| Co-Expression Analysis of: | CYP708A3 (At1g78490) | Institut de Biologie Moléculaire des Plantes |
|
_____________________________________________ | ____________________________________ | ____________________________________ | ____________________________________ | ____________________________________ | ____________________________________ | ____________________________________ | ____________________________________ | ____________________________________ | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| ________________________ | _____________________________________________ | CYPedia Home | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Hormones etc. Data Set | save / view heatmap as: | OpenOffice Table | annotation details for co-expressed genes can be found to the right of the heatmap | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| MS Excel Table | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| save / view all data as: | Tab delimited Table | For further information on the experiments please go to the Genevestigator database using the experiment-ID given in brackets. | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| shown are a maximum of 50 genes with r>0.5 (If more co-expressed genes with r>0.5 exist, they can be saved as Tab delimited data only) | magnitude of change [log2(treatment/control)] | 0 | 0.3 | 0.6 | 0.9 | 1.2 | 1.5 | 1.8 | 2.1 | 2.4 | 2.7 | >2.99 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| greater than zero | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| less than zero | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Locus | r-value | Name | Description | ethylene, 3h, petiole (13) | mock, 30min, seedling (110) | IAA, 30min, seedling (110) | IAA, 1h, seedling (110) | IAA, 3h, seedling (110) | zeatin, 30min, seedling (110) | zeatin, 1h, seedling (110) | zeatin, 3h, seedling (110) | GA3, 30min, seedling (110) | GA3, 1h, seedling (110) | GA3, 3h, seedling (110) | ABA, 30min, seedling (110) | ABA, 1h, seedling (110) | ABA, 3h, seedling (110) | MJ, 30min, seedling (110) | MJ, 1h, seedling (110) | MJ, 3h, seedling (110) | ACC, 30min, seedling (110) | ACC, 1h, seedling (110) | ACC, 3h, seedling (110) | BL, 30min, seedling (110) | BL, 1h, seedling (110) | BL, 3h, seedling (110) | ABA, 3 uM, imbided seed (116) | ABA, 30 uM, imbided seed (116) | GA, 3h, imbibed seed (119) | GA, 6h, imbibed seed (119) | GA, 9h, imbibed seed (119) | GA, 3h, imbibed seed (134) | GA, 6h, imbibed seed (134) | GA, 9h, imbibed seed (134) | GA, 30min, whole plant (99) | GA, 60min, whole plant (99) | GA, 3h, whole plant (99) | IAA, 0.1uM, 1h, seedling (144) | IAA, 0.1uM, 3h, seedling (144) | IAA, 1uM, 1h, seedling (144) | IAA, 1uM, 3h, seedling (144) | ppi, 3h, seedling (113) | ppi, 12h, seedling (113) | uni, 3h, seedling (113) | uni, 12h, seedling (113) | brz220, 3h, seedling (113) | brz220, 12h, seedling (113) | brz91, 3h, seedling (113) | brz91, 12h, seedling (113) | pac, 3h, seedling (113) | pac, 12h, seedling (113) | px, 3h, seedling (113) | px, 12h, seedling (113) | pno8, 3h, seedling (113) | pno8, 12h, seedling (113) | ibup, 3h, seedling (113) | B9, 3h, seedling (113) | AgNO3, 3h, seedling (113) | AVG, 3h, seedling (113) | Sal, 3h, seedling (113) | MG132, 3h, seedling (113) | 