| Hormones etc. Data Set |
save / view heatmap as: |
OpenOffice Table |
annotation details for co-expressed genes can be found to the right of the heatmap |
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MS Excel Table |
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save / view all data as: |
Tab delimited Table |
For further information on the experiments please go to the Genevestigator database using the experiment-ID given in brackets. |
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| shown are a maximum of 50 genes with r>0.5 (If more co-expressed genes with r>0.5 exist, they can be saved as Tab delimited data only) |
magnitude of change [log2(treatment/control)] |
0 |
0.3 |
0.6 |
0.9 |
1.2 |
1.5 |
1.8 |
2.1 |
2.4 |
2.7 |
>2.99 |
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| greater than zero |
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| Locus |
r-value |
Name |
Description |
ethylene, 3h, petiole (13) |
mock, 30min, seedling (110) |
IAA, 30min, seedling (110) |
IAA, 1h, seedling (110) |
IAA, 3h, seedling (110) |
zeatin, 30min, seedling (110) |
zeatin, 1h, seedling (110) |
zeatin, 3h, seedling (110) |
GA3, 30min, seedling (110) |
GA3, 1h, seedling (110) |
GA3, 3h, seedling (110) |
ABA, 30min, seedling (110) |
ABA, 1h, seedling (110) |
ABA, 3h, seedling (110) |
MJ, 30min, seedling (110) |
MJ, 1h, seedling (110) |
MJ, 3h, seedling (110) |
ACC, 30min, seedling (110) |
ACC, 1h, seedling (110) |
ACC, 3h, seedling (110) |
BL, 30min, seedling (110) |
BL, 1h, seedling (110) |
BL, 3h, seedling (110) |
ABA, 3 uM, imbided seed (116) |
ABA, 30 uM, imbided seed (116) |
GA, 3h, imbibed seed (119) |
GA, 6h, imbibed seed (119) |
GA, 9h, imbibed seed (119) |
GA, 3h, imbibed seed (134) |
GA, 6h, imbibed seed (134) |
GA, 9h, imbibed seed (134) |
GA, 30min, whole plant (99) |
GA, 60min, whole plant (99) |
GA, 3h, whole plant (99) |
IAA, 0.1uM, 1h, seedling (144) |
IAA, 0.1uM, 3h, seedling (144) |
IAA, 1uM, 1h, seedling (144) |
IAA, 1uM, 3h, seedling (144) |
ppi, 3h, seedling (113) |
ppi, 12h, seedling (113) |
uni, 3h, seedling (113) |
uni, 12h, seedling (113) |
brz220, 3h, seedling (113) |
brz220, 12h, seedling (113) |
brz91, 3h, seedling (113) |
brz91, 12h, seedling (113) |
pac, 3h, seedling (113) |
pac, 12h, seedling (113) |
px, 3h, seedling (113) |
px, 12h, seedling (113) |
pno8, 3h, seedling (113) |
pno8, 12h, seedling (113) |
ibup, 3h, seedling (113) |
B9, 3h, seedling (113) |
AgNO3, 3h, seedling (113) |
AVG, 3h, seedling (113) |
Sal, 3h, seedling (113) |
MG132, 3h, seedling (113) |
246T, 3h, seedling (113) |
PCIB, 3h, seedling (113) |
TIBA, 3h, seedling (113) |
NPA, 3h, seedling (113) |
CHX, 3h, seedling (113) |
Colm, 3h, seedling (113) |
ColPNO8, 3h, seedling (113) |
ColBrz, 3h, seedling (113) |
glucose, 8h, seedling (14) |
sucrose, 8h, seedling (15) |
deoxyglucose, 8h_seedling (14) |
methylglucose, 8h, seedling (14) |
K depleted, whole rosette (97) |
K depleted, root (97) |
Sulfate depleted, 2h, root (112) |
Sulfate depleted, 4h, root (112) |
Sulfate depleted, 8h, root (112) |
Sulfate depleted, 12h, root (112) |
Sulfate depleted, 24h, root (112) |
mannitol, 8h, seedling (14) |
CO2, 1000ppm, guard cell enriched (11) |
CO2, 1000ppm, mature leaf (11) |
CO2, high light, whole rosette (95) |
CO2, medium light, whole rosette (95) |
CO2, low light, whole rosette (95) |
CO2, 2h, juvenile leaf (151) |
CO2, 4h, juvenile leaf (151) |
CO2, 6h, juvenile leaf (151) |
CO2, 12h, juvenile leaf (151) |
CO2, 24h, juvenile leaf (151) |
CO2, 48h, juvenile leaf (151) |
dark, 45min, seedling (109) |
dark, 4h, seedling (109) |
far red, 45min, seedling (109) |
far red, 4h, seedling (109) |
red pulse1, seedling (109) |
red pulse2, seedling (109) |
red, 45min, seedling (109) |
red, 4h, seedling (109) |
blue, 45min, seedling (109) |
blue, 4h, seedling (109) |
UV-A pulse1, seedling (109) |
UV-A pulse2, seedling (109) |
UV-AB pulse1, seedling (109) |
UV-AB pulse2, seedling (109) |
UV-A, 18h, mature leaf (72) |
UV-B, 18h, mature leaf (72) |
Locus |
Probeset |
Name |
Description |
Annotation score |
GO.keywords |
FunCat keywords |
AraCyc annotations |
KEGG annotations |
BioPath annotations |
AcylLipid category |
Literature annotations |
Gene family |
90% quantile of DE |
max. DE |
| At5g25120 |
1.000 |
CYP71B11 |
cytochrome P450 family protein |
-0.73 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
1.2 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
-0.52 |
0 |
0 |
0 |
0 |
0 |
0 |
-0.47 |
-1.46 |
-0.98 |
-0.17 |
-0.17 |
-0.21 |
-0.57 |
0.7 |
0.08 |
0.69 |
0 |
0.37 |
0.18 |
0.33 |
0 |
0.48 |
0.1 |
