.98 1.3 1.51 1.25 0.94 0.54 0.74 1.04 -0.48 0.79 1.18 0.56 0.33 0.26 -0.26 -0.03 0.66 -0.03 -1.52 -1.52 2.42 1.74 1.92 2.06 2.12 1.6 1.81 1.96 1.55 1.97 2.48 1.04 1.59 1.95 2.64 2.23 2.08 1.91 1.73 0.75 1.52 1.21 0.82 2.23 2.06 1.04 2.09 -1.52 0.1 0.79 -1.52 -1.52 -1.52 -1.52 1.07 1.23 -1.52 -1.52 -1.52 -0.11 0.68 0.5 1.09 0.01 0.94 0.05 -0.37 -0.44 -1.42 -1.23 -1.23 -1.27 -0.59 -0.83 -0.79 -0.64 0.6 1.05 0.6 0.32 0.15 0.51 0.47 0.75 0.61 -0.18 0.66 0.39 1.17 0.73 -0.6 -0.45 -1.54 -0.2 -0.25 0.18 1.39 -1.35 -1.52 -1.3 -1.3 -1.52 1.28 1.33 0.84 0.19 -0.53 -0.52 -1.34 -1.31 -1.13 -1.05 -1.02 -0.68 -1.52 -1.52 -0.73 -1.52 -1.52 -1.52 -0.95 -0.54 -1.12 At3g01660 259179_at
expressed protein 1

carbon monoxide dehydrogenase pathway




3.59 4.39
At5g13730 0.806 SIGD RNA polymerase sigma subunit SigD (sigD) / sigma-like factor (SIG4) -2.29 -2.29 -2.29 -2.29 -2.29 -2.29 -2.29 -2.29 -2.29 -2.29 0.45 -2.29 -2.29 -2.29 -2.29 -2.29 -2.29 -2.29 -2.29 -2.29 -2.29 -2.29 -2.29 2.68 3.45 -2.29 -2.29 -2.29 -2.29 -2.29 -2.29 1.63 1.64 2.35 2.08 0.42 1.12 1.55 2.35 2.13 2.16 1.71 1.33 1.9 2.5 2.48 2.12 1.49 1.39 1.95 1.27 2.06 -1.1 0.51 2.41 1.77 1.04 1.05 -0.36 0.51 0.21 -0.43 -2.29 -2.29 3.25 3.2 2.63 2.87 2.67 2.02 1.73 2.27 2.31 2.87 3.31 1.75 2.42 2.93 3.41 3.23 2.91 2.49 2.37 1.77 2.19 2.06 1.59 2.46 0.84 -1.03 1.6 -2.29 -0.15 -2.29 -2.29 -2.29 -2.29 -2.29 1.27 2.2 -2.29 -2.29 -2.29 1.35 0.94 0.78 1.62 0.91 1.07 1.48 0.08 -0.13 -0.83 -0.74 -1.12 -1.7 -1.45 -2.02 -2.22 -1.98 1.19 1.72 0.95 0.38 0.56 -0.61 0.92 1.65 1.24 0.6 1.05 0.78 1.93 -0.48 -0.78 -2.31 -2.29 -2.29 -0.35 0.71 2.71 -2.29 -2.29 -2.29 -2.29 -2.29 2.1 0.96 1.92 1.09 0.36 -2.29 -2.29 -2.29 -2.29 -2.29 -2.19 -1.09 -2.06 -0.69 -0.9 -2.29 -0.27 -0.27 -1.18 -0.98 -0.13 At5g13730 250255_at SIGD RNA polymerase sigma subunit SigD (sigD) / sigma-like factor (SIG4) 8 transcription initiation


Transcription (chloroplast)


5.17 5.75
At1g27480 0.804
lecithin:cholesterol acyltransferase family protein / LACT family protein, similar to LCAT-like lysophospholipase (LLPL) (Homo sapiens) -2.14 -2.14 -2.14 -2.14 -2.14 -2.14 -2.14 -2.14 -2.14 -2.14 0.54 0.89 -2.14 -2.14 -2.14 -2.14 -2.14 -2.14 -2.14 -2.14 -2.14 -2.14 -2.14 2.2 1.56 -2.14 -2.14 -2.14 -2.14 -2.14 -2.14 1.7 1.6 1.86 2.36 1.46 1.26 1.43 1.99 2.12 2.27 2 0.92 0.87 2.04 2.37 2.42 1.57 1.38 2.2 2.06 2.11 0.63 0.7 2.29 0.79 1.7 1.42 0.85 0.62 0.8 0.56 -2.14 -2.14 2.83 2.61 2.5 2.62 2.7 2.17 2.41 2.33 2.12 2.31 2.8 1.4 1.01 0.94 1.7 1.65 1.71 2.5 2.43 1.63 2.25 2.13 0.81 1.99 1.02 -0.27 1.51 -2.14 -2.14 -2.14 -2.14 -2.14 -2.14 -2.14 -2.14 1.51 -2.14 -2.14 -2.14 0.61 0.65 0.84 1.45 0.74 1.25 1.13 -0.03 0.04 -2.14 -1.22 -2.14 -2.14 -0.38 -0.85 -0.53 -0.36 1.23 1.52 1.19 0.71 1.15 0.72 1.47 1.18 1.29 0.76 0.82 0.57 1.76 -0.13 0.5 0.12 -1.41 -0.42 0.27 0.66 1.86 -2.14 -2.14 -2.14 -2.14 -2.14 1.59 1.49 1.14 0.94 0.88 -1.32 -1.12 -2.14 -2.14 -2.14 -2.14 -2.14 -2.14 -2.14 -2.14 -2.14 -0.66 -0.66 -2.14 -2.14 -2.14 At1g27480 264442_at
lecithin:cholesterol acyltransferase family protein / LACT family protein, similar to LCAT-like lysophospholipase (LLPL) (Homo sapiens) 2




Synthesis of membrane lipids in endomembrane system

4.56 4.97
At1g56500 0.804
haloacid dehalogenase-like hydrolase family protein -0.59 -1.02 -0.61 -1.12 -1.26 -1.28 -1.49 -1.01 -1.23 -1.08 -0.06 -0.48 -0.92 -0.15 -1.21 -1.15 -0.99 -1.28 -1.04 -1.14 -0.59 -1.49 -0.53 0.56 0.63 -0.85 -1.13 -0.91 -1.13 -0.78 -0.78 0.84 0.44 0.78 0.99 0.3 0.51 0.4 0.7 0.48 0.91 1.11 0.87 0.68 0.71 0.86 1.08 1.07 0.32 -0.15 0.21 1.91 -0.1 -0.62 1.84 0.45 0.48 0.22 0.4 0.43 -0.01 -0.56 -1.44 -1.4 1.81 1.78 1.71 1.61 1.77 1.64 1.6 1.78 1.87 1.82 1.98 1.3 1.97 1.92 2.12 2.12 2.04 1.7 1.67 1.18 1.74 1.68 0.38 1.14 0.98 0.64 1.75 -2.2 -0.76 -0.68 -1.41 -1.93 -0.55 -1.72 0.43 0.59 -1.92 -1.75 -1.72 0.84 0.83 0.71 0.62 0.42 0.42 0.37 -0.21 -0.33 -0.55 -1.01 -0.79 -1.12 -0.56 -1.25 -1.03 -0.98 -0.35 0.27 0.32 0.47 -0.21 0.03 -0.19 0.06 0.42 0.01 -0.06 0.26 1.62 1.21 -0.49 0.45 -1.37 0.3 -0.49 -0.22 1.38 -0.81 -0.98 -1.59 -1.59 -0.11 1.38 0.85 -0.07 0.6 0.26 -0.72 -0.76 -1.55 -1.56 -1.52 -1.05 -0.91 -1.59 -0.94 -1.14 -1.45 -0.95 -0.95 0.02 -0.3 -0.94 At1g56500 259603_at
haloacid dehalogenase-like hydrolase family protein 2

superpathway of serine and glycine biosynthesis II | cysteine biosynthesis II | glycine biosynthesis I | serine biosynthesis | photorespiration




3.41 4.32
At5g14740 0.802 CA2 Encodes a carbonic anhydrase is likely to be localized in the cytoplasm. Expression of its mRNA is seen in etiolated seedlings and points to a possible nonphotosynthetic role for this isoform. -2.6 -0.88 -2.12 -3.99 -2.79 -2.45 -2.33 -2.87 -2.4 -2.78 -3.99 -3.99 -3.99 -3.99 -3.99 -3.99 -3.99 -3.99 -3.99 -3.99 -3.99 -3.99 -3.99 3.48 3.71 -3.99 -3.99 -3.99 -3.99 -3.99 -3.99 3.41 2.78 3.63 3.88 2.84 3.17 3.33 3.18 3.45 3.58 3.38 3.44 3.24 3.12 3.55 3.59 3.65 2.96 3.28 3.37 3.87 -2.11 3.26 4.15 3.63 1.74 1.86 3.41 3.77 0.74 0.47 -3.99 -3.99 3.7 3.3 3.49 3.71 3.9 4.03 3.75 3.7 3.79 3.63 3.57 3.85 3.95 3.57 4.05 4.22 4.19 3.81 3.89 3.8 4.17 4.09 3.55 2.91 2.41 -0.78 3.27 -3.57 1.24 1.39 -3.29 -3.03 -2.5 -2.47 2.16 2.5 -3.65 -3.66 -2.68 3.71 2.37 1.81 2.64 2.38 0.96 2.8 -0.55 -3.02 -1.84 -0.48 -3.47 -4.63 1.23 -3.46 -4.36 -4.9 0.67 2.22 1.48 -0.45 2.33 1.03 2.54 2.23 2.19 1.11 0.91 0.45 2.62 -0.56 -4.04 -3.99 -3.99 -3.99 -4.09 -0.46 3.53 -2.08 -1.67 -3.99 -3.99 -3.99 1.27 -1.78 2.71 1.94 1.11 -3.81 -3.99 -3.99 -4.09 -3.32 -3.99 -3.99 -3.92 -3.55 -3.99 -3.99 2.11 2.11 -3.89 -3.8 -3.99 At5g14740 246596_at CA2 Encodes a carbonic anhydrase is likely to be localized in the cytoplasm. Expression of its mRNA is seen in etiolated seedlings and points to a possible nonphotosynthetic role for this isoform. 6
C-compound and carbohydrate utilization | autotrophic CO2-fixation cyanate degradation Nitrogen metabolism