246T, 3h, seedling (113) | PCIB, 3h, seedling (113) | TIBA, 3h, seedling (113) | NPA, 3h, seedling (113) | CHX, 3h, seedling (113) | Colm, 3h, seedling (113) | ColPNO8, 3h, seedling (113) | ColBrz, 3h, seedling (113) | glucose, 8h, seedling (14) | sucrose, 8h, seedling (15) | deoxyglucose, 8h_seedling (14) | methylglucose, 8h, seedling (14) | K depleted, whole rosette (97) | K depleted, root (97) | Sulfate depleted, 2h, root (112) | Sulfate depleted, 4h, root (112) | Sulfate depleted, 8h, root (112) | Sulfate depleted, 12h, root (112) | Sulfate depleted, 24h, root (112) | mannitol, 8h, seedling (14) | CO2, 1000ppm, guard cell enriched (11) | CO2, 1000ppm, mature leaf (11) | CO2, high light, whole rosette (95) | CO2, medium light, whole rosette (95) | CO2, low light, whole rosette (95) | CO2, 2h, juvenile leaf (151) | CO2, 4h, juvenile leaf (151) | CO2, 6h, juvenile leaf (151) | CO2, 12h, juvenile leaf (151) | CO2, 24h, juvenile leaf (151) | CO2, 48h, juvenile leaf (151) | dark, 45min, seedling (109) | dark, 4h, seedling (109) | far red, 45min, seedling (109) | far red, 4h, seedling (109) | red pulse1, seedling (109) | red pulse2, seedling (109) | red, 45min, seedling (109) | red, 4h, seedling (109) | blue, 45min, seedling (109) | blue, 4h, seedling (109) | UV-A pulse1, seedling (109) | UV-A pulse2, seedling (109) | UV-AB pulse1, seedling (109) | UV-AB pulse2, seedling (109) | UV-A, 18h, mature leaf (72) | UV-B, 18h, mature leaf (72) | Locus | Probeset | Name | Description | Annotation score | GO.keywords | FunCat keywords | AraCyc annotations | KEGG annotations | BioPath annotations | AcylLipid category | Literature annotations | Gene family | 90% quantile of DE | max. DE |
| At1g78490 | 1.000 | CYP708A3 | cytochrome P450 family protein | -0.38 | -0.05 | 0.17 | 0.45 | 0.05 | 0.14 | -0.17 | 0.03 | 0.07 | 0.07 | -0.16 | -0.07 | -0.01 | -0.35 | 0.71 | 1.22 | 1.73 | 0.19 | 0.01 | -0.22 | 0.26 | 0.14 | -0.04 | -0.05 | -0.05 | 0.13 | 0.09 | -0.05 | 0.13 | 0.09 | -0.05 | -0.24 | -0.23 | 0.78 | 0.24 | -0.05 | -0.09 | -0.2 | 0.07 | 0.16 | 0.11 | -0.18 | -0.25 | -0.06 | 0.07 | 0.06 | 0.19 | 0.08 | 0.37 | 0.38 | -0.07 | 0.34 | 0.22 | 0.16 | 0.38 | 0.06 | -0.06 | 0.07 | 0.02 | 0.13 | 0.22 | -0.51 | -0.62 | 0.53 | 0.03 | 0.36 | -0.02 | -0.05 | -0.03 | -0.14 | -0.59 | -0.07 | -0.34 | 0.11 | 0.07 | -0.85 | 0.05 | -0.19 | 1.07 | -0.09 | -0.55 | -0.04 | -0.14 | -0.6 | -0.23 | 0 | -0.34 | 0.19 | 0.42 | -0.12 | -0.43 | 0.21 | -0.48 | -0.22 | -0.08 | 0 | 0.06 | -0.62 | -0.01 | -0.08 | -0.08 | -0.12 | -0.07 | -0.56 | -1.56 | At1g78490 | 263120_at | CYP708A3 | cytochrome P450 family protein | 1 | cytochrome P450 family | 1.09 | 3.29 | |||||||
| At1g24070 | 0.645 | ATCSLA10 | encodes a gene similar to cellulose synthase | -0.35 | -0.08 | -0.28 | -0.08 | -0.34 | 0.14 | 0.14 | -0.38 | 0.11 | 0.1 | -0.13 | 0.4 | 0.12 | 1.11 | 0.77 | 1.9 | 3.16 | 0.23 | 0.28 | -0.35 | 0.51 | 0.59 | -0.09 | 0.32 | -0.03 | -0.21 | -0.35 | -0.78 | -0.21 | -0.35 | -0.78 | -0.26 | -0.36 | 1.05 | 0.32 | -0.08 | -0.16 | -0.31 | 0.04 | -0.5 | -0.05 | 0.05 | -0.28 | -0.07 | 0.01 | 0.38 | -0.3 | -0.18 | -0.04 | 0.21 | -0.14 | 0.35 | -0.1 | -0.06 | 0.14 | -0.02 | 0.04 | 0.13 | 0.26 | 0.33 | 0.12 | -0.27 | -0.05 | -0.17 | 0.43 | 0.38 | -0.47 | -0.08 | -0.22 | -0.28 | -0.21 | 0.2 | -0.35 | 0.28 | -0.02 | -0.19 | 0.17 | -0.36 | -0.31 | 0.16 | -0.22 | 0.01 | -0.31 | -0.19 | -0.18 | 0.02 | -0.15 | -0.07 | 0.05 | -0.05 | -0.13 | -0.22 | 0.16 | 0 | 0.18 | -0.39 | 0.13 | -0.28 | -0.03 | -0.3 | -0.25 | -0.13 | -0.21 | -0.25 | -1.42 | At1g24070 | 263031_at | ATCSLA10 | encodes a gene similar to cellulose synthase | 4 | cellulose biosynthesis | 0.96 | 4.57 | |||||||
