Co-Expression Analysis of: CYP708A4 (At3g44970) Institut de Biologie Moléculaire des Plantes

































































































































































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Organ and Tissue Data Set view / save heatmap as: OpenOffice table annotation details for co-expressed genes can be found to the right of the heatmap
















































































































































































MS Excel table
















































































































































































save / view all data as: Tab delimited Table For further information on the experiments please go to the Genevestigator database using the experiment-ID given in brackets.













































































































































































shown are a maximum of 50 genes with r>0.5 (If more co-expressed genes with r>0.5 exist, they can be saved as Tab delimited data only) magnitude of change [log2(sample / average)]  0   0.3   0.6   0.9  1.2   1.5   1.8   2.1   2.4   2.7   >2.99 










































































































































































greater than zero                                                         










































































































































































less than zero                                                         










































































































































































Locus r-value Name Description suspension cell, aphidicolin, 0h ( 5) suspension cell, aphidicolin, 2h (5) suspension cell, aphidicolin, 4h (5) suspension cell, aphidicolin, 6h (5) suspension cell, aphidicolin, 8h (5) suspension cell, aphidicolin, 10h (5) suspension cell, aphidicolin, 12h (5) suspension cell, aphidicolin, 14h (5) suspension cell, aphidicolin, 16h (5) suspension cell, aphidicolin, 19h (5) suspension cell, sucrose, 0h (6) suspension cell, sucrose, 2h (6) suspension cell, sucrose, 4h (6) suspension cell, sucrose, 6h (6) suspension cell, sucrose, 8h (6) suspension cell, sucrose, 10h (6) suspension cell, sucrose, 12h (6) suspension cell, 1d (19) suspension cell, 1d (19) suspension cell, 5d (19) suspension cell, 7d (19) suspension cell, senescing (20) protoplast (62) suspension cell, light (153) suspension cell, dark (153) callus, transdifferentiation A1 (78) callus, transdifferentiation A2 (78) callus, transdifferentiation A3 (78) callus, transdifferentiation A4 (78) callus, transdifferentiation A5 (78) callus, transdifferentiation A6 (78) seedling (59) seedling (137) seedling (138) seedling (143) seedling (144) seedling, cont. light, 26h (149) seedling, cont. light, 26h (149) seedling, cont. light, 34h (149) seedling, cont. light, 38h (149) seedling, cont. light, 42h (149) seedling, cont. light, 46h (149) seedling, cont. light, 50h (149) seedling, cont. light, 54h (149) seedling, cont. light, 58h (149) seedling, cont. light, 62h (149) seedling, cont. light, 66h (149) seedling, cont. light, 70h (149) seedling, cont. light, 74h (149) seedling, far red then white light (83) seedling, dark then white light (83) Cotyledon (87) Hypocotyl (87) Hypocotyl (139) leaf, dedifferentiation A01 (50) leaf, dedifferentiation A02 (50) leaf, dedifferentiation A81 (50) leaf, dedifferentiation A82 (50) leaf, dedifferentiation A301 (50) leaf, dedifferentiation A302 (50) leaf, dedifferentiation A481 (50) leaf, dedifferentiation A482 (50) leaf, dedifferentiation B01 (50) leaf, dedifferentiation B02 (50) leaf, whole rosette, 0h (56) leaf, whole rosette, 0h (56) leaf, whole rosette, 2h (56) leaf, whole rosette, 4h (56) leaf, whole rosette, 8h (56) leaf, whole rosette, 12h (56) leaf, whole rosette, 13h (56) leaf, whole rosette, 14h (56) leaf, whole rosette, 16h (56) leaf, whole rosette, 20h (56) leaf, whole rosette, 24h (56) leaf, whole rosette, 0h (56) leaf, whole rosette, 4h (56) leaf, whole rosette, 8h (56) leaf, whole rosette, 12h (56) leaf, whole rosette, 16h (56) leaf, whole rosette, 20h (56) leaf, mature, high light (68) leaf, mature, low light (68) leaf stage 7, petiol (88) leaf stage 7, proximal half (88) leaf stage 7, distal half (88) guard cell enriched (11) senescing leaf, Col5 (60) senescing leaf, Col0 (60) senescing leaf (88) cauline leaf (88) roots (87) whole roots, A. halleri (101) whole roots, A. petrea (101) roots (141) mature roots (23) lateral roots (24) lateral roots (29) roots, axillary buds, dormant (30) roots, axillary buds, active (30) Roots, N03 depleted, dex treated (64) Roots, N03 depleted (64) root elongation zone (79) stem (80) stem (88) stem, base (66) stem, tip (66) stem, 1st node (88) stem, base, injured with needle (8) shoot apex (87) shoot apex (87) shoot apex (88) apical region, vegetative, Col (94) apical region, reproductive, 3d, Col (94) apical region, reproductive, 5d, Col (94) apical region, reproductive, 7d, Col (94) apical region, vegetative, Ler (94) apical region, reproductive, 3d, Ler (94) apical region, reproductive, 5d, Ler (94) apical region, reproductive, 7d, Ler (94) flower, stage 9 (89) flower, stage 10 (89) flower, stage 12 (89) flower, stage 15 (89) flower-silique, stage I (84) flower-silique, stage II (84) flower-silique, stage III (84) flower bud, young (9) flower bud, old (9) flower (80) flower (92) flower (100) sepal, stage 12 (89) sepal, stage 15 (89) petal, stage 12 (89) petal, stage 15 (89) stamen, stage 12 (89) stamen, stage 15 (89) carpel, stage 12 (89) carpel, stage 15 (89) pedicel, stage 15 (89) pollen, uninucleate microspores (22) pollen, bicellular (22) pollen, tricellular (22) pollen, mature (22) pollen (74) silique, young (136) silique, old (136) silique, stage 3 (90) silique, stage 4 (90) silique, stage 5 (90) seed, stage 6 (90) seed, stage 7 (90) seed, stage 8 (90) seed, stage 9 (90) seed, stage 10 (90) seed, dry (116) seed, dry (117) seed, fresh (96) seed, dormant (96) seed, imbibed, 1h (117) seed, imbibed, 3h (117) seed, imbibed, 22°C (118) seed, imbibed, far red, 22°C (132) seed, imbibed, 4°C (118) seed, imbibed, far red, 4°C (132) seed, imbibed (116) Locus Probeset Name Description Annotation score GO.keywords FunCat keywords AraCyc annotations KEGG annotations BioPath annotations AcylLipid category Literature annotations Gene family 90% quantile of DE max. DE
At3g44970 1.000 CYP708A4 cytochrome P450 family protein -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 3.35 2 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 1.88 1.64 2.87 1.23 0.27 3.4 2.62 1.63 2.82 3.26 3.31 3.25 2.52 1.78 2.41 2.9 3.38 3.4 3.14 3.82 1.45 5.29 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.09 -0.56 -0.56 -0.56 0.93 0.28 -0.56 1.33 1.35 0.56 0.19 0.08 0.08 1.62 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 2.02 2.09 -0.56 -0.84 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.17 -0.14 -0.56 -0.48 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 -0.56 At3g44970 252629_at CYP708A4 cytochrome P450 family protein 1
detoxification | detoxification involving cytochrome P450




