Co-Expression Analysis of: CYP708A3 (At1g78490) Institut de Biologie Moléculaire des Plantes

















































































































































































































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Stress Data Set save / view heatmap as: OpenOffice Table annotation details for co-expressed genes can be found to the right of the heatmap
































































































































































































































MS Excel table
































































































































































































































save / view all data as: Tab delimited table For further information on the experiments please go to the Genevestigator database using the experiment-ID given in brackets.





























































































































































































































shown are a maximum of 50 genes with r>0.5 (If more co-expressed genes with r>0.5 exist, they can be saved as Tab delimited data only) magnitude of change [log2(treatment / control)]    0   0.3   0.6   0.9  1.2   1.5   1.8   2.1   2.4   2.7   >3






















































































































































































































greater than zero                                                         


























































































































































































































less than zero                                                         


























































































































































































































Locus r-value Name Description Agrobacterium tumefaciens, tumor at stem (8) Myzus persicae, 8h, leaf (82) Gigaspora rosea, 3d, roots (23) Heterodera schachtii, 21d, roots (24) Pseudomonas syringae hrpA, 2h, Col5 leaf (71) P. syringae DC3000 avrRpm1, 4h, Col5 leaf (71) P. syringae DC3000, 4h, Col5 leaf (71) P. syringae hrpA, 4h, Col5 leaf (71) P. syringae DC3000, 12h, Col5 leaf (71) P. syringae hrpA, 12h, Col5 leaf (71) P. syringae DC3000, 2h, Col leaf (106) P. syringae DC3000, 6h, Col leaf (106) P. syringae DC3000, 24h, Col leaf (106) P. syringae avrRpm1, 2h, Col leaf (106) P. syringae avrRpm1, 6h, Col leaf (106) P. syringae avrRpm1, 24h, Col leaf (106) P. syringae HrcC, 2h, Col leaf (106) P. syringae HrcC, 6h, Col leaf (106) P. syringae HrcC, 24h, Col leaf (106) P. syringae pv. phaseolicola, 2h, Col leaf (106) P. syringae pv. phaseolicola, 6h, Col leaf (106) P. syringae pv. phaseolicola, 24h, Col leaf (106) P. syringae, resistant, 4h, Col leaf, uninfected half (148) P. syringae, resistant, 8h, Col leaf, uninfected half (148) P. syringae, resistant, 16h, Col leaf, uninfected half (148) P. syringae, resistant, 24h, Col leaf, uninfected half (148) P. syringae, resistant, 48h, Col leaf, uninfected half (148) P. syringae, susceptible, 4h, Col leaf, uninfected half (148) P. syringae, susceptible, 8h, Col leaf, uninfected half (148) P. syringae, susceptible, 16h, Col leaf, uninfected half (148) P. syringae, susceptible, 24h, Col leaf, uninfected half (148) P. syringae, susceptible, 48h, Col leaf, uninfected half (148) Erysiphe cichoracearum race UCSC, Col leaf (85) E. cichoracearum, 3h, Col leaf (86) E. cichoracearum, 10h, Col leaf (86) E. orontii, 