Co-Expression Analysis of: CYP708A3 (At1g78490) Institut de Biologie Moléculaire des Plantes











































































































































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Mutant Data Set save / view heatmap as: OpenOffice Table annotation details for co-expressed genes can be found to the right of the heatmap

























































































































































MS Excel Table

























































































































































save / view all data as: Tab delimited Table For further information on the experiments please go to the Genevestigator database using the experiment-ID given in brackets.






















































































































































shown are a maximum of 50 genes with r>0.5 (If more co-expressed genes with r>0.5 exist, they can be saved as Tab delimited data only) magnitude of change  [log2(mutant / wild type)]  0   0.3   0.6   0.9  1.2   1.5   1.8   2.1   2.4   2.7   >3















































































































































greater than zero                                                         



















































































































































less than zero                                                         



















































































































































Locus r-value Name Description 35S leafy, seedling (143) aba1, fresh seeds (96) abi1, fresh seeds (96) abi3, fresh seeds (96) acn1, seedlings (63) acn1, seedlings, with sucrose (63) add3, seedling (55) ag12, shoot apex (89) ag12, flower (89) akt1, roots (141) anr1, roots, dex treated, N03 depleted (64) anr1, roots, not dex treated, N03 depleted (64) anr1, roots, nitrate depleted (135) ap1, shoot apex (89) ap1, flower (89) ap2, shoot apex (89) ap2, flower (89) ap3, shoot apex (89) ap3, flower (89) ape2, mature leaf, high light (68) ape3, mature leaf, low light (68) ARR22o, seedling (115) ARR22o, seedling, zeatin (115) ar4, whole plant (104) bountifullo, juvenile leaf (48) camta1, suspension cell (138) camta1, seedling (138) cdb1, seedling (137) cdpk-yfp1, seedling (65) cdpk-yfp4, seedling (65) chs, juvenile leaf (67) cir1-PR1-LUC, whole rosette (31) cir1-ein2-PR-LUC, whole rosette (31) cls8, seedling (76) cls8, seedling, 4°C (76) clv3, shoot apex (89) clv3, flower (89) cngc1, roots (141) cngc4, roots (141) co, apical region, vegetative (94) co, apical region, reproductive, 3d (94) co, apical region, reproductive, 5d (94) co, apical region, reproductive, 7d (94) coi1, senescing leaf (60) cov, stem, base (66) cov, stem, tip (66) det2, seedling, mock, 30min (111) det2, seedling, BL, 30min (111) det2, seedling, mock, 1h (111) det2, seedling, BL, 1h (111) det2, seedling, mock, 3h (111) det2, seedling, BL, 3h (111) det2, seedling (131) ein2, senescing leaf (60) ein2-PR1-LUC, whole rosette (31) etr1, whole plant, water (99) etr1, whole plant, GA4, 60 min (99) fls2, seedling, control (81) fls2, seedling, flg22 (81) ft, apical region, vegetative (94) ft, apical region, reproductive, 3d (94) ft, apical region, reproductive, 5d (94) ft, apical region, reproductive, 7d (94) fus, fresh seeds (96) ga1, seedling, mock, 30min (111) ga1, seedling, GA3, 30min (111) ga1, seedling, mock, 1h (111) ga1, seedling, GA3, 1h (111) ga1, seedling, mock, 3h (111) ga1, seedling, GA3, 3h (111) ga1, seedling (131) gl1, rosette leaf, stage 10 (88) gl1, rosette leaf, stage 12 (88) gpa1, seedling, ABA, 3h (75) gpa1, seedling (75) gun1-gun5, whole plant, Norflurazone (98) hic, guard cell enriched (11) hic, mature leaf (11) hic, guard cell enriched, CO2 (11) hic, mature leaf, CO2 (11) iae1, hypocotyl (139) iae2, hypocotyl (139) icl2 (Col), seedling (28) icl2 (Ws), seedling (28) ir1, roots (142) ku80, whole plant (57) ku80, whole plant, bleomycin, 3d (57) leafy-GR, seedling, de (143) leafy-GR, seedling, de/cyc (143) leafy-GR, seedling, cyc (143) lfy, shoot apex (89) lfy, flower (89) lfy, apical region, vegetative (94) lfy, apical region, reproductive, 3d (94) lfy, apical region, reproductive, 5d (94) lfy, apical region, reproductive, 7d (94) ms1-ttg, flower bud, old (9) ms1-ttg, flower bud, young (9) myb61, seedling (15) myb61, seedling, sucrose (15) MYB61o, seedling (15) MYB61o, seedling, sucrose (15) nahG, senescing leaf (60) o1, seedling (46) o1, seedling, H202, 3h (46) pasta2M1, mature leaf (150) pho1, mature leaf (61) pho3, leaf (27) pmr4, mature leaf, Erysiphe cichoracearum (85) pmr4, mature leaf (85) RALF1o, seedling (152) rbohB, seedling (59) rbohB, seedling, 30°C, 1h (59) rbohB, seedling, 40°C, 1h (59) rbohC, root, elongation zone (79) rdo, fresh seeds (96) rhd2, lateral roots (29) sfr2, whole rosette, 4°C (58) sfr2, whole rosette (58) sfr2-1, whole rosette, 4°C, 24h (12) sfr2-1, whole rosette, 4°C, 24h (12) sfr3, whole rosette, 4°C (58) sfr3, whole rosette (58) sfr6, whole rosette, 4°C (58) sfr6, whole rosette (58) sfr6, whole rosette, drought (58) sfr6, seedling (76) sfr6, seedling, 4°C (76) sfr6, suspension cell, light (153) sfr6, suspension cell, dark (153) sph1, leaves, stage 5 (145) sph1, leaves, stage 14 (145) tcp13, flowers (100) tcp14, flowers (100) ttg, flower bud, old (9) ttg, flower bud, young (9) ufo1, shoot apex (89) ufo1, flower (89) gun1-gun5, seedling, far red then white light (83) gun1-gun5, seedling, dark then white light (83) zorro, seedlings, control, 2h (103) zorro, seedlings, control 24h, (103) zorro, seedlings, zearalenone, 2h (103) zorro, seedlings, zearalenone, 24h (103) Locus Probeset Name Description Annotation score GO.keywords FunCat keywords AraCyc annotations KEGG annotations BioPath annotations AcylLipid category Literature annotations Gene family 90% quantile of DE max. DE
At1g78490 1.000 CYP708A3 cytochrome P450 family protein -0.69 0.07 0.07 0.54 -0.11 0.26 -0.47 0.82 -0.31 -0.45 0.07 0.07 0.07 0.34 0.15 0.5 0.07 -0.08 0.17 0.2 0.1 0.49 -0.28 -0.34 1.22 -0.06 0.56 0.21 0.41 0.32 -0.31 0.34 -0.32 0.01 -0.1 0.74 -0.12 -0.45 -0.45 0.07 0.07 0.07 0.07 -0.11 0.22 0.09 -1.21 -1.51 -1.15 -1.71 -1.88 -0.98 -0.1 -0.12 0.8 0.32 0.19 -0.25 0.24 0.78 0.96 1.35 1.14 0.84 -0.97 -1.22 -1.07 -1.35 -1.29 -0.87 -0.18 -0.13 0.33 -0.28 0.05 0.04 1.77 0 0.13 0.05 -0.32 0.09 -1.6 0.15 0.04 0.19 0.12 -0.39 -1.37 -1.37 0.42 -0.59 -0.12 0.44 0.43 0.21 0.14 0.2 0.07 0.64 0.07 0.72 0.78 -1.63 -0.61 0.32 -0.78 0.35 0.03 0.08 -0.26 0.31 -0.09 0.73 1.08 0.07 1.62 0.26 1.03 0.46 -0.43 0.07 0.02 0.21 0.38 NA -0.78 -0.98 0.07 -0.26 0.06 0.76 -0.07 -0.28 -0.12 -0.08 -0.13 0.04 0.07 0.07 0.88 0.5 0.88 0.76 At1g78490 263120_at CYP708A3 cytochrome P450 family protein 1






cytochrome P450 family 2.30 3.64
At1g57770 0.596
amine oxidase family, contains similarity to carotenoid isomerase (Lycopersicon esculentum), and to phytoene dehydrogenase (Cercospora nicotianae) 0.31 0.25 0.25 1.7 0.7 0.61 0.05 0.51 0.24 0.25 0.25 0.25 0.25 0.36 0.56 0.1 -0.17 0.15 0.19 0.44 0.47 0.27 0.59 -0.04 0.89 -0.2 -0.73 1.32 0.32 0.33 0.99 0.17 -2.49 0.31 0.33 0.03 0.07 0.25 0.25 0.25 0.25 0.25 0.25 0.71 0.25 -0.28 -2.43 -2.52 -1.14 -2.39 -2.35 -2.52 0.75 -1.47 0.22 -0.04 -0.6 0.36 0.63 -0.24 -0.31 -0.47 -0.33 0.25 -1.75 -0.99 -2.43 -2.25 -0.81 -1.28 -0.55 -0.14 0.3 -0.1 0.3 0.13 2.5 0.25 0.59 0.25 0.25 0.25 -0.28 1.13 0.25 0.25 0.25 0.06 -1.91 -1.91 0.67 0.37 0.56 -0.13 0.15 0.53 0.36 0.75 0.25 0.25 0.25 0.25 0.07 -1.7 0.24 0.08 -0.08 -0.12 -0.1 0.43 -0.17 0.57 0.15 -0.26 0.25 0.25 0.25 0.22 0.45 0.21 0.22 0.46 0.41 0.45 -0.04 0.52 0.06 0.03 0.25 -0.11 -0.04 -0.02 0.25 0.25 -0.65 -0.2 0.5 0.88 0.79 0.62 -1.65 1.92 0.42 -0.04 At1g57770 246411_at
amine oxidase family, contains similarity to carotenoid isomerase (Lycopersicon esculentum), and to phytoene dehydrogenase (Cercospora nicotianae) 2



Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Carotenoid biosynthesis
Carotenoid and abscisic acid metabolism | carotenid biosynthesis
3.08 5.03
At2g30860 0.570 ATGSTF9 Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002). 0.28 0.26 -0.4 1.29 0.03 0.14 0.01 0.27 0.72 0.15 0.12 0.04 -0.06 -0.17 0.03 0.31 0.59 0.35 0.37 0.23 0.06 0.44 0.46 0.5 -0.23 -0.2 -0.18 0 -0.1 0.1 0.07 -0.11 0.79 0.03 0.4 0.12 0.61 0.2 0 0.11 0.11 0.11 0.11 -0.06 0.44 1.02 -1.98 -1.91 -0.8 -0.33 -1.64 -1.64 0.28 0.27 0.34 0.26 0.34 0.17 0.27 0.28 0.25 0.39 0.38 0.72 -1.56 -1.12 -2.04 -2.39 -1.78 -0.97 0.41 0.34 0.14 0.1 -0.43 -0.1 -0.28 0.19 0.37 0.23 -0.16 -0.16 -0.69 -0.15 0.24 0.86 -0.09 0.38 -1.59 -1.26 0.03 0.48 0.05 0.13 0.23 0.06 0.36 0.83 0.03 0.16 -0.66 -0.16 0.18 -0.17 0.17 0.24 -0.16 0.18 0.32 0.25 -0.17 0.13 -0.12 0.19 0.42 -1.23 0.56 -0.07 -0.03 0.16 -0.05 -0.04 0.1 0.13 0.2 1.02 0.22 0.12 0.11 0.24 0.26 0.21 -0.04 0.09 0.31 0.52 0.42 0.63 -0.86 -0.18 0.28 -0.25 0.37 0.28 At2g30860 267153_at ATGSTF9 Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002). 2 toxin catabolism

Glutathione metabolism Biosynthesis of Amino Acids and Derivatives | Glutathione metabolism

Glutathione S-transferase, Phi family 2.30 3.68
At1g07770 0.567 RPS15A 40S ribosomal protein S15A -0.06 0.32 0.08 0.28 -0.06 0.19 -0.22 0.32 0.28 0.09 0.25 0.1 -0.05 0.27 0.41 0.21 0.26 0.26 0.25 -0.11 0 0.24 -0.32 0.05 0.8 0.07 -0.12 0.08 0.12 -0.13 0.05 -0.33 -0.52 -0.19 0.14 0.02 0.16 0.14 0.01 0.06 0.06 0.06 0.06 -0.68 -0.02 0.12 -1.08 -0.15 -0.55 -0.16 -0.73 -0.78 -0.02 -0.36 -0.38 0.07 0.11 -0.06 0.16 0.11 -0.05 0.08 -0.08 0.17 -0.52 -0.47 -0.71 -0.81 -0.64 -0.44 0.28 -0.13 0.11 -0.18 -0.07 -0.01 0.23 0.41 0.39 0.22 0.13 -0.19 -0.37 -0.4 0.13 0.47 -0.27 -0.16 -0.89 -1.11 0.1 0.49 0.18 0.04 0.34 0.04 0.16 0.35 -0.36 0.24 -0.27 -0.21 0.02 -0.28 0.24 0.19 0.31 -0.11 0.17 0.07 0.13 -0.01 0.15 0.14 0.28 -0.1 0.32 -0.03 0.17 0.09 -0.01 0.07 -0.02 0.17 0.12 0.01 0.07 0.04 0.06 0.27 0.14 0.63 0.2 0.13 -0.05 0.16 0.26 0.21 0.03 0.01 0.05 0.12 0.1 0.06 At1g07770 261416_at RPS15A 40S ribosomal protein S15A 6


Ribosome



1.03 1.91
At4g15210 0.563 ATBETA-AMY cytosolic beta-amylase expressed in rosette leaves and inducible by sugar. RAM1 mutants have reduced beta amylase in leaves and stems. 0.11 0.11 0.11 0.11 0.11 0.11 0.11 0.56 0.85 0.11 0.11 0.11 0.11 -0.74 0.28 -0.77 -0.28 -1.05 -0.77 -3.71 0.11 1.64 1.09 0.11 5.6 0.11 0.11 1.06 0.11 0.11 0.11 0.11 0.11 0.11 0.11 0.4 0.46 0.11 0.11 0.11 0.11 0.11 0.11 0.11 0.11 0.19 -3.55 -3.81 -3.4 -4.68 -3.59 -3.48 -2.17 0.11 0.11 0.11 0.11 -0.5 -0.19 1.86 1.64 2.31 2.04 2.21 -3.55 -3.41 -3.4 -3.73 -3.59 -3.33 -1.41 0.85 -0.16 0.11 0.11 0.11 1.63 1.5 0.49 3.09 1.26 -0.04 0.11 0.11 0.11 -1.77 0.06 0.11 0.11 0.11 -0.7 -0.51 1.35 0.63 0.65 0.12 1.15 3.21 0.11 0.11 0.11 0.11 3.44 0.11 0.11 0.09 0.61 1.35 0.11 0.11 0.11 0.11 0.11 0.11 0.11 0.11 0.11 0.11 0.11 2.16 -1.03 0.11 2.04 0.11 0.11 -7.33 0.11 0.11 0.11 0.11 0.11 -0.85 -0.23 -0.86 1.31 2.75 0.47 0.17 0.11 0.11 2.24 2.21 2.04 1.63 At4g15210 245275_at ATBETA-AMY cytosolic beta-amylase expressed in rosette leaves and inducible by sugar. RAM1 mutants have reduced beta amylase in leaves and stems. 10 beta-amylase activity | starch catabolism C-compound and carbohydrate utilization | metabolism of energy reserves (e.g. glycogen, trehalose) starch degradation Starch and sucrose metabolism Cell Wall Carbohydrate Metabolism | starch metabolism


5.76 12.93
At5g47990 0.558 CYP705A5 cytochrome P450 family protein -0.81 0.25 0.25 2.14 0.22 0.03 0.25 0.25 0.25 0.47 0.25 0.25 -0.56 0.25 0.25 0.25 0.25 0.25 0.25 0.25 0.25 -2.15 -4.78 0.92 0.25 0 0.84 0.91 -1.08 -0.24 -1.3 0.25 0.25 0.78 0.38 0.25 0.25 -0.76 -0.71 0.25 0.25 0.25 0.25 0.25 0.25 0.25 -2.65 -2.6 -3.62 -1.88 -2.06 -1.63 0.04 0.25 0.25 0.75 1.03 0.4 0.4 0.25 0.25 0.18 0.25 3.07 -1.91 -2.9 -2.96 -2.5 -2.91 -2.68 0.7 0.25 0.25 0.74 0.44 -0.74 -0.23 0.25 0.25 0.25 1.29 0.11 -0.39 -1.34 0.47 -2.62 1.72 0.37 -1.89 -1.48 0.25 0.25 0.25 0.25 0.25 0.25 0.25 0.25 -0.01 0.98 0.19 1.49 0.25 -1.45 0.25 0.25 0.44 0.25 0.25 0.25 -0.5 0.11 -0.39 -2.04 0.75 0.25 1.49 0.25 2.2 0.25 0.25 0.25 0.61 0.25 -0.2 2.72 0.93 0.92 2.11 NA 0.25 0.25 0.25 0.25 0.25 0.25 0.25 0.25 -0.45 0.71 1.44 0.87 1.76 1.8 At5g47990 248727_at CYP705A5 cytochrome P450 family protein 1
detoxification | detoxification involving cytochrome P450