| At1g52400 | 0.585 | BGL1 | encodes a member of glycosyl hydrolase family 1 | -0.26 | -0.03 | -0.1 | -0.06 | 0 | -0.11 | -0.03 | -0.16 | -0.08 | 0.09 | -0.01 | -0.24 | -0.15 | -0.08 | -0.04 | 1.2 | 2.9 | -0.47 | -0.35 | 0.06 | -0.01 | -0.2 | -0.18 | -0.03 | -0.03 | -0.03 | 0.11 | 0.63 | -0.03 | 0.11 | 0.63 | -0.17 | -0.61 | 0.59 | 0.14 | -0.31 | -0.34 | -0.65 | 0.12 | 0.1 | 0.32 | 0.33 | -0.03 | -0.08 | 0.14 | 0.16 | 0.32 | 0.28 | 0.92 | 0.35 | 0.07 | 0.3 | 0 | 0.12 | 0.66 | 0.18 | 0.04 | -0.11 | 0.04 | -0.21 | 0.23 | 0.28 | -1.56 | 1.13 | 0.91 | 1.09 | -1.09 | 0.43 | -0.79 | -0.85 | 0.09 | 1.68 | -0.59 | 0.03 | -0.5 | 0.04 | -0.14 | -0.68 | 0.16 | -0.94 | -0.3 | -0.49 | -1.47 | 0.05 | -0.14 | 0.15 | -0.13 | 0 | 0.08 | -0.13 | -0.11 | 0.02 | -0.33 | 0.19 | 0.02 | 0.06 | -0.05 | 0.09 | 0.05 | 0.2 | -0.24 | -0.08 | -0.61 | -0.08 | -1.43 | At1g52400 | 259640_at | BGL1 | encodes a member of glycosyl hydrolase family 1 | 1 | Aminosugars metabolism | Nucleotide sugars metabolism | Glycan Biosynthesis and Metabolism | Glycoside Hydrolase, Family 1 | 1.76 | 4.45 | ||||||
| At1g78660 | 0.550 | similar to Gamma-glutamyl hydrolase precursor (Gamma-Glu-X carboxypeptidase / Conjugase) from Arabidopsis thaliana | -0.09 | -0.06 | -0.32 | -0.32 | -0.24 | -0.19 | -0.14 | 0.39 | -0.1 | -0.03 | 0.24 | -0.08 | 0.05 | 0.14 | 1.01 | 1.87 | 2.46 | 0.26 | 0.35 | -0.05 | 0.12 | 0.4 | 0.12 | -0.36 | -0.78 | -0.06 | -0.06 | -0.26 | -0.06 | -0.06 | -0.26 | -0.01 | 0.46 | -0.5 | -0.21 | -0.53 | -0.23 | -0.72 | -0.27 | 0.47 | -0.15 | 0.02 | 0.16 | -0.01 | -0.04 | 0.09 | 0.18 | 0.18 | 0.08 | 0.21 | -0.06 | 0.03 | -0.09 | 0.26 | 0.04 | 0.2 | -0.79 | -0.32 | -0.12 | -0.22 | -0.63 | -0.08 | -1.32 | 0.43 | 0.25 | 0.46 | -0.25 | 0.02 | -0.01 | 0.14 | 0.16 | 0.71 | -0.03 | -0.1 | 0.13 | -0.13 | -0.31 | 0.41 | 0.6 | 0.02 | 0.27 | -0.22 | -0.26 | -0.16 | -0.44 | 0.19 | -0.02 | 0.27 | 0.02 | -0.09 | -0.05 | -0.13 | -0.16 | -0.15 | 0.04 | -0.17 | -0.08 | -0.1 | -0.25 | -0.13 | -0.04 | -0.2 | -0.2 | 0.12 | -0.52 | At1g78660 | 263137_at | similar to Gamma-glutamyl hydrolase precursor (Gamma-Glu-X carboxypeptidase / Conjugase) from Arabidopsis thaliana | 4 | Folate biosynthesis | 1.00 | 3.78 | |||||||||
| At1g69370 | 0.526 | CM3 | chorismate mutase 3 (CM3) | -0.26 | -0.1 | -0.14 | -0.44 | -0.11 | 0.35 | -0.4 | -0.25 | -0.25 | -0.27 | -0.35 | 0.22 | -0.42 | -0.37 | 1.55 | 1.69 | 1.79 | 0.36 | -0.31 | -0.14 | 0.17 | -0.17 | 0.14 | -0.13 | -0.23 | -0.01 | 0.46 | 0.88 | -0.01 | 0.46 | 0.88 | -0.27 | -0.4 | 0.02 | 0.16 | 0.05 | 0.09 | -0.36 | 0.06 | 0 | 0.05 | 0.19 | -0.1 | -0.19 | -0.07 | -0.08 | -0.05 | -0.31 | 0.05 | 0.31 | -0.07 | 0.34 | 0.13 | 0.08 | 0.42 | 0.27 | -0.26 | -0.26 | 0.16 | 0.37 | 0.02 | -0.01 | -0.13 | 0.49 | -0.24 | 0.28 | 0.02 | 0.15 | 0.02 | -0.05 | 0.03 | 0.14 | -0.2 | -0.36 | -0.4 | -0.3 | -0.26 | 0.1 | -0.61 | -0.94 | -0.11 | -0.26 | -0.39 | -0.01 | -0.01 | -0.03 | -0.11 | 0.09 | 0.03 | -0.19 | -0.18 | -0.1 | -0.25 | 0.17 | -0.11 | -0.07 | -0.04 | 0.01 | -0.18 | -0.09 | -0.09 | -0.09 | -0.19 | -0.04 | -0.44 | At1g69370 | 260360_at | CM3 | chorismate mutase 3 (CM3) | 10 | aromatic amino acid family biosynthesis, anthranilate pathway | response to biotic stimulus | chorismate mutase activity | aromatic amino acid family biosynthesis, shikimate pathway | phenylalanine biosynthesis II | tyrosine biosynthesis I | Phenylalanine, tyrosine and tryptophan biosynthesis | Phenylpropanoid Metabolism | Aromatic amino acid (Phe, Tyr, Trp) metabolism | Shikimate pathway | Phe/Tyr biosynthesis | 0.89 | 2.73 | |||
| At1g13280 | 0.525 | AOC4 | Encodes allene oxide cyclase. One of four genes in Arabidopsis that encode this enzyme, which catalyzes an essential step in jasmonic acid biosynthesis. Gene expression is reduced during scenescence, a process that involves jasmonic acid signalling pathw | -0.04 | 0.01 | 0.08 | 0.16 | 0.61 | 0 | 0.12 | -0.18 | 0.2 | 0.13 | 0.12 | 0.2 | 0.17 | -0.17 | 0.56 | 1.13 | 1.4 | 0.32 | 0.12 | 0.2 | 0.33 | 0.26 | 0.21 | -0.07 | -0.11 | -0.17 | -0.16 | 0.11 | -0.17 | -0.16 | 0.11 | -0.15 | -0.55 | -0.11 | 0.28 | 0.22 | 0.16 | 0.13 | -0.03 | 0.18 | 0.03 | 0.15 | 0.07 | 0.17 | -0.17 | 0.07 | 0 | 0.12 | 0.23 | 0.63 | -0.14 | 0.11 | 0.04 | 0.18 | -0.04 | -0.1 | -0.19 | -0.03 | 0.08 | 0 | -0.17 | -0.17 | -2.48 | -0.19 | -0.54 | -0.13 | -0.28 | 0.31 | -0.45 | -0.63 | 0.12 | 0.02 | 0.12 | -0.06 | 0.23 | 0.1 | -0.14 | -0.68 | -0.17 | -0.36 | 0.18 | 0.05 | -0.43 | -0.26 | -0.19 | 0.14 | 0.03 | 0.04 | -0.02 | 0.12 | 0.56 | -0.04 | -0.2 | -0.18 | 0.62 | -0.17 | 0.21 | -0.04 | -0.07 | -0.17 | 0.56 | -0.1 | 0.28 | -0.23 | -1.8 | At1g13280 | 259366_at | AOC4 | Encodes allene oxide cyclase. One of four genes in Arabidopsis that encode this enzyme, which catalyzes an essential step in jasmonic acid biosynthesis. Gene expression is reduced during scenescence, a process that involves jasmonic acid signalling pathw | 6 | jasmonic acid biosynthesis | jasmonic acid biosynthesis | lipoxygenase pathway | Lipid signaling | 1.09 | 3.88 | |||||
| At2g28850 | 0.521 | CYP710A3 | cytochrome P450 family protein, similar to Cytochrome P450 61 (C-22 sterol desaturase) from Saccharomyces cerevisiae | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | 1.12 | 2.46 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.56 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | At2g28850 | 266218_s_at (m) | CYP710A3 | cytochrome P450 family protein, similar to Cytochrome P450 61 (C-22 sterol desaturase) from Saccharomyces cerevisiae | 1 | cytochrome P450 family | 0.00 | 3.03 | |||||||
| At2g28860 | 0.521 | CYP710A4 | cytochrome P450 family protein, similar to Cytochrome P450 61 (C-22 sterol desaturase) (Saccharomyces cerevisiae) | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | 1.12 | 2.46 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.56 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | -0.03 | At2g28860 | 266218_s_at (m) | CYP710A4 | cytochrome P450 family protein, similar to Cytochrome P450 61 (C-22 sterol desaturase) (Saccharomyces cerevisiae) | 1 | cytochrome P450 family | 0.00 | 3.03 | |||||||
| page created by Juergen Ehlting | 06/02/06 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||