6h, Col leaf (146) E. orontii, 12h, Col leaf (146) E. orontii, 18h, Col leaf (146) E. orontii, 24h, Col leaf (146) E. orontii, 48h, Col leaf (146) E. orontii, 72h, Col leaf (146) E. orontii, 96h, Col leaf (146) E. orontii, 120h, Col leaf (146) Botrytis cinerea, 18h, Col leaf (147) B. cinerea, 48h, Col leaf (147) Peronospora parasitica, resistant, 72h (72) P. parasitica, susceptible, 72h (72) Phytophtora infestans, 6h, Col seedling (108) P. infestans, 12h, Col seedling (108) P. infestans, 24h, Col seedling (108) elicitor flg22, Ler seedling (81) elicitor, control MgCl2, 1h, Col leaf (107) elicitor, control MgCl2, 4h, Col leaf (107) elicitor, GST, 1h, Col leaf (107) elicitor, GST, 4h, Col leaf (107) elicitor, hrpZ, 1h, Col leaf (107) elicitor, hrpZ, 4h, Col leaf (107) elicitor, GST NPP1, 1h, Col leaf (107) elicitor, GST NPP1, 4h, Col leaf (107) elicitor, flg22, 1h, Col leaf (107) elicitor, flg22, 4h, Col leaf (107) elicitor, LPS, 1h, Col leaf (107) elicitor, LPS, 4h, Col leaf (107) wounding, 15min, leaf (127) wounding, 30 min, leaf (127) wounding, 1h, leaf (127) wounding, 3h, leaf (127) wounding, 6h, leaf (127) wounding, 12h, leaf (127) wounding, 24h, leaf (127) wounding, 15min, root (127) wounding, 30 min, root (127) wounding, 1h, root (127) wounding, 3h, root (127) wounding, 6h, root (127) wounding, 12h, root (127) wounding, 24h, root (127) ozone, 1h, seedling (25) oxidative stress (paraquat), 30min, leaf (126) oxidative stress (paraquat), 1h, leaf (126) oxidative stress (paraquat), 3h, leaf (126) oxidative stress (paraquat), 6h, leaf (126) oxidative stress (paraquat), 12h, leaf (126) oxidative stress (paraquat), 24h, leaf (126) oxidative stress (paraquat), 30min, root (126) oxidative stress (paraquat), 1h, root (126) oxidative stress (paraquat), 3h, root (126) oxidative stress (paraquat), 6h, root (126) oxidative stress (paraquat), 12h, root (126) oxidative stress (paraquat), 24h, root (126) genotoxic stress (bleomycin), 30min, leaf (126) genotoxic stress (bleomycin), 1h, leaf (126) genotoxic stress (bleomycin), 3h, leaf (126) genotoxic stress (bleomycin), 6h, leaf (126) genotoxic stress (bleomycin), 12h, leaf (126) genotoxic stress (bleomycin), 24h, leaf (126) genotoxic stress (bleomycin), 30min, root (126) genotoxic stress (bleomycin), 1h, root (126) genotoxic stress (bleomycin), 3h, root (126) genotoxic stress (bleomycin), 6h, root (126) genotoxic stress (bleomycin), 12h, root (126) genotoxic stress (bleomycin), 24h, root (126) osmotic stress (mannitol), 30min, leaf (126) osmotic stress (mannitol), 1h, leaf (126) osmotic stress (mannitol), 3h, leaf (126) osmotic stress (mannitol), 6h, leaf (126) osmotic stress (mannitol), 12h, leaf (126) osmotic stress (mannitol), 24h, leaf (126) osmotic stress (mannitol), 30min, root (126) osmotic stress (mannitol), 1h, root (126) osmotic stress (mannitol), 3h, root (126) osmotic stress (mannitol), 6h, root (126) osmotic stress (mannitol), 12h, root (126) osmotic stress (mannitol), 24h, root (126) salt (NaCl), 30min, leaf (126) salt (NaCl), 1h, leaf (126) salt (NaCl), 3h, leaf (126) salt (NaCl), 6h, leaf (126) salt (NaCl), 12h, leaf (126) salt (NaCl), 24h, leaf (126) salt (NaCl), 30min, root (126) salt (NaCl), 1h, root (126) sal (NaCl), 3h, root (126) salt (NaCl), 6h, root (126) salt (NaCl), 12h, root (126) salt (NaCl), 24h, root (126) drought (excised leaves, laminar air flow), 2 h, leaf (58) drought (15 min dry air, then closed vessels ), 15min, leaf (126) drought (15 min dry air, then closed vessels ), 30min, leaf (126) drought (15 min dry air, then closed vessels ), 1h, leaf (126) drought (15 min dry air, then closed vessels ), 3h, leaf (126) drought (15 min dry air, then closed vessels ), 6h, leaf (126) drought (15 min dry air, then closed vessels ), 12h, leaf (126) drought (15 min dry air, then closed vessels ), 24h, leaf (126) drought (15 min dry air, then closed vessels ), 15min, root (126) drought (15 min dry air, then closed vessels ), 30min, root (126) drought (15 min dry air, then closed vessels ), 1h, root (126) drought (15 