7.89 9.11
At1g04640 0.799 LIP2 Lipoyltransferase, located in mitochondria but not found in chloroplasts -0.62 -0.91 -1.05 -0.44 -0.45 -0.51 -0.54 -0.85 -0.21 -0.17 -0.68 -0.81 -0.71 -0.65 -0.55 -0.36 -0.34 -0.73 -0.73 -1.39 -2.1 -2.1 -2.1 1.53 2.08 -2.1 -2.1 -2.1 -2.1 -2.1 -2.1 1.34 0.55 1.61 1.31 1.05 0.38 0.7 1.09 1.25 1.23 0.57 0.28 0.71 1.02 1.11 0.79 0.35 0.52 1.24 1 2.19 -0.42 1.09 1.63 0.91 1.2 0.66 0.34 0.61 0.24 0.32 -2.1 -1.03 2.08 2.45 2.31 2.39 2.72 2.64 1.77 2.04 1.93 1.93 1.81 2.09 1.92 2.08 2.19 2.11 2.47 2.24 2.04 1.53 2.18 2.13 0.91 1.74 1.04 -0.62 1.39 -1.1 -2.1 0.08 -2.1 -2.1 -2.1 -2.1 -0.51 0.03 -2.1 -2.1 -2.1 0.73 -0.11 -0.14 0.21 -0.38 0.11 1.22 0.07 -0.68 -0.5 -0.14 -0.54 -0.6 -0.35 -0.65 -0.76 -0.92 -0.39 0.27 -0.14 -0.55 -0.18 -0.14 0.82 -0.18 -0.24 0.09 -0.21 -0.89 0.92 -0.05 -1.23 -2.25 -2.1 -2.1 -0.97 0.01 1.51 -2.1 -1.07 -2.1 -2.1 -2.1 0.28 0.85 0.69 -0.15 -0.31 -2.13 -2.1 -1.79 -1.64 -1.18 0.55 0.23 -0.67 -0.01 0.3 0.1 -1.38 -1.38 0.31 0.5 1.02 At1g04640 264613_at LIP2 Lipoyltransferase, located in mitochondria but not found in chloroplasts 10 lipoic acid metabolism | lipoyltransferase activity



metabolism of acyl-lipids in mitochondria

4.29 4.98
At3g50270 0.797
transferase family protein, similar to anthranilate N-hydroxycinnamoyl/benzoyltransferase, Dianthus caryophyllus -1.55 -1.55 -1.55 -1.55 -1.55 -1.55 -1.55 -1.55 -1.55 -1.55 0.36 -0.28 -1.55 -1.55 -1.55 -1.55 -1.55 -1.55 -1.55 -1.55 -1.55 -1.55 -1.27 2.21 0.42 -1.55 -1.55 -1.55 -1.55 -1.55 -1.55 1.47 1.06 1.97 2.47 0.65 1.59 1.64 1.77 1.59 1.71 1.62 1.88 1.55 1.57 1.63 1.8 1.69 1.77 0.95 1.55 2.18 1.4 0.7 2.41 1.38 1.01 0.59 1.38 1.82 -0.03 -0.04 -1.55 -1.55 1.63 1.46 1.36 1.79 2 1.63 0.92 1.39 2.68 2.46 1.73 1.72 2.5 2.71 2.06 2.27 2.09 1.28 1.69 1.06 1.6 1.45 1.32 1.59 2.06 -0.27 1.85 -1.55 -0.17 -1.55 -1.55 -1.55 -1.55 -1.55 1 1.22 -1.55 -1.55 -1.55 -1.55 -1.55 -1.55 0.04 -1.22 -0.35 1.04 0.01 -0.64 -0.91 -0.21 -0.86 -0.55 -0.63 -0.3 -0.55 -0.19 0.61 0.81 0.69 0.65 0.2 0.43 1.13 0.25 1.22 -0.07 0.76 -0.12 0.87 -0.71 -0.44 -1.55 -1.55 -1.55 0.72 1.08 -0.14 -1.55 -1.55 -1.55 -1.55 -1.55 0.78 1.81 1.37 -1.21 -1.5 -1.55 -1.55 -1.55 -1.55 -1.55 -1.55 -1.55 -1.55 -1.55 -1.55 -1.55 -1 -1 -1.55 -1.55 -1.55 At3g50270 252199_at
transferase family protein, similar to anthranilate N-hydroxycinnamoyl/benzoyltransferase, Dianthus caryophyllus 1
biosynthesis of derivatives of dehydroquinic acid, shikimic acid and chorismic acid




acyltransferase, BAHD family 3.70 4.26
At4g27820 0.796
glycosyl hydrolase family 1 protein; similar to hydroxyisourate hydrolase (Glycine max) -0.97 -2.24 -1.26 -1.96 -1.07 -1.65 -1.96 -1.96 -1.03 -1.96 -0.21 -0.23 -0.89 -0.43 -0.56 -1.2 -1.96 -1.48 -1.96 -1.24 -1.95 -1.96 -0.37 2.16 0.77 -1.96 -1.96 -1.96 -1.7 -1.96 -1.96 2.04 0.89 1.82 2.94 -0.12 0.96 0.96 1.38 1.58 1.64 1.3 0.68 1.57 1.3 1.45 1.44 1.04 0.7 1.39 1.31 1.39 0.04 0.18 1.63 1.51 1.08 0.84 1.22 1.44 0.75 -0.75 -0.28 -0.85 2.1 1.41 1.18 1.27 1.46 0.15 1.68 2.23 2.52 2.79 2.33 0.6 2.69 2.81 2.62 2.1 1.54 2.49 2.82 -0.44 0.26 0.05 0.35 1.79 1.29 1.81 0.41 -2.06 -1.96 -1.96 -1.51 -2.02 0.27 -1.96 0 1.12 -2.24 -2 -1.96 -0.61 -1.46 1.01 1.91 -0.42 2.13 -0.22 -0.35 -0.5 -0.73 -1.71 -2.31 -1.96 0.47 -1.27 -2.04 -2.06 -0.01 0.62 0.03 0.34 1.05 0.49 0.16 1.87 2.02 0 0.51 1.32 1.43 1.2 -1.95 -0.08 0.05 -0.27 -1.03 -0.91 0.53 -1.06 -1.96 -1.96 -1.96 -1.96 1.27 1.23 -1.19 0.26 -0.13 -1.96 -1.99 -1.74 -1.1 -1.66 0.55 0.62 -0.18 0.06 0.44 0.28 -0.84 -0.84 -0.59 -1.05 -1.2 At4g27820 253835_at
glycosyl hydrolase family 1 protein; similar to hydroxyisourate hydrolase (Glycine max) 1
C-compound and carbohydrate metabolism




Glycoside Hydrolase, Family 1 4.28 5.25
At3g52840 0.793
similar to beta-galactosidase (Carica papaya) -1.93 -1.93 -1.93 -1.93 -1.93 -1.93 -1.93 -1.93 -1.93 -1.93 1.47 -1.36 -1.93 -1.57 -1.93 -1.93 -1.93 -1.93 -1.93 -1.93 -1.93 1.19 -1.93 1.62 3.18 -1.93 -1.93 -1.93 -1.93 -1.93 -1.93 1.74 0.74 2.29 2.27 1.46 0.79 1.34 1.2 0.9 0.84 0.95 1.01 1.49 1.08 0.62 0.89 0.85 1.12 1.01 2.39 2.31 2.42 0.83 1.89 1.48 0.61 0.32 -0.09 1.42 -0.87 -0.87 -1.93 -1.93 1.47 1.79 1.84 1.81 2.21 2.45 1.87 1.75 2 2.5 1.76 1.98 1.95 2.23 1.38 2.02 2.33 2 2.31 3.27 2.18 2 1.33 0.94 1.18 0.76 1.29 0.41 0.1 -0.54 -0.45 -1.52 1.21 -1.93 0.19 0.16 -1.3 -1.12 -1.92 1.49 2.38 1.92 0.56 2.4 -0.19 1.7 0.59 -1.54 -0.83 -0.79 -0.95 -2.13 -0.63 -1.6 -1.95 -2.95 -0.86 -0.23 -0.03 -0.03 -0.46 -0.67 -0.2 0.11 1 -0.45 0.19 -0.03 0.69 -1.12 0.73 0.56 -0.67 -0.56 -0.52 -0.56 1.51 -0.7 -0.98 -1.93 -1.93 -1.93 2.27 1.06 0.65 0.78 -0.19 -1.07 -0.63 -1.19 -1.49 -1.93 -1.93 -2.06 -1.93 -1.93 -1.93 -1.93 0.08 0.08 -1.93 -1.93 -1.93 At3g52840 251996_at
similar to beta-galactosidase (Carica papaya) 4
secondary metabolism | metabolismn of primary metabolic sugars derivatives | biosynthesis of glycosides lactose degradation IV Galactose metabolism | Glycerolipid metabolism | Glycan Biosynthesis and Metabolism



4.26 6.22
At2g39470 0.792
photosystem II reaction center PsbP family protein -2.25 -2.86 -2.86 -2.86 -2.86 -2.86 -2.86 -2.86 -2.86 -2.86 -1.7 -2.5 -2.86 -2.86 -2.86 -2.86 -2.86 -2.86 -2.86 -2.86 -2.86 -2.86 -1.86 2.31 2.35 -2.86 -2.45 -2.86 -2.58 -2.9 -2.49 2.31 1.24 2.37 2.97 0.87 1.97 1.88 2.12 2.21 2.21 2.31 1.97 1.96 2.18 2.46 2.19 2.11 1.85 1.21 1.83 2.54 -0.41 1.01 3.4 1.48 0.6 0.4 0.55 1.71 0.07 -0.7 -2.86 -2.86 2.98 2.92 2.79 2.93 3.23 3.22 2.81 3.01 2.88 2.74 3.02 2.96 3.02 2.84 3.22 3.43 3.45 3.42 3.56 1.95 2.77 2.67 1.68 2.57 2.24 -2.72 1.95 -3.09 0.12 1.18 -2.86 -2.86 -1.79 -2.86 0.99 1.85 -2.8 -2.86 -2.86 1.37 0.43 1.69 2.35 0.47 0.53 1.4 0.07 -0.4 -0.52 -0.27 -0.66 -0.83 0.41 -0.56 -0.89 -0.79 0.67 1.41 1.2 0.46 1.25 0.56 1.65 1.65 1.63 0.68 0.88 1.08 2.29 0.11 -0.31 -2.88 -2.18 -3 -0.27 0.69 2.68 -1.32 -1.46 -2.86 -2.86 -2.86 1.42 0.19 1.55 0.67 0.43 -0.73 -1.03 -2.6 -2.36 -2.86 -2.29 -2.61 -2.71 -1.91 -2.48 -2.86 0.01 0.01 -2.86 -2.86 -1.43 At2g39470 266979_at
photosystem II reaction center PsbP family protein 2



Photosystems | additional photosystem II components | psbP family of thylakoid proteins


5.89 6.65
At1g23310 0.791 GGT1 Glutamate:glyoxylate aminotransferase 1 (GGT1). Identified by cloning the gene that corresponded to a purified protein having glyoxylate aminotransferase activity. Localized to the peroxisome and thought to be involved in photorespiration/ metabolic salvage pathway. -1.66 -1.41 -1.42 -1.74 -1.74 -1.79 -2.19 -1.84 -2.02 -2.06 -0.28 -0.57 -1.14 -1.62 -1.83 -2.31 -2.42 -2.47 -2.58 -1.61 -1.9 -2.24 -1.66 1.73 2.06 -2.09 -2.06 -2.02 -2.06 -2.27 -2.08 1.8 1.11 1.94 1.93 0.8 1.28 1.43 1.17 1.25 1.52 1.5 1.66 1.34 1.13 1.51 1.63 1.64 1.4 1.88 1.79 1.99 0.16 2.02 2.35 1.96 0.41 0.53 1.8 1.98 1.01 0.66 -0.79 -1.68 1.75 1.63 1.7 1.98 2.34 2.5 2.37 2.23 2.16 1.83 1.79 2.2 1.99 1.51 1.49 2.29 2.38 2.12 2.22 1.55 2.12 2.2 2.08 1.61 1.65 1.08 2.16 -2.94 0.36 -1.29 -1.59 -1.98 -1.03 -1.88 1.06 1.3 -2.24 -2.2 -1.77 1.49 1.34 1.63 0.61 0.55 1.15 0.61 -0.78 -1.2 -1.03 -0.93 -1.55 -1.27 -0.3 -1.08 -1.42 -1.07 0.24 0.86 0.51 0.57 0.92 0.78 0.95 0.94 1.02 0.33 0.19 0.27 1.61 1.37 -0.62 0.11 -1.99 -0.53 -0.48 0.27 1.47 -2.64 -2.68 -2.63 -2.7 -2.76 1.89 1.73 0.83 1.26 1.39 -1.87 -2.24 -3.02 -2.8 -2.72 -1.03 -1.34 -1.21 -2.04 -1.38 -1.77 -0.94 -0.94 -2.85 -2.8 -1.77 At1g23310 262988_at GGT1 Glutamate:glyoxylate aminotransferase 1 (GGT1). Identified by cloning the gene that corresponded to a purified protein having glyoxylate aminotransferase activity. Localized to the peroxisome and thought to be involved in photorespiration/ metabolic salvage pathway. 9 alanine transaminase activity | glycine transaminase activity | photorespiration
superpathway of serine and glycine biosynthesis II | alanine biosynthesis II | alanine degradation III | photorespiration Carbon fixation | Glutamate metabolism | Alanine and aspartate metabolism