cytochrome P450 family 4.31 7.86
At5g42600 0.556
similar to pentacyclic triterpene synthase 0.11 0.11 0.11 0.11 0.11 -0.92 0.11 0.11 0.11 0.11 -3.99 -3.25 0.11 0.11 0.11 0.11 0.11 0.11 0.11 0.11 0.11 0.11 -1.86 0.11 0.11 0.14 1.07 4.21 0.11 0.11 0.11 0.11 0.11 0.11 0.11 0.11 0.11 0.11 0.11 0.11 0.11 0.11 0.11 0.11 0.11 0.11 -3.66 -3.85 -4.01 -3.44 -4.66 -4.65 0.11 0.11 0.11 3.69 4.09 0.11 0.11 0.11 0.11 0.11 0.11 0.11 -3.66 -3.68 -4.01 -4.28 -4.66 -4.58 0.11 0.11 0.11 0.11 0.11 0.11 0.11 0.11 0.11 0.11 2.1 1.38 0.11 0.11 0.67 0.11 5.39 0.11 0.11 0.11 0.11 0.11 0.11 0.11 0.11 0.11 0.11 0.11 0.11 0.11 3.17 5.14 0.11 0.11 0.11 0.11 0.11 0.11 0.11 0.11 0.11 0.11 0.11 0.11 2.24 0.11 8.27 0.11 0.11 0.11 0.11 0.11 0.11 0.11 0.11 -1.22 0.11 0.11 0.11 0.11 0.11 0.11 0.11 0.11 0.11 0.11 0.11 0.11 0.11 0.11 1.31 1.28 1.5 2.77 At5g42600 249205_at
similar to pentacyclic triterpene synthase 7 pentacyclic triterpenoid biosynthesis lipid, fatty acid and isoprenoid biosynthesis
Biosynthesis of steroids

triterpene, sterol, and brassinosteroid metabolism | triterpene biosynthesis triterpene synthase 6.65 12.93
At5g23010 0.552 MAM1 methylthioalkylmalate synthase (MAM) involved in the chain elongation of methionine controlling the variation in glucosinolate biosynthesis. Also is characterized as 2-isopropylmalate synthase (IMS3), the first enzyme in the leucine biosynthetic pathway. -0.35 1.08 0.2 0.2 0.2 0.33 0.22 0.2 2.02 0.17 -0.16 -0.13 0.39 0.2 0.5 0.2 -0.56 0.2 0.32 0.78 0.24 0.75 0.67 0.56 -2 0.16 0 0.14 0.55 0 0.38 0.23 0.33 0.12 0.06 0.2 2.6 0.2 0.35 0.2 0.2 0.2 0.2 -0.84 2.14 3.27 -1.89 -1.62 -1.99 -1.81 -1.68 -1.5 0.21 -0.24 -0.21 0.44 0.31 0.25 0.59 -0.32 0.9 0.98 3.36 0.2 -3.09 -3.03 -3.21 -2.88 -3.06 -2.85 -0.75 -0.09 0.36 -1.63 -1.07 -0.48 -0.67 -0.24 0.45 0.72 0.64 0.91 0.2 0.2 0.62 -0.56 -0.1 0.61 -3.62 -3.62 0.2 -1.39 -0.09 1.8 1.08 1.34 0.96 0.87 0.2 -1.07 0.2 1.23 0.19 0.2 0.2 0.47 -1.1 0.37 -0.23 0.3 -0.76 0.27 -0.22 0.44 0.8 0.2 2.59 0.33 0.4 0.26 -0.6 0.15 0.23 0.32 0.32 2.67 -0.22 -1.1 0.2 -1.78 -0.42 -0.62 1.69 0.2 -1.36 -0.74 0.2 2.5 0.2 0.2 0.56 0.06 0.8 -0.07 At5g23010 249866_at MAM1 methylthioalkylmalate synthase (MAM) involved in the chain elongation of methionine controlling the variation in glucosinolate biosynthesis. Also is characterized as 2-isopropylmalate synthase (IMS3), the first enzyme in the leucine biosynthetic pathway. 10 glucosinolate biosynthesis | transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer | 2-isopropylmalate synthase activity
homomethionine biosynthesis | leucine biosynthesis Pyruvate metabolism | Valine, leucine and isoleucine biosynthesis Biosynthesis of Amino Acids and Derivatives | Branched-chain amino acids from aspartate
Glucosinolate Metabolism
4.71 6.98
At5g38020 0.550
S-adenosyl-L-methionine:carboxyl methyltransferase family protein, similar to SAM:salicylic acid carboxyl methyltransferase (SAMT) (Clarkia breweri) and to SAM:benzoic acid carboxyl methyltransferase (BAMT) (Antirrhinum majus) 0.1 -0.1 0.14 0.08 0.17 0.33 0.96 0.37 0.25 -0.01 -0.2 0.35 -0.18 0.37 0.25 0.37 0.25 0.37 0.25 0.25 0.25 -0.67 -2.2 0.54 0.25 -0.62 0.64 -0.09 -0.04 0.4 -0.05 0.25 0.25 0.24 0.04 0.37 0.25 -0.63 -0.59 0.25 0.25 0.25 0.25 0.25 0.25 0.25 -2.5 -3.03 -2.79 -2.95 -2.9 -2.57 -0.33 1.3 0.25 -0.46 -0.38 0.03 0.83 0.25 0.93 0.25 -0.43 0.75 -2.5 -2.65 -2.79 -2.35 -2.87 -2.97 -0.52 0.25 0.25 2.74 2.1 0.33 -0.11 0.25 0.25 0.25 0.24 1.82 0.25 0.15 -0.19 -1.46 0.26 -0.24 -0.24 -0.24 0.37 0.25 0.25 0.93 0.25 0.25 0.54 0.77 0.1 0.64 -0.28 -0.48 2.38 1.31 -0.71 0.25 0.25 0.25 0.25 0.26 -0.67 0.38 0.31 -0.14 0.46 -0.1 1.13 1.12 1.72 0.9 0.25 0.83 0.19 -0.26 0.4 4.29 -1.46 -1.48 0.25 0.25 -0.21 0.25 -0.34 0.3 0.25 0.25 0.37 0.25 -0.4 0.32 0.73 0.28 0.87 -0.11 At5g38020 249567_at
S-adenosyl-L-methionine:carboxyl methyltransferase family protein, similar to SAM:salicylic acid carboxyl methyltransferase (SAMT) (Clarkia breweri) and to SAM:benzoic acid carboxyl methyltransferase (BAMT) (Antirrhinum majus) 2
secondary metabolism




Methyltransferase, SABATH family 3.92 7.32
At2g34490 0.543 CYP710A2 cytochrome P450 family protein, similar to Cytochrome P450 61 (C-22 sterol desaturase) (Saccharomyces cerevisiae) -0.05 0.12 0.12 1.31 0.12 0.11 0.02 0.37 -0.55 0.09 0.09 0.19 0.53 -0.95 -0.35 -0.42 0.2 0.11 0.8 -0.17 0.12 1.08 1.12 0.2 1.7 -0.14 0.22 -0.02 0.39 0.24 -0.09 -0.48 0.55 0.13 -0.11 -0.33 0.26 -0.79 -0.15 0.12 0.12 0.12 0.12 0.24 -0.06 0.27 -0.46 -0.81 -1.15 -1.17 -0.69 -0.67 -0.26 0.01 -0.52 0.35 0.37 0.2 0.72 2.02 1.99 2.04 1.99 1.02 -0.11 -0.03 -0.62 -0.41 -0.66 -0.66 0 -0.14 0.65 0.3 -0.2 -0.18 -0.28 -0.77 1.03 0.13 -0.46 -0.08 -1.96 0.41 0.03 -0.81 0.24 -0.18 -2.68 -2.68 -0.3 -0.08 -0.53 -0.45 0 -0.37 0.27 0.71 -0.56 0.7 -1.64 -1.03 1.45 0.12 -1.04 0.59 -0.59 0.16 -0.27 -0.04 -0.57 0.1 0.13 -0.09 0.54 0.12 0.74 0.28 1.22 -0.35 -0.44 -0.11 0.18 0.04 0.5 NA 0.08 -0.33 0.12 -0.08 -0.86 0.21 0.51 0.32 0.71 0.87 -0.13 0.37 0.12 -0.71 -0.34 -0.47 -0.49 -0.67 At2g34490 266996_at CYP710A2 cytochrome P450 family protein, similar to Cytochrome P450 61 (C-22 sterol desaturase) (Saccharomyces cerevisiae) 1






cytochrome P450 family 2.23 4.73
At3g18740 0.542 RPL30C 60S ribosomal protein L30 (RPL30C) -0.12 -0.02 -0.07 -0.56 -0.04 0.14 -0.02 0.18 0.05 0.09 0.22 0.1 -0.15 0.14 0.24 0.1 0.17 0.18 0 0.06 0.1 0.47 -0.25 -0.1 0.65 -0.03 -0.14 -0.04 0.09 -0.11 0.04 -0.34 -0.32 -0.27 0 -0.07 -0.15 0.06 -0.06 0.05 0.05 0.05 0.05 -0.22 0.33 0.11 -1.12 -0.75 -0.11 -0.19 -0.71 -0.96 -0.12 0.04 -0.14 0.05 0.13 0.1 0.15 0.03 -0.02 -0.05 -0.01 -0.25 -1.06 -0.83 -1.01 -1.48 -1.12 -0.73 0.25 -0.21 0.14 -0.03 -0.11 0.19 0.31 0.46 0.41 0.19 -0.04 -0.44 -0.47 -0.26 0.1 0.32 0.12 -0.06 -0.51 -0.55 0.07 0.2 0.06 -0.05 0.18 0.13 0.14 0.4 0.28 0.61 0.34 0.75 0.24 0.09 0.62 0.07 0.74 0.15 -0.03 0.17 -0.08 0.15 0.28 0.19 0.28 -0.22 0.37 -0.16 -0.23 0.28 0.28 -0.12 0.09 0.06 0.1 0.53 0.16 0.06 0.05 0.28 0.15 0.69 0.17 0.28 -0.22 -0.07 0.22 0.11 -0.01 -0.02 0.32 0.06 0.35 0.08 At3g18740 257753_at RPL30C 60S ribosomal protein L30 (RPL30C) 6