cytochrome P450 family 3.79 6.14
At1g14700 0.656
Similar to purple acid phosphatase from Arabidopsis thaliana -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -0.74 -0.16 2.56 1.44 -1.65 -1.65 -1.46 -1.65 -1.26 -1.65 2.06 1.39 3.06 3 1.54 2.95 2.37 2.68 2.49 2.71 2.83 2.83 2.19 2.46 2.52 2.52 2.52 2.54 0.14 2.54 2.24 2.87 2.7 2.19 0.33 -0.1 -0.24 -0.57 -0.41 -1.27 -0.75 -1.71 -1.65 0.88 0.82 0.65 0.56 0.87 0.97 0.59 0.62 1.07 0.72 0.62 2.18 2.48 1.91 1.71 1.86 2.04 1.64 1.93 2.43 1.74 1.4 1.01 0.99 0.15 -0.8 -0.31 -0.94 2.25 3.59 -0.61 -1.56 0.43 -1.65 0.59 1.42 -1.08 -1.03 -1.65 0.21 0.42 1.14 1.47 0.51 -1.1 1.55 1.57 -0.35 -0.09 -0.6 -0.79 -1.78 0.88 0.36 -0.36 -0.68 0.73 0.5 -1.1 -0.76 0.44 -0.83 -1.65 1.49 0.65 -0.33 0.7 0.18 -1.65 -1.65 -1.97 -1.08 -1.18 0.96 -1.76 -2.04 0.83 -1.08 -1.45 -1.65 -0.15 0.88 -1.65 -1.65 -1.73 -1.92 -2 -1.83 -1.65 -1.57 -1.65 -1.17 -1.65 -1.77 -1.01 -1.65 -1.65 -1.86 0.7 0.7 -1.65 -1.65 -1.65 At1g14700 262830_at
Similar to purple acid phosphatase from Arabidopsis thaliana 4


