Co-Expression Analysis of: CYP709B3 (At4g27710) Institut de Biologie Moléculaire des Plantes



































































































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Hormones etc. Data Set save / view heatmap as: OpenOffice Table annotation details for co-expressed genes can be found to the right of the heatmap


















































































































MS Excel Table


















































































































save / view all data as: Tab delimited Table For further information on the experiments please go to the Genevestigator database using the experiment-ID given in brackets.















































































































shown are a maximum of 50 genes with r>0.5 (If more co-expressed genes with r>0.5 exist, they can be saved as Tab delimited data only) magnitude of change [log2(treatment/control)]    0   0.3   0.6   0.9  1.2   1.5   1.8   2.1   2.4   2.7   >2.99 












































































































greater than zero                                                         












































































































less than zero                                                         












































































































Locus r-value Name Description ethylene, 3h, petiole (13) mock, 30min, seedling (110) IAA, 30min, seedling (110) IAA, 1h, seedling (110) IAA, 3h, seedling (110) zeatin, 30min, seedling (110) zeatin, 1h, seedling (110) zeatin, 3h, seedling (110) GA3, 30min, seedling (110) GA3, 1h, seedling (110) GA3, 3h, seedling (110) ABA, 30min, seedling (110) ABA, 1h, seedling (110) ABA, 3h, seedling (110) MJ, 30min, seedling (110) MJ, 1h, seedling (110) MJ, 3h, seedling (110) ACC, 30min, seedling (110) ACC, 1h, seedling (110) ACC, 3h, seedling (110) BL, 30min, seedling (110) BL, 1h, seedling (110) BL, 3h, seedling (110) ABA, 3 uM, imbided seed (116) ABA, 30 uM, imbided seed (116) GA, 3h, imbibed seed (119) GA, 6h, imbibed seed (119) GA, 9h, imbibed seed (119) GA, 3h, imbibed seed (134) GA, 6h, imbibed seed (134) GA, 9h, imbibed seed (134) GA, 30min, whole plant (99) GA, 60min, whole plant (99) GA, 3h, whole plant (99) IAA, 0.1uM, 1h, seedling (144) IAA, 0.1uM, 3h, seedling (144) IAA, 1uM, 1h, seedling (144) IAA, 1uM, 3h, seedling (144) ppi, 3h, seedling (113) ppi, 12h, seedling (113) uni, 3h, seedling (113) uni, 12h, seedling (113) brz220, 3h, seedling (113) brz220, 12h, seedling (113) brz91, 3h, seedling (113) brz91, 12h, seedling (113) pac, 3h, seedling (113) pac, 12h, seedling (113) px, 3h, seedling (113) px, 12h, seedling (113) pno8, 3h, seedling (113) pno8, 12h, seedling (113) ibup, 3h, seedling (113) B9, 3h, seedling (113) AgNO3, 3h, seedling (113) AVG, 3h, seedling (113) Sal, 3h, seedling (113) MG132, 3h, seedling (113) 246T, 3h, seedling (113) PCIB, 3h, seedling (113) TIBA, 3h, seedling (113) NPA, 3h, seedling (113) CHX, 3h, seedling (113) Colm, 3h, seedling (113) ColPNO8, 3h, seedling (113) ColBrz, 3h, seedling (113) glucose, 8h, seedling (14) sucrose, 8h, seedling (15) deoxyglucose, 8h_seedling (14) methylglucose, 8h, seedling (14) K depleted, whole rosette (97) K depleted, root (97) Sulfate depleted, 2h, root (112) Sulfate depleted, 4h, root (112) Sulfate depleted, 8h, root (112) Sulfate depleted, 12h, root (112) Sulfate depleted, 24h, root (112) mannitol, 8h, seedling (14) CO2, 1000ppm, guard cell enriched (11) CO2, 1000ppm, mature leaf (11) CO2, high light, whole rosette (95) CO2, medium light, whole rosette (95) CO2, low light, whole rosette (95) CO2, 2h, juvenile leaf (151) CO2, 4h, juvenile leaf (151) CO2, 6h, juvenile leaf (151) CO2, 12h, juvenile leaf (151) CO2, 24h, juvenile leaf (151) CO2, 48h, juvenile leaf (151) dark, 45min, seedling (109) dark, 4h, seedling (109) far red, 45min, seedling (109) far red, 4h, seedling (109) red pulse1, seedling (109) red pulse2, seedling (109) red, 45min, seedling (109) red, 4h, seedling (109) blue, 45min, seedling (109) blue, 4h, seedling (109) UV-A pulse1, seedling (109) UV-A pulse2, seedling (109) UV-AB pulse1, seedling (109) UV-AB pulse2, seedling (109) UV-A, 18h, mature leaf (72) UV-B, 18h, mature leaf (72) Locus Probeset Name Description Annotation score GO.keywords FunCat keywords AraCyc annotations KEGG annotations BioPath annotations AcylLipid category Literature annotations Gene family 90% quantile of DE max. DE
At4g27710 1.000 CYP709B3 cytochrome P450 family protein -0.01 0.17 0.03 0.19 -0.03 0.15 -0.09 -0.91 0.36 0.21 0.1 0.19 0.18 0.07 -0.27 -0.85 -0.04 -0.51 -0.66 0.11 0.15 -0.83 -1.11 0.17 0.17 0.17 0.17 0.17 0.17 0.17 0.17 -0.03 -0.15 -0.98 -0.02 -0.22 0.08 0.05 0.23 0.41 0.63 0.47 0.42 0.36 0.42 0.36 0.49 0.19 0.67 0.26 0.39 0.09 0.28 0.4 -0.18 0.37 0.3 0.49 0.38 0.33 0.41 0.4 -2.04 0.46 -2.04 0.59 -0.02 -0.28 -0.03 0.02 -2.31 -1.14 0.48 0.28 0.32 0.28 0.17 -0.1 -0.11 -0.79 0.13 0.08 0.01 0.25 0.14 0.11 0.3 0.27 0.15 0.17 -0.51 0.22 0 0.23 -0.26 0.23 0.08 0.16 0.1 0.09 -0.21 -0.15 -0.47 0.4 -0.52 At4g27710 253886_at CYP709B3 cytochrome P450 family protein 1






cytochrome P450 family 1.44 2.99
At1g11860 0.684
Similar to aminomethyltransferase, mitochondrial precursor from Flaveria anomala -0.24 0.11 0.12 -0.02 -0.15 -0.04 -0.01 0.02 0.01 -0.15 -0.12 -0.01 -0.08 -0.18 -0.05 -0.23 -0.22 -0.01 -0.11 0.04 -0.07 -0.23 0.09 -0.03 0.02 0.24 0.14 0.24 0.24 0.14 0.24 0.03 -0.15 -0.34 0.05 0.02 0.17 0.01 0.13 0.07 0.05 0.12 0.05 0.06 0.32 0.07 0.14 0.01 0.24 0.2 0.36 0.17 0.25 0.27 -0.03 0.1 0.15 0.26 0.17 0.38 0.01 0.14 -0.68 -0.28 -0.43 -0.38 -0.04 -0.27 -0.28 -0.06 -1.45 -0.41 0.08 0.11 0.1 0.22 0.16 -0.28 0.5 -0.2 -0.04 -0.02 0.28 0.17 -0.07 0.09 0.22 0.09 0.11 0.03 -0.71 0.1 0.47 0.08 -0.27 0 0.19 -0.14 0.33 -0.08 -0.23 0.04 -0.33 0.31 -0.2 At1g11860 264394_at
Similar to aminomethyltransferase, mitochondrial precursor from Flaveria anomala 2

glycine degradation I Nitrogen metabolism | Glycine, serine and threonine metabolism | One carbon pool by folate



0.69 1.95
At5g35790 0.666
Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is more prevalent in developing organs but absent in the root. -0.67 0.16 0.09 -0.12 -0.5 0.05 -0.49 -0.27 0.16 -0.13 0.2 0.26 -0.12 -0.45 -0.02 -0.63 -0.33 0.09 -0.35 -0.24 0.12 -0.27 -0.06 0.28 0.17 0.02 0.02 0.12 0.02 0.02 0.12 -0.2 -0.21 -0.35 -0.35 -0.22 -0.13 -0.51 0.25 0.51 0.04 0.62 0.22 0.61 0.33 0.49 0.18 0.28 0.24 0.39 0.2 0.56 0.27 0.24 -0.73 0.37 -0.45 0.46 0.21 0.24 -0.32 0.1 -1.08 0.33 -0.55 0.4 -0.35 -0.78 0.2 0.01 -1.55 0.16 0.09 0.26 0.59 -0.22 0.54 0 -0.04 -0.07 0.45 -0.05 0.1 0.17 0.12 0.51 0.11 0.32 0.31 0.13 -0.71 0.4 0.01 0.35 -0.43 0.28 -0.02 -0.13 0.11 0.18 -0.3 0.22 -0.2 0.02 -0.48 At5g35790 249694_at
Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is more prevalent in developing organs but absent in the root. 10 glucose-6-phosphate 1-dehydrogenase activity | glucose metabolism | pentose-phosphate shunt, oxidative branch C-compound and carbohydrate metabolism | pentose-phosphate pathway oxidative branch of the pentose phosphate pathway Pentose phosphate pathway | Glutathione metabolism Intermediary Carbon Metabolism


