| Co-Expression Analysis of: | CYP707A3 (At5g45340) | Institut de Biologie Moléculaire des Plantes |
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| ________________________ | _____________________________________________ | CYPedia Home | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Organ and Tissue Data Set | view / save heatmap as: | OpenOffice table | annotation details for co-expressed genes can be found to the right of the heatmap | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| MS Excel table | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| save / view all data as: | Tab delimited Table | For further information on the experiments please go to the Genevestigator database using the experiment-ID given in brackets. | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| shown are a maximum of 50 genes with r>0.5 (If more co-expressed genes with r>0.5 exist, they can be saved as Tab delimited data only) | magnitude of change [log2(sample / average)] | 0 | 0.3 | 0.6 | 0.9 | 1.2 | 1.5 | 1.8 | 2.1 | 2.4 | 2.7 | >2.99 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| greater than zero | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| less than zero | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Locus | r-value | Name | Description | suspension cell, aphidicolin, 0h ( 5) | suspension cell, aphidicolin, 2h (5) | suspension cell, aphidicolin, 4h (5) | suspension cell, aphidicolin, 6h (5) | suspension cell, aphidicolin, 8h (5) | suspension cell, aphidicolin, 10h (5) | suspension cell, aphidicolin, 12h (5) | suspension cell, aphidicolin, 14h (5) | suspension cell, aphidicolin, 16h (5) | suspension cell, aphidicolin, 19h (5) | suspension cell, sucrose, 0h (6) | suspension cell, sucrose, 2h (6) | suspension cell, sucrose, 4h (6) | suspension cell, sucrose, 6h (6) | suspension cell, sucrose, 8h (6) | suspension cell, sucrose, 10h (6) | suspension cell, sucrose, 12h (6) | suspension cell, 1d (19) | suspension cell, 1d (19) | suspension cell, 5d (19) | suspension cell, 7d (19) | suspension cell, senescing (20) | protoplast (62) | suspension cell, light (153) | suspension cell, dark (153) | callus, transdifferentiation A1 (78) | callus, transdifferentiation A2 (78) | callus, transdifferentiation A3 (78) | callus, transdifferentiation A4 (78) | callus, transdifferentiation A5 (78) | callus, transdifferentiation A6 (78) | seedling (59) | seedling (137) | seedling (138) | seedling (143) | seedling (144) | seedling, cont. light, 26h (149) | seedling, cont. light, 26h (149) | seedling, cont. light, 34h (149) | seedling, cont. light, 38h (149) | seedling, cont. light, 42h (149) | seedling, cont. light, 46h (149) | seedling, cont. light, 50h (149) | seedling, cont. light, 54h (149) | seedling, cont. light, 58h (149) | seedling, cont. light, 62h (149) | seedling, cont. light, 66h (149) | seedling, cont. light, 70h (149) | seedling, cont. light, 74h (149) | seedling, far red then white light (83) | seedling, dark then white light (83) | Cotyledon (87) | Hypocotyl (87) | Hypocotyl (139) | leaf, dedifferentiation A01 (50) | leaf, dedifferentiation A02 (50) | leaf, dedifferentiation A81 (50) | leaf, dedifferentiation A82 (50) | leaf, dedifferentiation A301 (50) | leaf, dedifferentiation A302 (50) | leaf, dedifferentiation A481 (50) | leaf, dedifferentiation A482 (50) | leaf, dedifferentiation B01 (50) | leaf, dedifferentiation B02 (50) | leaf, whole rosette, 0h (56) | leaf, whole rosette, 0h (56) | leaf, whole rosette, 2h (56) | leaf, whole rosette, 4h (56) | leaf, whole rosette, 8h (56) | leaf, whole rosette, 12h (56) | leaf, whole rosette, 13h (56) | leaf, whole rosette, 14h (56) | leaf, whole rosette, 16h (56) | leaf, whole rosette, 20h (56) | leaf, whole rosette, 24h (56) | leaf, whole rosette, 0h (56) | leaf, whole rosette, 4h (56) | leaf, whole rosette, 8h (56) | leaf, whole rosette, 12h (56) | leaf, whole rosette, 16h (56) | leaf, whole rosette, 20h (56) | leaf, mature, high light (68) | leaf, mature, low light (68) | leaf stage 7, petiol (88) | leaf stage 7, proximal half (88) | leaf stage 7, distal half (88) | guard cell enriched (11) | senescing leaf, Col5 (60) | senescing leaf, Col0 (60) | senescing leaf (88) | cauline leaf (88) | roots (87) | whole roots, A. halleri (101) | whole roots, A. petrea (101) | roots (141) | mature roots (23) | lateral roots (24) | lateral roots (29) | roots, axillary buds, dormant (30) | roots, axillary buds, active (30) | Roots, N03 depleted, dex treated (64) | Roots, N03 depleted (64) | root elongation zone (79) | stem (80) | stem (88) | stem, base (66) | stem, tip (66) | stem, 1st node (88) | stem, base, injured with needle (8) | shoot apex (87) | shoot apex (87) | shoot apex (88) | apical region, vegetative, Col (94) | apical region, reproductive, 3d, Col (94) | apical region, reproductive, 5d, Col (94) | apical region, reproductive, 7d, Col (94) | apical region, vegetative, Ler (94) | apical region, reproductive, 3d, Ler (94) | apical region, reproductive, 5d, Ler (94) | apical region, reproductive, 7d, Ler (94) | flower, stage 9 (89) | flower, stage 10 (89) | flower, stage 12 (89) | flower, stage 15 (89) | flower-silique, stage I (84) | flower-silique, stage II (84) | flower-silique, stage III (84) | flower bud, young (9) | flower bud, old (9) | flower (80) | flower (92) | flower (100) | sepal, stage 12 (89) | sepal, stage 15 (89) | petal, stage 12 (89) | petal, stage 15 (89) | stamen, stage 12 (89) | stamen, stage 15 (89) | carpel, stage 12 (89) | carpel, stage 15 (89) | pedicel, stage 15 (89) | pollen, uninucleate microspores (22) | pollen, bicellular (22) | pollen, tricellular (22) | pollen, mature (22) | pollen (74) | silique, young (136) | silique, old (136) | silique, stage 3 (90) | silique, stage 4 (90) | silique, stage 5 (90) | seed, stage 6 (90) | seed, stage 7 (90) | seed, stage 8 (90) | seed, stage 9 (90) | seed, stage 10 (90) | seed, dry (116) | seed, dry (117) | seed, fresh (96) | seed, dormant (96) | seed, imbibed, 1h (117) | seed, imbibed, 3h (117) | seed, imbibed, 22°C (118) | seed, imbibed, far red, 22°C (132) | seed, imbibed, 4°C (118) | seed, imbibed, far red, 4°C (132) | seed, imbibed (116) | Locus | Probeset | Name | Description | Annotation score | GO.keywords | FunCat keywords | AraCyc annotations | KEGG annotations | BioPath annotations | AcylLipid category | Literature annotations | Gene family | 90% quantile of DE | max. DE |