min dry air, then closed vessels ), 3h, root (126) drought (15 min dry air, then closed vessels ), 6h, root (126) drought (15 min dry air, then closed vessels ), 12h, root (126) drought (15 min dry air, then closed vessels ), 24h, root (126) freezing, recovery, 3h, leaf (58) freezing, recovery, 24h, leaf (58) cold (4°C), seedling (76) cold (4°C), 24h, (58) cold (4°C), 30min, leaf (126) cold (4°C), 1h, leaf (126) cold (4°C), 3h, leaf (126) cold (4°C), 6h, leaf (126) cold (4°C), 12h, leaf (126) cold (4°C), 24h, leaf (126) cold (4°C), 30min, root (126) cold (4°C), 1h, root (126) cold (4°C), 3h, root (126) cold (4°C), 6h, root (126) cold (4°C), 12h, root (126) cold (4°C), 24h, root (126) heat (30°C), 1h, seedling (59) heat (40°C), 1h, seedling (59) heat (55°C), 10min, 1h recovery, suspension cell (26) heat (38°C), 15min, leaf (126) heat (38°C), 30min, leaf (126) heat (38°C), 1h, leaf (126) heat (38°C), 3h, leaf (126) heat (38°C), 3h, 1h recovery, leaf (126) heat (38°C), 3h, 3h recovery, leaf (126) heat (38°C), 3h, 9h recovery, leaf (126) heat (38°C), 3h, 21h recovery, leaf (126) heat (38°C), 15min, root (126) heat (38°C), 30min, root (126) heat (38°C), 1h, root (126) heat (38°C), 3h, root (126) heat (38°C), 3h, 1h recovery, root (126) heat (38°C), 3h, 3h recovery, root (126) heat (38°C), 3h, 9h recovery, root (126) heat (38°C), 3h, 21h recovery, root (126) heat (38°C), 15min, suspension cell (126) heat (38°C), 30min, suspension cell (126) heat (38°C), 1h, suspension cell (126) heat (38°C), 3h, suspension cell (126) heat (38°C), 3h, 1h recovery, suspension cell (126) heat (38°C), 3h, 3h recovery, suspension cell (126) heat (38°C), 3h, 9h recovery, suspension cell (126) heat (38°C), 3h, 21h recovery, suspension cell (126) UV-B, 15min, leaf (126) UV-B, 30min, leaf (126) UV-B, 1h, leaf (126) UV-B, 3h, leaf (126) UV-B, 6h, leaf (126) UV-B, 12h, leaf (126) UV-B, 24h, leaf (126) UV-B, 15min, root (126) UV-B, 30min, root (126) UV-B, 1h, root (126) UV-B, 3h, root (126) UV-B, 6h, root (126) UV-B, 12h, root (126) UV-B, 24h, root (126) high light, leaf (95) low light, leaf (95) low light, 3h, petiole (13) Cs, 7d, leaf (97) bleomycin, 3d, whole plant (57) Norfluazone, whole seedling (98) Zn, whole rosette, A. halleri (101) Zn, whole roots, A_halleri (101) Zn, whole rosette, A. petrea (101) Zn, whole roots, A. petrea (101) zearalenone (c2t), 14d, seedlings (103) zearalenone (c4t), 14d, seedlings (103) Cs, 7d, root (97) t-zeatin, seedling (115) fumomisin, protoplast (62) syringolin, 10h, leaf (86) isoxaben, suspension cell (10) Locus Probeset Name Description Annotation score GO.keywords FunCat keywords AraCyc annotations KEGG annotations BioPath annotations AcylLipid category Literature annotations Gene family 90% quantile of DE max. DE
At1g78490 1.000 CYP708A3 cytochrome P450 family protein -1.1 -0.21 -0.05 0.47 -0.11 -0.24 -0.28 -0.47 -0.73 -0.76 0.31 0.23 0.67 0.22 0.24 0.56 -0.09 -0.52 -0.13 0.08 -0.59 -1.01 0.31 -0.62 -1 -1 -0.49 0.3 -0.18 -0.94 -0.52 -0.59 -0.3 -0.19 -0.3 -0.38 -0.25 -0.17 -0.02 -0.18 -0.27 -0.77 -0.67 0 -0.28 0.12 0.63 -0.42 -1.2 -0.24 -0.34 -0.12 -0.32 -0.32 -0.54 -0.08 -0.82 -0.01 -0.76 -0.25 -0.64 -0.03 -0.77 -0.08 0.12 0.89 0.84 -0.11 0.06 0.52 0.34 1.48 0.92 1.39 1.1 -0.34 1.09 -0.09 -0.1 0.07 0.06 0.12 0.17 0.27 0.33 -0.26 0.21 -0.31 0.05 0.28 0.09 0.1 -0.09 -0.02 0.28 0.25 1 0.59 0.95 1.36 1.08 1.23 -0.33 0.03 -0.67 -0.65 -0.37 -0.26 0.67 -0.43 0.3 0.2 -0.16 0.1 0.03 0.06 -0.07 -0.01 0.36 0.52 0.82 -0.19 0.67 0.61 0.73 0.51 -0.14 -0.49 0.39 0.43 1.45 0.65 0.48 0.59 -0.41 0.51 -0.39 0.56 0.18 -0.42 -0.49 -0.36 0.21 -0.28 -0.84 0.01 -0.34 -0.92 -0.94 -0.26 -0.56 1.29 0.6 1.52 1.55 -0.23 0.34 -0.2 -0.31 -0.05 -0.15 0.02 0 -0.52 -0.26 -0.87 0.36 0.37 0.3 0.3 -0.01 0.42 -0.18 0.64 0.2 -0.07 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 0.09 1.17 -0.48 1.13 0.48 0.5 0.48 -0.63 -0.23 0.05 -1.03 -1.59 -0.44 -0.28 0.25 0.28 -0.4 0.19 0.5 -0.75 -0.05 -0.05 -0.05 -0.05 0.26 -0.45 -0.2 -0.19 -0.05 -2.06 0.22 At1g78490 263120_at CYP708A3 cytochrome P450 family protein 1