1.18 2.17
At4g25080 0.665
similar to Magnesium-protoporphyrin O-methyltransferase (Synechocystis) -0.33 0.08 0.1 0.05 -0.24 0.14 0.05 -0.06 0.05 -0.01 0 0.08 -0.13 -0.45 -0.09 -0.24 -0.27 -0.02 -0.1 -0.09 -0.07 -0.25 -0.1 -0.1 -0.28 -0.06 0.32 0.33 -0.06 0.32 0.33 -0.08 -0.2 -0.51 0.05 -0.12 0.27 -0.42 0.06 0.14 0.21 0.28 0.11 0.2 0.21 0.14 0.21 0.32 0.4 0.25 0.08 0.35 0.18 0.38 -0.48 0.33 0.03 0.09 0.02 0.39 0.12 0.14 -1.13 0.04 -0.49 0.2 -0.36 -0.4 -0.12 0.01 -0.86 0.21 0.08 0.16 -0.07 -0.02 -0.08 -0.23 0.35 0.13 0.13 -0.23 0.18 0.19 0.12 0.07 0.13 0.08 0.09 0.24 -0.74 0.27 0.08 0.24 -0.12 0.18 0.22 -0.08 0.1 0.01 -0.11 0.14 -0.14 0.02 -0.51 At4g25080 254105_at
similar to Magnesium-protoporphyrin O-methyltransferase (Synechocystis) 9 magnesium protoporphyrin IX methyltransferase activity | chlorophyll biosynthesis secondary metabolism
Porphyrin and chlorophyll metabolism Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Chlorophyll biosynthesis and breakdown
chlorophyll and phytochromobilin metabolism | chlorophyll biosynthesis
0.82 1.54
At5g13980 0.664
glycosyl hydrolase family 38 protein, similar to alpha-mannosidase from (Homo sapiens) -0.17 0.01 0 0.01 0.05 0.12 -0.06 -0.19 0.02 -0.06 0.11 0.01 -0.04 0.03 -0.05 -0.15 -0.03 -0.16 -0.1 0.14 -0.11 -0.16 -0.33 -0.01 0.01 -0.14 0.08 0.08 -0.14 0.08 0.08 -0.2 -0.3 0.16 0.04 0.06 0.09 -0.15 0.16 0.35 0.07 0.39 0.04 0.38 0.38 0.26 0.16 0.22 0.27 0.32 0 0.22 0 0.28 -0.11 0.14 0.06 0.24 -0.02 0.17 0.09 0.12 -0.9 0.03 -0.26 0.13 -0.1 0.22 0.01 0 -1.18 -0.51 0.01 0.15 -0.03 -0.1 -0.02 -0.11 0.33 0.28 0.18 0 -0.17 -0.01 0.01 -0.09 -0.01 -0.05 0.08 0.12 0.15 0.09 -0.08 0.14 0.15 -0.15 -0.02 0.12 0.09 -0.09 -0.01 -0.15 0.01 -0.31 -0.75 At5g13980 250203_at
glycosyl hydrolase family 38 protein, similar to alpha-mannosidase from (Homo sapiens) 2


Glycan Biosynthesis and Metabolism | N-Glycan degradation



0.62 1.56
At3g16520 0.635
UDP-glucoronosyl/UDP-glucosyl transferase family protein, -0.15 0.11 0.02 0.03 -0.16 0.08 -0.1 -0.17 0.06 0.04 0.01 0.05 0.05 -0.14 -0.2 -0.37 0.05 -0.02 -0.28 -0.19 -0.04 -0.22 -0.44 0.19 0.19 0.25 0.1 0.47 0.25 0.1 0.47 -0.14 -0.34 -0.76 -0.26 -0.15 -0.06 -0.27 0.11 0.19 0.47 0.56 0.14 0.31 0.25 0.4 0.41 0.38 0.44 0.25 0.31 0.31 0.25 0.23 0.21 0.25 0.37 -0.04 0.33 0.26 0.71 0.44 -2.16 0.14 -0.24 0.24 -0.16 -0.76 -0.12 -0.01 -0.73 0.73 -0.09 0.21 0.1 -0.49 0.07 -0.16 -0.92 -0.8 0.01 0.02 0.17 0.16 0.06 0.08 0.1 0.19 0.13 0.01 -1.57 0.19 0.16 0.41 -0.37 0.14 0.16 -0.03 0.09 0.12 -0.41 0.48 -0.2 0 -0.48 At3g16520 257205_at
UDP-glucoronosyl/UDP-glucosyl transferase family protein, 1






Glycosyl transferase, Family 1 1.22 2.89
At3g19480 0.612
D-3-phosphoglycerate dehydrogenase, putative / 3-PGDH, putative -0.21 0.2 0.24 0.13 -0.28 0.05 -0.01 -0.18 0.13 0.05 -0.22 0.1 0.28 -0.64 0.25 0.14 -0.2 -0.11 -0.27 -0.05 -0.1 -0.28 0.08 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.25 0.09 -0.34 -0.1 -0.15 0.17 -0.3 0.15 0.33 0.24 0.21 -0.06 0.22 0.22 0.43 0.23 0.17 0.37 0.15 0.21 0.66 0.03 0.26 -0.27 0.17 -0.33 0.18 0.14 0.06 -0.03 0.14 -1.32 -0.16 -0.63 -0.25 -0.18 0.2 0.09 0.17 -2.83 0.2 0.2 0.2 0.2 0.2 0.2 0.11 -0.07 -2.69 -0.04 -0.04 0.19 0.1 0.01 0.28 0.06 0.17 0.09 0.2 -0.72 0.2 0.38 0.2 -0.72 0.2 0.07 0.2 0.93 0.2 -0.72 0.2 -0.72 0.69 0.82 At3g19480 258025_at (m)
D-3-phosphoglycerate dehydrogenase, putative / 3-PGDH, putative 4

phosphoglycerate dehydrogenase, cysteine biosynthesis II | phosphoglycerate dehydrogenase, serine biosynthesis Glycine, serine and threonine metabolism



1.10 3.76
At3g54050 0.609
strong similarity to fructose-1,6-bisphosphatase (Brassica napus) -0.12 0.09 0.13 -0.08 -0.09 -0.11 0.06 0 0.01 -0.09 -0.21 0 0.05 -0.07 -0.08 -0.18 -0.28 -0.1 -0.02 -0.05 0 -0.04 0.08 0.39 0.05 0.08 0.37 0.39 0.08 0.37 0.39 0.01 -0.05 -0.47 -0.03 -0.01 0.27 -0.51 0.07 -0.13 0.24 -0.1 0.22 -0.05 0.46 0.13 0.14 0.05 0.36 -0.1 0.31 0.16 0.45 0.41 0.01 0.28 -0.06 0.35 0.03 0.21 0.18 0.26 -0.72 -0.22 -0.33 -0.18 -0.2 -0.08 -0.17 -0.1 -1.44 0.09 0.09 0.09 0.09 0.09 0.09 -0.37 -0.32 -0.28 0.11 0.05 0.28 0.08 -0.05 0.2 0.15 0.12 0.08 -0.1 -1.03 0.27 0.25 0.52 -0.34 -0.06 0.12 -0.51 0.25 -0.06 -0.27 0.01 -0.07 0.15 -0.4 At3g54050 251885_at
strong similarity to fructose-1,6-bisphosphatase (Brassica napus) 10
C-compound and carbohydrate metabolism | glycolysis and gluconeogenesis | photosynthesis | biogenesis of chloroplast gluconeogenesis | Calvin cycle Glycolysis / Gluconeogenesis | Pentose phosphate pathway | Fructose and mannose metabolism | Carbon fixation Intermediary Carbon Metabolism


0.85 1.96
At4g01800 0.602
similar to preprotein translocase secA subunit (Arabidopsis thaliana) -0.04 0.04 -0.1 0.13 -0.19 -0.02 0.07 -0.03 0.05 0.2 -0.05 0.05 0.16 -0.04 0.01 0.11 -0.1 -0.17 -0.12 0.08 -0.31 -0.19 -0.19 -0.11 -0.07 -0.07 0.36 0.13 -0.07 0.36 0.13 0.11 0.28 0.1 -0.26 -0.12 0.34 -0.32 0.2 0.39 0.18 0.34 0.15 0.14 0.25 0.24 0.27 0.33 -0.09 0.03 0.17 0.16 -0.12 0.07 -0.01 0.07 0.14 -0.02 0.07 -0.21 0.16 0.06 -0.92 0.06 -0.06 0.19 -0.33 -0.33 -0.2 0.03 -1.33 0.08 -0.17 0.1 -0.11 -0.06 0 -0.25 -0.22 -0.21 0.05 -0.04 -0.07 0.07 -0.01 -0.01 0.05 0.16 -0.01 0.07 -0.08 0.33 0.08 0.22 -0.23 0.27 -0.16 0.15 -0.04 0.09 -0.1 0.08 -0.48 0.15 0.07 At4g01800 255540_at
similar to preprotein translocase secA subunit (Arabidopsis thaliana) 4
protein targeting, sorting and translocation | biogenesis of chloroplast
Folding, Sorting and Degradation | Protein export Pathway for nuclear-encoded, thylakoid-localized proteins | Sec (secretory) pathway


0.65 1.72
At2g38040 0.599 CAC3 acetyl co-enzyme A carboxylase; carboxyltransferase alpha subunit 0.11 0.08 0.14 0.16 -0.07 0.24 -0.02 0.1 0.22 0.05 -0.01 0.25 -0.06 -0.04 -0.02 -0.14 0.09 0.14 -0.16 0.04 0.16 -0.35 0.03 0.12 0.01 0.17 -0.09 -0.28 0.17 -0.09 -0.28 -0.3 -0.16 -0.27 0.01 0 0.18 0.03 0.04 0.06 0.05 0.23 0.05 0.1 0.06 0.2 0.09 0.21 0.1 0.21 0.02 0.17 -0.18 0 -0.25 -0.04 -0.09 -0.07 0.03 0.1 0 0.17 -1.02 0.31 -0.02 0.28 -0.35 -0.49 0.19 0.05 -1.66 -0.47 0.04 0.02 0.13 0.19 0 0.11 -0.07 -0.68 0.44 0.06 0.11 0.06 -0.01 0.09 -0.01 -0.02 0.07 0.05 0.46 0.06 0.07 0.05 0.42 0.14 0.31 0.14 -0.03 0 0.4 -0.02 0.15 -0.3 -0.63 At2g38040 266099_at CAC3 acetyl co-enzyme A carboxylase; carboxyltransferase alpha subunit 8
C-compound and carbohydrate metabolism | lipid, fatty acid and isoprenoid metabolism fatty acid biosynthesis -- initial steps Pyruvate metabolism | Propanoate metabolism | Fatty acid biosynthesis (path 1) | Tetracycline biosynthesis Leaf Glycerolipid Biosynthesis | Leaf Glycerolipid Biosynthesis in Plastid Synthesis of fatty acids in plastids