| At5g45340 | 1.000 | CYP707A3 | cytochrome P450 family protein | 0.19 | 0.18 | -1.55 | -1.08 | -1.67 | -1.55 | -1.55 | -1.55 | -0.84 | -0.95 | 0.06 | 2.24 | 0.75 | 0.56 | -0.16 | -0.64 | -1.55 | -1.13 | -0.74 | 1.6 | 1.5 | -0.42 | 1.11 | -0.63 | -1.11 | 0.65 | 0.12 | -0.33 | 0.64 | 0.61 | 0.69 | -0.56 | 1.35 | -0.45 | -1.32 | 0.66 | -1.55 | -1.55 | -1.55 | -1.55 | -1.55 | -1.55 | -1.55 | -1.55 | -1.55 | -1.55 | -1.55 | -1.55 | -1.55 | 0.22 | -0.59 | 4.08 | 3.15 | -1.55 | -0.89 | 2.36 | -1.02 | -1.57 | 2.63 | 2.96 | -0.71 | -1.55 | -0.05 | 0.37 | -1.63 | 1.17 | -0.07 | -0.72 | -0.17 | 1.03 | 1.27 | -0.43 | -1.24 | -1.55 | -1.55 | -0.99 | -1.55 | -1.55 | -1.71 | -0.56 | -1.31 | -1.55 | -1.55 | 2.35 | 2.59 | 2.62 | 1.62 | -0.56 | -1.31 | 0.52 | 2.12 | 3.72 | 1.87 | 0.39 | 2.16 | 3.08 | 3.13 | 0.52 | 2.27 | 1.29 | 1.74 | 2.04 | 0.86 | 3.46 | 2.35 | 1.12 | -0.1 | 2.45 | -0.37 | 3.32 | 2.22 | -1.71 | -2.6 | -1.67 | -1.98 | -1.97 | -1.37 | -1.7 | -1.86 | -2.1 | -1.59 | 0.79 | -0.06 | 1.28 | 1.14 | 1.32 | -0.36 | 0.19 | -1.11 | 2.43 | 0.4 | -1.22 | 1.3 | -0.3 | -0.01 | 3.06 | 0.09 | 1.7 | 2.24 | 1.59 | 2.16 | -1.55 | -1.55 | -1.55 | -1.55 | -1.55 | 0.31 | -1.38 | 1.24 | -0.39 | -0.43 | 0.56 | -0.54 | 1.38 | -1.55 | 2 | -1.39 | -0.85 | -1.55 | -1.04 | -0.3 | 0.6 | 0.03 | 0.03 | -0.91 | -0.88 | 1.12 | At5g45340 | 248964_at | CYP707A3 | cytochrome P450 family protein | 10 | degradation of abscisic acid | cytochrome P450 family, 8’-hydroxylase for ABA, degradation of abscisic acid | 4.54 | 6.68 | ||||||
| At4g29780 | 0.764 | expressed protein | 0.47 | -0.71 | -1.42 | -0.86 | -0.99 | -1.14 | -0.68 | -0.34 | 0.14 | -0.87 | -0.44 | 1.15 | 0.25 | 0.55 | 0.31 | 0.16 | -0.17 | -1.09 | -0.95 | -0.74 | -0.05 | 0.13 | 2.57 | -1.9 | -1.21 | -0.76 | -0.9 | -0.45 | -0.55 | -0.26 | -0.32 | -0.37 | 1.12 | -0.98 | -1.9 | -0.79 | -1.52 | -1.36 | -1.8 | -1.66 | -1.41 | -1.97 | -1.9 | -1.9 | -1.69 | -1.83 | -1.86 | -1.68 | -1.9 | 0.41 | -0.33 | 3.18 | 2.5 | -1.06 | -0.66 | 3 | -0.19 | -0.99 | 3.79 | 4.25 | -0.61 | -1.07 | 0.17 | -1.81 | -1.31 | 0.53 | -0.49 | -0.97 | -1.15 | 0.51 | 0.51 | -0.83 | -1.06 | -1.51 | -1.51 | -1.7 | -1.9 | -1.9 | -1.95 | -2 | -2.13 | -1.44 | -1.9 | 1.38 | 1.19 | 1.58 | 3.11 | -0.75 | -0.57 | 0.27 | 1.86 | 3.43 | 0.81 | 0.1 | -0.55 | 2.35 | 2.94 | -0.56 | 2.24 | 1.07 | 0.08 | 0.03 | -0.22 | 2.19 | 0.68 | -0.13 | -0.65 | 1.36 | 1.28 | 3.33 | 2.72 | -1.87 | -1.97 | -2.25 | -2.36 | -2.14 | -1.34 | -2.64 | -2.08 | -2.23 | -1.18 | -0.35 | -0.17 | 0.55 | 1.75 | 1.19 | -0.05 | 0.06 | 0.18 | 1.64 | -1.32 | -1.12 | 3.35 | 1.82 | 3.39 | 2.44 | 1.78 | 1.52 | 3.51 | 1.97 | 1.13 | -0.61 | -0.41 | -1.1 | -1.07 | -1.9 | 2.47 | 1.62 | -0.17 | 1.73 | 0.86 | 1.79 | 1.27 | 3.45 | 2.4 | 3.29 | 0.65 | 1.07 | 0.35 | -1.3 | 2.04 | 1.32 | -0.32 | -0.32 | -0.56 | -0.83 | -1.42 | At4g29780 | 253643_at | expressed protein | 1 | lipases pathway | 5.23 | 6.89 | |||||||||