cytochrome P450 family 1.97 3.61
At2g34490 0.547 CYP710A2 cytochrome P450 family protein, similar to Cytochrome P450 61 (C-22 sterol desaturase) (Saccharomyces cerevisiae) -0.57 0.42 0.41 -0.06 0.19 0.09 0 -0.13 -0.94 -0.33 0.3 -0.48 -0.21 0.33 -0.47 -0.13 -0.37 -0.55 0.81 0.15 -0.92 -0.11 0.71 -0.66 0.16 0 -0.51 0.89 -0.45 0.1 -0.22 -0.16 0.23 0.19 -0.5 -0.41 -0.41 -0.22 -0.24 -0.14 -0.93 -0.91 -0.96 0.49 0.3 0.12 0.77 -0.28 -0.48 -0.37 -0.3 -0.24 0.22 -0.41 0.22 -0.33 -0.52 -0.76 -0.61 -0.31 0.1 -0.33 -0.13 0.01 -0.05 0.16 0.75 0.19 -0.05 0.27 0.52 0.74 0.24 0.82 0.96 0.04 0.79 -0.27 0.28 -0.17 -0.03 0.05 -0.39 0.56 0.23 -0.22 -0.03 -0.33 0.19 0.31 -0.5 -0.22 0.01 0.07 0.23 0.79 0.56 0.21 0.67 1 0.48 0.74 -0.08 -0.17 -0.06 0.15 -0.45 -0.57 -0.07 -0.83 -0.47 -0.07 -0.36 -0.19 0.19 0.22 0.2 0.43 -0.19 -0.32 0.01 -0.25 -0.28 0.4 0.23 0.06 0.23 0.51 0.45 0.24 1.61 0.8 0.37 0.95 -0.86 0.24 -0.88 0.99 1.14 1.14 0.49 -0.14 -0.95 0.97 -0.62 0.28 0.34 0.34 0.55 -0.71 -1.34 0.83 0.34 1.41 1.27 -1.23 -1.29 -0.76 -0.28 0.19 0.37 0.14 -0.08 -1.64 -1.23 -0.57 -0.02 0.51 0.44 -0.36 -1.67 -0.88 -0.95 0.14 -0.7 -0.07 0.19 0.19 0.19 0.19 0.19 0.19 0.19 0.19 -0.52 1.18 -0.43 1.31 -0.12 0.06 0.13 -0.04 -0.1 -0.56 -0.3 -0.57 -0.9 -0.34 0.19 2.25 -0.19 0.39 0.12 -0.27 0.19 0.19 0.19 0.19 0.22 0.37 0.22 -0.36 0.19 -1.63 0.19 At2g34490 266996_at CYP710A2 cytochrome P450 family protein, similar to Cytochrome P450 61 (C-22 sterol desaturase) (Saccharomyces cerevisiae) 1