0.75 2.13
At1g03130 0.585
photosystem I reaction center subunit II, chloroplast, putative -0.19 0.09 0.26 0.17 -0.16 0.06 0.23 -0.19 0.05 0.19 -0.1 0.13 0.05 -0.23 0.11 -0.1 -0.33 0.09 -0.08 -0.28 -0.06 -0.04 -0.35 0.09 0.09 0.09 -0.13 0.09 0.09 -0.13 0.09 -0.01 -0.21 -0.66 -0.16 -0.26 0.68 -0.18 0.03 0.22 0.41 0.53 0.19 0.18 0.27 0.36 0.25 0.46 0.75 0.16 -0.33 0.41 0.08 0.56 -0.31 0.52 0.05 0.04 0.16 0.24 0.14 0.08 -2 0.72 0.17 0.87 -0.34 -0.93 -0.14 -0.08 -1.14 0.09 -0.14 -0.16 0.09 0.09 -0.28 -0.17 -0.02 0.24 0.26 0.04 0.23 0.21 0.09 0.17 -0.15 0.15 0.08 0.11 -1.83 0.14 -0.22 0.36 -0.28 0.12 0.14 -0.02 -0.17 0.32 -0.45 0.54 -0.34 0.1 -0.63 At1g03130 263114_at
photosystem I reaction center subunit II, chloroplast, putative 4


Photosynthesis Photosystems | Photosystem I | photosystem I reaction center


1.14 2.88
At2g40540 0.585 KT2 potassium transporter, putative -0.01 0.09 0.34 0.55 0.82 0.27 0.21 -0.13 0.01 0.16 0.02 0.16 0.47 0.07 0.1 0.15 0.07 -0.03 0.16 -0.11 -0.14 -0.33 -1 -0.21 0.05 0.26 -0.02 0.01 0.26 -0.02 0.01 0.01 -0.26 0.54 0.22 0.56 0.43 0.49 0.04 0.2 0.08 0.24 -0.03 0.2 -0.02 0.28 -0.02 0.2 0.13 0.17 -0.02 0.27 0.01 0.1 -0.57 -0.12 -0.67 -0.12 0.15 0.06 -0.22 0.16 -1.5 -0.02 -0.75 0.11 -0.5 -0.11 0.04 -0.1 -1.9 -0.35 0.07 0.15 -0.14 -0.02 0.07 -0.07 0.28 0.17 -0.08 -0.16 -0.16 0.06 0.2 0 0.13 0.09 0.01 0.19 -0.06 0.1 0.05 -0.01 -0.02 -0.14 -0.11 -0.02 -0.13 -0.03 0.02 0.18 0.05 -0.08 -0.26 At2g40540 255829_at KT2 potassium transporter, putative 4 potassium ion transport

Membrane Transport | Other ion-coupled transporters



1.02 2.73
At1g08550 0.579 NPQ1 Violaxanthin deepoxidase involved in xanthophyll cycle.Two major consequences of the npq1 mutation are the absence of zeaxanthin formation in strong light and the partial inhibition of the quenching of singlet excited chlorophylls in the photosystem II li -0.21 0.14 0.05 0.05 -0.34 -0.02 -0.08 -0.32 0.23 0.07 -0.15 0.04 0.07 -0.17 0 -0.09 -0.46 -0.22 -0.06 0.02 0.03 -0.38 -0.1 0.12 0.17 0.4 -0.15 -0.25 0.4 -0.15 -0.25 -0.02 0.2 -0.01 -0.28 -0.04 0.09 -0.13 0.05 0.06 0.15 0.02 0.08 0.04 0.33 -0.06 0.19 0.05 0.34 0.08 0.25 0.18 0.17 0.03 -0.54 0.06 -0.28 0.18 0.13 -0.03 0.07 0.16 -0.77 -0.39 -0.68 -0.51 -0.14 0.47 0.23 0.27 -1.79 0.17 0.06 0.22 0.63 0.03 0.25 0.17 0.3 -0.01 0.37 0.43 0.44 0.23 0.14 0.23 0.13 0.15 0.13 0.02 -1.25 0.28 0.39 0.47 -0.46 0.46 -0.22 -0.19 0.32 0.13 -0.34 -0.19 -0.65 0.48 0.07 At1g08550 264799_at NPQ1 Violaxanthin deepoxidase involved in xanthophyll cycle.Two major consequences of the npq1 mutation are the absence of zeaxanthin formation in strong light and the partial inhibition of the quenching of singlet excited chlorophylls in the photosystem II li 10 violaxanthin de-epoxidase activity | xanthophyll cycle | xanthophyll metabolism | photosystem II (sensu Viridiplantae)
carotenoid biosynthesis | xanthophyll cycle
Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Carotenoid biosynthesis
Carotenoid and abscisic acid metabolism | carotenid biosynthesis
0.97 2.42
At1g17220 0.579
Similar to Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) from Phaseolus vulgaris -0.23 0.11 0.02 0.1 -0.16 0.03 -0.02 0.02 0 -0.12 -0.2 -0.15 -0.17 -0.23 -0.17 -0.32 -0.12 -0.3 -0.3 -0.07 -0.41 -0.41 -0.01 0.23 0.04 -0.19 0.01 0.11 -0.19 0.01 0.11 0.02 0.03 -0.09 0.06 0.02 0.06 -0.5 0.3 0.18 0.14 0.21 0.23 0.32 0.34 0.22 0.03 0.19 0.22 0.15 0.21 0.27 0.26 0.06 -0.18 0.11 0.06 0.27 0.22 0.18 0.28 0.28 -0.46 -0.21 -0.38 -0.12 0.19 -0.08 0.27 0.31 -1.62 -0.23 0.06 0.11 0.16 0.37 0.03 0.28 -0.17 -0.43 0.23 0.15 0.24 0.19 0.05 0.11 0.16 0.11 0.13 -0.02 -1.67 0.36 0.41 0.46 -0.42 0.12 -0.25 -0.03 0.15 0.13 -0.43 0.21 -0.26 -0.03 0.63 At1g17220 262483_at
Similar to Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) from Phaseolus vulgaris 4


Translation factors Translation (chloroplast)


0.76 2.31
At3g10230 0.578 LYC Encodes lycopene cyclase which catalyzes the formation of beta rings in lycopene. -0.04 0.09 0.4 -0.12 0.16 0.03 0.01 0 0.13 -0.15 -0.02 0.09 -0.02 -0.15 -0.05 -0.27 -0.13 0.02 0 0.19 0.02 -0.22 0.04 0.05 -0.01 0.16 -0.03 -0.06 0.16 -0.03 -0.06 -0.02 -0.2 -0.42 -0.19 -0.12 0.12 -0.48 0.22 0.08 0.12 -0.14 0.21 0 0.3 0.2 0.18 -0.03 0.32 0.08 -0.1 0.09 0.14 0.2 -0.43 0.22 -0.07 0.05 0.11 0.03 0.06 0.19 -0.63 0 -0.55 0 0.07 -0.1 0.32 0.36 -0.62 0.24 0.12 0.17 0.05 0.14 -0.01 0.31 -0.14 -0.34 0.13 -0.35 -0.16 0.11 0.11 -0.09 0.15 0.05 0.11 -0.12 -0.23 0.05 0.19 -0.02 -0.25 -0.08 0 -0.14 0.14 0 -0.28 -0.05 -0.16 0.21 0.36 At3g10230 259140_at LYC Encodes lycopene cyclase which catalyzes the formation of beta rings in lycopene. 10 carotene biosynthesis | lycopene beta cyclase activity
carotenoid biosynthesis Biosynthesis of steroids Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Carotenoid biosynthesis
Carotenoid and abscisic acid metabolism | carotenid biosynthesis
0.72 1.03
At4g30950 0.576 FAD6 omega-6 fatty acid desaturase; Chloroplastic enzyme responsible for the synthesis of 16:2 and 18:2 fatty acids from galactolipids, sulpholipids and phosphatidylglycerol. Uses ferredoxin as electron donor. Gene mutation resulted in reduced level of unsaturated fatty acids leading to sus -0.17 0.07 0.12 0.12 0.01 0.05 0.05 0.07 -0.02 -0.09 -0.14 -0.05 -0.12 -0.14 -0.06 -0.17 -0.06 -0.05 -0.16 -0.05 -0.11 -0.24 0.01 0.08 -0.03 0.05 -0.11 -0.16 0.05 -0.11 -0.16 0.03 -0.03 -0.13 0.03 0.01 0.25 -0.36 0.16 0.15 0.01 0.33 0.14 0.01 0.17 0.08 -0.02 0.18 0.17 0.07 -0.02 0.11 0.19 0.2 -0.01 0.15 -0.09 0.24 0.18 0.1 -0.06 -0.07 -0.93 0.01 -0.21 0.05 0.01 -0.04 -0.04 0.1 -0.91 0.28 0.04 0.06 0.05 0.06 0.06 -0.16 0.24 0.28 -0.09 -0.07 0.16 0.2 0.13 0.07 -0.01 0.14 -0.02 0.01 -0.41 0.13 0.36 0.14 -0.19 0.13 -0.01 -0.17 0.19 0.06 -0.12 0.12 -0.11 -0.05 -0.22 At4g30950 253547_at FAD6 omega-6 fatty acid desaturase; Chloroplastic enzyme responsible for the synthesis of 16:2 and 18:2 fatty acids from galactolipids, sulpholipids and phosphatidylglycerol. Uses ferredoxin as electron donor. Gene mutation resulted in reduced level of unsaturated fatty acids leading to sus 10 omega-6 fatty acid desaturase activity | photoinhibition | photoinhibition | fatty acid biosynthesis lipid, fatty acid and isoprenoid metabolism phospholipid desaturation pathway | glycosylglyceride desaturation pathway Androgen and estrogen metabolism | 1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation | Benzoate degradation via hydroxylation Leaf Glycerolipid Biosynthesis | Leaf Glycerolipid Biosynthesis in Plastid Synthesis of membrane lipids in plastids