0.51 |
0.21 |
0.33 |
0 |
0.33 |
0.33 |
0.33 |
0.2 |
0.25 |
0.33 |
0.55 |
0.33 |
0.56 |
0.63 |
0.33 |
0.33 |
0.33 |
0.33 |
0 |
-0.09 |
1.07 |
-0.47 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0.95 |
0 |
-0.39 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
-0.45 |
-2.29 |
0.54 |
0.5 |
0.46 |
-2.29 |
0.66 |
-2.29 |
0.38 |
-0.44 |
1.5 |
-2.29 |
1.62 |
-1.49 |
0.21 |
-0.39 |
At5g25120 |
246947_at |
CYP71B11 |
cytochrome P450 family protein |
1 |
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cytochrome P450 family |
2.06 |
3.92 |
| At1g23740 |
0.674 |
|
oxidoreductase, zinc-binding dehydrogenase family protein, |
-0.05 |
0.14 |
0.19 |
-0.2 |
-0.2 |
-0.21 |
-0.12 |
-0.06 |
-0.07 |
-0.16 |
-0.09 |
-0.06 |
0.16 |
0.44 |
-0.15 |
-0.33 |
-0.27 |
-0.37 |
-0.14 |
0.04 |
-0.16 |
-0.24 |
-0.08 |
-0.04 |
-0.44 |
0.16 |
-0.11 |
0.04 |
0.16 |
-0.11 |
0.04 |
0.09 |
-0.59 |
-0.92 |
-0.14 |
-0.13 |
0 |
0.02 |
0.63 |
-0.06 |
0.65 |
-0.07 |
0.35 |
0.12 |
0.65 |
0.22 |
0.32 |
-0.03 |
0.46 |
0.23 |
0.6 |
0.24 |
0.33 |
0.2 |
0.01 |
0.34 |
0.17 |
0.68 |
0.38 |
0.56 |
0.34 |
0.54 |
-0.69 |
0.25 |
0.13 |
0.03 |
0.11 |
-0.24 |
0.16 |
0.22 |
-0.23 |
0.14 |
0.03 |
0.03 |
0.14 |
0.14 |
-0.06 |
0.17 |
-0.56 |
-1.35 |
-0.22 |
-0.14 |
-0.17 |
0.01 |
-0.06 |
0.24 |
0.3 |
0.1 |
0.02 |
-1.68 |
-1.91 |
0.04 |
0.95 |
-0.03 |
-1.27 |
0.15 |
-0.13 |
0.04 |
0.65 |
0.6 |
-1.32 |
0.79 |
-0.89 |
0.6 |
1.01 |
At1g23740 |
265182_at |
|
oxidoreductase, zinc-binding dehydrogenase family protein, |
2 |
|
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threonine degradation |
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1.56 |
2.91 |
| At2g21330 |
0.665 |
|
fructose-bisphosphate aldolase, putative, strong similarity to plastidic fructose-bisphosphate aldolase from Nicotiana paniculata and Oryza sativa |
-0.17 |
0.18 |
0.17 |
0.06 |
-0.09 |
0 |
0.12 |
0.04 |
0.07 |
0.01 |
-0.2 |
-0.03 |
0.09 |
-0.25 |
0.03 |
-0.04 |
-0.31 |
0.01 |
0.05 |
-0.11 |
-0.04 |
-0.03 |
0.17 |
0.37 |
0.22 |
0.12 |
0.13 |
-0.31 |
0.12 |
0.13 |
-0.31 |
0.22 |
-0.22 |
-0.41 |
0.14 |
-0.03 |
0.23 |
-0.62 |
0.28 |
0.2 |
0.23 |
0.5 |
0.26 |
0.18 |
0.41 |
0.2 |
0.18 |
0.28 |
0.4 |
0.27 |
0.36 |
0.37 |
0.45 |
0.47 |
-0.15 |
0.16 |
-0.14 |
0.37 |
0.18 |
0.27 |
0.08 |
0.22 |
-1.14 |
-0.17 |
-0.24 |
-0.11 |
-0.09 |
0.14 |
0 |
0.23 |
-0.5 |
0.18 |
0.18 |
0.18 |
0.18 |
0.18 |
0.18 |
-0.09 |
-0.31 |
0.06 |
0.32 |
-0.11 |
0.23 |
0.3 |
0.17 |
0.34 |
0.34 |
0.14 |
-0.01 |
-0.95 |
-3.28 |
0.36 |
0.7 |
0.28 |
-2.2 |
0.69 |
0.07 |
-0.01 |
0.4 |
0.36 |
-2.2 |
0.84 |
-2.23 |
0.51 |
0.46 |
At2g21330 |
263761_at |
|
fructose-bisphosphate aldolase, putative, strong similarity to plastidic fructose-bisphosphate aldolase from Nicotiana paniculata and Oryza sativa |
4 |
pentose-phosphate shunt |
C-compound and carbohydrate metabolism | glycolysis and gluconeogenesis | photosynthesis |
Calvin cycle | mannitol degradation | sorbitol fermentation | sorbitol degradation | fructose degradation (anaerobic) | acetate fermentation | glycolysis I | glycolysis IV |
Glycolysis / Gluconeogenesis | Pentose phosphate pathway | Fructose and mannose metabolism | Carbon fixation |
Intermediary Carbon Metabolism | Gluconeogenesis from lipids in seeds |
|
|
|
1.36 |
4.12 |
| At5g24120 |
0.649 |
SIGE |
RNA polymerase sigma subunit SigE (sigE) / sigma-like factor (SIG5) |
-0.08 |
0.1 |
0.19 |
-0.25 |
-0.11 |
-0.17 |
-0.14 |
-0.59 |
-0.18 |
0.03 |
-0.19 |
0.49 |
1.08 |
1.97 |
-0.21 |
-0.09 |
-0.59 |
0.06 |
0.27 |
-0.08 |
-0.27 |
0.11 |
-0.01 |
0.15 |
-0.92 |
-0.33 |
-0.06 |
-0.01 |
-0.33 |
-0.06 |
-0.01 |
-0.2 |
-0.73 |
-0.59 |
-0.18 |
0.24 |
-0.66 |
-1.12 |
0.2 |
0.31 |
0.13 |
0.49 |
0.51 |
0.43 |
0.59 |
0.73 |
0.22 |
0.45 |
0.36 |
0.09 |
0.44 |
0.76 |
-0.09 |
0.46 |
-0.18 |
0.34 |
0.05 |
-0.28 |
0.15 |
0.34 |
0.7 |
0.14 |
0.17 |
0.71 |
1.19 |
0.82 |
-0.11 |
0 |
0.67 |
0.57 |
0.2 |
-0.28 |
0.31 |
0.12 |
0.43 |
0.48 |
0.32 |
0.56 |
-1.39 |
-1.8 |
-0.38 |
-0.64 |
-0.36 |
0.17 |
0.52 |
-0.21 |
0.22 |
-0.06 |
0.23 |
-2.58 |
-3.3 |
-0.3 |
1.31 |
-0.33 |
-3.2 |
-0.39 |
-1.11 |
0.07 |
0.55 |
1.02 |
-1.89 |
0.93 |
0.48 |
0.43 |
1.99 |
At5g24120 |
249769_at |
SIGE |
RNA polymerase sigma subunit SigE (sigE) / sigma-like factor (SIG5) |
6 |
transcription initiation |
|
|
Transcription | RNA polymerase |
Transcription (chloroplast) |
|
|
|
2.35 |
5.29 |
| At1g78440 |
0.648 |
GA2OX1 |
gibberellin 2-oxidase / GA2-oxidase (GA2OX1) |
-0.05 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
-0.3 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.15 |
0.32 |
1.69 |
-0.03 |
0.03 |
0.12 |
0.12 |
0.12 |
0.12 |