Ribosome



1.22 2.23
At4g09320 0.537 NDPK1 nucleoside diphosphate kinase 1 -0.01 0.11 -0.17 0.19 0.15 0.16 0.21 0.34 0.45 0.22 0.05 0.14 -0.15 0.45 0.55 0.3 0.48 0.33 0.28 0.35 0.3 0.5 -0.06 0.13 0.51 0.2 -0.1 0.03 0.07 -0.11 0.05 -0.34 -0.08 -0.3 0.36 -0.06 0.11 0.08 -0.21 0.11 0.11 0.11 0.11 -0.37 0.2 0.11 -1.32 -1.39 -0.76 -0.43 -1.22 -1.52 0.42 0.01 -0.2 0.24 0.25 -0.02 0.21 0.03 -0.08 0.03 -0.06 -0.18 -1.76 -1.4 -1.65 -2.29 -1.71 -1.19 0.56 0.03 0.04 0.36 0.14 0.28 0.27 0.62 0.66 0.56 0.04 0.01 -0.59 -0.28 0.15 0.62 -0.43 0.09 -0.48 -0.52 0.28 0.45 0.1 -0.01 0.22 0.14 0.26 0.49 -0.22 0.57 -0.3 -0.01 -0.08 -0.12 0.33 0.09 0.7 0.23 0.25 0.22 0.07 0.06 0.38 0.13 0.28 -0.28 0.34 -0.17 -0.15 0.15 0.15 0.02 -0.01 0.09 0.14 0.28 0.17 0.31 0.11 0.25 0.17 0.36 0.26 0.27 0.01 0.33 0.44 0.34 -0.28 -0.25 0.1 -0.02 0.14 0.16 At4g09320 255089_at NDPK1 nucleoside diphosphate kinase 1 6
pyrimidine nucleotide metabolism de novo biosynthesis of purine nucleotides I | de novo biosynthesis of pyrimidine ribonucleotides Nucleotide Metabolism | Purine metabolism | Pyrimidine metabolism



1.85 3.00
At5g05960 0.537
protease inhibitor/seed storage/lipid transfer protein (LTP) family protein -0.32 0.1 -0.16 -0.12 0.36 0.28 1.14 0.46 0.34 0.28 0.38 0.21 0.15 0.21 0.06 0.2 0.15 0.21 0.32 0.14 -0.38 -0.82 -1.07 0.28 2.58 -0.05 0.09 -0.01 0.11 -0.04 0.49 -0.41 -0.22 0.03 0.11 0.14 0.32 -0.06 -0.33 0.11 0.11 0.11 0.11 -1.08 -0.4 0.34 -0.41 -0.42 -0.54 -0.4 -0.47 -0.27 0.24 0.12 -0.27 0.19 0.38 0.21 0.52 0.19 0.93 0.38 1.82 0.52 -0.43 -0.28 -0.52 -0.48 -0.61 -0.45 0.27 0.39 0.26 0.23 -0.14 0.06 0.7 1.51 -0.06 0.19 0.19 0.61 -0.72 0.22 0.27 -0.3 -0.84 -1.11 -3.67 -3.82 0.34 -0.27 -0.61 0.87 0.03 0.56 0.18 -0.03 -0.81 1.17 -1.65 0.27 0.51 -0.31 -0.48 0.66 -1.36 0.82 0.38 0.63 0.13 0.01 -0.03 0.72 0.31 -0.07 0.54 0.4 0.26 0.46 -1.39 0.05 -0.12 0.17 0.15 0.56 -1.04 -0.75 0.11 -0.47 0.02 0.55 0.28 0.2 -0.1 0.05 0.08 0.32 0.37 -0.62 -0.26 0.05 0.19 -0.72 At5g05960 250764_at
protease inhibitor/seed storage/lipid transfer protein (LTP) family protein 2




Miscellaneous acyl lipid metabolism

1.87 6.40
AtCg00480 0.532 ATPB chloroplast-encoded gene for beta subunit of ATP synthase 0.21 0.17 0.11 0.49 0.34 0.38 0.15 0.82 0.67 -0.22 1.23 0.24 0.13 0.51 0.62 0.51 0.62 0.55 0.6 0.21 0.05 -0.04 0.28 0.22 0.01 0.3 0.08 0.14 0.06 -0.01 0.19 0.39 0.51 -0.33 0.7 0.3 0.43 0.43 0.79 0.22 0.22 0.22 0.22 -0.24 0.22 0.36 -5.73 -5.19 -1.76 -1.71 -4.67 -5.51 -0.09 -0.18 0.42 0.22 0.35 0.24 0.31 0.36 0.14 0.31 0.38 0.61 -1.44 -0.88 -2.69 -4.57 -3.33 -1.9 0.18 0.37 0.41 0.79 -0.21 0.04 0.19 0.45 0.25 0.46 0.34 0.21 0.28 0.77 0.28 0.79 0.02 0.26 0.2 0.1 0.64 0.66 0.24 0.07 0.3 0.31 0.28 0.57 0.51 0.11 0.69 0.61 -0.22 0.17 0.42 0.1 -0.42 0.1 0.32 0.28 -0.35 0.31 0.62 0.35 0.32 0.33 0.6 -0.1 0.2 0.22 0.21 0.1 0.03 0.19 0.08 1.64 0.02 0.53 0.22 0.1 0.36 0.18 0.45 0.59 0.23 0.53 0.66 0.53 0.32 0.46 0.27 -0.62 0.35 0.34 AtCg00480 245014_at ATPB chloroplast-encoded gene for beta subunit of ATP synthase 10 proton-transporting ATP synthase, catalytic core (sensu Eukaryota) | hydrogen ion transporter activity | ATP synthesis coupled proton transport


Photosystems | additional photosystem II components | ATP synthase components


2.58 7.37
At1g62800 0.530 ASP4 aspartate aminotransferase (Asp4) / cytoplasmic isozyme 2 / transaminase A (ASP4) -0.3 -0.01 -0.01 1.24 0.14 -0.01 0.83 0.18 0.06 -0.02 -0.06 0.06 0.05 0.28 -0.01 0.44 -0.3 0.25 0.18 -0.09 0.06 0.53 -0.51 -0.05 -0.69 -0.19 -0.34 -0.26 0.07 -0.08 -0.05 1 -0.01 -0.04 -0.6 0.18 0.15 -0.17 -0.32 -0.01 -0.01 -0.01 -0.01 -0.26 0.35 1.03 -0.61 -0.85 -0.78 -1.3 -0.59 -0.48 -0.27 -0.23 -0.01 0.01 0.09 -0.13 0.16 2.04 3.13 1.63 1.86 1.11 -0.72 -0.78 -0.52 -0.66 -0.9 -0.65 -0.28 0.05 0 -0.24 -0.11 -0.85 -0.33 0.54 0.6 -0.03 0.1 -0.33 -0.99 -0.3 0.02 -0.52 -0.08 0.48 -2.11 -2.11 0.22 -0.01 0.1 1.48 -0.1 0.25 0.5 0.36 -0.18 0.45 -0.27 -0.05 0.1 0.71 -0.22 0.47 -0.62 -0.65 0.13 0.15 -0.1 -0.33 -0.12 0.2 0.04 -0.01 0.25 0.12 1.56 0.12 0.5 -0.22 -0.37 -0.08 0.36 -0.33 0.38 -0.18 -0.01 -0.16 -0.55 -0.47 -0.22 -0.34 0.16 0.28 0.44 0.33 -0.41 -0.53 -0.28 0.41 -0.01 -0.05 At1g62800 262646_at ASP4 aspartate aminotransferase (Asp4) / cytoplasmic isozyme 2 / transaminase A (ASP4) 6

asparagine biosynthesis I | aspartate biosynthesis and degradation | histidine biosynthesis I | asparagine degradation I | aspartate degradation I | aspartate degradation II | glutamine degradation III Carbon fixation | Glutamate metabolism | Alanine and aspartate metabolism | Cysteine metabolism | Arginine and proline metabolism | Tyrosine metabolism | Phenylalanine, tyrosine and tryptophan biosynthesis | Alkaloid biosynthesis I | Novobiocin biosynthesis | Phenylalanine metabolism