0.46 1.28
At1g48030 0.570
dihydrolipoamide dehydrogenase 1, mitochondrial / lipoamide dehydrogenase 1 (MTLPD1) -0.11 0.03 -0.05 0.07 -0.12 0.04 -0.04 -0.17 -0.09 -0.01 -0.38 -0.14 -0.25 -0.36 -0.19 -0.17 -0.2 -0.31 -0.23 -0.18 -0.3 -0.26 -0.13 0.11 0.02 0.15 0.14 0.09 0.15 0.14 0.09 -0.09 -0.14 -0.26 0.05 0 0.06 -0.39 0.3 0.1 0.28 0.18 0.22 -0.01 0.16 -0.01 0.1 0.18 0.3 0.18 0.23 0.19 0.53 0.46 -0.05 0.09 0.19 0.36 0.12 0.05 0.24 0.2 -0.5 -0.39 -0.54 -0.39 -0.05 0.41 0.14 0.11 -0.3 -0.15 0.04 0.07 -0.03 0.09 0.1 0.1 0.08 -0.09 -0.01 -0.08 -0.05 0.24 0.16 0.04 0.13 0.11 0.13 0.15 -0.54 0.06 0.09 0.04 -0.24 0.05 -0.05 0.02 0.05 -0.04 -0.1 0.06 0.03 0.08 -0.15 At1g48030 260730_at
dihydrolipoamide dehydrogenase 1, mitochondrial / lipoamide dehydrogenase 1 (MTLPD1) 10 response to light C-compound and carbohydrate metabolism | tricarboxylic-acid pathway (citrate cycle, Krebs cycle, TCA cycle)
Glycolysis / Gluconeogenesis | Citrate cycle (TCA cycle) | Pyruvate metabolism | Glycine, serine and threonine metabolism Intermediary Carbon Metabolism metabolism of acyl-lipids in mitochondria

0.68 1.07
At1g01090 0.559 PDH-E1 ALPHA pyruvate dehydrogenase E1 alpha subunit -0.02 0.05 0.09 0.15 0.03 0.14 0.2 0.07 0.04 0.08 -0.12 -0.03 -0.02 0.03 -0.16 -0.21 -0.14 -0.21 -0.06 -0.11 -0.3 -0.26 -0.11 0 0 0.14 0.12 0.16 0.14 0.12 0.16 -0.04 -0.31 -0.2 0.22 0.07 0.28 -0.19 0.05 0.06 0.04 -0.03 0.05 0.07 0.05 -0.02 0.02 0.19 0.17 0.01 -0.02 0.01 0.05 0.2 0.02 0.07 0.09 0.04 -0.02 0.05 0.1 0.03 -0.86 -0.18 -0.37 -0.11 0.02 -0.41 -0.13 0.11 -0.56 -0.28 0.02 0.03 -0.06 -0.12 0.16 0.03 0 -0.12 -0.03 0.01 0.15 0.17 0.09 0.01 0.08 -0.03 0.05 0.09 0.48 0.01 -0.02 0.03 0.31 0.08 0.09 0.17 0.05 0.1 0.22 0.18 0.2 -0.28 -0.44 At1g01090 261583_at PDH-E1 ALPHA pyruvate dehydrogenase E1 alpha subunit 4
C-compound and carbohydrate metabolism | tricarboxylic-acid pathway (citrate cycle, Krebs cycle, TCA cycle)
Glycolysis / Gluconeogenesis | Pyruvate metabolism | Butanoate metabolism | Valine, leucine and isoleucine biosynthesis Intermediary Carbon Metabolism Synthesis of fatty acids in plastids

0.51 1.34
At4g18240 0.559
contains similarity to starch synthase (Vigna unguiculata) -0.21 0.06 0.3 -0.08 -0.32 0.13 0.19 -0.21 -0.01 0.12 -0.14 0.12 0.09 -0.11 -0.02 -0.09 -0.18 -0.25 0.14 -0.07 -0.14 -0.14 -0.01 0 -0.13 -0.02 0.24 0.47 -0.02 0.24 0.47 -0.06 0.42 0.19 -0.27 -0.3 -0.06 -0.1 0.38 0.2 0.24 0.27 0.28 0.22 0.21 0.08 0 0.17 -0.03 0.19 0.51 0.08 0.12 0 -0.19 -0.13 -0.19 0.11 0.11 -0.04 0.14 0.18 -0.6 -0.45 -0.77 -0.72 0.17 0.38 -0.04 0.06 -1.47 -0.33 0.28 -0.03 0.44 0.04 0.26 -0.11 -0.05 0.19 -0.01 0.42 -0.1 -0.01 0.21 -0.03 0.22 -0.02 0.12 -0.09 -0.53 0.24 -0.05 0.16 -0.11 0.08 -0.11 0.04 -0.23 0.04 -0.17 -0.21 -0.51 0.12 0.18 At4g18240 254659_at
contains similarity to starch synthase (Vigna unguiculata) 4
C-compound and carbohydrate metabolism

Cell Wall Carbohydrate Metabolism | starch metabolism


0.91 1.98
At2g42600 0.556 ATPPC2 Encodes one of four Arabidopsis phosphoenolpyruvate carboxylase proteins. -0.06 0.2 0.24 0.09 -0.1 0.07 0.24 -0.01 0.05 -0.01 -0.12 -0.04 -0.08 -0.12 -0.07 -0.24 -0.64 -0.11 -0.09 -0.11 -0.08 -0.23 -0.37 0.2 0.34 -0.13 -0.47 -0.22 -0.13 -0.47 -0.22 0.14 0.02 0.1 0.19 0.12 0.06 -0.49 0.5 0.4 0.5 0.27 0.28 0.22 0.57 0.18 0.17 0.12 0.1 0.07 0.4 -0.13 0.51 0.35 -0.52 0.22 -0.12 0.49 0.3 0.21 0.18 0.44 -0.41 -0.09 -0.61 -0.12 0.05 0.01 -0.53 -0.09 -0.73 -0.2 0.11 0.21 0.25 -0.09 -0.03 -0.51 -0.43 -1.11 0.28 -0.46 0.36 0.26 0.18 0.32 0.17 0.48 0.33 -0.18 -0.51 -0.07 0.11 0.02 -0.39 0.02 0.06 -0.03 0.23 0.09 -0.26 0.03 0.01 0.05 0.03 At2g42600 263491_at ATPPC2 Encodes one of four Arabidopsis phosphoenolpyruvate carboxylase proteins. 4
C-compound and carbohydrate metabolism | glycolysis and gluconeogenesis gluconeogenesis | asparagine degradation I | aspartate degradation I | phenylalanine degradation I | serine-isocitrate lyase pathway | formaldehyde assimilation I (serine pathway) | mixed acid fermentation | acetyl-CoA assimilation | TCA cycle variation VII | TCA cycle variation VIII | TCA cycle variation II | TCA cycle variation IV Pyruvate metabolism | Carbon fixation | Reductive carboxylate cycle (CO2 fixation) Intermediary Carbon Metabolism


0.98 1.68
At1g28440 0.554
leucine-rich repeat transmembrane protein kinase family protein -0.08 0.18 0.06 -0.07 -0.08 -0.04 0.05 0.06 0 -0.19 0.16 -0.1 -0.2 -0.62 -0.05 -0.59 -0.28 -0.16 -0.28 0.06 -0.22 -0.41 -0.36 0.25 0.32 0.08 -0.03 0.1 0.08 -0.03 0.1 0.11 0.07 0.18 0.39 0.42 0.4 -0.01 -0.08 0.28 0.09 0.11 0.08 -0.02 -0.19 0.1 0.09 0.21 0.19 0.03 -0.15 0.16 -0.01 0.33 -0.53 0.18 0.04 -0.03 0 -0.04 -0.38 0.32 -0.83 0.03 -0.7 0.14 -0.01 0.07 -0.1 -0.18 -0.98 -0.05 0.18 -0.22 0.18 0.18 0.08 -0.34 0.16 0.04 0.1 0.22 0.21 0.17 0.15 -0.01 0.4 0 0.25 0.43 0.02 0.15 -0.09 0.31 0.16 0.19 0.17 0.24 0.12 0.07 0.19 0.24 0.13 -0.15 -1.31 At1g28440 261498_at
leucine-rich repeat transmembrane protein kinase family protein 2


Inositol phosphate metabolism | Nicotinate and nicotinamide metabolism | Benzoate degradation via CoA ligation



0.91 1.74
At5g49030 0.544
tRNA synthetase class I (I, L, M and V) family protein -0.15 0.07 -0.04 0.11 -0.17 0.02 0.08 0 -0.03 0 -0.02 0.02 -0.12 -0.24 0.06 -0.15 -0.22 -0.22 0.01 -0.03 -0.07 -0.33 0.01 0.04 0.02 0.17 0.15 0.37 0.17 0.15 0.37 0 0.03 0.21 0 -0.12 0.19 -0.46 0.18 -0.1 0.11 -0.22 0.12 0.12 0.26 0.01 0.05 0.05 -0.1 0.28 0 0.01 0.09 -0.05 0.13 0.12 0.01 0.17 0.22 0.23 0.24 0.37 -0.4 -0.2 -0.52 -0.31 0.17 0.05 0.13 0.15 -1.28 -0.23 0.08 -0.1 0.44 0.12 0.02 -0.12 0.47 -0.42 -0.09 -0.13 -0.16 0.17 0.13 0.05 0.2 0.35 0.01 0.09 -0.75 0.03 0.26 0.13 -0.23 -0.05 -0.25 0.07 0.1 0.07 0.11 0.07 -0.38 -0.31 0.26 At5g49030 248634_at
tRNA synthetase class I (I, L, M and V) family protein 2

tRNA charging pathway Valine, leucine and isoleucine biosynthesis | Aminoacyl-tRNA biosynthesis