-1.23 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
-2.74 |
-2.71 |
0.69 |
1.87 |
0.19 |
-2.71 |
0.24 |
-0.47 |
0.18 |
1.03 |
0.96 |
-2.71 |
0.75 |
-2.71 |
-0.35 |
-1.55 |
At1g78440 |
260773_at |
GA2OX1 |
gibberellin 2-oxidase / GA2-oxidase (GA2OX1) |
10 |
gibberellic acid catabolism | gibberellin 2-beta-dioxygenase activity |
|
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Diterpenoid biosynthesis |
|
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Gibberellin metabolism | giberelin catabolism |
|
2.10 |
4.61 |
| At4g35250 |
0.639 |
|
low similarity to vestitone reductase (Medicago sativa subsp. sativa) |
-0.09 |
0.15 |
0.11 |
0.14 |
-0.01 |
-0.04 |
0.07 |
0.11 |
-0.05 |
0.04 |
-0.07 |
-0.09 |
0.02 |
0.25 |
-0.04 |
-0.1 |
-0.02 |
-0.11 |
-0.15 |
0.19 |
-0.14 |
-0.21 |
0.1 |
0.09 |
-0.46 |
-0.12 |
-0.74 |
0.14 |
-0.12 |
-0.74 |
0.14 |
-0.16 |
-0.35 |
-0.82 |
-0.07 |
-0.05 |
0.27 |
-0.34 |
0.26 |
0.18 |
0.33 |
0.41 |
0.24 |
0.31 |
0.4 |
0.44 |
0.2 |
0.26 |
0.53 |
0.03 |
0.23 |
0.33 |
0.15 |
0.41 |
-0.09 |
0.28 |
-0.12 |
0.15 |
0.07 |
0.45 |
0.24 |
0.18 |
-0.96 |
0.04 |
-0.07 |
0.18 |
0.09 |
-0.45 |
0.3 |
0.34 |
-1 |
0.03 |
0.16 |
0.2 |
0.27 |
0.6 |
-0.04 |
0.35 |
0.14 |
-0.03 |
-0.06 |
-0.42 |
-0.36 |
0.18 |
0.11 |
0.19 |
0.23 |
0.11 |
0.1 |
-1.37 |
-2.18 |
0.35 |
0.85 |
0.21 |
-1.29 |
0.1 |
-0.33 |
-0.12 |
0.47 |
0.46 |
-1.51 |
0.59 |
-0.38 |
0.27 |
1.03 |
At4g35250 |
253197_at |
|
low similarity to vestitone reductase (Medicago sativa subsp. sativa) |
2 |
|
|
lysine biosynthesis I | colanic acid building blocks biosynthesis | galactose degradation I | UDP-glucose conversion | lactose degradation IV |
|
|
|
|
|
1.40 |
3.20 |
| At1g44575 |
0.626 |
NPQ4 |
Encoding PSII-S (CP22), a ubiquitous pigment-binding protein associated with photosystem II (PSII) of higher plants. Involved in nonphotochemical quenching rather than in photosynthesis. |
-0.14 |
0.05 |
0.23 |
0.27 |
0 |
0.26 |
0.2 |
-0.27 |
0.05 |
0.1 |
-0.32 |
-0.08 |
-0.13 |
-0.3 |
-0.21 |
-0.19 |
-0.1 |
-0.26 |
-0.22 |
-0.43 |
-0.55 |
-0.26 |
-0.32 |
-0.11 |
-0.74 |
-0.21 |
-0.17 |
-0.17 |
-0.21 |
-0.17 |
-0.17 |
0.02 |
-0.1 |
-0.01 |
-0.06 |
0.04 |
0.1 |
-0.43 |
0.18 |
-0.06 |
0.26 |
0.28 |
0.18 |
-0.04 |
0.13 |
-0.16 |
0.13 |
0.15 |
0.61 |
0.07 |
0.37 |
-0.1 |
0.52 |
0.47 |
0.11 |
0.12 |
0.28 |
0.22 |
0.1 |
0.24 |
0.16 |
0.06 |
-0.08 |
0.46 |
0.17 |
0.61 |
0.12 |
-0.21 |
-0.05 |
0.09 |
-0.09 |
0.05 |
-0.22 |
0.21 |
0.23 |
0.4 |
-0.12 |
-0.01 |
0.33 |
0.48 |
-0.07 |
0.01 |
0.12 |
0.33 |
0.14 |
0.11 |
0.06 |
-0.03 |
-0.02 |
-0.26 |
-2.17 |
0.23 |
0.6 |
0.06 |
-0.97 |
0.03 |
-0.15 |
0.11 |
0.31 |
0.28 |
-1.01 |
0.78 |
-0.66 |
0.16 |
0.35 |
At1g44575 |
245213_at |
NPQ4 |
Encoding PSII-S (CP22), a ubiquitous pigment-binding protein associated with photosystem II (PSII) of higher plants. Involved in nonphotochemical quenching rather than in photosynthesis. |
8 |
nonphotochemical quenching | PSII associated light-harvesting complex II | chlorophyll binding |
|
|
Photosynthesis |
Photosystems | Photosystem II |
|
|
|
1.00 |
2.95 |
| At4g36830 |
0.623 |
|
GNS1/SUR4 membrane family protein, weak similarity to long chain polyunsaturated fatty acid elongation enzyme (Isochrysis galbana) |
0.03 |
0.03 |
0.03 |
0.03 |
0.03 |
0.03 |
0.14 |
0.45 |
0.03 |
0.03 |
0.26 |
0.03 |
0.06 |
0.03 |
0.03 |
1.04 |
0.44 |
0.03 |
0.03 |
0 |
0.03 |
0.03 |
0.03 |
0.03 |
0.03 |
0.03 |
0.03 |
0.03 |
0.03 |
0.03 |
0.03 |
0.03 |
0.03 |
0.03 |
0.03 |
0.03 |
0.03 |
-0.39 |
0.05 |
-0.32 |
-0.11 |
0.01 |
0.08 |
-0.08 |
0.03 |
-0.28 |
0.11 |
-0.07 |
0.03 |
-0.28 |
0.03 |
-0.05 |
0.03 |
0.03 |
0.03 |
0.57 |
0.03 |
0.03 |
-0.01 |
0.03 |
0.03 |
0.03 |
0.81 |
0.03 |
0.03 |
0.03 |
0.03 |
0.03 |
0.03 |
0.03 |
0.03 |
0.03 |
0.06 |
-0.22 |
-0.35 |
0.17 |
-0.02 |
0.03 |
-0.69 |
0.03 |
0.03 |
0.03 |
0.03 |
0.03 |
0.03 |
0.03 |
0.03 |
0.03 |
0.03 |
0.03 |
-2.31 |
0.03 |
0.23 |
0.03 |
-1 |
0.03 |
-0.28 |
0.03 |
0 |
1.09 |
-1.06 |
0.64 |
-0.39 |
0.03 |
0.03 |
At4g36830 |
246235_at |
|
GNS1/SUR4 membrane family protein, weak similarity to long chain polyunsaturated fatty acid elongation enzyme (Isochrysis galbana) |
2 |
|
|
|
|
|
Fatty acid elongation and wax and cutin metabolism |
|
|
0.83 |
3.42 |
| At1g09340 |
0.620 |
|
expressed protein |
-0.06 |
0.16 |
0.13 |
-0.02 |
0.03 |
-0.04 |
0.06 |
0.06 |
0.05 |
-0.12 |
-0.15 |
-0.03 |
-0.08 |
-0.11 |
-0.14 |
-0.28 |
-0.09 |
-0.07 |
-0.11 |
0.11 |
-0.18 |
-0.23 |
0.14 |
0.09 |
-0.44 |
0.25 |
0.56 |
0.43 |
0.25 |
0.56 |
0.43 |
0.01 |
-0.11 |
-0.25 |
0.02 |
0.02 |
0.2 |
-0.35 |
0.16 |
-0.06 |
0.07 |
0.25 |
-0.04 |
0.05 |
-0.01 |
-0.01 |
-0.08 |
0.17 |