4.87 5.52
At1g62750 0.784
elongation factor Tu family protein -1.48 -2.24 -1.89 -1.8 -1.83 -1.76 -1.7 -1.59 -1.56 -1.8 -1.6 -1.77 -2.42 -2.09 -1.81 -1.24 -1.3 -1.4 -1.57 -1.57 -2.41 -2.02 0.24 2.46 2.34 -2.09 -2.41 -2.41 -2.27 -2.56 -2.5 2.25 0.87 2.45 1.82 0.93 1.42 1.17 1.4 1.55 1.89 1.86 1.58 1.22 1.43 1.8 1.97 1.98 1.02 1.88 2.11 2.06 0.02 -0.04 1.9 0.44 0.67 0.69 0.09 0.26 0.13 -0.36 -1.66 -1.84 2.12 1.9 1.99 1.99 2.25 2.41 2.35 2.46 2.39 2.02 2.11 2.15 2.45 2.11 2.21 2.19 2.37 2.76 2.8 1.38 2.06 1.9 0.95 1.58 1.34 1.08 1.77 -3.52 -0.57 -2.17 -2.94 -3.5 -0.72 -2.04 0.28 0.8 -2.76 -2.21 -2.11 0.88 0.25 -0.09 1.12 0.09 0.08 1.6 0.84 -0.26 -0.3 0.01 -0.22 -0.57 0.16 -0.39 -0.65 -0.57 0.35 0.73 0.87 0.39 0.46 0.47 1.04 0.6 0.88 0.54 0.54 0.79 1.65 0.95 -0.07 0.03 -1.95 -1.05 -0.16 0.49 1.96 -2.31 -2.49 -3.39 -3.39 -3.39 1.01 0.47 0.9 0.9 0.54 -1.18 -1.64 -2.77 -2.76 -3.14 -2.41 -2.54 -0.67 0.91 -2.58 -1.91 -0.49 -0.49 0.39 0.05 0.33 At1g62750 262645_at
elongation factor Tu family protein 2


Translation factors



5.13 6.32
At1g08550 0.783 NPQ1 Violaxanthin deepoxidase involved in xanthophyll cycle.Two major consequences of the npq1 mutation are the absence of zeaxanthin formation in strong light and the partial inhibition of the quenching of singlet excited chlorophylls in the photosystem II li -1.05 -1.76 -1.28 -1.84 -1.39 -1.13 -1.84 -1.04 -1.84 -1.84 -0.04 -1.84 -1.84 -1.84 -1.84 -1.84 -1.84 -1.84 -0.98 -1.84 -1.21 -0.41 -0.87 1.23 1.7 -1.47 -0.78 -1.27 -1.15 -1.29 -1.12 0.53 0.39 0.36 1.91 0.11 -0.03 1.08 1.6 1.12 1.03 0.54 0.54 1.45 1.44 1.39 0.97 0.78 0.26 1.49 1.15 2.08 -1 0.03 1.89 1.51 0.5 0.3 0.31 1.03 0.17 0 -1.96 -1.32 2.22 2.31 2 2.16 2.25 1.72 0.88 0.46 1.41 2.76 2.49 0.64 1.44 2.42 1.88 1.95 1.96 1.52 1.64 1.11 1.87 1.88 0.42 1.36 0.57 -0.18 1.42 -2.09 0.2 -1.84 -1.84 -1.84 -1.84 -1.84 0.71 0.7 -2.04 -2.04 -1.84 1.23 0.13 0.72 1.06 0.16 0.31 0.55 -0.33 -0.62 -0.55 -0.74 -0.94 -1.04 -0.62 -1.26 -0.99 -0.72 0.03 0.65 -0.12 -0.17 0.12 -0.48 0.08 0.55 0.54 0.4 0.25 0.47 1.12 -0.2 -0.78 -0.35 -1.57 -0.8 -0.62 -0.2 1.48 -1.84 -1.69 -1.84 -1.84 -1.84 1.46 0.56 0.33 0.27 0.1 -1.06 -0.59 -0.19 -0.36 -0.37 0.71 0.91 0.14 -0.03 0.47 0.15 -0.04 -0.04 -0.42 -0.47 -0.39 At1g08550 264799_at NPQ1 Violaxanthin deepoxidase involved in xanthophyll cycle.Two major consequences of the npq1 mutation are the absence of zeaxanthin formation in strong light and the partial inhibition of the quenching of singlet excited chlorophylls in the photosystem II li 10 violaxanthin de-epoxidase activity | xanthophyll cycle | xanthophyll metabolism | photosystem II (sensu Viridiplantae)
carotenoid biosynthesis | xanthophyll cycle
Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Carotenoid biosynthesis
Carotenoid and abscisic acid metabolism | carotenid biosynthesis
3.83 4.85
At4g39970 0.782
haloacid dehalogenase-like hydrolase family protein -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.36 1.93 1.84 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 1.75 0.7 1.12 2.52 0.68 0.68 1.1 1.18 0.81 1.3 1.19 1.12 1.23 1.33 1.13 1.12 1.37 1.05 0.78 1.22 1.95 0.34 1.14 1.76 0.34 0.22 0.38 0.25 0.22 -0.36 -1.83 -1.83 -1.83 2.2 2.31 2 2.06 2.15 2 2.02 2.19 2.37 2.62 2.31 2.18 2.49 2.67 2.54 2.36 2.62 2.92 3.05 1.87 2.31 2.18 1.75 1.1 0.81 -0.08 1.38 -1.83 0.19 0.06 -1.83 -1.83 -1.83 -1.83 -0.07 0.74 -1.83 -1.83 -1.83 1.01 0.44 1.01 2.04 0.33 0.73 1.08 -0.06 -0.65 -1.14 -1.64 -1.69 -2.1 0 -1.1 -1.2 -1.3 0.24 0.95 0.88 0.19 1.06 0.8 1.86 1.34 1.66 0.13 0.82 1.03 1.88 0.47 0.95 0.2 -0.65 -0.17 0.18 0.47 1.79 -1.83 -1.83 -1.83 -1.83 -1.83 1.65 0.14 1.23 0.28 0.03 -0.83 -1.35 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.04 -1.83 -1.83 -0.51 -0.51 -1.83 -1.83 -1.67 At4g39970 252876_at
haloacid dehalogenase-like hydrolase family protein 2

superpathway of serine and glycine biosynthesis II | cysteine biosynthesis II | glycine biosynthesis I | serine biosynthesis | photorespiration




4.19 5.14
At5g08410 0.782
similar to ferredoxin-thioredoxin reductase (Zea mays) -1.32 -1.12 -1.3 -0.93 -1.29 -1.37 -1.62 -1.49 -1.53 -1.7 -0.27 -1.34 -1.83 -1.76 -1.8 -1.87 -1.54 -1.59 -1.72 -1.65 -1.77 -0.41 -1.09 1.07 1.29 -1.31 -1.01 -1.01 -1.09 -1.1 -1.21 0.17 0.15 0.5 1.71 -0.5 0.15 0.94 1.33 1.25 0.63 0.43 0.41 1.25 1.32 1.42 1.06 0.5 0.67 1.49 1.57 1.77 -1.02 0.43 1.18 1.25 -0.01 0.13 0.75 0.85 -0.01 0.27 -0.94 -1.57 2.15 1.72 1.82 1.56 1.37 1.07 1.13 0.98 1.29 2.18 2.15 0.99 1.33 2.18 2.2 1.77 1.5 2 1.84 1.12 1.85 1.67 0.72 2.23 1.88 -0.05 1.03 -2.22 -0.06 1.5 -0.94 -1.64 -0.66 -1.36 0.28 1.62 -1.18 -1.47 -1.41 2 0.4 1.38 1.36 0.28 1.08 0.41 -0.62 -1.01 -1.05 -1.09 -1.23 -1.54 -1.03 -1.12 -1.19 -1.55 -0.33 0.13 0.1 -0.04 0.05 -0.23 0.45 0.69 0.36 0.57 -0.23 -0.56 1.3 0.47 -0.22 -0.16 -0.74 -0.33 -0.87 -0.35 1.6 -1.14 -1.32 -0.38 -0.1 0.34 0.67 0.21 0.47 0.81 0.77 -0.49 -0.06 -0.22 -0.21 -0.17 -0.32 -0.61 -0.93 -1.57 -0.45 -1.48 -1.66 -1.66 -1.59 -1.42 -1.61 At5g08410 246007_at
similar to ferredoxin-thioredoxin reductase (Zea mays) 2




Synthesis of fatty acids in plastids

3.54 4.45
At5g09660 0.782
encodes a microbody NAD-dependent malate dehydrogenase -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -1.07 -3.41 2.79 2.91 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 2.75 1.97 2.83 2.75 1.05 2.29 2.38 2.19 2.39 2.56 2.47 2.64 2.42 2.34 2.66 2.65 2.61 2.27 2.11 2.43 3.02 -0.43 2.24 3.33 2.54 1 1 2.24 2.73 0.57 0.2 -3.41 -3.41 3.12 2.85 2.9 2.97 3.16 3 3.24 3.31 3.3 3.05 3.14 2.64 3.05 2.56 2.93 3.13 3.13 3.39 3.45 2.43 3.25 3.29 2.38 2.69 2.72 1.54 3.19 -3.41 1.12 -0.88 -3.41 -3.41 -1.06 -3.41 1.1 1.84 -3.41 -3.41 -3.41 1.83 2.15 2 1.56 1.55 2.02 1.38 -0.12 -0.79 -1.35 -1.05 -1.73 -2.34 0.18 -1.4 -1.99 -1.7 0.79 1.74 1.48 1.33 1.5 1.15 1.47 1.4 1.67 0.76 1.07 0.54 2.85 2.29 -0.89 0.39 -2.5 -0.46 -0.15 0.72 2.65 -3.41 -3.41 -3.41 -3.41 -3.41 2.42 1.6 1.58 2.25 2.16 -2.12 -2.5 -3.41 -3.41 -3.41 -3.41 -3.41 -2.46 -1.29 -3.41 -3.41 -0.8 -0.8 -2 -2.25 -1.27 At5g09660 250498_at
encodes a microbody NAD-dependent malate dehydrogenase 6
C-compound and carbohydrate metabolism | tricarboxylic-acid pathway (citrate cycle, Krebs cycle, TCA cycle) | biogenesis of chloroplast gluconeogenesis | aspartate degradation II | phenylalanine degradation I | serine-isocitrate lyase pathway | formaldehyde assimilation I (serine pathway) | mixed acid fermentation | acetyl-CoA assimilation | glyoxylate cycle | TCA cycle variation VII | TCA cycle variation VIII | TCA cycle variation II | TCA cycle variation IV | TCA cycle -- aerobic respiration Citrate cycle (TCA cycle) | Pyruvate metabolism | Glyoxylate and dicarboxylate metabolism | Carbon fixation | Reductive carboxylate cycle (CO2 fixation) Intermediary Carbon Metabolism | Gluconeogenesis from lipids in seeds