0.73 1.74
At1g12800 0.543
S1 RNA-binding domain-containing protein -0.08 0.06 -0.05 0.13 -0.14 -0.08 0.14 0 0.06 0.03 -0.23 -0.06 0.03 -0.09 -0.02 0.03 0.05 -0.19 0.01 -0.06 -0.24 -0.18 0.04 -0.06 -0.25 -0.04 0.34 0.55 -0.04 0.34 0.55 0.23 0.4 -0.3 -0.11 -0.15 0.22 -0.38 0.28 -0.15 0.14 -0.04 0.28 0.1 0.13 -0.06 0.27 0.2 0.04 0.11 0.13 0.01 0.16 0.02 -0.03 0.13 0.31 0.28 0.27 0.15 0.19 0.49 -0.76 0.48 0.23 0.31 -0.11 0.24 -0.36 -0.21 -1.85 -0.14 0.32 -0.02 0.13 0.28 -0.15 -0.49 0.19 -0.48 -0.01 0 0.03 0.02 -0.04 0.18 0.27 0.17 -0.06 -0.18 -1.34 0 0.22 0.03 -0.36 0.07 -0.27 -0.14 0.09 -0.19 -0.24 -0.18 -0.33 0.3 0.43 At1g12800 261206_at
S1 RNA-binding domain-containing protein 2

Calvin cycle | mannitol degradation | sorbitol fermentation | sorbitol degradation | fructose degradation (anaerobic) | acetate fermentation | glycolysis I | glycolysis IV




0.77 2.40
At2g47450 0.541 CAO A component of the chloroplast signal recognition particle pathway that is involved in LHCP targeting. Fullname CHAOS is an abbreviation of chlorophyll a/b binding protein harvesting-organelle specific. -0.14 0.18 0.18 0.18 -0.09 0.26 0.14 0.04 0.22 0.28 0.25 0.22 -0.06 -0.87 0.15 -0.13 -0.02 0.13 -0.02 0.04 0.08 -0.21 0.06 0.31 0.1 0.33 0.62 0.66 0.33 0.62 0.66 -0.03 -0.43 -0.86 -0.28 -0.28 0.37 -0.38 -0.14 0.25 0.13 0.27 -0.01 0.21 -0.02 0.43 0 0.35 0.04 0.01 -0.4 0.28 -0.12 -0.14 -0.63 0.16 -0.11 -0.17 -0.01 0.04 -0.32 0.28 -1.84 0.07 -0.61 0.16 -0.42 0.24 -0.21 -0.11 -0.96 0.14 0.17 0.25 0.97 -0.13 -0.3 -0.14 -0.93 -0.48 0.11 0.15 0.11 -0.03 -0.12 0.4 0.09 0.14 -0.02 0.11 -1.33 0.04 0.14 0.22 -0.08 -0.2 0.54 -0.2 0.34 0.33 -0.23 0.35 -0.18 0.64 -0.18 At2g47450 245123_at CAO A component of the chloroplast signal recognition particle pathway that is involved in LHCP targeting. Fullname CHAOS is an abbreviation of chlorophyll a/b binding protein harvesting-organelle specific. 10 chloroplast thylakoid membrane protein import


Pathway for nuclear-encoded, thylakoid-localized proteins | SRP (signal recognition particle)-dependent pathway for integral membrane proteins


1.42 2.81
At5g09660 0.539
encodes a microbody NAD-dependent malate dehydrogenase -0.05 0.08 0.14 0.07 -0.15 -0.18 0.11 -0.08 -0.01 -0.07 -0.22 -0.04 -0.11 -0.11 -0.14 -0.18 -0.45 -0.04 -0.16 -0.05 -0.22 -0.1 -0.07 0.15 -0.19 -0.19 -0.22 -0.3 -0.19 -0.22 -0.3 0.2 0.11 -0.41 -0.23 -0.33 -0.07 -0.62 0.18 0.25 0.33 0.39 0.13 0.25 0.44 0.2 0.13 0.23 0.18 0.1 0.37 0.44 0.13 0.28 -0.1 0.19 -0.12 0.19 0.09 0.14 0.03 0.01 -0.82 0.25 0.14 0.35 -0.24 -0.22 0.16 0.21 -0.76 0.08 0.08 0.08 0.08 0.08 0.08 0 -0.57 -0.36 -0.01 -0.05 0.13 0.17 0.04 0.13 0.05 0.03 0.1 0.15 -0.31 0.31 0.25 0.24 -0.06 0.08 0 -0.03 0.01 0.11 -0.06 0.35 -0.06 0.27 -0.06 At5g09660 250498_at
encodes a microbody NAD-dependent malate dehydrogenase 6
C-compound and carbohydrate metabolism | tricarboxylic-acid pathway (citrate cycle, Krebs cycle, TCA cycle) | biogenesis of chloroplast gluconeogenesis | aspartate degradation II | phenylalanine degradation I | serine-isocitrate lyase pathway | formaldehyde assimilation I (serine pathway) | mixed acid fermentation | acetyl-CoA assimilation | glyoxylate cycle | TCA cycle variation VII | TCA cycle variation VIII | TCA cycle variation II | TCA cycle variation IV | TCA cycle -- aerobic respiration Citrate cycle (TCA cycle) | Pyruvate metabolism | Glyoxylate and dicarboxylate metabolism | Carbon fixation | Reductive carboxylate cycle (CO2 fixation) Intermediary Carbon Metabolism | Gluconeogenesis from lipids in seeds


0.75 1.27
At5g62790 0.537 DXR 1-Deoxy-d-xylulose 5-phosphate reductoisomerase (DXR) catalyzes the first committed step of the 2-C-methyl-d-erythritol 4-phosphate pathway for isoprenoid biosynthesis. In Arabidopsis, DXR is encoded by a single-copy gene. -0.31 0.08 0.18 0.15 -0.18 0.15 0.14 -0.13 -0.08 0.09 -0.15 0.04 -0.06 0.28 -0.04 -0.11 -0.02 -0.12 -0.15 -0.2 -0.22 -0.23 -0.08 -0.01 -0.12 -0.07 -0.19 -0.07 -0.07 -0.19 -0.07 0 -0.07 -0.49 0 -0.03 0.06 -0.49 0.4 0.15 0.07 0 0.27 0.27 0.28 0.08 0.12 0.17 0.2 0.38 0.22 0.21 0.18 0.25 -0.14 0.27 0.13 0.52 0.18 0.25 0.27 0.24 -0.56 0.15 -0.13 0.08 -0.27 0.19 -0.33 -0.04 -0.56 0.13 0.1 0.11 -0.14 -0.14 -0.05 -0.46 0.45 -0.08 0.07 -0.13 -0.02 0.09 0.04 0.11 0.07 0.24 0.12 0 -0.86 0.13 0.27 0.04 -0.13 0.04 -0.05 -0.12 0.11 -0.1 -0.03 -0.08 -0.23 -0.07 -0.12 At5g62790 247401_at DXR 1-Deoxy-d-xylulose 5-phosphate reductoisomerase (DXR) catalyzes the first committed step of the 2-C-methyl-d-erythritol 4-phosphate pathway for isoprenoid biosynthesis. In Arabidopsis, DXR is encoded by a single-copy gene. 10 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity | isoprenoid biosynthesis lipid, fatty acid and isoprenoid biosynthesis | isoprenoid biosynthesis isopentenyl diphosphate biosynthesis -- mevalonate-independent Biosynthesis of steroids Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Biosynthesis of prenyl diphosphates
IPP (isopentenyl diphosphate) and DMAPP (dimethylallyl diphosphat) biosynthesis | MEP (methylerythritol P) pathway, plastids
0.71 1.38
At3g60240 0.536 EIF4G protein synthesisinitiation factor 4G (EIF4G). A mutation in this gene (cum2-1) results in decreased accumulation of CMV coat protein in upper, uninoculated leaves. Likely affects cell-to-cell movement of the virus, also affects TCV multiplication. 0.08 0.09 0.01 -0.04 0.25 -0.07 -0.07 0.27 0.02 -0.06 0.14 0.03 0.02 0.05 -0.17 -0.16 0.17 -0.16 -0.12 0.33 -0.23 -0.35 0.04 0.39 0.63 -0.01 0.11 0.32 -0.01 0.11 0.32 -0.06 -0.17 0.37 -0.03 -0.07 -0.07 -0.15 0.07 0.09 0.28 0.22 0.18 0.07 0.14 0.08 0.16 0.02 -0.16 0.06 0.01 0.02 0.2 0.02 -0.1 -0.06 0.05 0.15 0.23 -0.11 -0.1 0.18 -1.72 0.13 -0.14 0.14 0.21 0.12 0.14 0.09 -0.76 -0.1 -0.07 0.04 0.07 0.14 -0.01 -0.3 -0.35 -0.59 0.33 0.24 -0.08 0.03 0.12 0.18 0.02 0.13 -0.04 -0.07 -0.05 0.07 0.16 -0.04 -0.04 0.04 -0.07 0.02 -0.04 0.16 -0.02 -0.21 -0.23 -0.69 -0.43 At3g60240 251431_at EIF4G protein synthesisinitiation factor 4G (EIF4G). A mutation in this gene (cum2-1) results in decreased accumulation of CMV coat protein in upper, uninoculated leaves. Likely affects cell-to-cell movement of the virus, also affects TCV multiplication. 6 response to virus