cytochrome P450 family 1.89 3.93
At1g52400 0.540 BGL1 encodes a member of glycosyl hydrolase family 1 -2.25 0.54 0.02 0.72 0.11 -0.11 -0.68 -0.81 -0.47 -1.15 0.47 -0.14 0.13 0.36 0.15 -0.45 0.31 -0.32 -0.44 0.43 -0.03 -1.8 -0.01 0.08 -0.19 -0.49 -0.19 0.01 0.3 -0.1 -0.17 -0.08 0.11 -0.73 -1.31 -0.35 -0.48 -0.64 0.32 -0.44 -1.56 -1.09 -1.26 1.03 0.26 0.14 0.35 0.47 -0.15 -0.06 -0.89 -0.18 -0.19 0.03 -0.49 0 -0.53 0.13 -0.4 -0.03 -0.52 0.07 -0.4 -0.11 -0.04 1.05 0.9 1.19 0.54 1.17 0.07 1.39 2.67 3.03 2.29 -0.47 1.64 0.87 0.04 0.28 -0.82 0.23 -0.31 -0.04 0.12 0.24 -0.21 -0.62 -0.34 0.28 0.23 0.28 -0.66 -0.09 -0.28 -0.02 0.94 1.18 0.69 1.56 1.28 0.83 -1.23 0.55 -0.35 0.4 -0.48 -1.51 0.08 -0.28 0.14 0.9 0.07 2.71 -0.08 -0.13 -0.72 0.21 0.01 0.03 0.03 0.14 -0.23 0.49 0.63 1.93 -0.8 -0.34 -0.13 0.22 1.01 1.31 0.88 1.24 -0.54 -0.08 0.24 1.01 1.28 1.01 0 0.05 -1.29 -0.08 -0.61 -0.33 0.2 -0.97 -0.69 -0.37 -0.2 0.79 0.86 1.76 1.68 0.15 0.61 1.72 -0.55 -0.94 -0.42 -0.64 -0.42 -1.79 -1.09 -1.91 -0.97 -0.63 0.21 0.03 0 0.24 -0.51 0.02 -0.06 -0.23 -0.09 -0.09 -0.09 -0.09 -0.09 -0.09 -0.09 -0.09 0.2 0.79 0.13 1.8 0.32 1.2 0.69 0.84 -0.6 1.04 -0.38 0.23 -0.55 -0.56 -0.1 -0.22 -1.41 0.26 -2.72 -2.16 -7.09 2.36 -0.99 1.74 0.05 0.01 0.08 -0.08 -0.56 -3.37 0.59 At1g52400 259640_at BGL1 encodes a member of glycosyl hydrolase family 1 1