0.39 |
0.16 |
0.1 |
0.07 |
0.43 |
0.38 |
-0.01 |
-0.11 |
-0.06 |
0.08 |
-0.07 |
0.16 |
0.12 |
-0.03 |
-0.64 |
-0.02 |
-0.12 |
0.07 |
0.13 |
-0.7 |
0.09 |
0.24 |
-0.86 |
0.16 |
0.71 |
-0.26 |
0.16 |
0.33 |
0.16 |
0.06 |
0.36 |
0.13 |
0.27 |
0.03 |
0.34 |
0.34 |
0.19 |
0.21 |
0.1 |
0.18 |
0.18 |
0.51 |
-3.13 |
0.42 |
0.47 |
0.21 |
-1.41 |
0.25 |
-0.28 |
-0.32 |
0.2 |
0.18 |
-1.4 |
0.78 |
-1.19 |
0.2 |
-0.15 |
At1g09340 |
263676_at |
|
expressed protein |
1 |
|
|
colanic acid building blocks biosynthesis | dTDP-rhamnose biosynthesis | galactose degradation I | UDP-glucose conversion | lactose degradation IV |
|
|
|
|
|
1.15 |
3.91 |
| At4g37930 |
0.618 |
SHM1 |
mitochondrial serine hydroxymethyltransferase, functions in the photorespiratory pathway, catalyzes the conversion of serine and tetrahydrofolate to glycine and 5,10-methylene tetrahydrofolate |
-0.08 |
0.08 |
0.17 |
-0.01 |
-0.03 |
0.07 |
-0.04 |
-0.03 |
0.05 |
-0.15 |
-0.11 |
0 |
-0.11 |
-0.15 |
-0.03 |
-0.28 |
-0.08 |
-0.01 |
-0.25 |
-0.07 |
-0.1 |
-0.25 |
-0.09 |
0.13 |
-0.21 |
0.13 |
0.08 |
0.15 |
0.13 |
0.08 |
0.15 |
0.12 |
0.1 |
0.01 |
0.08 |
0.05 |
-0.01 |
-0.47 |
0.2 |
-0.13 |
0.17 |
0.08 |
0.12 |
0 |
0.22 |
-0.07 |
0.09 |
0.12 |
0.51 |
0.12 |
0.13 |
0.09 |
0.37 |
0.38 |
0.11 |
0.1 |
0.19 |
0.36 |
0.1 |
0.31 |
0.17 |
0.14 |
-0.22 |
0.22 |
0.09 |
0.32 |
-0.03 |
-0.57 |
0.04 |
0.12 |
-1.08 |
-0.25 |
0.08 |
0.02 |
0.28 |
-0.05 |
0.02 |
-0.02 |
0.02 |
0.11 |
0.08 |
-0.06 |
0.17 |
0.16 |
0.09 |
0.15 |
0.08 |
0.12 |
0.02 |
0.04 |
-2.48 |
0.25 |
0.38 |
0.26 |
-0.82 |
0.32 |
-0.18 |
0.02 |
0.19 |
0.21 |
-0.73 |
0.53 |
-0.77 |
0.12 |
-0.15 |
At4g37930 |
253009_at |
SHM1 |
mitochondrial serine hydroxymethyltransferase, functions in the photorespiratory pathway, catalyzes the conversion of serine and tetrahydrofolate to glycine and 5,10-methylene tetrahydrofolate |
6 |
glycine decarboxylation via glycine cleavage system | glycine hydroxymethyltransferase activity |
amino acid metabolism |
superpathway of serine and glycine biosynthesis II | glycine biosynthesis I | formylTHF biosynthesis | serine-isocitrate lyase pathway | formaldehyde assimilation I (serine pathway) | photorespiration |
Methane metabolism | Glycine, serine and threonine metabolism | Lysine degradation | Cyanoamino acid metabolism | One carbon pool by folate |
Biosynthesis of Amino Acids and Derivatives | Glutathione metabolism |
|
|
|
0.91 |
3.01 |
| At5g58330 |
0.610 |
|
strong similiarity to chloroplast NADP-dependent malate dehydrogenase (Medicago sativa, Pisum sativum, Mesembryanthemum crystallinum, and other) |
-0.21 |
0.1 |
0.04 |
0.14 |
-0.1 |
0.14 |
-0.01 |
-0.02 |
0.04 |
0.07 |
-0.1 |
0.02 |
-0.05 |
0.3 |
-0.03 |
-0.14 |
-0.11 |
-0.25 |
-0.17 |
-0.08 |
-0.16 |
-0.32 |
-0.03 |
0.03 |
-0.05 |
0.28 |
0.03 |
0.35 |
0.28 |
0.03 |
0.35 |
0.08 |
-0.07 |
-0.28 |
-0.02 |
-0.1 |
0.05 |
-0.53 |
0.23 |
0.17 |
0.16 |
0.18 |
0.24 |
0.08 |
0.13 |
0.09 |
-0.02 |
0.28 |
0 |
0.35 |
0.07 |
0.03 |
0.24 |
0.37 |
0.13 |
0.04 |
0.11 |
0.3 |
-0.03 |
0.02 |
0.19 |
0.04 |
-0.69 |
-0.09 |
-0.27 |
-0.02 |
-0.2 |
-0.12 |
0.04 |
0.11 |
-0.28 |
0.1 |
0.02 |
0.35 |
0.31 |
-0.35 |
0.15 |
-0.16 |
0.03 |
-0.01 |
-0.04 |
-0.03 |
-0.11 |
0.35 |
0.04 |
0.04 |
0.25 |
0.04 |
0.22 |
0.41 |
-1.76 |
0.23 |
0.21 |
0.15 |
-0.72 |
0.04 |
-0.22 |
-0.17 |
0.07 |
0.13 |
-0.88 |
0.44 |
-0.56 |
-0.04 |
0.07 |
At5g58330 |
247813_at |
|
strong similiarity to chloroplast NADP-dependent malate dehydrogenase (Medicago sativa, Pisum sativum, Mesembryanthemum crystallinum, and other) |
6 |
|
C-compound and carbohydrate metabolism | tricarboxylic-acid pathway (citrate cycle, Krebs cycle, TCA cycle) |
gluconeogenesis | aspartate degradation II | phenylalanine degradation I | serine-isocitrate lyase pathway | formaldehyde assimilation I (serine pathway) | mixed acid fermentation | acetyl-CoA assimilation | glyoxylate cycle | TCA cycle variation VII | TCA cycle variation VIII | TCA cycle variation II | TCA cycle variation IV | TCA cycle -- aerobic respiration |
Pyruvate metabolism | Carbon fixation |
Intermediary Carbon Metabolism |
|
|
|
0.85 |
2.21 |
| At3g55800 |
0.607 |
|
Encodes the chloroplast enzyme sedoheptulose-1,7-bisphosphatase (SBPase), involved in the carbon reduction of the Calvin cycle. Increase in SBPase activity in transgenic lines accumulate up to 50% more sucrose and starch than wild-type. |
-0.21 |
0.09 |
0.14 |
0.02 |
-0.1 |
-0.01 |
0.15 |
0 |
0.03 |
-0.02 |
-0.14 |
0 |
-0.04 |
-0.14 |
-0.05 |
-0.23 |
-0.3 |
0.02 |
-0.2 |
-0.09 |
-0.13 |
-0.16 |
-0.06 |
-0.07 |
-0.53 |
0.07 |
0.07 |
-0.06 |
0.07 |
0.07 |
-0.06 |
-0.01 |