Translation factors



0.68 2.35
At2g42690 0.530
lipase, putative, similar to lipase from Dianthus caryophyllus -0.45 0.25 0.08 0.06 -0.41 0.02 -0.23 -0.05 0.01 -0.17 -0.08 -0.15 -0.04 -0.85 -0.25 -0.44 -0.94 -0.21 0.04 -0.17 -0.14 0.26 -0.25 0.42 0.42 0.25 0.25 0.43 0.25 0.25 0.43 0.18 -0.46 -0.42 0 -0.15 -0.03 -0.33 0.15 -0.13 0.11 0.37 0.18 0.03 0.37 0.2 0.19 0.03 0.57 0.26 0.41 0.21 0.13 0.39 -0.25 0.13 0.17 0.23 0.08 -0.12 0.3 0.22 0.07 -0.64 -1.04 -0.76 0.14 -0.07 -0.01 -0.12 -1.32 -0.18 -0.13 0.14 0.48 0.23 0.2 0.15 -0.71 -0.95 -0.18 0.3 0.12 0.14 0.04 0.06 0.32 0.02 0.23 0.27 -0.73 0.47 0.43 0.34 -0.48 0.38 0.14 0.35 0.25 0.55 -0.39 0.36 -0.4 0.48 -0.17 At2g42690 263987_at
lipase, putative, similar to lipase from Dianthus caryophyllus 2

triacylglycerol degradation
Gluconeogenesis from lipids in seeds Lipid signaling

1.19 1.90
At1g03310 0.529
Encodes a protein with strong similarity to isoamylase (EC:3.2.1.68) however lacks critical residues known to be important for activity. Appears to co localize with ISA1 in the chloroplast isoamylase complex. -0.04 0.23 0.07 0.1 -0.04 0.09 0.35 0.16 0.26 0.32 0.06 0.08 0.11 -0.1 0.06 0.04 -0.19 -0.08 0.02 -0.07 0.08 0.04 -0.14 0.36 0.38 -0.02 -0.44 -0.38 -0.02 -0.44 -0.38 0.21 0.22 0.35 -0.02 0.04 0.11 0 0.45 -0.07 0.39 -0.06 0.43 0.1 0.26 0.13 0.31 0.07 0.04 0.25 0.51 0.13 0.64 0.16 -0.93 0.26 -0.2 0.62 0.27 0.21 0.1 0.62 -1.37 -0.41 -1.11 -0.7 -0.38 0.5 -0.3 -0.15 -1.21 0.18 0.33 0.28 0.09 0.28 0.08 -0.78 -0.3 -0.52 -0.05 0.09 -0.27 0.22 0.15 0.34 0.25 0.39 0.16 0.23 -1.6 0.23 0.31 0.23 -1.6 0.23 -0.37 0.23 0.31 0.23 -0.46 0.23 -0.44 0.67 -0.28 At1g03310 264360_at
Encodes a protein with strong similarity to isoamylase (EC:3.2.1.68) however lacks critical residues known to be important for activity. Appears to co localize with ISA1 in the chloroplast isoamylase complex. 7 isoamylase activity
starch degradation




1.39 2.27
At3g54660 0.529 GR Encodes glutathione reductase that is most likely localized in the chloroplast. -0.03 0.08 0.09 0.01 -0.18 0.01 -0.01 -0.2 0.07 -0.02 -0.14 0.07 -0.12 -0.02 0.08 -0.13 0.04 0.06 -0.18 -0.08 -0.08 -0.31 -0.07 0.19 0.13 0.12 0.14 -0.13 0.12 0.14 -0.13 0.01 0.08 -0.28 0.14 0 0.1 -0.48 0.09 0.1 -0.02 0.26 0.09 0.24 0.12 0.17 0 0.28 0.28 0.13 -0.01 0.12 0.14 0.15 -0.16 0.01 -0.09 0.21 0.09 0.04 0.18 0.02 -0.74 -0.1 -0.18 0.1 -0.56 0.36 -0.36 -0.27 -0.43 0 0.05 0.02 -0.03 0.22 0.09 -0.04 -0.33 -0.43 0.09 -0.26 0.07 0.17 -0.1 0.07 0.04 0.13 0.09 -0.1 -0.03 0.02 0.37 0.07 -0.07 -0.13 0.12 -0.08 0.18 -0.05 -0.08 0.02 0.13 0.18 0.21 At3g54660 251860_at GR Encodes glutathione reductase that is most likely localized in the chloroplast. 10 glutathione-disulfide reductase activity | glutathione metabolism ionic homeostasis | biogenesis of chloroplast formylTHF biosynthesis | ascorbate glutathione cycle | photorespiration Glutamate metabolism | Glutathione metabolism Biosynthesis of Amino Acids and Derivatives | Glutathione metabolism


0.59 1.11
At3g42050 0.527
vacuolar ATP synthase subunit H family protein -0.06 0.03 -0.05 0 -0.04 0.09 0.02 -0.05 0.05 0.03 -0.06 -0.03 -0.04 -0.06 -0.07 -0.18 -0.08 -0.09 -0.25 -0.09 -0.09 -0.23 -0.02 0.04 -0.05 0.12 0.06 0.03 0.12 0.06 0.03 -0.12 -0.18 -0.28 0.22 0.11 0.14 -0.31 0.07 0.13 0.22 0.18 0.15 0.06 0 0.1 0.1 0.16 0.02 0.1 0.04 0.04 0.23 0.23 -0.11 0.14 -0.03 0.14 0.08 0.04 -0.03 0.11 -0.51 -0.24 -0.38 -0.2 0.17 0.26 0.16 0.17 -0.34 0.15 -0.06 0.12 0.11 -0.08 -0.09 -0.05 0.28 0.19 0.1 -0.01 0.03 0.11 0.1 -0.04 0.04 0.21 0.02 0.02 -0.1 -0.07 -0.12 -0.03 -0.09 -0.08 0.03 -0.03 -0.06 -0.01 -0.06 -0.01 -0.09 -0.23 -0.16 At3g42050 252845_at
vacuolar ATP synthase subunit H family protein 2
transport facilitation | transport ATPases
ATP synthesis



0.46 0.79
At5g65010 0.524 ASN2 asparagine synthetase 0.33 0.25 0.15 0.06 -0.11 0.32 -0.01 -0.2 0.25 0.21 -0.05 0.16 0.05 -1.17 0.18 -0.31 -0.38 0.25 -0.11 0.4 0.17 -0.24 -0.56 0.26 0.22 0.32 0.03 0.95 0.32 0.03 0.95 0.38 0.12 0.45 0.19 -0.22 0.01 -0.35 -0.03 0.18 0.25 0.12 0.21 0.41 0.22 0.19 0.16 0.27 -0.04 0.26 0.1 0.2 0.39 0.4 -0.48 0.05 0.07 0.33 0.06 0.22 0.2 -0.01 -1.36 -0.07 -0.59 0.03 0.02 0.57 -0.52 -0.14 -1.18 -0.68 0.23 -0.06 0.17 0.23 0.08 -0.22 0.17 -0.39 0.1 -0.38 0.05 0.24 0.23 0.35 0.27 0.33 0.24 0.25 -2.13 0.25 0.53 0.25 -1.84 0.25 -0.22 0.25 0.97 0.25 -1.77 0.25 -1.44 0.05 -0.59 At5g65010 247218_at ASN2 asparagine synthetase 10
amino acid metabolism UDP-N-acetylglucosamine biosynthesis Nitrogen metabolism | Alanine and aspartate metabolism | Cyanoamino acid metabolism Biosynthesis of Amino Acids and Derivatives | aspartate/ornithin cycle / nitric oxid from glutamate


1.62 3.10
At4g14210 0.518 PDS3 Encodes phytoene desaturase (phytoene dehydrogenase), an enzyme that catalyzes the desaturation of phytoene to zeta-carotene during carotenoid biosynthesis. Processed protein is localized to the plastd. -0.12 0.05 0.09 0.05 -0.1 -0.15 0.08 0.05 -0.15 -0.03 -0.23 -0.21 -0.11 0.1 -0.28 -0.25 -0.3 -0.31 -0.2 0.04 -0.31 -0.31 0 -0.07 -0.33 0.44 0.1 0.47 0.44 0.1 0.47 -0.12 -0.13 -0.2 -0.22 -0.14 -0.02 -0.54 0.03 0.14 0.07 0.13 0 0.21 0.11 0.17 0.02 0.12 -0.01 0.2 -0.02 0.21 0.05 0.04 -0.19 0.05 -0.07 0.15 0.03 -0.06 -0.07 0.04 -0.98 -0.12 -0.4 -0.24 -0.15 0.31 -0.06 0.05 -0.71 -0.03 0.28 0.31 0.45 0.31 0.31 -0.15 0.4 -0.18 0.04 0 -0.05 0.25 0.15 0.08 0.19 0.01 0.03 0.19 -0.65 0.22 0.24 0.31 -0.28 0.17 -0.28 0.22 0.17 0.07 -0.31 0.27 -0.09 0.03 0.6 At4g14210 245284_at PDS3 Encodes phytoene desaturase (phytoene dehydrogenase), an enzyme that catalyzes the desaturation of phytoene to zeta-carotene during carotenoid biosynthesis. Processed protein is localized to the plastd. 8 phytoene dehydrogenase activity | carotenoid biosynthesis biosynthesis of vitamins, cofactors, and prosthetic groups | secondary biosynthesis of derivatives of homoisopentenyl pyrophosphate | biogenesis of chloroplast carotenoid biosynthesis Biosynthesis of steroids Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Carotenoid biosynthesis
Carotenoid and abscisic acid metabolism | carotenid biosynthesis
0.75 1.57
At1g56190 0.516
similar to Phosphoglycerate kinase, chloroplast precursor from Chlamydomonas reinhardtii 0.03 0.07 -0.02 -0.06 -0.09 -0.05 -0.05 -0.09 0.02 -0.03 -0.07 -0.17 -0.03 -0.26 -0.19 -0.16 -0.2 -0.25 -0.1 -0.03 -0.18 -0.19 -0.04 0.01 0.03 -0.05 -0.13 0.17 -0.05 -0.13 0.17 0.04 -0.31 -0.1 0.03 -0.13 -0.01 -0.39 0.34 -0.07 0.24 0.05 0.1 0.14 0.31 -0.12 -0.03 0.03 0.21 0.16 0.23 -0.05 0.56 0.4 -0.02 0.08 0.26 0.4 0.14 -0.02 0.27 0.31 -0.83 -0.17 -0.27 -0.26 -0.1 0.54 -0.07 -0.01 -0.74 -0.43 -0.1 -0.16 0.02 0.11 -0.11 -0.19 0.38 0.46 0.16 0.07 0 0.05 -0.04 0.17 0.15 0.11 0 -0.01 -0.21 -0.12 0.12 0.01 -0.16 0.11 -0.04 -0.13 0.27 -0.06 0 -0.14 -0.1 0.34 0.44 At1g56190 256228_at (m)
similar to Phosphoglycerate kinase, chloroplast precursor from Chlamydomonas reinhardtii 4
C-compound and carbohydrate metabolism | glycolysis and gluconeogenesis | photosynthesis gluconeogenesis | glycerol degradation II | Calvin cycle | sorbitol fermentation | fructose degradation (anaerobic) | acetate fermentation | glycolysis I | glyceraldehyde 3-phosphate degradation | glycolysis IV Glycolysis / Gluconeogenesis | Carbon fixation Intermediary Carbon Metabolism