6.59 6.87
At2g42690 0.781
lipase, putative, similar to lipase from Dianthus caryophyllus -1.2 -1.1 -0.62 -0.31 -0.34 -0.66 -1.13 -0.62 -0.65 -0.43 0.52 0.57 -0.43 -0.6 -0.95 -0.97 -0.31 -1.11 -0.88 2.17 1.99 -1.49 -0.66 1.69 0.94 -3.16 -3.16 -3.16 -3.16 -3.16 -3.16 1.83 2.22 2.15 1.68 0.47 2 1.69 1.13 1.51 1.97 2.22 2.36 1.54 1.44 1.67 2.08 2.2 2.16 -0.22 1 2.18 0.64 1.35 2.5 1.12 0.44 -0.22 -0.56 0.57 1.21 0.56 -1.21 -2.2 2.41 2.29 2.04 2.25 2.34 2.39 2.39 2.58 2.73 2.04 2.25 1.79 2.47 1.64 2.2 2.09 2.16 2.56 2.65 1.65 2.22 2.04 1.45 2.1 2.17 1.84 2.52 -1.49 0.04 -0.71 -1.48 -1.54 -0.03 -2.13 -0.17 0.95 -1 -1.17 -2.04 0.23 1.88 1.7 0.44 1.12 1.27 0.66 -0.16 -0.57 -0.7 -0.24 -0.41 -0.61 0.07 -0.4 -0.71 -0.76 0.14 0.24 0.02 0.39 -0.28 0.27 1.11 0.39 0.65 -0.56 -0.15 0.14 -0.14 -0.21 -1.26 -1.81 -2.86 -1.78 0.13 0.59 1.59 -3.16 -3.16 -2.5 -2.5 -3.16 0.84 1.07 1.08 -0.08 -0.79 -3.33 -3.16 -3.16 -3.16 -3.16 -3.16 -3.16 -3.16 -3.16 -3.16 -3.16 -2.47 -2.47 -3.16 -3.16 -3.33 At2g42690 263987_at
lipase, putative, similar to lipase from Dianthus caryophyllus 2

triacylglycerol degradation
Gluconeogenesis from lipids in seeds Lipid signaling

5.55 6.07
At2g29630 0.780
thiamine biosynthesis family protein / thiC family protein -2.42 -2.83 -2.09 -1.84 -1.65 -1.47 -1.58 -1.74 -1.85 -1.61 -0.01 -0.34 -0.69 -0.9 -1.26 -1.45 -1.61 -1.81 -1.25 -0.68 -0.47 -1 -0.33 0.83 0.64 -2.82 -2.99 -2.99 -3.08 -2.54 -2.92 0.7 1.35 -0.38 2.23 -0.21 0.49 1.11 2.11 2.17 1.85 1.46 0.62 1.67 2.35 2.15 2.09 1.66 1.23 -0.39 -0.45 2.6 0.79 0.7 0.84 1.67 1.63 1.34 0.68 0.73 1.91 1.12 -2.59 -1.57 3.01 2.58 2.65 2.68 2.75 2.5 2.42 2.09 1.69 2.84 2.99 2.25 1.33 2.61 3.04 2.81 2.95 2.42 2.35 2.24 2.85 2.76 0.83 3.07 2.21 2.36 1.99 -3.38 0.14 -1.97 -2.2 -2.99 0 -2.99 0.74 2.09 -2.99 -2.99 -3.1 1.89 1.01 2.61 1.81 1.37 1.7 1.18 0.66 0.06 -0.55 -0.64 -0.74 -0.97 -0.39 0.08 -0.11 -0.28 0.08 0.65 0.63 0.71 0.2 -0.3 0.7 1.27 0.71 0.96 0.04 -0.43 1.45 0.84 -0.51 -0.38 -1.82 -0.47 -0.19 0.4 1.85 -1.4 -0.85 -2.99 -2.99 -2.99 1.6 1.24 -0.44 1.17 1.21 -0.04 -0.53 -2.78 -3.07 -2.99 -2.99 -3.31 -2.99 -3.02 -3.41 -3.48 -2.31 -2.31 -2.99 -2.99 -3.01 At2g29630 266673_at
thiamine biosynthesis family protein / thiC family protein 2

thiamine biosynthesis Thiamine metabolism



5.76 6.56
At3g12780 0.780 PGK1 phosphoglycerate kinase, putative -1.36 -1.47 -1.13 -1.01 -0.95 -1.01 -0.79 -0.98 -0.98 -0.93 -1.13 -0.9 -0.97 -0.97 -1.05 -1.03 -1.15 -1.32 -1.35 -1.51 -1.59 -2.66 -1.95 1.64 1.13 -1.73 -2.02 -2.45 -2.56 -2.45 -2.25 1.35 0.63 1.25 1.83 1.05 1.12 1.12 1.17 1.26 1.34 1.13 1.41 1.2 1.11 1.28 1.54 1.61 1.05 0.86 1.25 1.93 0.2 0.06 1.37 0.89 0.65 0.59 0.86 1.12 0.63 0.6 -1.93 -1.02 1.92 1.67 1.78 1.84 1.95 1.8 1.83 1.88 1.95 1.84 1.95 1.9 1.98 2 2.06 2.16 2.17 2.25 2.29 1.88 2.2 2.06 0.9 1.37 1.03 -0.32 1.2 -1.97 -0.1 -0.41 -2.02 -2.41 -1.02 -2.02 -0.16 0.9 -2.12 -1.91 -1.96 1.12 0.62 0.5 1.17 0.84 0.46 0.95 0.28 -0.39 -0.37 -0.19 -0.5 -0.77 -0.03 -0.04 -0.67 -0.71 0.28 0.8 0.61 0.33 0.47 0.34 1.22 0.44 0.75 -0.01 0.35 -0.1 1.44 0.36 0.42 0.11 -1.21 -0.41 -0.26 0.47 1.54 -2.02 -1.56 -3.02 -2.91 -3.51 0.74 -0.02 1.01 0.76 0.57 0.32 -0.1 -1.34 -1.91 -1.88 -1.93 -1.49 -1.49 -1.81 -1.64 -1.88 -0.95 -0.95 -3.05 -2.89 -1.29 At3g12780 256228_at (m) PGK1 phosphoglycerate kinase, putative 4
C-compound and carbohydrate metabolism | glycolysis and gluconeogenesis | photosynthesis gluconeogenesis | glycerol degradation II | Calvin cycle | sorbitol fermentation | fructose degradation (anaerobic) | acetate fermentation | glycolysis I | glyceraldehyde 3-phosphate degradation | glycolysis IV Glycolysis / Gluconeogenesis | Carbon fixation Intermediary Carbon Metabolism


4.41 5.80
At2g15050 0.778
lipid transfer protein, putative, similar to nonspecific lipid-transfer protein A precursor (LTP A) (Wax-associated protein 9A) (Brassica oleracea) -2.66 -2.66 -2.66 -2.66 -2.66 -2.66 -2.66 -2.66 -2.66 -2.66 -2.66 -2.66 -2.66 -2.66 -2.66 -2.66 -2.66 -2.66 -2.66 -2.66 -2.66 -2.66 -2.66 2.82 1.38 -2.66 -2.66 -2.66 -2.66 -2.66 -2.66 2.33 2.5 2.13 2.71 1.47 2.25 2.18 2.29 2.42 2.68 2.4 2.49 2.02 2.25 2.54 2.42 2.27 2.69 1.21 2.58 2.87 3.42 2.74 3.11 2.33 2.24 1.71 0.39 0.4 -0.93 -0.47 -2.66 -2.66 2.49 1.92 2.11 2.66 2.85 2.5 2.16 2.97 2.9 2.82 2.76 1.87 2.56 2.57 2.65 2.4 2.44 -0.42 -0.01 2.04 2 1.81 2 2.4 1.93 1.42 2.94 -2.66 -0.42 0.61 -2.66 -2.66 -2.66 -2.66 1.68 1.56 -2.66 -2.66 -2.66 3.15 3.78 1.53 1.33 2.68 -0.1 1.23 1.35 0.91 0.3 0.5 0.06 0.68 0.16 0.24 0.05 0.53 0.65 0.72 0.44 0.1 -0.15 -0.6 -0.2 0.48 0.54 1.24 0.64 -0.5 1.1 -1.05 -1.47 -1.66 -2.27 -2 -0.33 0.2 3.33 -2.66 -2.66 -2.66 -2.66 -2.66 2.35 0.85 1.63 1.06 0.28 -2.66 -2.66 -2.66 -2.66 -2.66 -2.66 -2.66 -2.66 -1.65 -2.66 -2.66 -1.11 -1.11 -2.66 -2.66 -0.89 At2g15050 265894_at
lipid transfer protein, putative, similar to nonspecific lipid-transfer protein A precursor (LTP A) (Wax-associated protein 9A) (Brassica oleracea) 2




Miscellaneous acyl lipid metabolism

5.52 6.44
At1g73110 0.777
similar to ribulose bisphosphate carboxylase/oxygenase activase, chloroplast precursor (RuBisCO activase, RA) (Oryza sativa) -0.84 -0.84 -0.84 -0.84 -0.84 -1.09 -0.84 -0.84 -0.84 -0.84 0.05 -0.41 -0.99 -1.1 -1.45 -0.84 -0.84 -0.84 -0.49 -0.57 -0.26 -0.84 -0.84 1.6 1.96 -0.84 -0.84 -0.84 -0.84 -0.84 -0.84 1.67 0.57 1.81 0.57 0.92 0.25 -0.84 0.9 0.81 0.93 1.22 0.81 -0.84 0.96 0.79 0.92 1.15 0.59 0.96 0.43 2.14 -0.08 -0.84 1.75 0.39 0.56 0.18 -0.34 0.37 -0.11 0.13 -1 -0.36 1.55 1.95 1.59 1.67 2 2.09 1.8 1.72 1.65 1.13 1.36 1.72 1.83 1.45 1.51 1.92 2.22 2.08 1.51 1.24 1.76 1.66 -0.84 0.39 -0.84 -0.16 1.27 -1.15 -0.84 0.21 -0.84 -0.84 -0.84 -0.84 -0.84 -0.84 -0.84 -0.84 -0.84 -0.84 0.54 -0.56 -0.02 0.72 -0.62 0.88 -0.4 -0.78 -0.7 -0.6 -0.83 -1.36 -0.31 -1.4 -1.25 -1.69 0.11 0.72 0.4 0.01 -0.34 -0.4 0.37 -0.36 0.08 -0.69 0.04 -0.84 1.18 -0.62 -0.46 -1.1 -1.07 -0.84 -0.13 0.28 1.75 -0.84 -0.84 -0.84 -0.84 -0.84 0.84 -0.32 0.77 -0.53 -0.84 -0.84 -0.84 -0.84 -0.84 -0.84 -0.84 -0.84 -0.84 -0.28 -0.84 -0.84 -0.37 -0.37 -0.27 -0.37 -0.25 At1g73110 262377_at
similar to ribulose bisphosphate carboxylase/oxygenase activase, chloroplast precursor (RuBisCO activase, RA) (Oryza sativa) 4