1.88 5.23
At1g48420 0.529
desulfhydrase family, similar to similar to D-cysteine desulfhydrase (Escherichia coli O6) 0.12 -0.04 0.05 -0.06 0.17 0.03 0.2 0.18 0.06 -0.05 0.05 0.05 0.14 0.1 -0.22 0.2 0.07 0.21 0.12 0.05 0.13 0.64 0.22 0.11 -0.26 -0.02 0.05 0.06 -0.04 0.03 0.09 0.03 0.05 -0.02 -0.14 0.07 -0.19 0.02 -0.02 0.01 0.01 0.01 0.01 -0.13 0.12 -0.05 -0.21 -0.32 -0.21 -0.25 -0.11 -0.12 0.39 -0.11 0.37 0.13 0.27 0.15 0.16 0.07 0.18 0.18 0.14 0.53 -0.48 -0.51 -0.41 -0.45 -0.32 -0.36 -0.26 0.2 0.15 0.08 -0.14 -0.02 0.11 0.57 -0.09 -0.59 0.05 0.28 -0.61 -0.03 0 0.05 -0.17 0.01 -1.29 -0.95 0.04 -0.17 -0.12 0.19 0.09 0.08 0.07 0.1 0.15 0.25 0.41 0.34 -0.27 -0.18 0.03 0.02 -0.65 -0.02 -0.27 0.07 -0.16 -0.12 -0.36 0 0.3 -0.15 0.86 0.15 0.78 0.19 0.3 -0.12 0.09 0.01 0.2 0 0.13 0.12 0.01 0.09 -0.24 -0.38 -0.28 -0.27 0.3 0.13 0.19 -0.08 0.18 -0.06 -0.19 0.15 0.02 -0.28 At1g48420 262247_at
desulfhydrase family, similar to similar to D-cysteine desulfhydrase (Escherichia coli O6) 2







0.80 2.15
At5g42580 0.529 CYP705A12 cytochrome P450 family protein 0 0 0 0 -0.01 -0.26 -0.7 -0.07 0 0.23 -0.31 0.14 0.04 -0.07 0.03 -0.07 0 -0.16 -0.05 0 0 -0.19 -2.09 0 0 -0.14 0.7 0.97 0.66 0.27 -1.76 0 0 0.55 0.66 -0.17 0 -0.96 0.1 0 0 0 0 0.49 0 0 -1.19 -2.63 -2.13 -1.49 -1.97 -2.81 -0.06 1.01 0 0.32 0.56 -0.56 -0.51 -0.14 0 0 0.38 0 -2 -2.17 -1.64 -2.2 -2.46 -1.27 -0.22 -0.15 0 0.24 0.65 -0.17 0 -0.42 -0.87 1.12 1.47 0.28 0 0 0.53 -1.72 2.24 0.52 0 1.43 -0.07 0 0 0 0 0.38 0.38 -0.02 0.34 1.77 2.31 3.39 0 0 -0.86 0 0 0.44 0.14 0 0.09 0.44 0 0 0.81 0 3.44 0 0 -0.06 -0.06 0 -0.72 0.27 -0.72 -0.13 -1.2 0.85 0 NA 0 0.36 0 0 0 -0.02 -0.07 0 0 0.34 1.66 2.08 2.27 2.23 At5g42580 249202_at CYP705A12 cytochrome P450 family protein 1






cytochrome P450 family 3.76 6.25
At1g67090 0.527 RBCS-1A ribulose bisphosphate carboxylase small chain 1A / RuBisCO small subunit 1A (RBCS-1A) (ATS1A) 0.36 0.96 0.9 1.73 0.32 0.3 0.3 0.59 0.91 -0.28 1.3 -0.05 -0.43 0.35 0.89 0.5 0.9 0.56 0.75 0.23 0.1 0.36 0.24 0.38 0.22 0.48 -0.07 0.21 -0.08 -0.03 0.21 0.21 0.28 -0.53 0.83 0.19 0.57 0.43 0.9 0.26 0.26 0.26 0.26 -0.1 0.48 0.42 -6.5 -3 -3.87 -3.35 -4.51 -4.48 1.02 -0.17 0.13 0.3 0.41 0.38 0.37 0.64 0.24 0.18 0.34 1.52 -3.7 -4.68 -4.48 -3.4 -5.43 -3.9 3.09 0.39 0.39 0.62 -0.23 0.71 0.3 0.52 0.53 0.56 0.23 -0.08 0.28 0.25 -0.72 0.77 0.3 0.31 0.28 0.16 0.66 0.8 0.47 -0.05 0.2 0.32 0.38 0.78 0.39 0.38 0.48 0.37 -0.03 0.22 0.52 0.09 -0.35 0.13 0.36 0.34 0.28 0.26 0.78 0.21 0.1 0.63 -0.2 -0.01 0.36 0.25 0.19 0.21 0.02 0.26 0.12 2.97 -0.08 0.73 0.26 0.13 0.22 0.07 0.54 0.66 0.28 0.69 0.65 0.64 0.28 0.65 0.37 -0.39 0.5 0.38 At1g67090 264474_s_at RBCS-1A ribulose bisphosphate carboxylase small chain 1A / RuBisCO small subunit 1A (RBCS-1A) (ATS1A) 10
C-compound and carbohydrate metabolism | glycolysis and gluconeogenesis | photosynthesis Calvin cycle Glyoxylate and dicarboxylate metabolism | Carbon fixation Intermediary Carbon Metabolism


4.75 9.59
At5g42590 0.526 CYP71A16 cytochrome P450 family protein 0.21 0.21 0.21 0.21 0.12 0.13 0.21 0.21 0.21 0.77 -0.22 -0.09 1.37 0.21 0.21 0.21 0.21 0.21 0.21 0.21 0.21 -0.62 -3.59 -0.05 0.21 -0.02 0.52 0.75 0.21 0.21 -2.27 0.21 0.21 2.63 0.36 0.21 0.21 -2.08 -2.08 0.21 0.21 0.21 0.21 0.21 0.21 0.21 -2.96 -3.11 -3.06 -1.07 -3.71 -1.44 -1.51 0.21 0.21 1.04 0.95 0.21 1.13 0.21 0.21 0.21 0.21 0.21 -2.96 -3.02 -3.06 -3.27 -3.71 -3.86 1.45 0.21 0.21 0.21 0.21 0.53 0.21 0.21 0.21 0.21 1.31 0.83 0.21 0.21 0.56 -1.74 2.8 0.21 0.21 0.21 0.21 0.21 0.21 0.21 0.21 0.21 0.21 0.21 -1.26 -0.02 0.07 1.19 0.21 0.21 0.21 0.21 0.21 0.21 0.21 0.21 -0.6 -1.42 1.93 0.21 1.41 0.21 2.89 0.21 0.21 0.21 0.21 0.21 0.21 0.21 0.21 -0.24 2.45 0.56 0.21 0.21 0.21 0.21 0.21 0.21 0.21 0.21 0.21 0.21 -1.36 0.21 1.54 1.65 2.5 2.37 At5g42590 249203_at CYP71A16 cytochrome P450 family protein 1






cytochrome P450 family 4.69 6.75
At5g54770 0.526 THI1 Thiamine biosynthetic gene, has dual function in thiamine biosynthesis and mitochondrial DNA damage tolerance. 0.23 -0.32 -0.25 -0.42 0.12 0.11 0.22 0.85 0.59 -0.08 -0.27 -0.05 -0.52 0.13 0.56 0.62 0.52 0.5 0.46 0.07 -0.03 0.26 0.25 0.25 -0.17 0.12 0.06 -0.02 -0.18 -0.08 0.02 0.08 0.3 -0.4 0.55 0.12 0.28 0.48 0.34 0.11 0.11 0.11 0.11 0.08 -0.14 0.11 -1.61 -1.77 -0.89 -0.39 -1.54 -1.83 0.1 0.06 0.21 0.14 0.25 0.13 0.26 0.17 0.2 0.28 0.73 -0.4 -1.79 -1.34 -1.79 -1.97 -1.67 -0.93 0.51 0.26 0.22 0.06 -0.35 1.18 -0.18 0.43 0.39 0.14 0.12 0.24 -0.33 0.94 -0.53 0.34 -0.01 0.15 -0.88 -0.93 0.75 0.46 0.28 0.01 0.11 0.38 0.01 0.42 0.64 0.4 -0.44 -0.03 0.12 -0.28 -0.03 0.13 -0.53 -0.03 0.09 0.12 0.14 0.22 0.4 0.17 0.28 0.05 0.46 -0.19 0.01 0.12 -0.01 -0.03 0.05 0.07 0.02 1.87 -0.16 0.39 0.11 0.04 0 -0.18 -0.05 -0.19 0.39 0.52 0.43 0.37 0.23 0.22 -0.01 -0.6 0.06 0.04 At5g54770 248128_at THI1 Thiamine biosynthetic gene, has dual function in thiamine biosynthesis and mitochondrial DNA damage tolerance. 6 response to DNA damage stimulus | thiamin biosynthesis