0.66 1.39
At3g12780 0.516 PGK1 phosphoglycerate kinase, putative 0.03 0.07 -0.02 -0.06 -0.09 -0.05 -0.05 -0.09 0.02 -0.03 -0.07 -0.17 -0.03 -0.26 -0.19 -0.16 -0.2 -0.25 -0.1 -0.03 -0.18 -0.19 -0.04 0.01 0.03 -0.05 -0.13 0.17 -0.05 -0.13 0.17 0.04 -0.31 -0.1 0.03 -0.13 -0.01 -0.39 0.34 -0.07 0.24 0.05 0.1 0.14 0.31 -0.12 -0.03 0.03 0.21 0.16 0.23 -0.05 0.56 0.4 -0.02 0.08 0.26 0.4 0.14 -0.02 0.27 0.31 -0.83 -0.17 -0.27 -0.26 -0.1 0.54 -0.07 -0.01 -0.74 -0.43 -0.1 -0.16 0.02 0.11 -0.11 -0.19 0.38 0.46 0.16 0.07 0 0.05 -0.04 0.17 0.15 0.11 0 -0.01 -0.21 -0.12 0.12 0.01 -0.16 0.11 -0.04 -0.13 0.27 -0.06 0 -0.14 -0.1 0.34 0.44 At3g12780 256228_at (m) PGK1 phosphoglycerate kinase, putative 4
C-compound and carbohydrate metabolism | glycolysis and gluconeogenesis | photosynthesis gluconeogenesis | glycerol degradation II | Calvin cycle | sorbitol fermentation | fructose degradation (anaerobic) | acetate fermentation | glycolysis I | glyceraldehyde 3-phosphate degradation | glycolysis IV Glycolysis / Gluconeogenesis | Carbon fixation Intermediary Carbon Metabolism


0.66 1.39
At3g50530 0.515 CRK similar to calcium/calmodulin-dependent protein kinase CaMK3 (Nicotiana tabacum); CDPK-related kinase -0.13 0.15 0 0.01 -0.04 0.06 0.04 0.19 0.01 0.12 0.24 0.14 -0.1 -0.43 -0.2 -0.52 -0.45 -0.01 0.2 0.27 0.12 0.1 0.5 0.01 0.09 0.31 0.41 0.49 0.31 0.41 0.49 -0.11 -0.11 0.65 0.01 0.07 -0.02 -0.35 0.05 0.09 0.08 0.21 0.05 0.14 0.14 0.02 0 0.28 0 0.1 -0.1 0.07 -0.01 0.22 -0.72 0.25 0.1 0.05 0.09 -0.02 -0.11 0.38 -1.28 0.19 -0.6 0.08 -0.28 0.14 -0.35 -0.43 -1.39 -0.24 0.21 -0.08 0.2 0.24 0.12 -0.75 0.3 0.08 0.26 -0.15 0.03 0.02 0.14 0.37 0.15 0.16 0.13 0.27 -0.35 0.13 0.14 0.1 -0.27 0.33 0.09 0.17 0.03 0.03 -0.31 0.09 -0.45 -0.1 -1.52 At3g50530 252158_at CRK similar to calcium/calmodulin-dependent protein kinase CaMK3 (Nicotiana tabacum); CDPK-related kinase 2
intracellular signalling
Inositol phosphate metabolism | Nicotinate and nicotinamide metabolism | Benzoate degradation via CoA ligation



0.99 2.17
At4g24620 0.515 PGI1 The PGI1 gene encodes the plastid phospho-glucose (Glc) isomerase. While pgi1-1 mutant has a deficiency in leaf starch synthesis, it accumulates starch in root cap cells. Flowering time of the pgi1-1 mutant is significantly delayed under short-day conditi -0.11 0.04 0.08 0.06 -0.17 0.04 0 -0.07 0.01 -0.13 -0.16 -0.11 -0.28 -0.24 -0.15 -0.22 -0.06 -0.26 -0.18 -0.08 -0.31 -0.4 -0.13 -0.03 0.04 -0.26 -0.01 -0.18 -0.26 -0.01 -0.18 0.09 0.05 -0.2 0.33 0.1 0.24 -0.27 0.28 0.19 0.42 0.38 0.14 0.28 0.24 0.06 0.16 0.27 0.19 0.24 0.36 0.16 0.28 -0.16 -0.13 0.08 -0.04 0.46 0.14 0.03 0.04 0.2 -0.48 -0.1 -0.49 -0.1 -0.16 0.76 0.08 0.16 -0.96 -0.05 -0.18 0.03 0.04 -0.15 -0.14 0.02 0.54 0.4 -0.03 -0.11 0.07 0.09 0.04 0.07 0.09 0.08 0.12 -0.04 0.12 -0.03 0 0.08 -0.12 0.07 -0.11 0.07 0.08 0.05 0.05 -0.12 -0.22 -0.19 -0.23 At4g24620 254141_at PGI1 The PGI1 gene encodes the plastid phospho-glucose (Glc) isomerase. While pgi1-1 mutant has a deficiency in leaf starch synthesis, it accumulates starch in root cap cells. Flowering time of the pgi1-1 mutant is significantly delayed under short-day conditi 6 positive regulation of flower development | starch metabolism C-compound and carbohydrate metabolism | glycolysis and gluconeogenesis | biogenesis of chloroplast gluconeogenesis | starch biosynthesis | ascorbate biosynthesis | sucrose degradation III | glycolysis I | glycolysis IV Glycolysis / Gluconeogenesis | Pentose phosphate pathway | Starch and sucrose metabolism Intermediary Carbon Metabolism | Cell Wall Carbohydrate Metabolism | trehalose metabolism


0.65 1.72
At4g13780 0.513
similar to methionyl-tRNA synthetase (Oryza sativa) 0.18 0.01 0 -0.07 0.05 0.08 0.16 0.11 0.06 -0.07 -0.06 -0.09 -0.06 -0.17 -0.2 -0.26 0 -0.26 -0.11 0.15 -0.14 -0.07 -0.08 0.01 0.05 0.48 -0.01 0.06 0.48 -0.01 0.06 -0.12 0.14 0.08 -0.14 -0.06 0 -0.26 0.06 0.51 0.03 0.25 0.11 0.12 -0.24 0.23 -0.12 0.32 -0.15 0.06 0.18 0.07 -0.02 -0.17 -0.07 0.01 0.07 0.19 0.03 0.03 -0.03 0.08 -1.08 0.12 0.04 0.06 0.27 -0.06 0.04 0.25 -0.91 -0.26 -0.02 0.08 -0.28 0.13 -0.16 0.2 0.24 -0.15 -0.03 0.22 0.07 0.01 0.14 -0.04 -0.08 0.14 -0.07 0.03 0.23 0.08 -0.12 0.02 0.04 0.06 -0.14 0.01 -0.18 0 0 -0.05 -0.22 -0.04 -0.01 At4g13780 254734_at
similar to methionyl-tRNA synthetase (Oryza sativa) 4
protein synthesis | aminoacyl-tRNA-synthetases tRNA charging pathway Methionine metabolism | Selenoamino acid metabolism | Aminoacyl-tRNA biosynthesis



0.51 1.59
At4g15560 0.513 CLA1 1-deoxy-D-xylulose 5-phosphate synthase, putative / 1-deoxyxylulose-5-phosphate synthase, putative / DXP-synthase, putative (DEF) (CLA1); essential for chloroplast development in Arabidopsis -0.04 0.12 0.19 0.11 -0.01 0.18 0.28 -0.04 0.15 0.2 -0.07 0.21 0.12 -0.31 0.21 0.05 0.1 0.05 0.13 -0.07 0.16 -0.09 -0.44 0.08 0.09 -0.13 -0.39 -0.43 -0.13 -0.39 -0.43 0.02 -0.19 -0.42 0.06 0.01 0.17 -0.26 -0.04 0.09 0.04 0.08 -0.09 0.07 0.01 0.3 0.04 0.4 0.25 0.25 -0.06 0.23 -0.06 0.24 -0.52 0.04 0.04 -0.03 -0.07 0.05 0.26 0.15 -0.97 -0.09 -0.25 0.07 -0.28 -0.23 0.08 0.07 -0.71 0.21 0.31 0.24 0.11 0.13 0.17 -0.1 -0.06 -0.05 -0.03 0 0.07 0.22 0.09 0.15 0.15 0.23 0.12 -0.24 -0.55 0.19 0.31 0.14 -0.05 0.11 -0.05 -0.06 0.21 0.33 -0.11 0.35 0.13 -0.18 -0.68 At4g15560 245281_at CLA1 1-deoxy-D-xylulose 5-phosphate synthase, putative / 1-deoxyxylulose-5-phosphate synthase, putative / DXP-synthase, putative (DEF) (CLA1); essential for chloroplast development in Arabidopsis 10 1-deoxy-D-xylulose-5-phosphate synthase activity lipid, fatty acid and isoprenoid metabolism of energy reserves (e.g. glycogen, trehalose) | photosynthesis isopentenyl diphosphate biosynthesis -- mevalonate-independent | pyridoxal 5'-phosphate biosynthesis | thiamine biosynthesis Biosynthesis of steroids Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Biosynthesis of prenyl diphosphates
IPP (isopentenyl diphosphate) and DMAPP (dimethylallyl diphosphat) biosynthesis | MEP (methylerythritol P) pathway, plastids
0.74 1.37
At4g17600 0.508 LIL3:1 lil3 protein -0.08 0.03 0.02 -0.06 -0.13 0.01 0.08 0.07 0.03 -0.01 -0.01 0.09 0.05 -0.25 0.06 -0.12 -0.11 -0.02 -0.04 0.02 -0.03 -0.13 0.01 0.06 -0.1 -0.03 0.28 0.28 -0.03 0.28 0.28 0 -0.08 -0.2 -0.03 -0.14 0.19 -0.41 0.01 -0.17 0.1 -0.32 0.17 0.02 0.21 -0.02 0.14 0.01 -0.01 -0.01 0.11 -0.17 0.25 0.18 -0.3 0.18 0.07 0.27 0.16 0.28 -0.01 0.22 -0.92 -0.1 -0.23 -0.18 0.14 -0.15 -0.15 -0.06 -1.12 -0.66 0.5 -0.32 -0.26 -0.27 0.78 -0.19 0.21 0.57 0.26 0.02 0.01 0.09 0.01 0.12 -0.01 0.11 0.02 0.12 -0.92 0.17 0.31 0.19 -0.16 0.23 -0.08 -0.26 0.11 -0.03 -0.1 0.24 -0.18 0.48 0.42 At4g17600 245354_at LIL3:1 lil3 protein 8 regulation of transcription