-0.2 |
-0.18 |
0.03 |
-0.08 |
0.12 |
-0.43 |
0.12 |
0.04 |
0.12 |
0.25 |
0.12 |
0.04 |
0.12 |
-0.06 |
0.04 |
0.16 |
0.36 |
0.02 |
0.14 |
0.04 |
0.44 |
0.4 |
0.02 |
0.01 |
0.07 |
0.22 |
0.17 |
0.31 |
0.19 |
0.02 |
-0.4 |
-0.21 |
-0.24 |
-0.15 |
-0.02 |
-0.74 |
0.05 |
0.15 |
-0.83 |
0.06 |
0.09 |
0.39 |
0.09 |
0.09 |
0.23 |
-0.02 |
0.17 |
0.05 |
0.17 |
-0.11 |
0.09 |
0.28 |
0.02 |
0.11 |
0.03 |
0.07 |
0.04 |
0.25 |
-1.12 |
0.39 |
0.67 |
0.48 |
-0.75 |
0.2 |
-0.11 |
0.08 |
0.36 |
0.35 |
-0.6 |
0.82 |
-0.74 |
-0.02 |
-0.38 |
At3g55800 |
251762_at |
|
Encodes the chloroplast enzyme sedoheptulose-1,7-bisphosphatase (SBPase), involved in the carbon reduction of the Calvin cycle. Increase in SBPase activity in transgenic lines accumulate up to 50% more sucrose and starch than wild-type. |
9 |
carbohydrate biosynthesis | sucrose biosynthesis | starch biosynthesis |
C-compound and carbohydrate metabolism | glycolysis and gluconeogenesis | photosynthesis | biogenesis of chloroplast |
|
Carbon fixation |
|
|
|
|
0.98 |
1.95 |
| At2g21940 |
0.600 |
|
shikimate kinase, putative, similar to shikimate kinase from Lycopersicon esculentum |
0.01 |
0.01 |
-0.02 |
0.01 |
0.01 |
0.1 |
-0.01 |
0.01 |
0.01 |
0.18 |
0.01 |
0.01 |
0.01 |
0.09 |
0.01 |
0.09 |
0.19 |
0.01 |
0.01 |
0.01 |
0.01 |
0.01 |
0.01 |
0.02 |
0.44 |
-0.15 |
-0.22 |
-0.32 |
-0.15 |
-0.22 |
-0.32 |
0.01 |
0.01 |
0.01 |
-0.3 |
-0.33 |
-0.3 |
-0.65 |
-0.03 |
0.01 |
0.01 |
0.2 |
0.01 |
0.22 |
0.01 |
0.01 |
0.01 |
0.01 |
0.01 |
0.11 |
0.01 |
0.01 |
0.01 |
0.01 |
0.01 |
0.01 |
0.01 |
0.01 |
0.01 |
0.01 |
0.01 |
0.01 |
-0.09 |
0.14 |
0.01 |
0.13 |
0.01 |
0.01 |
0.01 |
0.01 |
0.57 |
0.5 |
0.1 |
0.05 |
-0.08 |
-0.01 |
0.08 |
0.01 |
0.01 |
-0.53 |
0.01 |
0.01 |
0.01 |
0.01 |
0.01 |
0.01 |
0.01 |
0.01 |
0.01 |
0.12 |
-0.54 |
0.18 |
0.28 |
0.44 |
-0.59 |
0.83 |
-1.02 |
-0.41 |
0.27 |
0.55 |
-0.46 |
0.84 |
-0.33 |
0.01 |
0.01 |
At2g21940 |
263897_at |
|
shikimate kinase, putative, similar to shikimate kinase from Lycopersicon esculentum |
6 |
|
|
chorismate biosynthesis |
Phenylalanine, tyrosine and tryptophan biosynthesis |
Phenylpropanoid Metabolism | Aromatic amino acid (Phe, Tyr, Trp) metabolism |
|
Shikimate pathway | chorismate biosynthesis |
|
0.90 |
1.86 |
| At4g27820 |
0.596 |
|
glycosyl hydrolase family 1 protein; similar to hydroxyisourate hydrolase (Glycine max) |
-0.2 |
0.02 |
0.48 |
0.06 |
-0.68 |
0.2 |
0.51 |
-0.03 |
0.28 |
-0.2 |
-0.5 |
-0.14 |
-0.01 |
-0.16 |
-0.38 |
-0.27 |
-0.65 |
0.41 |
0.31 |
-0.17 |
0.46 |
0.52 |
-0.5 |
0.04 |
-0.48 |
-0.21 |
0.11 |
0.56 |
-0.21 |
0.11 |
0.56 |
-0.08 |
0.12 |
0.34 |
-0.56 |
-0.47 |
-0.19 |
-0.73 |
0.55 |
-0.65 |
0.08 |
-0.32 |
0.51 |
-0.03 |
1.22 |
0.22 |
0.47 |
-0.72 |
0.49 |
0.23 |
0.37 |
-0.24 |
0.67 |
0.2 |
-0.13 |
0.53 |
-0.01 |
0.73 |
0.36 |
0.64 |
0.12 |
0.03 |
0.09 |
0.45 |
0.39 |
0.4 |
-0.4 |
0.02 |
0.26 |
-0.11 |
-0.51 |
0.53 |
0.11 |
-0.03 |
0.35 |
0.34 |
-0.06 |
-0.01 |
-1.03 |
-0.65 |
-0.56 |
-0.04 |
-0.28 |
-0.15 |
-0.16 |
-0.1 |
-0.05 |
0 |
-0.02 |
0.02 |
-1.64 |
0.1 |
0.4 |
0.3 |
-1.24 |
0.48 |
-0.82 |
0 |
0.24 |
0.31 |
-1.93 |
0.82 |
-1.25 |
0.36 |
1.46 |
At4g27820 |
253835_at |
|
glycosyl hydrolase family 1 protein; similar to hydroxyisourate hydrolase (Glycine max) |
1 |
|
C-compound and carbohydrate metabolism |
|
|
|
|
|
Glycoside Hydrolase, Family 1 |
1.43 |
3.39 |
| At1g45474 |
0.595 |
LHCA5 |
chlorophyll A-B binding protein, putative |
-0.08 |
0.12 |
0.2 |
0.1 |
-0.32 |
-0.03 |
0.08 |
-0.12 |
-0.13 |
-0.06 |
-0.21 |
-0.07 |
-0.04 |
0.43 |
-0.15 |
-0.35 |
-0.06 |
-0.19 |
-0.18 |
-0.07 |
-0.13 |
-0.23 |
-0.04 |
0.01 |
-0.25 |
-0.01 |
0.04 |
-0.24 |
-0.01 |
0.04 |
-0.24 |
0.15 |
-0.04 |
-0.31 |
0.09 |
0.04 |
0.24 |
-0.5 |
0.32 |
0.36 |
0.18 |
0.15 |
-0.16 |
0.21 |
-0.02 |
0.49 |
0 |
0.13 |
0.56 |
-0.24 |
0.28 |
0.44 |
0.06 |
-0.06 |
-0.68 |
-0.08 |
-0.57 |
0.18 |
0.28 |
0.42 |
0.39 |
0.06 |
-0.63 |
0.15 |
-0.14 |
0.04 |
-0.41 |
-0.48 |
0.26 |
-0.09 |
-0.65 |
0.12 |
0.12 |
0.06 |
0.32 |
0.4 |
0.41 |
-0.17 |
-0.08 |
0.43 |
0.34 |
-0.17 |
0.14 |
0.22 |
0.2 |
0.15 |
0.18 |
0.02 |
0.06 |
0.12 |
-2.18 |
0.45 |
0.56 |
0.12 |
-1.62 |
0.12 |
-0.15 |
0.12 |
0.24 |
0.12 |
-0.73 |
1.33 |
-0.37 |
0.38 |
0.51 |
At1g45474 |
245806_at |
LHCA5 |
chlorophyll A-B binding protein, putative |
8 |
|
|
|
|
Photosystems | Chlorophyll a/b binding proteins | light harvesting complex |
|
|
|
1.07 |
3.50 |
| At5g13630 |
0.593 |
GUN5 |
Encodes magnesium chelatase involved in plastid-to-nucleus signal transduction. |
-0.09 |
0.2 |
0.17 |
0.34 |
0.14 |
0.2 |
0.2 |
0.17 |
0.22 |
0.16 |
0.04 |
0.22 |
0.24 |
0.26 |
0.16 |
0 |
0.1 |
0.16 |