Intermediary Carbon Metabolism


2.90 3.91
At3g18890 0.776
similar to UV-B and ozone similarly regulated protein 1 UOS1 (Pisum sativum) -0.88 -2.21 -2.21 -2.21 -2.21 -2.21 -2.21 -2.21 -2.21 -2.21 0.04 -1.39 -2.21 -2.21 -1.01 -2.21 -2.21 -0.76 -0.19 -2.21 -0.61 -2.21 -1.88 2.08 1.21 -2.21 -2.21 -2.21 -2.21 -2.21 -2.21 1.09 0.27 1.31 1.85 1.01 1.58 1.83 1.88 1.64 1.33 1.64 1.97 2.04 1.91 1.65 1.65 1.84 1.25 0.03 1.08 2.62 0.05 -1.14 3.09 1.49 0.89 1.08 1.24 1.61 0.8 0.45 -1.74 -1.14 2.43 2.04 2.12 1.84 1.72 1.95 1.83 2.1 2.42 2.44 2.43 1.57 2.59 2.67 2.65 1.92 1.84 2.78 2.65 1.92 2.62 2.27 1.25 1.36 1.34 -1.17 0.84 -2.33 0.38 -2.21 -2.21 -2.21 -0.23 -2.21 0.57 1.71 -2.21 -2.21 -2.21 1.85 0.34 -0.1 1.81 0.35 -0.14 1.47 0.38 -0.27 -0.05 0.4 -0.36 -0.24 0.49 -0.02 -0.26 -0.1 0.72 0.92 0.82 0.08 1.05 0.67 1.84 0.83 0.77 0.82 0.9 0.91 1.6 -1.01 0.13 -1.27 -1.59 -1.7 0.1 0.61 2.42 -2.21 -1.83 -2.21 -2.21 -2.21 0.72 -1.19 1.21 0.47 0.11 -0.55 -1.59 -2.21 -2.21 -2.21 -2.21 -2.21 -2.21 -2.21 -2.21 -2.21 -1.33 -1.33 -2.21 -2.21 -2.06 At3g18890 256655_at
similar to UV-B and ozone similarly regulated protein 1 UOS1 (Pisum sativum) 4



Chloroplastic protein import via envelope membrane | Tic apparatus


4.65 5.42
At1g21130 0.775
O-methyltransferase, putative -2.11 -2.11 -2.11 -2.11 -2.11 -2.11 -2.11 -2.11 -2.11 -2.11 -2.11 -2.11 -2.11 -2.11 -2.11 -2.11 -2.11 -2.11 -2.11 -2.11 -2.11 -2.11 -2.11 2.39 4.5 -0.84 1.03 1.14 0.7 -0.4 -0.8 0.8 3.27 2.25 1.63 1.42 2.06 3 3.33 2.29 1.89 1.31 2.04 2.95 3.16 2.42 1.51 1.3 2.86 3.25 3.12 3.76 2.93 1.42 2.27 4.41 2.88 2.24 3.38 4.88 3.31 2.31 1.23 -0.83 3.34 4.17 4.26 3.43 2.84 2.27 2.41 2.24 3.24 4.18 2.84 2.06 2.04 3.02 1.81 2.41 2.43 -2.11 -2.11 2.85 3.49 3.34 -0.02 3.44 3.85 3.43 3.46 -1.86 1.22 1.11 -2.11 -0.43 0.53 -2.11 2.12 1.99 -0.88 -0.88 -2.11 -2.11 1.04 1.34 -2.11 -1.15 -0.52 1.66 0.56 -2.11 -1.57 -1.79 -1.97 -2.11 -2.11 -2.11 -2.11 -2.11 -2.11 -2.11 -2.11 -1.48 -2.11 -2.11 -2.11 -0.77 -0.9 -2.11 -2.11 -2.11 -1.72 -0.19 -2.11 -2.11 -2.11 -2.11 -2.11 -2.11 -2.11 -2.11 -2.11 -2.11 -2.11 -2.11 -1.52 1.81 -2.11 -2.11 -2.11 -2.11 -2.11 -2.11 -2.11 -2.11 -1.43 -2.11 -2.11 -2.11 -2.11 -2.11 -0.42 -0.42 -2.11 -2.11 -2.11 At1g21130 261453_at
O-methyltransferase, putative 2



Phenylpropanoid Metabolism | core phenylpropanoid metabolism
Phenylpropanoid pathway Methyltransferase, COMT like 5.59 7.00
At5g23120 0.775 HCF136 encodes a stability and/or assembly factor of photosystem II -1.18 -1.6 -1.58 -1.15 -1.5 -1.71 -2.68 -1.45 -1.52 -1.22 -0.93 -1.58 -1.12 -0.93 -1.48 -1.09 -1.05 -1.37 -1.43 -1.13 -1.38 -1.57 -0.02 2.38 2.5 -2.21 -2.04 -2.52 -2.27 -1.84 -1.71 2.09 0.66 2.02 1.94 0.71 1.03 1.03 1.17 1.42 1.45 1.29 1.2 1.12 1.32 1.6 1.5 1.29 0.84 1.97 1.91 2.17 0.05 0.69 1.86 1.18 -0.16 -0.22 0.84 1.21 -0.87 -1.09 -2.98 -2.56 2 2 1.96 2.13 2.24 2.24 2.16 2.1 2.17 1.98 2.04 2.27 2.27 2.23 2.27 2.25 2.52 2.59 2.63 1.7 2.2 2.18 1.02 0.8 0.76 -0.3 1.57 -3.17 -0.07 0.23 -2.34 -3.09 -1.39 -2.45 0.18 0.67 -2.06 -2.16 -2.24 0.95 1.11 0.35 0.93 0.98 0.19 1.08 0.09 -0.37 -0.6 -0.33 -0.5 -0.57 0.06 -0.16 -0.31 -0.22 0.44 1.01 0.88 0.64 0.62 0.36 0.85 0.75 0.77 -0.05 0.54 0.17 1.9 0.94 0.12 0.59 -1.71 -0.07 -0.06 0.37 2.04 -1.8 -2.29 -2.65 -2.65 -2.68 1.27 0.41 1.13 0.82 0.59 -1.36 -1.71 -2.27 -2.54 -3.04 -2.09 -2.11 -1.56 -0.54 -2.02 -2.83 -1.18 -1.18 -1.69 -1.85 -1.31 At5g23120 249875_at HCF136 encodes a stability and/or assembly factor of photosystem II 10 protein binding | plastid organization and biogenesis | protein complex assembly


Thylakoid biogenesis and photosystem assembly


4.87 5.81
At4g26530 0.774
strong similarity to Fructose-bisphosphate aldolase, cytoplasmic isozyme (Arabidopsis thaliana) -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 4.7 4.55 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 1.66 2.78 4 4.23 -3.12 0.63 3.33 3.85 3.38 2.82 1.47 2.83 3.89 3.88 3.61 2.89 2.1 1.96 4.12 2.7 4.07 -3.12 0.83 5.21 4.55 1.01 1.29 3.23 3.86 -3.12 -3.12 -3.12 -3.12 4.25 4.34 4.21 4.63 4.79 3.66 2.67 3.73 4.54 5.08 4.17 1.96 4.28 4.51 3.73 4.33 4.2 3.16 3.87 2.54 4.04 3.83 2.81 3.84 2.25 -3.12 3.33 -3.12 0.71 0.28 -3.12 -3.12 -3.12 -3.12 1.76 3.47 -3.12 -3.12 -3.12 3.28 1.3 -0.8 3.17 2.27 0.42 1.52 -3.12 -3.12 -1.68 -3.12 -3.12 -3.12 -2.29 -3.12 -3.12 -3.12 1.11 2.71 2.06 1.26 1.62 0.72 0.28 2.43 2.39 1.96 2.11 0.07 4.12 1.37 -3.12 -3.12 -3.12 -3.12 -3.12 1.03 4.72 -3.12 -3.12 -3.12 -3.12 -3.12 2.99 0.46 1.5 3.69 3.11 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 At4g26530 253966_at (m)
strong similarity to Fructose-bisphosphate aldolase, cytoplasmic isozyme (Arabidopsis thaliana) 6
C-compound and carbohydrate metabolism | glycolysis and gluconeogenesis | pentose-phosphate pathway Calvin cycle | mannitol degradation | sorbitol fermentation | sorbitol degradation | fructose degradation (anaerobic) | acetate fermentation | glycolysis I | glycolysis IV Glycolysis / Gluconeogenesis | Pentose phosphate pathway | Fructose and mannose metabolism | Carbon fixation Intermediary Carbon Metabolism | Gluconeogenesis from lipids in seeds


7.65 8.32
At1g19150 0.772 LHCA2*1 PSI type II chlorophyll a/b-binding protein (Lhca2*1) -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 4.18 3.59 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 3 1.82 3.79 3.53 1.36 3.38 3.59 3.18 3.58 3.53 3.59 3.7 3.56 3.5 3.53 3.68 3.65 3.34 2.25 3.21 3.67 -1.68 0.36 4.44 1.88 1.52 1.24 1.21 1.9 -0.57 -0.6 -3.7 -3.7 3.84 3.54 3.52 3.57 3.73 3.58 3.58 3.69 3.91 3.73 3.73 3.3 3.89 3.58 3.78 3.39 3.84 4.05 4.03 2.83 3.93 3.74 2.06 3.15 2.81 -3.7 2.44 -3.7 0.23 1.51 -3.7 -3.7 -3.7 -3.7 0.99 2.61 -3.7 -3.7 -3.7 2.25 1.34 0.7 2.63 1.69 0.64 2.25 0.36 -0.06 -0.43 0.44 -0.41 -0.52 1.11 0.35 -0.06 0.06 1.65 2.23 1.77 1.02 1.78 1.2 2.42 1.89 2.08 0.85 1.41 0.53 3.14 -0.72 -0.2 -2.27 -3.7 -3.7 0.32 1.53 3.6 -3.7 -3.7 -3.7 -3.7 -3.7 1.22 -1.7 2.7 2.27 1.51 -2.74 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -0.76 -0.76 -3.7 -3.7 -2.77 At1g19150 256015_at LHCA2*1 PSI type II chlorophyll a/b-binding protein (Lhca2*1) 10



Photosystems | Chlorophyll a/b binding proteins | light harvesting complex


7.52 8.14
At5g57040 0.770
lactoylglutathione lyase family protein / glyoxalase I family protein -1.53 -2.92 -1.35 -1.93 -2.1 -2.34 -2.12 -3.27 -2.37 -1.98 -0.32 -1.75 -2.04 -2.92 -2.92 -2.92 -2.92 -3.13 -2.92 -2.62 -1.72 0.09 -2.59 2.15 2.19 -1.71 -1.62 -1.83 -1.64 -2.92 -2.34 1.45 0.52 1.84 1.85 0.44 1.75 1.97 1.37 1.37 1.44 1.88 1.92 1.88 1.37 1.51 1.68 1.83 1.97 1.01 1.22 2.41 0.08 2.06 3.12 1.97 0.53 0.69 1.65 1.98 0.75 0.7 0.03 -1.13 1.57 1.41 1.36 1.19 1.37 1.79 2.16 2.29 2.44 2.4 1.97 1.33 2.12 1.94 1.29 0.95 1.42 2.49 2.44 1.04 1.76 1.9 1.46 2.16 2.31 1.25 2.14 -1.77 -1.19 0.25 -1.54 -1.64 -0.2 -2.92 0.41 0.86 -1.06 -0.76 -2.61 1.09 1.14 1.34 0.37 0.92 1.86 -0.33 -1.2 -2.04 -1.26 -1.32 -1.75 -1.83 -0.53 -1.22 -1.91 -1.97 -1.1 0.1 0.09 0.78 0.4 0.44 0.5 0.31 0.65 0.13 -0.04 -0.5 2.19 2.1 -1.45 0.81 -0.35 0.28 -0.97 -0.38 1.13 -2.92 -2.92 -1.09 -1.83 -2.92 1.26 1.1 0.49 1.35 1.21 -1.18 -0.62 0.12 0.43 0.39 -0.15 -0.47 -0.52 -1.39 -0.03 -1.24 -2.06 -2.06 -1.38 -1.43 -1.31 At5g57040 247931_at
lactoylglutathione lyase family protein / glyoxalase I family protein 2