Photosystems | additional photosystem II components | Early light-inducible proteins


0.63 1.90
At4g38690 0.508
contains weak similarity to 1-phosphatidylinositol phosphodiesterase -0.93 0.39 0.47 0.28 -0.97 0.93 -0.22 -0.68 0.69 -0.19 0.61 -0.22 -0.44 1.03 0.93 -2.21 -0.89 0.19 -2.21 -1.21 0.97 0.56 0.81 0.39 0.39 0.39 0.39 0.39 0.39 0.39 0.39 0.33 0.23 -0.45 -0.23 -0.24 0.25 -0.12 -0.33 0.62 0.07 0.77 -0.56 0.28 0.05 0.86 0.11 0.69 0.96 0.55 -0.56 1.35 -0.49 0.5 -1.51 0.76 -0.53 -0.6 -0.28 -0.33 -0.93 -0.45 -2.12 -0.2 -3.24 0.09 -0.28 -1.12 -0.02 0.12 -1.48 0.39 0.73 0.27 0.39 0.39 -0.14 0.24 -0.75 0.43 0.22 -0.22 0 0.06 -0.4 1.06 -0.02 0.92 0.6 0.32 0.01 0.38 0.03 0.23 0.38 0.39 0.63 0.34 0.15 0.28 0.44 0.33 -0.01 0.36 -1.69 At4g38690 252950_at
contains weak similarity to 1-phosphatidylinositol phosphodiesterase 2

lipases pathway

Lipid signaling

2.43 4.59
At3g18890 0.507
similar to UV-B and ozone similarly regulated protein 1 UOS1 (Pisum sativum) -0.14 0.12 -0.04 0.08 -0.02 -0.1 -0.07 -0.02 0.03 -0.2 0 0.02 -0.18 -0.26 0.02 -0.19 0.01 -0.02 -0.18 0.09 -0.06 -0.51 0.24 -0.02 -0.12 -0.07 0.09 0.13 -0.07 0.09 0.13 -0.01 -0.05 -0.06 0.04 -0.04 0.32 -0.44 0.26 -0.09 0.18 -0.05 0.24 0.02 0.03 -0.14 0.05 0.16 -0.06 0.03 0.06 -0.12 0.11 0.17 -0.36 -0.05 -0.02 0.35 0.14 -0.13 0.09 0.27 -0.78 -0.01 -0.25 -0.02 -0.11 0.06 0.08 -0.07 -1.43 0.12 0.12 0.12 0.12 0.12 0.5 -0.3 0.59 0.24 -0.28 0.16 0.23 0.47 0.16 0.12 0.15 0.21 0.17 0.12 -1.34 0.12 0.37 0.12 0.06 0.12 0.46 0.12 -0.18 0.12 0.13 0.12 0.03 -0.06 -0.42 At3g18890 256655_at
similar to UV-B and ozone similarly regulated protein 1 UOS1 (Pisum sativum) 4



Chloroplastic protein import via envelope membrane | Tic apparatus


0.75 2.02
At4g01690 0.505 PPOX protoporphyrinogen oxidase 0.09 0.13 0.15 0.17 0.05 0.17 0.27 -0.03 0.03 0.19 -0.09 0.01 -0.15 -0.19 -0.01 -0.06 -0.02 -0.13 -0.15 -0.1 -0.28 -0.31 -0.06 -0.07 0 -0.19 0 0.05 -0.19 0 0.05 0.13 -0.09 -0.15 -0.02 0.05 0.22 -0.34 -0.12 0.25 0.05 0.18 0 0.14 -0.2 0.11 -0.03 0.28 0.05 -0.06 -0.1 0.04 0.09 -0.03 -0.27 -0.06 -0.1 0.16 0.04 -0.14 -0.16 -0.15 -0.97 0.13 -0.55 0.03 0.09 -0.27 -0.13 0.01 -0.46 0.17 0.03 0.08 0.28 0.07 0.14 -0.3 0.35 -0.03 0.07 -0.03 -0.03 0.26 0.11 0.15 0.02 0.3 0.1 0.23 -0.1 0.18 0.22 0.07 0.15 0.21 0.28 0.07 0.1 0.15 0.1 0.22 0.18 -0.41 -0.42 At4g01690 255537_at PPOX protoporphyrinogen oxidase 10 protoporphyrinogen oxidase activity | porphyrin biosynthesis secondary metabolism | biogenesis of chloroplast chlorophyll biosynthesis | biosynthesis of proto- and siroheme Porphyrin and chlorophyll metabolism Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Chlorophyll biosynthesis and breakdown
chlorophyll and phytochromobilin metabolism | chlorophyll and phyochromobilin biosynthesis
0.60 1.33
At2g35840 0.504 SPP1 sucrose-phosphatase 1 0.2 0.1 0.01 0.19 -0.12 -0.03 0.05 -0.34 0.05 0.16 -0.11 -0.03 0.08 0.66 -0.17 -0.23 -0.19 -0.38 -0.27 0.03 -0.37 -0.39 -0.51 0.01 0.3 -0.08 0.22 0.08 -0.08 0.22 0.08 -0.23 -0.12 0.01 0.03 0 -0.06 -0.44 0.15 0.38 0.24 0.45 0.12 0.68 0.15 0.32 -0.13 0.43 0.23 0.48 0.19 0.21 0.13 -0.04 -0.52 -0.34 -0.27 0.25 0.07 -0.24 0.15 -0.06 -0.75 -0.07 -0.36 0.02 -0.27 0.43 -0.02 -0.3 -0.57 0.5 0.03 0.03 0.34 0.16 0.17 -0.35 -0.44 -0.23 0.05 -0.24 -0.47 0.03 0.08 0.15 0.1 0.03 0.04 0.12 -0.21 0.07 0.25 0.11 -0.12 0.06 0.23 0.12 0.44 0.16 -0.11 0.12 -0.17 -0.26 -0.17 At2g35840 263954_at SPP1 sucrose-phosphatase 1 6
C-compound and carbohydrate metabolism | glycolysis and gluconeogenesis | photosynthesis sucrose biosynthesis
Cell Wall Carbohydrate Metabolism | sucrose metabolism


0.88 1.43
At2g03550 0.501
similar to PrMC3 (Pinus radiata) -0.2 0.14 0.15 -0.28 -0.28 0.14 -0.53 -0.26 0.34 0.14 0.43 0.25 0.04 0.18 0.4 0.16 -0.01 0.17 0.1 0.18 0.52 -0.21 -0.24 0.14 0.14 0.14 0.14 0.14 0.14 0.14 0.14 -0.28 -0.35 0.35 -0.35 -0.39 -0.49 -0.68 0.05 0.11 0.23 0.24 -0.34 -0.02 0.04 0.12 0.06 0.19 0.18 0.33 -0.14 0.13 0.49 0.25 -0.74 0.15 -0.27 0.17 0.05 -0.15 0.13 0.37 -1.62 -0.07 -0.7 0.17 -0.4 0.02 -0.39 -0.47 -0.7 0.14 0.14 0.14 0.14 0.14 0.14 -0.25 0.11 0.21 0.65 0.12 -0.45 0.01 0.2 0.25 0.27 0.03 0.08 0.1 -0.05 0.16 0.14 -0.3 -0.05 -0.13 0.11 -0.03 0.12 0.24 -0.01 0.22 0.02 0.38 -0.72 At2g03550 265699_at
similar to PrMC3 (Pinus radiata) 2






carboxylesterase 1.03 2.27
At3g49470 0.501
nascent polypeptide-associated complex (NAC) domain-containing protein -0.06 0.08 0.05 -0.08 -0.18 0.05 0.01 0.04 0.01 0.02 -0.1 -0.06 -0.23 -0.48 -0.05 -0.36 -0.31 -0.25 -0.2 0.07 -0.24 -0.37 -0.07 -0.07 -0.24 0.1 0.45 0.59 0.1 0.45 0.59 0.07 -0.14 -0.01 0.09 -0.07 0.16 -0.44 0.14 0.07 0.04 -0.1 0.03 0.03 0.13 0.11 0.04 0.15 0.04 -0.06 0.22 -0.05 0.15 0.07 -0.46 0.18 -0.12 0.22 0.18 0.14 0.13 0.17 -1.59 0.06 -0.14 -0.02 0.16 -0.33 0.07 0.08 -0.77 -0.06 0.05 -0.06 0.13 0.03 -0.05 0.06 0.67 0.66 0.27 -0.14 0.18 0.13 0.12 0.04 0.18 -0.02 0.07 0.08 -0.68 0.3 0.22 0.15 -0.38 0.03 0.03 -0.12 0.13 0.05 -0.27 0.05 -0.26 0.13 0.39 At3g49470 252277_at
nascent polypeptide-associated complex (NAC) domain-containing protein 2
protein synthesis | translational control
Transcription | Basal transcription factors



0.87 2.26




























































































































page created by Juergen Ehlting 05/24/06