0 |
-0.02 |
0.1 |
-0.06 |
0.21 |
-0.7 |
-1.59 |
-0.13 |
-0.31 |
-0.44 |
-0.13 |
-0.31 |
-0.44 |
0.06 |
-0.13 |
-0.43 |
0.17 |
0.21 |
0.4 |
-0.24 |
0.11 |
0.18 |
0.18 |
0.41 |
0.16 |
0.09 |
0.19 |
0.11 |
0.12 |
0.3 |
0.49 |
0.16 |
0.17 |
0.28 |
0.28 |
0.47 |
-0.1 |
0.16 |
0.11 |
0.14 |
0.11 |
0.24 |
0.21 |
0.19 |
-0.74 |
0.27 |
0.1 |
0.4 |
-0.13 |
-0.43 |
0.04 |
0.07 |
-1.57 |
-0.13 |
0.08 |
0.17 |
0.2 |
0.13 |
-0.01 |
-0.17 |
-0.01 |
-0.28 |
0.06 |
0.01 |
0.41 |
0.35 |
0.26 |
0.24 |
0.18 |
0.27 |
0.15 |
-0.85 |
-2.6 |
0.13 |
0.9 |
0.07 |
-0.99 |
-0.01 |
0.03 |
0 |
0.34 |
0.55 |
-1.15 |
0.85 |
-1.08 |
0.05 |
-0.03 |
At5g13630 |
250243_at |
GUN5 |
Encodes magnesium chelatase involved in plastid-to-nucleus signal transduction. |
6 |
|
|
chlorophyll biosynthesis |
Porphyrin and chlorophyll metabolism |
|
|
|
|
1.37 |
3.50 |
| At1g23310 |
0.588 |
GGT1 |
Glutamate:glyoxylate aminotransferase 1 (GGT1). Identified by cloning the gene that corresponded to a purified protein having glyoxylate aminotransferase activity. Localized to the peroxisome and thought to be involved in photorespiration/ metabolic salvage pathway. |
0.05 |
0.17 |
0.21 |
0.15 |
0 |
0.05 |
0.17 |
0.01 |
0.08 |
0.08 |
-0.12 |
0.15 |
0.14 |
0.04 |
0.11 |
-0.03 |
-0.15 |
0.11 |
-0.06 |
0.07 |
-0.02 |
0 |
0.08 |
0.14 |
0 |
-0.32 |
-0.46 |
-0.98 |
-0.32 |
-0.46 |
-0.98 |
0 |
0 |
-0.38 |
0 |
-0.06 |
-0.01 |
-0.39 |
0.01 |
0.3 |
0.14 |
0.54 |
0.03 |
0.28 |
0.08 |
0.32 |
0.03 |
0.31 |
0.3 |
0.31 |
0.19 |
0.3 |
0.19 |
0.19 |
0.15 |
0.06 |
0.07 |
0.06 |
0.05 |
0.13 |
0.08 |
0.08 |
-0.4 |
0.15 |
0.23 |
0.24 |
-0.14 |
-0.93 |
0.2 |
0.33 |
-0.23 |
0.05 |
0.07 |
0.2 |
0.13 |
0.16 |
0.04 |
0.34 |
-0.59 |
-0.13 |
0.25 |
-0.04 |
0.1 |
0.21 |
0.17 |
0.22 |
0.18 |
0.08 |
0.07 |
0.1 |
-2.1 |
0.33 |
0.35 |
0.41 |
-1.02 |
0.07 |
-0.17 |
0.12 |
0.18 |
0.31 |
-0.82 |
0.55 |
-0.43 |
0.1 |
-0.23 |
At1g23310 |
262988_at |
GGT1 |
Glutamate:glyoxylate aminotransferase 1 (GGT1). Identified by cloning the gene that corresponded to a purified protein having glyoxylate aminotransferase activity. Localized to the peroxisome and thought to be involved in photorespiration/ metabolic salvage pathway. |
9 |
alanine transaminase activity | glycine transaminase activity | photorespiration |
|
superpathway of serine and glycine biosynthesis II | alanine biosynthesis II | alanine degradation III | photorespiration |
Carbon fixation | Glutamate metabolism | Alanine and aspartate metabolism |
|
|
|
|
1.11 |
2.64 |
| At5g54770 |
0.585 |
THI1 |
Thiamine biosynthetic gene, has dual function in thiamine biosynthesis and mitochondrial DNA damage tolerance. |
-0.04 |
0.12 |
0.22 |
0.26 |
0.07 |
0.24 |
0.09 |
-0.18 |
0.15 |
0.03 |
-0.24 |
-0.02 |
-0.21 |
-0.15 |
-0.09 |
-0.31 |
-0.15 |
-0.27 |
-0.19 |
-0.2 |
-0.23 |
-0.41 |
-0.11 |
0.3 |
0.4 |
-0.02 |
-0.09 |
-0.18 |
-0.02 |
-0.09 |
-0.18 |
0.17 |
0.18 |
-0.03 |
0.28 |
0.24 |
0.03 |
-0.38 |
0.16 |
0.22 |
0.23 |
0.45 |
0.19 |
0.13 |
0.13 |
-0.02 |
0.07 |
0.21 |
0.51 |
0.23 |
0.16 |
0.16 |
0.56 |
0.56 |
0.23 |
-0.02 |
0.35 |
0.14 |
0.09 |
0.43 |
0.37 |
0.04 |
0.16 |
0.24 |
0.1 |
0.34 |
-0.01 |
-0.72 |
-0.04 |
0.07 |
0 |
-0.09 |
-0.05 |
0 |
-0.09 |
-0.38 |
-0.12 |
-0.04 |
-0.03 |
0.31 |
0.2 |
0.31 |
0.45 |
0.28 |
0.18 |
0.16 |
0.06 |
0.09 |
0.11 |
-0.4 |
-2.45 |
-0.06 |
0.41 |
0.08 |
-1.29 |
-0.13 |
-0.06 |
-0.12 |
0.4 |
0.08 |
-1.41 |
0.12 |
-1.3 |
0.1 |
0.01 |
At5g54770 |
248128_at |
THI1 |
Thiamine biosynthetic gene, has dual function in thiamine biosynthesis and mitochondrial DNA damage tolerance. |
6 |
response to DNA damage stimulus | thiamin biosynthesis |
|
|
Thiamine metabolism |
|
|
|
|
0.83 |
3.01 |
| At5g19220 |
0.580 |
ADG2 |
Biochemical studies of adg2-1 mutant indicate that mutant plants do not accumulate ADP glucose pyrophosphorylase (ADGase)large subunit protein and that ADGase small subunits assemble as homotetramers. ADG2 gene may encode the large subunit of ADGase. | Encodes the large subunit of ADP-glucose pyrophosphorylase which catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms (ApL1-4) ha |
-0.07 |
0.04 |
0.08 |
0.04 |
-0.02 |
-0.04 |
0.02 |
0 |
0.03 |
-0.11 |
-0.1 |
-0.01 |
-0.03 |
-0.03 |
0.02 |
0.13 |
-0.06 |
-0.12 |
0.14 |
0.11 |
0.12 |
0.21 |
0.06 |
0.04 |
0.04 |
0.04 |
0.04 |
0.04 |
0.04 |
0.04 |
0.04 |
-0.05 |
0.02 |
-0.62 |
-0.06 |
-0.22 |
0.23 |
-0.37 |
0.22 |
-0.18 |
0.06 |
-0.09 |
0.16 |
-0.03 |
0.45 |
0.16 |
0.08 |
-0.05 |
0.21 |
0.01 |
0.36 |
0.13 |
0.21 |
0.2 |
0.15 |
0.22 |
0.24 |
0.35 |
0.12 |
0.28 |
0.1 |
0.38 |
0.31 |
0.39 |
0.31 |
0.26 |
-0.06 |
-0.98 |
-0.04 |
0.03 |
-1.55 |
0.04 |
-0.23 |
-0.28 |