Thiamine metabolism



2.12 3.85
At4g12330 0.523 CYP706A7 cytochrome P450 family protein 0.07 0.07 0.07 0.07 -0.78 0.01 0.07 -0.1 0.07 0.07 0.07 0.07 -0.43 0.07 0.07 0.07 0.07 0.07 0.07 0.07 0.07 1.7 -0.16 0.42 0.07 0.25 0.12 0.34 -0.15 -0.14 0.07 0.07 0.07 0.47 -0.43 0.07 0.07 0.07 0.07 0.07 0.07 0.07 0.07 -0.93 0.07 0.07 -1.5 -1.8 -1.62 -2.04 -0.82 -2.12 0.07 0.07 0.07 0.26 0.41 0.14 0.07 0.07 0.07 0.07 0.07 0.07 -1.5 0.07 -1.62 -0.76 -0.82 -2 0.07 0.07 0.07 0.07 0.07 0.5 0.07 0.07 0.07 0.07 0.07 0.07 0.07 0.07 -0.11 0.07 0.07 0.07 0.07 0.07 0.07 0.07 0.07 0.07 0.07 0.01 0.07 0.07 0.07 1.72 0.07 2.04 0.86 0.07 0.07 1.84 0.07 0.07 0.07 0.07 0.26 -0.14 0.92 1.15 0.22 0.07 0.2 0.07 0.07 -0.73 -0.73 0.07 0.07 0.07 0.07 0.19 -0.24 -0.43 0.07 0.19 0.07 0.07 0.07 0.07 0.07 0.07 0.07 0.07 -0.12 -0.11 1.14 0.03 0.22 0.28 At4g12330 254836_at CYP706A7 cytochrome P450 family protein 1
biosynthesis of secondary products derived from primary amino acids | biosynthesis of glycosinolates and derivatives




cytochrome P450 family 2.22 4.16
At4g37410 0.517 CYP81F4 cytochrome P450 family protein -0.05 2.19 0.18 4.2 0.21 0.22 -1.01 -0.93 0.18 0.3 0.38 0.16 0.16 -0.07 0.18 -0.37 0.18 1.07 0.18 0.18 0.18 -1.49 -2.87 0.36 0.18 -0.4 -0.02 -0.12 -1.22 -0.99 -0.38 0.18 0.18 0.09 0.27 0.48 0.18 -0.35 -0.22 0.18 0.18 0.18 0.18 0.18 0.18 0.18 -2.06 -1.86 -2.14 -1.54 -1.8 -1.15 -0.36 0.18 0.18 0.43 0.7 0.36 0.56 -0.04 0.55 0.57 1.12 3.67 -2.94 -2.67 -2.85 -2.57 -2.67 -2.58 -0.16 0.18 1.7 2 1.58 -0.16 0.18 0.18 0.18 0.18 0.27 1.79 -0.81 0.23 0.14 -2.11 0.45 0.44 -1.37 -2.02 -0.93 0.18 -0.15 0.18 0.45 0.52 2.38 1.9 -0.61 0.37 -1.41 -0.56 1.04 -0.26 0.85 0.18 0.18 0.18 0.62 1.19 -0.31 -0.02 0.07 0.02 0.27 0.18 0.84 0.67 1.21 -0.23 -1.35 0 0.26 0.13 0.28 3.61 -1.27 -0.59 0.18 -0.96 -0.4 1.3 0.18 0.18 1.94 0.18 0.9 0.18 -1.71 0.01 0.6 -0.23 0.65 0.25 At4g37410 253073_at CYP81F4 cytochrome P450 family protein 1






cytochrome P450 family 4.01 7.13
At1g52400 0.516 BGL1 encodes a member of glycosyl hydrolase family 1 1.14 -0.98 -0.28 3.21 0.27 0.28 -1.33 0.34 0.23 -1.1 0.21 0.31 -0.37 0.39 0.56 0.32 0.33 0.32 0.13 0.6 -0.19 0.8 0.57 0.56 -0.15 0.25 0.5 0.77 0.5 0.35 0 1.11 3.28 0.12 0.97 0.15 0.49 0.05 -1.43 0.14 0.14 0.14 0.14 -4.59 1.91 0.8 -1.92 -1.77 -2.29 -2.06 -1.43 -1.42 -0.34 0.43 1.61 1.42 1.33 0.11 0.32 -0.82 -0.64 -0.64 -0.45 -0.98 -4.01 -4.36 -4.3 -4.03 -4.32 -4 -1.04 -0.35 0.4 0.07 0.52 -0.59 0.42 -0.38 0.36 0.67 0.35 1.47 -0.14 0.14 -0.67 0.11 1.06 0.23 -0.36 -0.18 0.37 0.33 0.09 0.18 0.21 0.25 0.71 2.22 0.14 1.58 0.14 2.23 1.24 -1.09 -0.38 0.35 -0.56 0.76 -0.02 0.45 -1.81 0.06 -0.6 -0.08 0.14 0.06 0.14 0.74 0.65 0.59 0.14 0.48 0.02 0.53 0.23 4.87 -0.95 -1.2 0.14 -0.7 0.31 1.01 -0.08 0.26 0.13 0.67 0.66 0.35 0.14 -0.98 1.52 1.33 1.17 1.36 At1g52400 259640_at BGL1 encodes a member of glycosyl hydrolase family 1 1


Aminosugars metabolism | Nucleotide sugars metabolism | Glycan Biosynthesis and Metabolism


Glycoside Hydrolase, Family 1 3.83 9.46
At1g56070 0.515 LOS1 encodes a translation elongation factor 2-like protein that is involved in cold-induced translation. Mutations in this gene specifically blocks low temperature-induced transcription of cold-responsive genes but induces the expression of CBF genes and muta 0.3 0.17 -0.13 -0.45 0.22 0.19 0.11 0.34 0.23 -0.02 0.25 0.03 -0.13 0.27 0.21 0.27 0.2 0.23 0.11 0.13 0.1 0.26 -0.12 -0.09 0.5 0.02 -0.17 0.01 0.17 0.05 0.02 -0.19 -0.46 -0.13 0.2 -0.01 -0.15 0.11 0.05 0.09 0.09 0.09 0.09 0.16 0.31 0.1 -1.33 -0.96 -0.85 -0.16 -1.43 -1.4 0.26 -0.1 0.01 0.13 0.15 0.09 0.28 0.05 -0.07 0.02 0.01 -0.47 -1.41 -0.99 -1.45 -1.52 -1.44 -0.84 0.22 -0.12 0.22 0.18 -0.06 0.16 0.28 0.12 0.43 0.22 0.22 0.24 -0.33 0.03 0.09 0.55 0.18 0.02 -0.3 -0.07 0.2 0.26 0.21 0.01 0.18 0.09 0.15 0.42 -0.15 0.09 -0.32 0.18 0.23 0.02 0.24 0.14 0.57 0.12 0.12 0.14 0.15 0.18 0.35 0.05 0.21 0.22 0.3 -0.28 -0.37 0.11 -0.16 -0.09 0.08 0 0.08 0.54 0.17 0.3 0.09 0.22 0.25 0.33 0.47 0.25 0 0.3 0.34 0.16 0.12 0.16 0.02 -0.42 0.27 0.24 At1g56070 262064_at LOS1 encodes a translation elongation factor 2-like protein that is involved in cold-induced translation. Mutations in this gene specifically blocks low temperature-induced transcription of cold-responsive genes but induces the expression of CBF genes and muta 2.5 response to cold

Translation factors



1.34 2.10
At5g37990 0.515
S-adenosyl-L-methionine:carboxyl methyltransferase family protein, similar to defense-related protein cjs1 (Brassica carinata), caffeine synthase (Camellia sinensis), and SAM:jasmonic acid carboxyl methyltransferase 0.09 0.4 0.4 0.4 0.21 0.64 0.4 0.4 0.4 0.91 -0.2 0.73 0.23 0.4 0.4 0.4 0.4 0.4 0.4 0.4 0.4 -2.49 -2.46 0.33 0.4 -0.21 0.86 0.16 -0.26 0.57 -0.7 0.4 0.4 0.13 -0.15 0.4 0.4 -0.53 -0.24 0.4 0.4 0.4 0.4 0.4 0.4 0.4 -3.28 -3.89 -3.23 -3.63 -3.37 -2.91 0.17 0.4 0.4 0.23 0.6 2.37 1.87 0.4 0.4 0.4 0.4 0.4 -2.06 -3.08 -3.23 -3.36 -2.62 -2.64 -1.03 0.4 0.4 2.99 1.55 -0.01 0.4 0.4 0.4 0.4 0.26 3.06 0.4 0.4 0.11 -1.62 0.99 0.4 0.4 0.4 0.4 0.4 0.4 0.4 0.4 0.4 0.4 0.4 0.4 2.97 0.4 1.07 0.4 0.4 0.4 0.4 0.4 0.4 0.4 0.4 0.01 -0.12 0.25 0.2 0.4 0.4 0.4 0.63 1.42 0.4 0.4 0.54 0.88 0.6 0.86 -3.61 -3.95 -2.23 0.4 -0.43 0.4 0.4 0.4 0.4 0.4 0.4 0.4 0.4 0.4 0.4 0.07 -1.12 -0.14 -0.94 At5g37990 249599_at
S-adenosyl-L-methionine:carboxyl methyltransferase family protein, similar to defense-related protein cjs1 (Brassica carinata), caffeine synthase (Camellia sinensis), and SAM:jasmonic acid carboxyl methyltransferase 2