Riboflavin metabolism | gamma-Hexachlorocyclohexane degradation



4.45 5.63
At4g12330 0.650 CYP706A7 cytochrome P450 family protein -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 1.83 0.83 -0.43 -0.43 -0.43 0.59 -0.43 -0.43 1.71 1.38 1.71 -0.43 0.88 2.91 2.75 2.72 2.27 2.19 2.18 1.93 2.31 2.18 2.44 2.45 -0.43 1.45 2.44 2.5 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 0.68 -0.43 0.89 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.33 -0.42 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 2.02 -0.43 -0.43 -0.43 2.29 3.34 2.29 -0.43 -0.43 -0.43 -0.43 2.38 0.19 -0.43 -0.43 -0.43 -0.46 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.49 -0.43 -0.43 0.11 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.28 -0.43 -0.43 -0.31 -0.37 -0.28 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 0.01 -0.43 -0.43 -0.43 -0.43 -0.43 -0.43 0.34 0.34 -0.43 -0.43 -0.43 At4g12330 254836_at CYP706A7 cytochrome P450 family protein 1
biosynthesis of secondary products derived from primary amino acids | biosynthesis of glycosinolates and derivatives




cytochrome P450 family 2.79 3.83
At5g37990 0.621
S-adenosyl-L-methionine:carboxyl methyltransferase family protein, similar to defense-related protein cjs1 (Brassica carinata), caffeine synthase (Camellia sinensis), and SAM:jasmonic acid carboxyl methyltransferase -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 1.11 -0.95 -0.95 1.6 -0.95 1.09 -0.95 -0.95 0.63 -0.95 -0.95 -0.95 -0.95 -0.12 -0.95 -0.95 -0.28 -0.95 -0.95 -0.95 2.25 6.43 3.11 0.81 1.84 6.02 5.15 5.21 5.4 5.46 5.28 5.14 5.75 5.67 5.37 5.56 5.59 5.49 -0.95 -0.95 -0.95 3.92 1.87 -0.95 -0.95 1.17 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 0.56 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 5.48 -0.95 -0.95 4.17 5.73 6.8 -0.95 -0.95 -0.95 4.07 3.18 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 -0.95 At5g37990 249599_at
S-adenosyl-L-methionine:carboxyl methyltransferase family protein, similar to defense-related protein cjs1 (Brassica carinata), caffeine synthase (Camellia sinensis), and SAM:jasmonic acid carboxyl methyltransferase 2






Methyltransferase, SABATH family 6.44 7.75
At5g05890 0.620
UDP-glucoronosyl/UDP-glucosyl transferase family protein -0.37 -0.37 -0.37 -0.37 -0.37 -0.37 -0.37 -0.37 -0.37 -0.37 -0.37 -0.37 -0.37 -0.37 -0.37 -0.37 -0.37 -0.37 -0.37 -0.37 -0.37 -0.37 -0.37 1.73 1.44 -0.2 -0.37 -0.37 -0.37 -0.37 -0.37 0.22 0.06 1.2 0.23 0.28 1.01 1.31 1.73 1.48 1.2 0.88 1.4 1.56 1.76 1.73 1.36 0.75 1.45 0.84 1.42 -0.05 1.33 -0.37 0.4 1.28 -0.37 -0.37 -0.37 -0.37 -0.37 -0.37 -0.37 -0.01 -0.13 0.04 -0.37 -0.37 0.07 -0.37 -0.37 -0.37 -0.37 0.49 0.69 -0.09 0.56 0.65 0.28 0.11 -0.37 0.28 -0.37 -0.04 -0.74 -0.37 -0.37 0.73 -0.37 -0.41 -0.1 2.75 -0.37 -0.37 1.58 1.68 1.68 0.85 0.56 -0.37 1.08 1.24 0.77 -0.37 -0.28 -0.37 -0.37 -0.4 -0.37 0.11 0.34 -0.21 -0.59 -0.68 -0.67 -1.48 -1.86 -0.37 -0.37 -0.37 -0.37 -0.64 -0.37 -0.37 -0.44 -0.37 -0.37 -0.37 -0.37 -0.42 -0.37 -0.37 -0.37 -0.37 -0.53 -0.37 -0.37 -0.37 -0.37 -0.37 -0.38 -0.37 -0.37 -0.37 -0.37 -0.37 -0.37 -0.37 -0.37 -0.37 -0.64 -0.37 -0.52 -0.37 -0.37 -0.37 -0.4 -0.37 -0.37 -0.14 -0.37 -0.83 -0.37 -0.37 -0.38 -0.4 2.75 At5g05890 250751_at
UDP-glucoronosyl/UDP-glucosyl transferase family protein 1