-0.59 |
0.04 |
-0.1 |
-0.02 |
0 |
-0.49 |
-0.1 |
-0.12 |
0.13 |
0 |
-0.07 |
0.17 |
0.08 |
0.12 |
-0.1 |
0.12 |
-1.55 |
0.79 |
0.37 |
0.45 |
-0.59 |
0.51 |
-0.25 |
-0.45 |
0.24 |
0.4 |
-0.66 |
0.6 |
-0.53 |
0.13 |
-0.11 |
At5g19220 |
249927_at |
ADG2 |
Biochemical studies of adg2-1 mutant indicate that mutant plants do not accumulate ADP glucose pyrophosphorylase (ADGase)large subunit protein and that ADGase small subunits assemble as homotetramers. ADG2 gene may encode the large subunit of ADGase. | Encodes the large subunit of ADP-glucose pyrophosphorylase which catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms (ApL1-4) ha |
10 |
|
C-compound, carbohydrate anabolism |
starch biosynthesis | sucrose biosynthesis | trehalose biosynthesis III | colanic acid building blocks biosynthesis | dTDP-rhamnose biosynthesis | peptidoglycan biosynthesis | UDP-N-acetylglucosamine biosynthesis | galactose degradation I | glucose and glucose-1-phosphate degradation | UDP-glucose conversion | lactose degradation IV | sucrose degradation III |
Starch and sucrose metabolism |
Cell Wall Carbohydrate Metabolism | starch metabolism |
|
|
|
0.99 |
2.35 |
| At1g68010 |
0.578 |
HPR |
Encodes hydroxypyruvate reductase. |
-0.21 |
0.2 |
0.34 |
0.1 |
-0.15 |
0.09 |
0.18 |
-0.01 |
0.06 |
-0.01 |
-0.07 |
0.12 |
0.09 |
0.07 |
0.07 |
-0.03 |
-0.4 |
0.09 |
0.02 |
0 |
0.09 |
-0.01 |
0.16 |
0.3 |
0.21 |
-0.16 |
-0.52 |
-1.05 |
-0.16 |
-0.52 |
-1.05 |
0.09 |
-0.19 |
-0.42 |
-0.04 |
0.04 |
-0.02 |
-0.7 |
0.23 |
0.37 |
0.22 |
0.48 |
0.16 |
0.38 |
0.44 |
0.35 |
0.12 |
0.27 |
0.28 |
0.41 |
0.3 |
0.53 |
0.28 |
0.31 |
-0.21 |
0.25 |
-0.25 |
0.27 |
0.18 |
0.27 |
-0.03 |
0.1 |
-0.85 |
-0.1 |
-0.12 |
-0.05 |
0.06 |
-1.3 |
0.32 |
0.4 |
-0.72 |
0.35 |
-0.02 |
0.35 |
0.17 |
0 |
0.36 |
0.31 |
-0.22 |
-0.11 |
0.15 |
-0.16 |
0.12 |
0.2 |
0.15 |
0.28 |
0.14 |
0.19 |
0.12 |
0 |
-1.94 |
0.39 |
0.45 |
0.4 |
-1.03 |
0.18 |
-0.03 |
0.02 |
0.28 |
0.42 |
-1.11 |
0.71 |
-1.02 |
0.12 |
-0.2 |
At1g68010 |
260014_at |
HPR |
Encodes hydroxypyruvate reductase. |
6 |
photorespiration |
|
serine-isocitrate lyase pathway | formaldehyde assimilation I (serine pathway) | photorespiration |
|
|
|
|
|
1.44 |
2.66 |
| At5g66190 |
0.577 |
|
strong similarity to Ferredoxin--NADP reductase (Pisum sativum, Mesembryanthemum crystallinum, Spinacia oleracea) |
-0.16 |
0.06 |
0.07 |
0.04 |
-0.07 |
0.05 |
0.08 |
-0.09 |
0.01 |
0.02 |
-0.12 |
0.05 |
-0.11 |
-0.16 |
0.06 |
-0.23 |
-0.19 |
-0.05 |
-0.07 |
-0.08 |
0.02 |
-0.16 |
-0.05 |
-0.07 |
-0.45 |
-0.12 |
0.13 |
-0.16 |
-0.12 |
0.13 |
-0.16 |
-0.15 |
-0.14 |
-0.4 |
0.11 |
-0.07 |
0.26 |
-0.28 |
0.23 |
-0.04 |
0.25 |
0.28 |
0.2 |
0.04 |
0.35 |
0 |
0.06 |
0.11 |
0.45 |
0.18 |
0.26 |
0.23 |
0.54 |
0.54 |
0.05 |
0.02 |
0.15 |
0.42 |
0.23 |
0.4 |
0.26 |
0.04 |
-0.48 |
-0.06 |
-0.11 |
0.11 |
-0.21 |
-0.16 |
0.02 |
0.09 |
-0.77 |
0.33 |
-0.01 |
-0.08 |
0.56 |
-0.2 |
0.08 |
-0.15 |
0.27 |
0.25 |
0.16 |
0.09 |
0.15 |
0.21 |
0.04 |
0.13 |
0.07 |
0.14 |
0.12 |
0.2 |
-1.65 |
0.1 |
0.02 |
0.24 |
-0.68 |
-0.08 |
-0.14 |
-0.01 |
0.05 |
0.19 |
-0.56 |
0.21 |
-0.67 |
0.06 |
-0.53 |
At5g66190 |
247131_at |
|
strong similarity to Ferredoxin--NADP reductase (Pisum sativum, Mesembryanthemum crystallinum, Spinacia oleracea) |
6 |
|
|
|
Photosynthesis |
Photosystems | Ferredoxin |
|
|
|
0.91 |
2.22 |
| At5g02120 |
0.575 |
OHP |
Encodes a one helix protein homologous to cyanobacterial high-light inducible proteins. The protein is localized to the thylakoid membrane and its transcript is transiently induced by exposure to high light conditions. |
-0.23 |
0.21 |
0.21 |
0.04 |
-0.16 |
0.13 |
0.18 |
0.1 |
0.09 |
0.08 |
0.01 |
0.16 |
0.22 |
0.31 |
0.12 |
-0.13 |
-0.24 |
0.03 |
-0.1 |
0.12 |
0.02 |
-0.21 |
0.15 |
0.07 |
-0.49 |
0.1 |
-0.31 |
0.03 |
0.1 |
-0.31 |
0.03 |
0.12 |
-0.28 |
-0.6 |
-0.15 |
-0.09 |
0.12 |
-0.78 |
0.18 |
0.36 |
0.27 |
0.5 |
0.08 |
0.32 |
0.18 |
0.56 |
0.23 |
0.26 |
-0.1 |
0.13 |
0.17 |
0.55 |
0.15 |
0.28 |
-0.45 |
0.24 |
-0.56 |
0.19 |
0.07 |
0.13 |
-0.27 |
-0.12 |
-1.82 |
-0.03 |
-0.25 |
-0.02 |
0.19 |
-0.39 |
0.45 |
0.5 |
-0.55 |
0.21 |
0.21 |
0.21 |
0.21 |
0.21 |
0.21 |
0.44 |
0.12 |
0.09 |
0.24 |
-0.48 |
0.02 |
0.18 |
0.15 |
0.34 |
0.3 |
0.2 |
0.05 |
-0.96 |
-2.25 |
0.28 |
0.87 |
0.04 |
-1.12 |
0.1 |
-0.28 |
0.21 |
0.39 |
0.19 |
-1.09 |
0.71 |
-0.82 |
0.33 |
0.44 |
At5g02120 |
251031_at |
OHP |
Encodes a one helix protein homologous to cyanobacterial high-light inducible proteins. The protein is localized to the thylakoid membrane and its transcript is transiently induced by exposure to high light conditions. |
8 |
response to high light intensity |