Methyltransferase, SABATH family 4.28 7.01
AtCg00470 0.507 ATPE ATPase epsilon subunit 0.02 0.03 -0.41 0.54 0.16 0.23 -0.04 0.37 0.38 -0.1 0.83 -0.1 0.2 0.21 0.47 0.27 0.28 0.31 0.31 0.07 -0.12 0.18 0.18 0.01 -0.14 0.1 -0.12 0.09 -0.11 -0.18 0.06 0.14 0.41 -0.44 0.47 -0.06 0.18 0.31 0.57 0.05 0.05 0.05 0.05 -0.2 0.03 0.06 -1.67 -2.15 -1.01 -0.81 -2.2 -3.28 0.05 -0.14 0.12 -0.01 0.23 0.07 0.05 0.35 -0.05 0.24 0.16 0.63 -1.04 -0.89 -1.08 -1.3 -1.46 -0.73 -0.15 0.2 0.2 0.42 -0.34 0 -0.04 0.18 0.38 0.39 -0.01 -0.16 0.13 0.44 0.15 0.44 0.04 0.08 0.09 0 0.28 0.39 0.02 -0.13 0.37 0.14 0.13 0.48 0.44 0.27 0.39 0.26 -0.12 0.09 0.36 0.01 -0.42 -0.05 0.13 0.08 -0.2 0.1 0.56 0.28 0.31 0.12 0.68 -0.26 0.07 0.08 0.03 -0.07 -0.05 0.07 -0.03 0.15 -0.09 0.37 0.05 0.07 0.2 -0.01 0.62 0.53 -0.12 0.3 0.38 0.3 0.05 0.44 0.17 -0.69 0.22 0.09 AtCg00470 245013_at ATPE ATPase epsilon subunit 6 hydrogen-translocating F-type ATPase complex | cellular respiration | hydrogen-transporting ATP synthase activity, rotational mechanism | ATP synthesis coupled proton transport (sensu Eukaryota)


Photosystems | additional photosystem II components | ATP synthase components


1.56 4.11
At1g78040 0.506
pollen Ole e 1 allergen and extensin family protein 0.05 0.36 0.14 0.87 0.01 0.06 -0.13 0.34 0.49 0.1 0.17 0.19 -0.16 0.25 0.27 0.28 0.36 0.31 0.37 -0.15 -0.14 0.08 -0.27 0.04 0.63 0.15 -0.02 0.05 0.04 -0.11 0.15 -0.26 -0.34 -0.35 0.39 0.16 0.23 -0.01 -0.24 0.05 0.05 0.05 0.05 -1.26 0.11 0.17 -0.77 -0.67 -0.24 -0.23 -0.64 -1.44 -0.05 -0.6 -0.37 0.1 0.27 0.11 0.11 0.11 0.04 0 0.12 0.89 -0.81 -0.66 -0.82 -1.18 -0.92 -0.61 0.13 0.25 -0.02 0.05 -0.19 -0.05 0.34 0.55 0.36 0.18 0.08 -0.11 0.12 -0.23 0.13 0.35 0.26 0.03 -0.9 -0.88 0.22 0.3 0.03 -0.03 0.11 0.03 0.1 0.43 0.03 0.32 -0.06 0.08 -0.17 0 0.25 -0.04 0.01 -0.13 0.2 -0.09 0.13 0.01 0.37 0.07 0.06 0.15 0.01 -0.18 0.02 0.1 0.12 -0.07 -0.06 0.07 0.05 0.14 -0.06 0.17 0.05 -0.09 -0.14 0.11 0.21 0.21 0.12 0.31 0.27 0.24 0.26 0.01 -0.07 -0.15 0.19 0.01 At1g78040 262195_at
pollen Ole e 1 allergen and extensin family protein 2

gluconeogenesis | glycerol degradation II | serine-isocitrate lyase pathway | formaldehyde assimilation I (serine pathway) | sorbitol fermentation | fructose degradation (anaerobic) | acetate fermentation | glycolysis I | glyceraldehyde 3-phosphate degradation | glycolysis IV




1.18 2.32
AtCg00340 0.505 PSAB Encodes the D1 subunit of photosystem I and II reaction centers. 0.16 -0.17 -0.3 0.93 0.33 0.4 0.23 0.71 0.74 -0.14 0.37 -0.05 -0.33 0.49 0.67 0.6 0.59 0.64 0.56 0.16 0.07 -0.4 0.57 0.2 -0.01 0.28 0 0.15 -0.06 -0.01 0.18 0.36 0.59 -0.47 0.56 0.19 0.32 0.63 0.88 0.2 0.2 0.2 0.2 -0.11 0.16 0.25 -5.76 -2.39 -1.35 -0.04 -3.78 -4.88 0.36 -0.09 0.22 0.09 0.22 0.48 0.42 0.38 0.01 0.3 0.2 0.85 -3.88 -2.34 -3.71 -5.49 -3.64 -1.48 0.55 0.34 0.35 0.62 -0.17 0.23 -0.11 0.2 0.24 0.38 0.24 0.17 0.33 0.96 0.23 0.92 0.26 0.33 0.15 -0.09 0.67 0.7 0.32 0.13 0.36 0.33 0.28 0.67 0.51 0.48 0.59 0.37 0 0.09 0.28 0.17 -0.88 0.07 0.24 0.19 0.4 0.35 0.73 0.22 0.24 0.86 0.81 -0.15 0.19 0.26 0.22 0.12 0.1 0.19 0.09 1.14 0.02 0.46 0.2 0.05 0.19 0.06 0.59 0.73 0.23 0.49 0.65 0.56 0.28 0.61 0.41 -0.16 0.26 0.43 AtCg00340 245006_at PSAB Encodes the D1 subunit of photosystem I and II reaction centers. 6 photosystem I reaction center | photosystem II reaction center | chlorophyll binding | photosynthesis light harvesting in photosystem I | photosynthesis light harvesting in photosystem II


Photosystems | Photosystem I | chlorophyll A apoprotein


3.18 6.91
At5g58390 0.504
peroxidase, putative 0.08 0.12 0.12 0.12 0.12 0.12 -0.28 0.12 -0.06 0.12 0.12 0.12 0.12 0.12 0.42 0.12 -1.38 0.12 -1.45 0.12 0.12 0.64 1.37 0.36 0.12 0.69 -0.59 0.12 2.52 2.21 -0.17 0.12 0.12 0.21 0.68 0.12 -1.58 0.12 0.12 0.12 0.12 0.12 0.12 -1.91 1.68 -0.55 -0.53 -0.56 -0.35 -0.26 -0.23 -0.84 0.33 -1.91 0.12 -0.01 -0.24 0.03 0.08 1.83 1.03 1.5 1.64 0.12 -1.51 -1.86 -2.58 -1.59 -1.69 -0.72 -2.1 0.12 0.12 0.14 -0.05 -0.93 0.12 0.12 0.12 0.23 -0.46 -0.36 0.12 0.12 0.12 0.46 0.11 -1.39 -2.97 -2.97 0.12 -1.54 0.26 0.67 0.54 0.33 0.12 -2.15 0.12 0.12 0.12 0.12 1.58 0.12 0.12 0.5 0.12 0.12 0.09 -0.08 1.46 0.41 -1.37 0.12 0.12 0.12 0.12 1.14 1.37 -0.69 -0.3 1 -0.16 0.72 0.56 1.1 -0.44 -0.59 0.12 0.12 0.07 0.86 0.12 0.12 0.12 0.45 0.12 -0.23 0.12 0.12 1.09 0.59 0.93 0.74 At5g58390 247812_at
peroxidase, putative 2


Methane metabolism | Prostaglandin and leukotriene metabolism | Phenylalanine metabolism | Stilbene, coumarine and lignin biosynthesis