threonine degradation | methylglyoxal degradation




5.11 6.40
At1g66970 0.769
glycerophosphoryl diester phosphodiesterase family protein, -2.65 -2.65 -2.65 -2.65 -2.65 -2.65 -2.65 -2.65 -2.65 -2.65 -0.71 -2.65 -2.65 -2.65 -2.65 -2.06 -2.65 -2.65 -2.65 -2.65 -2.65 -2.65 -1.5 0.76 0.14 -2.65 -2.65 -2.65 -2.65 -2.65 -3.4 2.02 1.87 1.07 2 1.18 1.34 1.07 1.13 1.28 1.51 1.42 1.43 1.27 0.96 1.36 1.35 1.46 1.31 -0.15 0.71 2.83 1.04 0.69 2.31 1.39 1.62 1.14 1.07 1.9 3.21 2.52 1.81 -1.28 3.6 3.23 3.32 3.12 3.26 3.14 2.96 2.97 3.22 3.04 3.48 2.29 2.37 2.65 3.16 2.82 2.67 1.28 1.3 2.65 3.06 3.06 2.62 3.34 3.25 2.04 2.77 -3.44 -2.65 -2.65 -2.65 -2.48 0.02 -2.36 0.62 1.19 -3.47 -2.96 -2.45 1.33 1.9 3.37 1.83 1.92 -0.14 0.83 -0.16 -0.87 0.79 0.75 0.46 0.56 1.07 0.86 0.76 0.7 0.07 0.73 0.68 0.77 1.13 0.85 0.95 1.67 2 0.13 0.24 -0.12 1.78 1.79 -0.1 -1.15 -2.4 -1.26 -1.73 -1.06 2.23 -2.65 -2.65 -2.65 -2.65 -2.65 1.93 3.49 0.35 0.63 0.46 -3.08 -2.65 -2.65 -2.65 -2.65 -2.65 -2.65 -2.65 -2.65 -2.65 -2.65 -2.65 -2.65 -2.65 -2.65 -2.65 At1g66970 255852_at
glycerophosphoryl diester phosphodiesterase family protein, 2

glycerol metabolism




5.88 7.07
At4g11175 0.769
translation initiation factor IF-1, chloroplast, putative -1.15 -1.26 -1.46 -1.32 -1.19 -1.02 -1.25 -1.41 -1.65 -1.41 -0.2 -0.93 -0.95 -0.95 -0.7 -0.52 -1.07 -0.86 -1.38 -0.94 -1.35 -0.75 -0.86 2.16 1.32 -2 -2.24 -1.8 -2.25 -1.8 -2.39 1.41 -0.36 1.89 1.6 0.47 0.64 0.37 0.8 0.99 1.02 0.72 0.23 0.55 0.87 0.97 0.8 0.74 0.43 1.46 1.5 1.22 -0.85 0.33 1.09 0.03 0.6 0.57 -0.28 -0.21 -0.78 -0.43 -0.83 -1.38 1.71 1.58 1.47 1.42 1.48 1.15 1.42 1.81 1.94 1.54 1.6 1.61 2.62 2.43 2.56 2.52 2.15 2.78 2.61 0.91 1.4 1.12 0.72 1.05 0.86 -0.59 0.38 -1.77 -1.25 -0.63 -1.12 -1.59 -1.8 -1.71 0.21 0.36 -1.34 -1.57 -1.77 0.33 -0.69 -0.78 0.66 -0.56 0.37 1.38 0.7 -0.02 -0.46 -0.36 -0.32 -0.82 0.02 -0.43 -0.44 -0.57 0.12 0.21 -0.02 -0.25 0.34 0.8 1.53 0.35 0.64 0.79 0.22 1.09 0.98 0.18 -0.53 -0.42 -2.22 -1.05 -0.31 0.1 0.99 -0.49 -1.01 -1.8 -1.8 -1.8 0.49 0.43 0.91 0.15 0.16 -0.47 -0.63 -0.12 -0.22 -0.42 -1.46 -1.75 -0.32 0.88 -1.18 -1.15 -1.2 -1.2 0.43 0.92 0.26 At4g11175 254910_at
translation initiation factor IF-1, chloroplast, putative 4


Translation factors Translation (chloroplast)


3.72 5.18
At3g54050 0.767
strong similarity to fructose-1,6-bisphosphatase (Brassica napus) -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -0.12 -1.91 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -1.63 -1.81 -3.7 -1.77 3.04 2.65 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 2.18 1.74 2.5 2.74 1.48 2.25 2.45 2.25 2.58 2.42 2.31 2.58 2.47 2.49 2.6 2.64 2.54 2.45 1.67 2.17 3.08 0.05 0.39 3.28 1.95 1.42 1.25 1.69 2.09 0.84 0.6 -3.7 -2.92 3.31 2.87 3.03 3.14 3.24 3.16 3.17 3.2 3.34 3.2 3.25 2.98 3.43 3.42 3.49 3.24 3.38 3.32 3.33 2.47 3.19 3.05 1.05 2.37 2.12 1.22 2.63 -3.7 1.35 -0.68 -3.7 -3.7 -0.46 -3.7 0.95 1.73 -3.7 -3.7 -3.7 2.37 1.7 1.08 1.87 1.48 1.15 1.92 0.43 -0.84 -0.85 -0.35 -1.19 -1.73 -0.25 -1.86 -2.87 -2.74 0.96 1.74 1.59 1.17 1.3 1.08 2.02 0.96 1 1.12 1.34 -0.3 2.8 1.19 0.75 0.48 -1.73 -0.24 0.04 1.38 3.01 -3.7 -3.7 -3.7 -3.7 -3.7 1.52 0.63 2.21 1.8 1.49 -0.18 -0.75 -3.7 -3.7 -3.7 -0.2 -0.47 -3.7 -3.7 -0.53 -1.68 -0.92 -0.92 -3.7 -3.7 -1.54 At3g54050 251885_at
strong similarity to fructose-1,6-bisphosphatase (Brassica napus) 10
C-compound and carbohydrate metabolism | glycolysis and gluconeogenesis | photosynthesis | biogenesis of chloroplast gluconeogenesis | Calvin cycle Glycolysis / Gluconeogenesis | Pentose phosphate pathway | Fructose and mannose metabolism | Carbon fixation Intermediary Carbon Metabolism


6.97 7.19
At3g63140 0.767
similar to mRNA binding protein precursor (Lycopersicon esculentum) -1.94 -2.49 -2.74 -4.46 -2.04 -2.24 -2.48 -2.34 -1.79 -2.59 -0.85 -0.33 -2.02 -2.27 -2.61 -3.38 -4.46 -3.32 -2.49 -1.04 -1.93 -4.46 -1.7 3.41 3.1 -4.46 -4.46 -4.46 -4.46 -4.46 -4.46 2.8 1.21 2.85 3.06 1.61 2.56 2.56 2.54 2.5 2.6 2.8 2.82 2.75 2.59 2.58 2.94 3.03 2.33 1.55 2.41 3.69 0.74 0.05 3.84 2.54 1.99 1.79 2.31 2.81 0.78 0.4 -4.46 -4.46 3.47 3.15 3.28 3.28 3.54 3.49 3.33 3.45 3.49 3.45 3.39 3.66 3.83 3.81 3.93 3.93 4.05 3.9 3.88 3.11 3.82 3.68 2.11 2.4 2.31 -0.13 2.7 -4.46 0.54 0.16 -4.46 -4.46 -0.96 -4.46 0.59 2.08 -4.46 -4.46 -4.46 2.48 1.77 1.61 2.75 1.85 0.56 2.06 0.35 -0.39 -0.5 -0.16 -1.35 -1.37 0.64 -0.65 -1.45 -0.84 1.51 2.37 1.91 1.33 1.82 1.58 2.71 1.56 1.87 1.13 1.5 0.75 3.09 1.36 0.42 0.41 -1.91 -0.69 0.66 1.57 3.51 -4.46 -3.3 -4.46 -4.46 -4.46 1.93 -0.05 2.5 1.63 0.91 -3.55 -4.46 -4.46 -4.46 -4.46 -4.46 -4.46 -4.46 -4.46 -4.46 -4.46 -2.7 -2.7 -4.46 -4.46 -4.46 At3g63140 251157_at
similar to mRNA binding protein precursor (Lycopersicon esculentum) 2
biogenesis of chloroplast colanic acid building blocks biosynthesis | dTDP-rhamnose biosynthesis | galactose degradation I | UDP-glucose conversion | lactose degradation IV




8.24 8.51
At2g01110 0.766 APG2 thylakoid membrane formation protein / cpTatC (APG2); mutant is Albino and pale green; Chloroplast Protein Translocation (tatC) -0.89 -0.69 -0.88 -0.98 -1.02 -1.13 -1.1 -1.01 -1.1 -1.07 -0.93 -1.07 -1.17 -0.99 -1.14 -1.37 -1.3 -1.3 -1.35 -1.3 -1.09 -0.73 -0.88 2.11 1.87 -1.38 -0.95 -1.21 -1.19 -1.12 -1.29 0.72 -0.17 1.11 1.06 0.06 0.46 0.9 0.93 1.03 0.92 0.69 1 1.13 1.09 1.07 0.93 0.85 0.82 1.42 1.33 1.97 -0.57 -0.37 1.51 0.8 0.55 0.28 0.13 0.6 -0.1 -0.24 -0.62 -1.03 1.37 1.12 1.22 1.58 1.58 1.32 1.37 1.5 1.51 1.56 1.53 1.24 1.46 1.45 1.5 1.31 1.47 1.69 1.62 0.75 1.85 1.61 0.34 0.3 -0.24 0.77 1.39 -2.22 0.28 0.15 -1.54 -1.58 -1.3 -1.3 -0.25 0.2 -1.84 -2.6 -1.55 -0.07 0.17 -0.35 0.05 0.2 0.6 0.85 0.02 -0.52 -0.55 -0.41 -0.69 -0.67 -0.3 -0.86 -1.04 -0.93 -0.04 0.35 0.26 0.39 -0.12 0.03 0.01 -0.11 -0.19 -0.77 0.18 -0.45 1.32 1.09 -0.37 0.62 -1.53 -0.42 -0.67 0.01 1.05 -1.3 -1.3 -1.3 -1.3 -1.3 0.18 -0.09 0.35 0.86 0.68 -0.64 -0.76 -1.32 -0.93 -0.93 0.04 0.18 -0.28 -0.87 0.19 0.2 -0.76 -0.76 0.69 0.62 0.45 At2g01110 262202_at APG2 thylakoid membrane formation protein / cpTatC (APG2); mutant is Albino and pale green; Chloroplast Protein Translocation (tatC) 10 thylakoid membrane organization and biogenesis

Folding, Sorting and Degradation | Protein export Pathway for nuclear-encoded, thylakoid-localized proteins | Delta-pH pathway