Glycosyl transferase, Family 1 2.15 4.62
At4g00400 0.610
phospholipid/glycerol acyltransferase family protein -1.29 -1.29 -1.29 -1.29 -1.29 -1.29 -1.29 -1.29 -1.29 -1.29 -1.29 -1.29 -1.29 -1.29 -1.29 -1.29 -1.29 -1.29 -1.29 -1.29 -1.29 -1.01 -1.34 2.06 1.65 -0.79 -0.77 -0.81 -0.97 -0.52 -1.15 1.12 0.33 1.77 1.32 1.04 2.37 2.83 2.29 2.88 2.04 1.7 2.31 2.52 2.27 2.24 1.91 1.53 2.06 0.41 2.25 0.89 0.19 -0.28 1.86 1.68 -0.34 -0.42 1.41 0.84 -1.48 -1.29 -1.12 -1.2 0.82 -0.03 0.55 0.88 0.8 0.7 0.75 0.47 0.94 1.24 0.46 0.92 1.09 0.8 0.43 0.18 0.78 0.21 0.36 0.34 0.54 0.15 -0.43 -0.23 -0.56 -1.44 0.08 -1.32 0.31 -1.29 -0.39 -0.95 0.33 -0.55 0.49 0.65 -1.29 -1.46 -0.63 1.35 -0.7 -0.56 0.96 -0.64 -1.38 1.88 1.69 1.23 0.75 1.17 1.68 0.44 0.01 0.06 0.46 0.36 0.71 0.73 0.65 -0.27 1.45 0.19 1.5 0.34 0.45 1.28 1.08 0.01 -0.16 -1.51 1.5 -1.36 -1.42 -1.62 1.29 1.02 1.11 -1.29 -1.29 -1.29 -1.02 -1.29 -1.13 -1.29 -0.01 -1.71 -1.29 -1.29 -1.29 -1.33 -1.29 -1.29 -1.29 -1.29 -1.12 -1.22 -1.29 -1.29 1.03 1.03 -1.29 -1.29 -1.36 At4g00400 255662_at
phospholipid/glycerol acyltransferase family protein 2




Synthesis of membrane lipids in endomembrane system

3.55 4.58
At1g56430 0.609
similar to nicotianamine synthase (Lycopersicon esculentum), nicotianamine synthase 2 (Hordeum vulgare) -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 2.02 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 2.94 -1.17 0.72 1.25 2.35 2.76 2.23 2.08 3.01 3.01 3.19 2.72 2.48 2.43 2.69 2.85 3.36 3.15 -1.17 -1.17 1.74 3.83 -0.72 -1.17 -1.17 0.08 -0.05 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 0.78 0.26 0.3 1.37 1.28 0.37 1.35 1.34 1.17 0.28 1.17 1.66 1.91 1.19 1.57 2.06 2.02 2.7 3.15 2.31 1.95 1.25 1.91 0.63 -1.17 -0.05 0.73 0.31 0.28 0.7 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 0.16 -0.22 0.5 -1.17 -0.01 2.11 -1.17 1.88 -0.03 2.21 3.44 0.31 2.52 2 1.8 0.38 3.21 2.58 1.45 -0.81 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 -0.12 0.38 -1.17 -1.02 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 -1.17 -0.78 -0.78 -1.17 -1.17 -1.19 At1g56430 259632_at
similar to nicotianamine synthase (Lycopersicon esculentum), nicotianamine synthase 2 (Hordeum vulgare) 4



Leaf Glycerolipid Biosynthesis | Leaf Glycerolipid Biosynthesis in Plastid


4.15 5.02
At4g37410 0.609 CYP81F4 cytochrome P450 family protein -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 3.15 1.9 0.15 -1.98 -1.98 -1.98 -1.98 -1.98 4.4 5.17 4.57 2.97 4.57 5.34 4.78 4.59 5.16 5.41 5.17 4.9 5.07 5.01 5.09 5.03 5 4.83 2.74 2.34 -1.98 6.14 2.11 -1.98 -1.98 1.11 -1.98 -1.98 -1.98 -1.98 -1.98 -0.38 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 3.23 0.71 1.72 1.27 2.37 1.2 -1.98 -1.98 -0.08 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 6.04 -1.98 -1.98 4.83 4.54 6.32 4.32 -1.98 -1.98 6.29 6.32 4.78 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 2.16 3.31 2.52 4.33 4.25 4.38 3.71 4.08 4.15 3.31 2.65 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 0.56 0.53 -1.98 0.39 1.69 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 -1.98 2.54 -1.98 -1.98 0.66 0.66 -0.82 -1.98 2.88 At4g37410 253073_at CYP81F4 cytochrome P450 family protein 1






cytochrome P450 family 7.15 8.30


























































































































































































page created by Juergen Ehlting 06/02/06