3.28 5.49
At3g53190 0.503
pectate lyase family protein 0.42 -0.22 -0.22 0.73 0.15 0.12 -0.25 0.14 -0.09 -0.12 -0.03 0.02 -0.03 0.32 0.22 0.07 0.21 0.23 0.32 0.03 0.67 -0.34 -1.9 0.43 1.61 -0.05 0.02 0.01 0.32 -0.17 -0.12 -0.28 0.12 0.27 0.12 0.16 -0.53 -0.19 -0.52 0.04 0.04 0.04 0.04 -0.25 -0.07 -0.11 -0.61 -0.73 -1.07 -0.83 -0.53 -0.34 0.14 -0.41 -0.37 0.09 0.17 0.6 0.22 -0.09 -0.05 -0.18 -0.14 0.46 -0.83 -0.56 -0.37 -0.5 -0.47 -0.37 -0.14 -0.43 -0.02 -0.25 0.06 -0.61 1.38 1.12 0.49 0.41 0.5 0.17 -1.24 -0.04 0.21 -0.32 0.27 -0.26 -1.22 -0.9 0.25 0.55 0.08 0.14 0.04 -0.02 0.16 1.15 -0.37 -0.01 -0.74 -0.32 0.21 -0.09 -0.04 -0.19 0.11 -0.05 0.14 0.26 0 0.03 0.03 0.2 0.37 -0.22 0.55 0.11 1.69 -0.23 0.24 -0.34 -0.01 0.01 0.38 0.28 0.19 -0.14 0.04 0.78 -0.24 1.89 -0.21 -0.42 0.38 0.68 0.08 -0.04 -0.21 -0.36 -0.01 0.14 -0.49 -0.27 At3g53190 251982_at
pectate lyase family protein 4
C-compound, carbohydrate catabolism | sugar, glucoside, polyol and carboxylate catabolism

Cell Wall Carbohydrate Metabolism | pectin metabolism


1.46 3.79
At3g62870 0.503 RPL7aB 60S ribosomal protein L7A (RPL7aB) -0.01 0.18 -0.01 -0.21 0.12 0.06 -0.02 0.09 0.06 0.17 0.24 -0.17 -0.04 0.15 0.16 0.21 0.28 0.3 0.22 0.18 0.24 0.32 -0.34 -0.03 0.81 0.04 -0.03 0.28 0.14 -0.06 -0.06 -0.09 -0.85 -0.16 0.18 0.05 -0.01 0.2 0.15 0.07 0.07 0.07 0.07 -0.38 0.39 0.15 -1.03 -0.98 -0.17 -0.11 -0.79 -1.01 0.08 -0.27 -0.18 0.05 0.06 -0.01 0.07 0.03 -0.18 0.03 -0.03 -0.04 -0.87 -0.56 -0.73 -1.18 -0.87 -0.61 0.31 -0.38 -0.03 0.1 -0.1 0.17 0.67 0.55 -0.01 -0.17 0.15 -0.11 -0.7 -0.5 0.17 0.06 0.71 0.12 -0.7 -0.74 0.05 0.3 0.17 0 0.23 0.15 0.14 0.32 -0.19 0.31 0.1 0.28 0.15 0.1 0.43 -0.02 1.18 -0.14 0.01 0.12 0 0.03 0.25 -0.07 0.28 0.06 0.36 -0.15 -0.22 -0.02 0.09 0.02 0.08 0.01 0.17 1 0.16 0.2 0.07 -0.01 -0.04 0.56 -0.04 -0.05 -0.28 -0.05 0.27 0.15 -0.08 0.05 0.02 0.06 -0.16 0.15 At3g62870 251185_at RPL7aB 60S ribosomal protein L7A (RPL7aB) 6
protein synthesis | ribosome biogenesis
Ribosome



1.20 2.35
At2g18020 0.502
60S ribosomal protein L8 (RPL8A), 0.13 0.27 -0.1 -0.22 0.11 0.17 0.01 0.36 0.52 0.1 0.19 0.01 -0.11 0.52 0.65 0.41 0.66 0.49 0.51 0.12 0.08 0.43 -0.14 0.23 0.62 0 -0.25 0.02 0.04 -0.13 0.04 -0.37 -0.67 -0.28 0.28 0.07 0.21 0.07 0.06 0.1 0.1 0.1 0.1 -0.49 0.39 0.14 -1.51 -1.63 -0.77 -0.47 -1.19 -1.46 0.17 -0.22 -0.15 0.08 0.11 0.08 0.19 0.11 0.09 -0.04 0.18 -0.22 -1.91 -1.41 -2.14 -2.83 -1.69 -1.29 0.23 -0.03 0.1 0.28 -0.14 0.21 0.22 0.48 0.26 0.24 0.15 -0.11 -0.43 -0.19 0.18 0.74 -0.12 0.14 -0.09 -0.12 0.25 0.55 0.12 0.15 0.13 0.13 0.3 0.65 -0.16 0.21 -0.06 -0.09 -0.01 0.09 0.41 0.14 0.71 0.09 0.04 0.22 0.09 0.23 0.28 0.08 0.23 0.09 0.25 -0.07 -0.08 -0.05 -0.15 0.01 -0.09 0.17 0.02 1.63 -0.04 0.34 0.1 0.24 0.23 0.48 0.28 0.24 0.12 0.43 0.49 0.42 0.07 -0.11 0.3 -0.16 0.35 0.1 At2g18020 265805_s_at
60S ribosomal protein L8 (RPL8A), 6


Ribosome



1.94 4.46
At3g09260 0.501 PYK10 Encodes beta-glucosidase.The major constituent of ER bodies. One of the most abundant proteins in Arabidopsis seedlings -0.06 1.04 0.55 3.31 -0.03 0.04 0.23 -0.22 -0.09 -0.04 0.09 -0.12 -0.27 -0.22 -0.08 -0.47 -0.01 -0.3 -0.09 -0.09 -0.18 -0.43 -0.66 -0.08 2.11 -0.23 -0.2 -0.13 -0.31 -0.37 -0.08 -0.09 -0.09 -0.46 0.17 -0.41 -0.16 -0.2 -0.17 -0.09 -0.09 -0.09 -0.09 -0.09 -0.09 0.37 -1.23 -0.94 -0.8 -0.21 -1.37 -1.57 -0.08 1.43 -0.09 -0.06 0.03 -0.12 0.08 0.35 1.64 2.34 3.07 3.21 -1.5 -0.94 -1.66 -2.02 -1.75 -1.12 -0.14 -2.24 -0.47 0.02 -0.4 0.08 -1.06 -0.02 -0.09 -0.55 -0.17 -0.42 -0.15 0.02 0.24 0 -0.18 -0.04 -1.46 -1.56 -0.37 -0.05 0.04 0.62 0.37 0.54 0.45 0.66 0.21 0.22 0.18 0.4 3.03 -0.38 0.39 -0.09 -0.75 -0.13 0.08 -0.12 -0.51 -0.03 0.03 -0.19 0.06 0.46 0.11 -0.19 0.49 -0.12 -0.82 -0.09 -0.24 -0.04 -0.27 4.11 -0.26 0.06 -0.09 -0.28 -0.28 3.22 0.88 0.1 -0.23 0.55 -0.07 -0.09 -0.3 0.05 -0.04 -0.54 0.06 0.06 At3g09260 259009_at PYK10 Encodes beta-glucosidase.The major constituent of ER bodies. One of the most abundant proteins in Arabidopsis seedlings 4 beta-glucosidase activity





Glycoside Hydrolase, Family 1 3.49 6.34
At5g20290 0.501 RPS8A 40S ribosomal protein S8 (RPS8A) 0.28 0.17 -0.01 -0.24 0.11 0.23 0.3 0.36 0.6 0.09 0.5 0.16 0.11 0.51 0.68 0.36 0.63 0.47 0.56 0.1 0.21 0.35 0.05 0.25 1.23 0.2 -0.17 0.31 0.12 0.04 0.19 -0.46 -1.26 -0.26 0.75 0.13 0.33 0.35 0.34 0.17 0.17 0.17 0.17 -0.6 0.33 0.07 -1.53 -1.46 -1.02 -0.48 -1.75 -1.56 -0.04 -0.33 -0.56 0.27 0.28 0.2 0.21 0.23 0.03 0.4 0.1 -0.02 -2.75 -2.02 -2.33 -4.67 -2.16 -1.21 0.45 0.06 0.26 0.49 -0.01 0.34 -0.02 -0.37 -0.17 -0.53 -0.13 -0.23 -0.5 -0.25 0.22 0.9 -0.14 0.13 -0.54 -0.56 0.26 0.6 0.26 0.08 0.36 0.21 0.26 0.55 0.07 0.48 0.07 0.19 -0.11 -0.16 0.99 0.17 0.89 0.2 0.19 0.25 -0.13 0.18 0.54 0.24 0.4 0.1 0.42 -0.2 -0.11 0.23 0.28 0.07 0.14 0.16 0.13 1.28 0.14 0.56 0.17 0.31 -0.05 0.46 0.32 0.33 0.04 0.34 0.49 0.41 0.28 0.13 0.07 -0.23 0.33 0 At5g20290 246068_at RPS8A 40S ribosomal protein S8 (RPS8A) 6
protein synthesis | ribosome biogenesis
Ribosome



2.15 5.95



































































































































































page created by Juergen Ehlting 06/02/06