2.93 4.71
At4g32260 0.766
ATP synthase family -2.02 -2.21 -1.55 -1.93 -1.81 -1.8 -1.95 -1.99 -2.34 -1.95 -0.63 -1.12 -1.82 -1.9 -2.06 -1.85 -2.09 -2.33 -2.41 -1.47 -2.2 -2.44 -1.75 1.81 1.76 -2.49 -2.68 -3.09 -3 -2.79 -3 1.37 0.79 1.73 1.79 1.02 1.31 1.61 1.4 1.56 1.61 1.41 1.66 1.61 1.47 1.42 1.71 1.64 1.39 1.37 1.49 1.96 -0.05 0.77 2.15 1.5 1.07 1.11 1.29 1.81 0.85 0.87 -1.84 -1.1 1.88 1.61 1.59 1.83 1.92 2 1.94 1.9 1.92 1.85 1.84 1.76 1.93 1.75 1.89 1.93 2.06 1.99 2.02 1.52 2.06 1.96 1.53 1.3 1.12 0.14 1.72 -3.25 0 0.94 -2.12 -2.94 -0.49 -2.23 0.14 0.94 -3.12 -2.66 -2.29 1.95 1.19 1.04 1.08 0.67 0.81 0.9 -0.03 -0.57 -0.37 -0.01 -0.6 -0.43 0.25 -0.34 -0.36 -0.39 0.15 0.75 0.64 0.32 0.91 0.84 1.36 0.67 0.75 0.94 0.46 0.04 1.63 1.02 0.05 -0.01 -1.72 -0.55 -0.32 0.28 1.6 -2.82 -2.57 -2.77 -2.92 -3.43 1.25 0.55 0.85 1.01 0.94 0.19 0.07 -1.27 -1.35 -1.7 -0.82 -1.12 -1.02 -1.77 -1.32 -1.39 -0.73 -0.73 -1.83 -1.99 -0.45 At4g32260 253420_at
ATP synthase family 6
photosynthesis

Photosystems | additional photosystem II components | ATP synthase components


4.75 5.58
At5g04140 0.763 GLU1 encodes a gene whose sequence is similar to ferredoxin dependent glutamate synthase (Fd-GOGAT). Expression in leaves is induced by light and sucrose. Proposed to be involved in photorespiration and nitrogen assimilation. -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 2.98 3.2 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 3.16 2.14 2.95 3.21 1.87 2.47 2.1 2.31 2.31 2.98 2.96 2.67 2.25 1.97 2.8 3.11 3.1 1.84 2.15 2.69 3.38 0.74 0.06 3.59 2 1.9 2.16 1.49 2.34 2.42 1.79 -0.88 -1.98 3.14 3.23 3.14 3.2 3.46 3.54 3.55 3.66 3.55 3.08 3.41 3.27 3.52 2.95 2.99 3.49 3.69 3.87 3.84 2.89 3.63 3.56 2.24 1.5 1.29 1.3 3.3 -3.71 0.56 -2.17 -3.71 -3.71 -3.71 -3.71 0.42 0.94 -3.71 -3.71 -3.71 2.91 2.22 1.68 1.65 2.06 1.3 1.85 0.64 -0.03 -0.14 0.15 -0.43 -0.26 0.91 0.37 -0.11 0.01 0.99 1.98 1.68 1.6 1.54 1.7 2.02 1.48 1.7 1.57 1.2 1.47 3.22 2.69 -0.19 0.19 -3.27 -1.8 -0.07 1.01 2.82 -3.71 -3.71 -3.71 -3.71 -3.71 2.71 2.21 1.56 2.02 1.75 -2.12 -2.5 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -2.04 -2.04 -3.71 -3.71 -3.71 At5g04140 245701_at GLU1 encodes a gene whose sequence is similar to ferredoxin dependent glutamate synthase (Fd-GOGAT). Expression in leaves is induced by light and sucrose. Proposed to be involved in photorespiration and nitrogen assimilation. 4 photorespiration amino acid metabolism | assimilation of ammonia, metabolism of the glutamate group | nitrogen and sulfur utilization
Nitrogen metabolism



7.25 7.58
At1g63970 0.761 ISPF similar to 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase from Catharanthus roseus -0.76 -1.21 -0.67 -0.63 -0.85 -0.79 -0.75 -0.7 -0.71 -1 -0.67 -0.74 -0.81 -0.84 -0.64 -0.75 -0.47 -0.85 -0.89 -1.05 -0.97 -1.4 -0.77 1.11 0.53 -1.03 -1.02 -1.05 -1.1 -1.12 -1.12 0.48 -0.26 0.57 0.97 0.59 0.62 0.83 0.46 0.75 0.74 0.61 0.95 0.76 0.56 0.63 0.87 0.87 0.8 0.69 0.68 1.39 -0.27 0.2 1.23 0.34 0.57 0.79 0.25 0.65 0.56 0.78 0.22 -0.62 1.14 0.85 0.86 0.81 0.85 0.78 0.98 0.99 1.1 1.27 1.11 0.64 1.01 1.1 1.34 0.94 0.84 1.5 1.37 0.71 1.26 1.23 -0.26 1.18 1.15 0.52 1.26 -1.75 -0.45 0.3 -1.24 -1.78 -1.12 -1.76 -0.5 -0.13 -1.38 -1.53 -1.68 -0.2 -0.08 0.14 0.24 -0.15 0.59 0.59 0.2 -0.46 -0.28 -0.13 -0.62 -0.68 0.1 -0.09 -0.44 -0.53 -0.24 0.08 0.09 0.24 0 0.32 0.37 -0.08 0.15 -0.59 -0.27 -0.59 1.07 1.33 0.23 0.28 -0.64 -0.07 -0.61 -0.2 0.86 -0.63 -0.67 -1.5 -1.5 -1.5 0.1 0.44 0.11 0.39 0.42 -0.56 -0.5 -0.49 -0.64 -0.36 0.05 0.02 -0.17 -0.09 0.3 0.65 -1.43 -1.43 -0.12 -0.07 0.14 At1g63970 260324_at ISPF similar to 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase from Catharanthus roseus 4

isopentenyl diphosphate biosynthesis -- mevalonate-independent
Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Biosynthesis of prenyl diphosphates
IPP (isopentenyl diphosphate) and DMAPP (dimethylallyl diphosphat) biosynthesis | MEP (methylerythritol P) pathway, plastids
2.66 3.28
At3g56650 0.760
thylakoid lumenal 20 kDa protein -1.23 -1.76 -1.43 -1.43 -1.34 -1.49 -1.43 -1.43 -1.43 -1.65 -0.06 -1.78 -1.43 -1.43 -1.43 -1.43 -1.43 -1.33 -1.43 -1.43 -1.43 -1.2 -1.43 1.77 1.94 -1.43 -1.43 -1.43 -1.43 -1.43 -1.43 1.01 0.13 1.25 1.89 -0.42 0.73 0.9 1.12 1.07 0.88 0.78 1.11 1.3 1.11 1.03 0.79 1.01 0.7 0.84 1.39 1.66 -0.4 0.28 1.79 0.69 -1.17 -0.83 -0.1 0.43 -0.93 -0.99 -1.43 -2.1 1.58 1.74 1.79 1.72 1.82 1.86 1.69 1.57 1.65 1.64 1.56 1.71 1.96 2.14 2.08 2.19 2.27 2.34 2.46 1.49 1.96 1.87 0.61 0.99 1.01 -0.64 1.23 -1.6 0.34 0.26 -1.43 -1.43 -1.43 -1.43 0.56 1.25 -1.43 -1.43 -1.43 0.37 0.19 0.47 1.25 0.13 -0.64 1.41 0.48 0.13 -0.14 -0.02 -0.05 -0.21 0.08 -0.11 -0.08 -0.15 0.64 0.84 0.39 0.11 0.63 0.24 0.72 0.7 0.67 -0.05 0.41 0.15 1.12 -0.68 -0.17 -0.35 -1.63 -0.63 -0.39 0.14 1.53 -1.43 -1.43 -1.43 -1.43 -1.43 0.63 0.53 1.03 0.14 -0.05 -0.73 -1.01 -1.13 -1.12 -1.23 -1.42 -1.43 -1.07 -0.37 -1.66 -2.02 -0.45 -0.45 -1.05 -0.73 -0.49 At3g56650 251701_at
thylakoid lumenal 20 kDa protein 6



Photosystems | additional photosystem II components | psbP family of thylakoid proteins


3.39 4.55
At4g09650 0.759
similar to ATP synthase delta chain, chloroplast precursor (Nicotiana tabacum) -3.12 -3.56 -2.8 -2.71 -2.49 -2.74 -2.85 -2.45 -2.86 -2.65 -1.37 -3.13 -3.2 -2.68 -2.5 -2.52 -2.27 -2.78 -3.25 -3.45 -4.34 -3.18 -1.85 2.73 2.27 -3.09 -3.46 -4.08 -3.5 -3.82 -3.92 2.31 0.7 2.68 2.87 1.89 2.16 2.15 1.91 2 2.04 2.13 2.4 2.29 2.13 2 2.02 2.19 2 1.72 2.48 2.91 0.41 0.52 2.95 1.67 0.86 0.64 0.95 1.51 0.09 0.65 -2.74 -2.04 2.85 2.27 2.47 2.52 2.73 2.68 2.8 2.89 3.15 3.01 2.64 2.37 3.17 2.94 2.78 2.59 2.77 3.19 3.23 2.52 3.1 2.96 1.56 1.8 1.99 -1.02 1.69 -3.46 0.36 1.34 -2.65 -3.47 -1.17 -2.18 0.03 1.35 -2.48 -2.42 -2.04 2.24 1.48 0.07 1.8 1.18 0.1 1.83 0.73 -0.26 -0.06 0.38 -0.16 -0.4 0.62 0.04 -0.32 -0.4 0.71 1.28 1.12 0.61 1.12 1.22 2.18 0.89 1.12 1.19 0.93 1.03 2.02 0.03 0.76 0.46 -1.21 -0.16 -0.18 0.83 2.64 -2.42 -2.25 -2.76 -2.72 -2.58 0.86 -0.04 1.8 1.22 0.89 0.07 -0.89 -2.45 -3.66 -3.46 -3.84 -4.09 -3 -1.11 -4.01 -2.88 -1.64 -1.64 -2.87 -2.81 -0.87 At4g09650 255046_at
similar to ATP synthase delta chain, chloroplast precursor (Nicotiana tabacum) 4
transport facilitation | transport ATPases | biogenesis of chloroplast
ATP synthesis Photosystems | additional photosystem II components | ATP synthase components


6.48 7.58
At3g62750 0.758
glycosyl hydrolase family 1 protein; similar to hydroxyisourate hydrolase (Glycine max) -2.25 -2.25 -2.25 -2.25 -2.25 -2.25 -1.39 -2.25 -2.25 -2.25 -2.25 -2.25 -2.25 -2.25 -2.25 -2.25 -2.25 -2.25 -2.25 -2.25 -2.25 -2.25 -2.25 1.74 0.55 -2.25 -2.25 -2.25 -2.25 -2.25 -2.25 0.53 1.38 0.56 1.95 1.19 1.19 1.88 2.19 1.6 1.4 1.45 1.29 2.11 1.84 1.83 1.46 1.56 1.37 0.34 0.41 2.27 0.15 0.48 2.91 2.89 0.51 0.79 1.29 1.53 1.15 0.61 -0.91 -2.25 1.9 1.82 1.73 1.7 1.61 1.04 0.4 1.33 2.17 2.78 2.29 0.64 2.36 2.76 1.74 1.82 1.49 1.68 2.04 1.63 1.99 1.92 0.45 2.14 2.22 0.8 1.21 -1.99 0.21 -0.04 -2.25 -2.25 0.38 -2.25 0.96 1.54 -2.25 -2.25 -2.25 0.34 -0.45 0.74 0.79 -0.27 0.19 0.93 0.62 -0.07 0.56 -0.16 -0.07 -0.25 0.42 0.19 -0.22 -0.55 -0.28 0.25 -0.26 -0.59 0.31 -0.9 -0.3 0.89 0.66 0.04 0.18 0.57 0.55 -0.13 -0.28 -1.42 -1.79 -2.06 -0.95 -0.83 0.54 -0.22 -0.11 -0.88 -0.88 -2.25 0.67 0.6 -0.08 -0.59 -0.72 -1.94 -0.8 0.26 0.12 0.66 0.31 0.56 -0.12 -0.54 0.13 -0.57 0.86 0.86 -1.17 -0.54 -0.19 At3g62750 251230_at
glycosyl hydrolase family 1 protein; similar to hydroxyisourate hydrolase (Glycine max) 1
C-compound, carbohydrate catabolism