Aminosugars metabolism | Nucleotide sugars metabolism | Glycan Biosynthesis and Metabolism


Glycoside Hydrolase, Family 1 2.99 10.12
At1g10360 0.519 ATGSTU18 Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). -1.6 0.18 -0.52 0.27 -0.17 -0.08 -0.05 -0.13 -1.03 -0.57 -0.63 -0.22 -0.57 -0.33 -0.44 -0.98 -0.43 -0.59 -0.96 -0.24 -0.72 -1.12 -0.1 -0.37 -0.65 -0.39 0.17 -0.05 -0.2 -0.65 -0.62 -0.15 -0.17 -0.18 -0.83 0.22 0.21 0.46 0.02 -0.07 0.19 0.2 -0.28 -0.48 -1.6 0.11 0.22 -1.17 -1.01 -0.98 -0.16 -0.04 0.01 -0.04 -0.4 -0.03 -0.71 0.07 -0.84 -0.12 -0.64 0.11 -0.37 -0.03 -0.06 0.04 -0.42 -0.28 -0.22 -0.07 0.27 0.02 0.18 0.35 0.4 0.17 0.28 -0.41 0.1 0.16 0.46 0.39 0.31 0.01 -0.1 0.19 0.33 -0.28 0.09 0.69 0.2 0.3 0.33 0.79 0.44 0.42 0.02 0.17 1.12 1.28 1.03 1.43 -0.4 0.12 0.04 -0.05 -1.47 -1.36 0.11 0.63 1.23 1.18 0.98 1.39 0.16 0.37 0.56 0.33 -0.31 -0.57 0.21 0.27 0.43 0.45 0.6 0.8 0.3 0.1 0.13 0.43 0.18 0.21 -0.07 0.21 -0.05 0.32 0.38 0.75 1.05 0.6 0.49 0.55 0.92 -0.35 -1.83 0.55 0.56 -0.33 -0.46 -1.78 -1.86 0.34 0.39 0.85 0.53 -0.17 -0.34 -0.28 -0.16 0.13 0.43 0.55 0.5 0.54 0.81 0.09 0.37 0.21 0.7 0.11 0.2 0.63 0.57 0.45 0.74 0.36 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.14 1.27 1.03 1.42 0.15 -0.05 0.07 0.27 0.17 0.74 -1.09 -1.72 -0.96 -0.28 -0.78 0.59 -0.31 -0.6 0.33 -1.7 -1.95 -0.26 -0.03 2.04 0.06 0.41 0.13 -1.08 0.13 -2.43 0.13 At1g10360 264435_at ATGSTU18 Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). 2 toxin catabolism





Glutathione S-transferase, Tau family 2.26 4.48
At3g62750 0.511
glycosyl hydrolase family 1 protein; similar to hydroxyisourate hydrolase (Glycine max) -2.25 NA 0.21 0.36 -0.02 -0.47 -0.2 -0.21 -1.2 -1.08 -0.34 -0.15 -1.97 -0.31 -0.72 -1.35 -0.16 -0.32 -1.28 -0.28 -0.66 -1.49 0.09 -0.15 -0.55 -0.32 0.25 0.17 0.27 -0.57 -0.4 -0.24 -0.51 -0.02 -0.39 0.47 0.08 0.68 0.09 0.36 0.05 -0.32 -0.76 -0.16 -0.69 0.56 0 -0.97 -0.44 -0.36 -0.05 0.56 0.1 0.31 -0.3 0.35 -1.07 0.27 -1.01 0.23 -0.57 0.56 -0.01 0 -0.03 -0.37 0.22 -0.35 -0.25 -0.36 0.43 0.96 0.2 0.46 0.21 0.5 0.46 -1.13 0.15 0.27 0.63 0.28 0.21 -0.28 0.9 -0.01 0.21 0.32 0.28 0.21 0.49 0.56 0.52 0.22 0.48 -0.08 1.11 0.43 0.48 0.78 0.34 0.43 -0.01 0.06 -0.35 -0.35 -0.04 -1.06 0.74 0.2 0.18 0.32 0.62 0.14 0.28 0.44 0.42 -0.11 0.05 -0.6 0.74 0.28 0.57 0.43 1.32 1.38 0.33 0.03 -0.06 -0.19 0.04 -0.08 0.4 0 0.21 0.74 0.3 -0.17 0.08 0.31 0.16 -0.69 0.96 -0.44 -1.11 0.37 0.11 -1.15 -1.86 -1.19 -2.17 1.19 0.57 0.54 0.57 0.1 0.95 -0.19 1.11 0.21 0.31 0.65 0.52 -1.05 -0.52 -0.35 0.01 -0.16 0.43 0.74 0.2 0.21 0.38 0.1 0.64 0.52 0.21 0.21 0.21 0.21 0.21 0.21 0.21 0.21 0.35 0.7 0.1 0.25 0.09 0.08 0.21 -0.13 0.17 0.05 -0.92 -1.42 -0.32 -0.59 -0.06 0.82 0.01 -0.17 0.87 -0.44 -3.42 1.48 0.41 1.73 0.5 0 0.21 -0.24 0.21 -2.31 0.21 At3g62750 251230_at
glycosyl hydrolase family 1 protein; similar to hydroxyisourate hydrolase (Glycine max) 1
C-compound, carbohydrate catabolism




Glycoside Hydrolase, Family 1 2.07 5.14










































































































































































































































page created by Juergen Ehlting 06/02/06