| At5g66210 | 0.641 | CPK28 | member of Calcium Dependent Protein Kinase | 0.53 | 1.2 | -1.6 | -0.42 | -0.47 | -0.28 | -0.28 | 0.09 | 0.13 | -0.11 | -0.14 | 1.48 | 0.8 | 0.41 | 0.27 | 0.05 | -0.39 | -0.13 | -0.1 | 1.47 | 0.97 | 0.47 | 0.75 | -1.28 | -0.03 | 0.75 | 0.52 | 0.78 | 0.77 | 0.41 | 0.83 | -0.89 | 0.86 | -1 | -1.59 | 0.05 | -1.05 | -1.63 | -1.49 | -0.96 | -1.24 | -1.11 | -1.54 | -1.63 | -1.01 | -0.83 | -1.23 | -1.7 | -0.72 | -0.25 | -1.01 | 1.91 | 1.27 | -0.78 | -0.46 | 2.96 | 0.21 | 0.05 | 2.98 | 3.82 | 0.99 | 0.49 | 1.18 | 0.37 | 0.22 | 2.12 | 1.48 | 0.35 | 0.01 | 0.07 | 1.65 | 0.34 | -0.7 | -0.76 | -0.56 | -0.56 | -1.48 | -1.4 | -0.64 | -0.49 | -0.5 | -1.2 | -1.35 | 1.37 | 2.04 | 2.42 | 1.42 | 0.19 | 0.14 | 1.69 | 1.54 | 1.65 | 0.05 | -0.31 | -0.53 | 0.37 | -0.3 | -0.06 | 0.96 | 0.12 | 0.08 | 0.33 | -0.08 | 1.38 | 0.64 | 0.03 | -1.27 | 0.66 | -0.02 | 1.19 | 0.4 | -0.21 | -0.12 | -0.28 | -0.16 | 0.13 | -0.31 | 0 | -0.34 | -0.24 | 0.13 | -0.01 | -0.36 | -0.05 | 0.04 | -0.31 | -0.88 | -0.63 | -0.82 | 0.31 | -0.39 | -1.63 | 0.72 | 0.66 | -0.35 | 0.56 | -1.37 | -0.44 | 0.77 | 0.15 | 0.22 | -1.63 | -1.63 | -1.63 | -1.63 | -1.63 | 0.04 | 0.04 | -0.88 | -0.57 | -0.63 | -0.95 | -0.82 | -0.14 | -0.5 | -0.12 | 0.81 | 0.97 | -0.07 | -0.81 | 0.87 | 0.78 | 1.05 | 1.05 | -0.48 | -0.27 | -1.09 | At5g66210 | 247137_at | CPK28 | member of Calcium Dependent Protein Kinase | 2 | Inositol phosphate metabolism | Nicotinate and nicotinamide metabolism | Benzoate degradation via CoA ligation | 3.27 | 5.52 | |||||||
| At4g11280 | 0.631 | ACS6 | encodes a a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family | 0.99 | 1.21 | -1.57 | -1.57 | -1.57 | -0.91 | -0.95 | -1.57 | -0.16 | -0.84 | -1.57 | -0.78 | -1.57 | -1.57 | -0.87 | -0.71 | -1.57 | -1.57 | -1.57 | -0.41 | -1.57 | -1.57 | 2.99 | -0.56 | -1.39 | -0.63 | -0.82 | -0.25 | -0.37 | -0.52 | -0.66 | 0.08 | 1.9 | 0.64 | -0.49 | -0.51 | -1.26 | -1.57 | -1.36 | -1.23 | -0.89 | -1.36 | -1.57 | -1.57 | -0.95 | -0.87 | -0.84 | -1.1 | -0.26 | -0.57 | -1.01 | 2.48 | 2.54 | 0.26 | 0.95 | 2.46 | 1.35 | 1.26 | 2.19 | 2.9 | 2.73 | 2.04 | 2.41 | 0.67 | -0.27 | 0.23 | -0.16 | -0.15 | -0.37 | 0.73 | 1.32 | 0.11 | -0.17 | -0.46 | -0.3 | -1.12 | -0.55 | -1.06 | -0.91 | -0.62 | -1.2 | -0.45 | -0.01 | 0.77 | 0.61 | 0.86 | 2.43 | 0 | 0.14 | 0.64 | 1.19 | 3.58 | 0.46 | -0.5 | -0.41 | 2.49 | 3.22 | -0.57 | 2.06 | 0.61 | 1.37 | 1.25 | -0.44 | 0.26 | -0.07 | 1.34 | 0.51 | -0.14 | -0.38 | 2.21 | 1.63 | -1.12 | -1.25 | -1.63 | -1.31 | -1.73 | -0.03 | -1 | -1.04 | -1.08 | -0.67 | -0.16 | -0.26 | 0.38 | 1.7 | 1.2 | 1.15 | -0.13 | 0.54 | 1.53 | -0.68 | -0.28 | 3.01 | 1.32 | 3.64 | 2.17 | 2.04 | 1.99 | 3.35 | 1.78 | 0.3 | -1.57 | -1.5 | -1.57 | -1.57 | -1.57 | 0.93 | 0.45 | 0.73 | 1.74 | -0.55 | -0.49 | -0.57 | 0.12 | -0.72 | -0.54 | -0.49 | -0.36 | -1.26 | -1.57 | -0.36 | -1.84 | -1.29 | -1.29 | -0.8 | -0.91 | -1.57 | At4g11280 | 254926_at | ACS6 | encodes a a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family | 4 | response to external stimulus | response to auxin stimulus | response to ethylene stimulus | induction of apoptosis by oxidative stress | response to mechanical stimulus | ethylene biosynthesis | secondary meatbolism | intracellular signalling | Propanoate metabolism | Biosynthesis of Amino Acids and Derivatives | Methionin/SAM/ethylene metabolism from cysteine and aspartate | 4.10 | 5.48 | ||||
| page created by Juergen Ehlting | 05/29/06 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||