Glycoside Hydrolase, Family 1 4.45 5.18
At3g11950 0.755
UbiA prenyltransferase family protein -1.28 -1.79 -1.79 -1.79 -1.79 -1.03 -1.79 -0.97 -1.12 -0.9 -0.7 -1.04 -1.3 -1.1 -1.32 -1.27 -1.24 -0.56 -0.72 -1.07 -1.01 -1.79 -1.86 1.82 1.41 -1.01 -2.09 -1.42 -1.45 -1.73 -1.45 1.12 0.04 1.31 0.93 0.28 0.85 0.91 0.97 1.04 1.06 1.3 0.9 1.03 0.94 1.06 1.45 1.33 0.65 0.54 0.77 1.9 0 -0.81 1.85 0.49 0.54 0.42 0.12 0.81 0.33 0.23 -1 -1.19 1.74 1.49 1.66 1.5 1.57 1.4 1.64 1.66 1.72 1.49 1.26 1.53 1.73 1.55 1.66 1.8 1.85 2.02 2.02 1.63 2.12 2 0.11 0.79 0.97 -0.06 1.24 -0.35 0.45 0.28 -0.32 -0.61 -0.96 -0.64 -0.3 0.42 -1.23 -1.29 -0.64 -0.03 -0.03 0.22 0.67 0.23 -0.34 1.12 0.28 -0.06 0.23 0.25 0.15 0.13 0.53 0.18 0.17 0.16 0.43 0.62 0.54 0.19 0.12 0.17 0.88 -0.02 0.24 -0.4 0.25 -0.47 1.6 0.89 0.07 -1.03 -1.63 -1.26 -0.02 0.16 1.68 -1.13 -1.79 -1.79 -1.79 -1.79 0.11 0.08 0.9 0.43 0.28 -0.36 -0.48 -1.79 -1.79 -1.79 -2.27 -1.84 -1.74 -0.89 -2.25 -2.61 -0.91 -0.91 -1.12 -1.38 -0.21 At3g11950 258755_at
UbiA prenyltransferase family protein 2

polyisoprenoid biosynthesis | biosynthesis of proto- and siroheme | mevalonate pathway
Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Plastoquinone biosynthesis
plastochinone and phylloquinone biosynthesis | plastochinone biosynthesis
3.58 4.73
At3g55040 0.755
similar to In2-1 protein, Zea mays -0.28 -0.93 -0.73 -0.69 -0.94 -0.93 -0.85 -0.32 -0.06 -0.15 0.15 0.11 -0.07 -0.12 -0.25 -0.71 -0.75 -0.79 0.04 0.3 0.6 -0.57 -0.68 1.02 0.81 -1.59 -1.9 -1.94 -1.86 -2.47 -1.9 0.7 0.49 0.51 0.93 -0.2 0.49 0.54 0.76 0.76 0.92 0.89 0.76 0.73 0.67 0.93 1.11 1.05 0.6 0.21 0.32 1.56 -0.36 0.2 1.68 0.95 0.76 0.25 0.97 1.28 0.16 0.45 -0.55 -0.94 1.47 1.42 1.5 1.42 1.57 1.32 1.38 1.32 1.34 1.32 1.58 1.03 1.4 1.32 1.68 1.79 1.59 1.58 1.57 0.91 1.61 1.59 0.41 0.86 0.78 0.39 1.4 -1.31 0.44 -0.01 -1.84 -1.37 -0.84 -2.44 0.26 0.32 -3 -2.88 -2.2 0.47 0.05 0.25 0.43 -0.2 -0.23 0.49 -0.2 -0.48 -0.83 -0.8 -0.6 -0.88 -0.71 -0.84 -0.99 -1.12 -0.23 0.17 0.15 0.15 0.04 0.13 0.57 -0.06 0.17 0.04 -0.17 0.24 1.47 0.71 -0.86 -0.6 -1.74 -0.42 -0.39 -0.04 1.46 -0.85 -0.81 -2.21 -1.94 -1.66 1.23 0.83 0.53 0.43 0.25 -0.82 -1.31 -1.45 -1.89 -1.32 -0.46 -0.74 -0.48 -0.03 -0.66 -0.57 -1.27 -1.27 -0.14 0.23 -0.04 At3g55040 251820_at
similar to In2-1 protein, Zea mays 2






Glutathione S-transferase, Lambda family 3.47 4.79
At4g17090 0.755 CT-BMY beta-amylase targeted to the chloroplast -3.46 -3.46 -3.46 -3.46 -2.6 -3.46 -3.46 -3.46 -3.46 -3.46 -1.9 -1.53 -2.11 -1.81 -2.49 -3.46 -3.46 -3.46 -3.46 -1.3 -3.46 -2.71 0.14 1.57 1.92 -3.46 -2.77 -1.97 -3.46 -1.75 -2.77 3.54 1.78 2.96 2.69 0.96 -0.06 -1.2 1.12 1.8 2.62 1.38 -0.1 0.34 1.34 2.38 2.33 1.45 0.09 0.44 1.32 3.43 1.12 0.2 1.82 1.19 3.74 2.71 3.63 2.84 1.93 1.04 -1.96 -2.39 3.86 3.37 3.26 3.42 4.19 4.48 4.55 4.3 3.22 3.5 3.96 2.82 1.36 2.52 3.43 2.81 3.5 3.11 3.04 2.68 3.69 3.88 0.51 2.31 1.23 2.5 3.99 -2.06 -1.7 -3.46 -3.46 -2.66 -0.06 -3.46 2.06 1.98 -2.77 -2.79 -3.46 0.78 1.73 0.91 0.81 2.02 2.04 1.35 0.77 0.03 0.28 -0.51 -1 -1.55 0.44 -0.13 -1.23 -1.91 1.34 2.09 1.61 1.12 0.53 0.69 0.62 0.6 0.93 0.41 0.95 -0.86 2.95 2.02 -0.14 -0.89 0.56 -2.44 0.75 0.35 1.53 -3.05 -2.76 -2.18 -3.46 -3.46 2.57 1.67 1.32 2.06 1.63 -1.05 0.31 -2.74 -2.5 -3.46 -3.46 -3.52 -3.46 -3.3 -3.46 -3.46 -3.46 -3.46 -3.24 -3 -3.46 At4g17090 245346_at CT-BMY beta-amylase targeted to the chloroplast 6 beta-amylase activity | starch catabolism C-compound, carbohydrate catabolism | metabolism of energy reserves (e.g. glycogen, trehalose) starch degradation Starch and sucrose metabolism Cell Wall Carbohydrate Metabolism | starch metabolism


7.19 8.08
At5g19220 0.754 ADG2 Biochemical studies of adg2-1 mutant indicate that mutant plants do not accumulate ADP glucose pyrophosphorylase (ADGase)large subunit protein and that ADGase small subunits assemble as homotetramers. ADG2 gene may encode the large subunit of ADGase. | Encodes the large subunit of ADP-glucose pyrophosphorylase which catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms (ApL1-4) ha -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 2.64 2.87 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 2.02 1.7 2.5 2.37 1.38 2.19 2.27 2.12 1.8 2.18 2.33 2.42 2.4 2.06 2.04 2.25 2.44 2.16 1.11 0.97 2.89 0.62 0.66 2.99 2.4 1.59 1.51 2.04 2.54 0.84 0.65 -3.07 -3.07 2.65 2.67 2.62 2.5 2.6 2.65 2.7 2.95 3.17 2.97 2.81 2.48 3.32 3.2 2.95 2.73 2.97 3.5 3.51 2.02 2.77 2.7 1.33 1.79 2.08 -0.33 2.22 -3.06 0.78 -1.51 -3.07 -3.07 -3.07 -1.79 1.08 1.96 -2.25 -3.07 -1.56 1.46 1.24 1.02 1.77 0.83 -0.65 1.96 0.87 -0.03 0.48 0.36 -0.07 -0.31 0.98 -0.08 -0.41 -0.33 1.39 1.79 1.26 0.89 1.37 0.84 1.77 1.34 1.38 0.9 1.58 0.8 2.24 0.9 0.44 -1.34 -2.4 -2.68 0.46 1.07 2.46 -3.07 -3.07 -3.07 -3.07 -3.07 1.94 0.99 2.04 1.52 1.34 0.68 0.74 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -1.6 -1.6 -3.07 -3.07 -3.07 At5g19220 249927_at ADG2 Biochemical studies of adg2-1 mutant indicate that mutant plants do not accumulate ADP glucose pyrophosphorylase (ADGase)large subunit protein and that ADGase small subunits assemble as homotetramers. ADG2 gene may encode the large subunit of ADGase. | Encodes the large subunit of ADP-glucose pyrophosphorylase which catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms (ApL1-4) ha 10
C-compound, carbohydrate anabolism starch biosynthesis | sucrose biosynthesis | trehalose biosynthesis III | colanic acid building blocks biosynthesis | dTDP-rhamnose biosynthesis | peptidoglycan biosynthesis | UDP-N-acetylglucosamine biosynthesis | galactose degradation I | glucose and glucose-1-phosphate degradation | UDP-glucose conversion | lactose degradation IV | sucrose degradation III Starch and sucrose metabolism Cell Wall Carbohydrate Metabolism | starch metabolism


6.02 6.58
At4g33010 0.753
strong similarity to Glycine dehydrogenase (decarboxylating) A (Flaveria) -3.38 -2.45 -1.86 -1.73 -2.52 -2.02 -2.29 -2.41 -2.11 -2.66 -1.35 -0.06 -0.11 -0.48 -1.12 -1.01 -1.72 -2.93 -2.63 -2.38 -1.83 -3.26 0.64 2.04 2.06 -2.85 -3.38 -2.93 -2.93 -2.93 -2.93 1.53 1.21 2.15 1.86 0.2 1.47 1.11 1.07 1.62 1.89 1.9 1.59 1.18 1.47 1.91 2.06 2.08 1.03 1.27 1.64 2.21 0 -1.01 2.69 0.56 1.81 1.4 0.13 0.69 1.46 0.34 -2.93 -2.52 2.35 1.99 2.1 2.02 2.16 2.16 2.17 2.44 2.47 2.12 2.31 1.4 2.22 1.65 2.21 2.18 2.06 2.47 2.48 1.3 2.14 2.2 1.24 1.15 0.71 0.92 2.38 -1.33 0.25 -1.9 -2.4 -1.01 -1.78 -1.4 -0.65 0.25 -1.64 -1.64 -1.49 1.51 1.04 0.87 0.97 0.83 1.35 0.74 -0.09 -0.36 0.12 0.45 -0.06 0.26 1.03 0.68 0.42 0.3 0.55 1.31 1.12 0.86 1.32 1.27 1.71 0.48 0.82 0.16 0.61 0.44 2.21 1.82 -0.95 -0.26 -0.76 -0.81 -0.43 0.39 2 -1.86 -1.74 -1.36 -1.32 -1.08 1.72 0.9 0.65 1.79 1.63 -1.04 -1.5 -3.12 -3.51 -3.42 -3.3 -3.44 -3.07 -1.72 -3.34 -4.48 -1.45 -1.45 -2.08 -2.6 -1.61 At4g33010 253387_at
strong similarity to Glycine dehydrogenase (decarboxylating) A (Flaveria) 6

glycine degradation I Glycine, serine and threonine metabolism



5.43 7.18


























































































































































































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