photosynthesis | biogenesis of chloroplast |
|
|
Photosystems | additional photosystem II components | Early light-inducible proteins |
|
|
|
1.30 |
3.12 |
| At3g06510 |
0.574 |
SFR2 |
glycosyl hydrolase family 1 protein; almost identical to beta-glucosidase (Arabidopsis thaliana) |
-0.49 |
0.05 |
0 |
0.1 |
-0.14 |
-0.04 |
0.11 |
-0.13 |
0 |
-0.04 |
-0.23 |
-0.21 |
0.02 |
0.79 |
-0.24 |
-0.03 |
-0.01 |
-0.22 |
-0.1 |
0 |
-0.21 |
-0.21 |
-0.33 |
0.23 |
0.15 |
0.03 |
-0.22 |
-0.66 |
0.03 |
-0.22 |
-0.66 |
-0.12 |
-0.28 |
-0.04 |
-0.21 |
-0.11 |
-0.26 |
-0.74 |
0.62 |
0.2 |
0.42 |
0.49 |
0.25 |
0.23 |
0.46 |
0.13 |
0.2 |
0.06 |
0.6 |
0.26 |
0.73 |
0.22 |
0.65 |
0.4 |
-0.01 |
0.17 |
0.15 |
0.51 |
0.34 |
0.19 |
0.42 |
0.25 |
-0.85 |
0.19 |
0.02 |
0.03 |
-0.15 |
0.36 |
0.39 |
0.28 |
-0.21 |
-0.09 |
0.02 |
0.03 |
0.1 |
-0.01 |
-0.08 |
0.14 |
-0.06 |
-0.68 |
-0.06 |
0.16 |
-0.18 |
-0.03 |
0.09 |
0 |
0.03 |
0.1 |
0.07 |
-0.13 |
-1.17 |
0.01 |
0.06 |
0.15 |
-0.7 |
-0.13 |
-0.16 |
0.11 |
0.15 |
0.04 |
-0.52 |
0 |
-0.62 |
-0.14 |
0.17 |
At3g06510 |
258512_at |
SFR2 |
glycosyl hydrolase family 1 protein; almost identical to beta-glucosidase (Arabidopsis thaliana) |
6 |
|
|
|
|
|
|
|
Glycoside Hydrolase, Family 1 |
1.16 |
1.96 |
| At3g01500 |
0.571 |
CA1 |
carbonic anhydrase 1, chloroplast / carbonate dehydratase 1 |
-0.07 |
0.12 |
0.28 |
0.26 |
-0.07 |
0.2 |
0.26 |
-0.15 |
0.09 |
0.03 |
-0.28 |
0.02 |
-0.07 |
-0.15 |
0 |
-0.19 |
-0.25 |
0 |
-0.15 |
-0.19 |
-0.17 |
-0.19 |
-0.23 |
-0.55 |
-0.55 |
-0.27 |
0.12 |
-0.93 |
-0.27 |
0.12 |
-0.93 |
-0.06 |
-0.14 |
-0.27 |
0.16 |
0.12 |
0.09 |
-0.68 |
0.24 |
0.08 |
0.06 |
0.28 |
0.19 |
0.06 |
0.14 |
-0.16 |
0.22 |
0.12 |
0.46 |
0.13 |
0.17 |
0.03 |
0.47 |
0.54 |
0.12 |
0.05 |
0.12 |
0.24 |
0.21 |
0.24 |
0.26 |
0.05 |
0.23 |
0.13 |
0.07 |
0.34 |
-0.13 |
-0.93 |
0.02 |
0.21 |
-0.42 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
0.12 |
-0.14 |
0.18 |
0.36 |
0.14 |
0.04 |
0.28 |
0.32 |
0.15 |
0.23 |
0.07 |
0.04 |
0.07 |
0.12 |
-2.02 |
0.26 |
0.76 |
0.33 |
-0.76 |
0.1 |
0.03 |
-0.09 |
0.38 |
0.27 |
-0.77 |
0.89 |
-0.73 |
0.12 |
-0.3 |
At3g01500 |
259161_at |
CA1 |
carbonic anhydrase 1, chloroplast / carbonate dehydratase 1 |
6 |
|
|
cyanate degradation |
Nitrogen metabolism |
|
|
|
|
1.13 |
2.92 |
| At4g37760 |
0.568 |
|
squalene monooxygenase, putative / squalene epoxidase, putative |
-0.41 |
0.14 |
0.27 |
0.03 |
-0.22 |
-0.04 |
0.37 |
-0.21 |
0.02 |
-0.18 |
-0.5 |
0.16 |
0.4 |
1.57 |
0 |
-0.25 |
-0.62 |
0.01 |
-0.18 |
0.05 |
-0.13 |
-0.01 |
-0.15 |
0 |
0.02 |
0.04 |
-0.49 |
-1.14 |
0.04 |
-0.49 |
-1.14 |
0.1 |
-0.13 |
-0.37 |
0.05 |
0.19 |
-0.22 |
-0.61 |
0.39 |
0.22 |
0.32 |
0.45 |
0.36 |
0.26 |
0.67 |
0.43 |
0.12 |
0.25 |
0.81 |
0.11 |
0.47 |
0.4 |
0.37 |
0.55 |
-0.77 |
0.24 |
-0.16 |
0.2 |
0.18 |
0.38 |
-0.01 |
0.38 |
-0.88 |
-0.26 |
0.14 |
-0.26 |
-0.15 |
0.51 |
0.32 |
0.33 |
-0.07 |
0.04 |
0.15 |
0.24 |
0.51 |
0.53 |
0.21 |
0.35 |
-0.77 |
-1.32 |
-0.24 |
-0.54 |
-0.56 |
0.16 |
0.03 |
0.04 |
0.33 |
0.12 |
0.14 |
-0.6 |
-2.42 |
0.07 |
0.73 |
-0.16 |
-1.85 |
0.12 |
-0.87 |
0.2 |
0.51 |
0.5 |
-0.86 |
0.51 |
0.05 |
0.88 |
1.55 |
At4g37760 |
253039_at |
|
squalene monooxygenase, putative / squalene epoxidase, putative |
4 |
sterol biosynthesis |
biosynthesis of derivatives of homoisopentenyl pyrophosphate |
sterol biosynthesis |
Biosynthesis of steroids | Terpenoid biosynthesis |
Isoprenoid Biosynthesis in the Cytosol and in Mitochondria | sterol biosynthesis |
|
triterpene, sterol, and brassinosteroid metabolism |
|
1.52 |
3.99 |
| At3g01550 |
0.564 |
|
similar to triose phosphate/phosphate translocator (Cauliflower)(Brassica oleracea) |
-0.76 |
0.07 |
0.06 |
0.06 |
-0.08 |
-0.63 |
0.44 |
0.07 |
-0.3 |
-0.07 |
-0.15 |
-0.07 |
0.47 |
0 |
0.06 |
0.04 |
-1.02 |
0.1 |
0.66 |
-0.15 |
0.39 |
0.67 |
0.55 |
0.07 |
0.07 |
0.07 |
0.07 |
0.07 |
0.07 |
0.07 |
0.07 |
0.08 |
-0.27 |
-0.31 |
0.03 |
-0.32 |
-0.21 |
-1.01 |
0.31 |
-0.87 |
0.45 |
-0.78 |
0.26 |
-0.79 |
0.81 |
-0.64 |
0.74 |
-0.37 |
1.06 |
-0.26 |
0.36 |
0.36 |
0.2 |
0.72 |
-0.33 |
0.91 |
0.5 |
0.67 |
0.56 |
0.65 |
0.53 |
0.54 |
-0.63 |
0.63 |
0.38 |
0.63 |
-0.65 |
0.56 |
-0.27 |
-0.4 |
-0.08 |
0.07 |
0.07 |
0.07 |
0.07 |
0.07 |
0.07 |
-0.52 |
0.63 |
-0.39 |
-0.17 |
-0.17 |
-0.24 |
0.01 |
-0.12 |
0.01 |
0.34 |
0.06 |
0.08 |
0.07 |
-1.38 |
0.07 |
0.12 |
0.07 |
-1.38 |
0.07 |
-0.53 |
0.07 |
0.15 |
0.38 |
-1.38 |
0.07 |
-1.38 |
0.2 |
0.11 |
At3g01550 |
259185_at |
|
similar to triose phosphate/phosphate translocator (Cauliflower)(Brassica oleracea) |
4 |
triose phosphate transport |
transported compounds (substrates) | C-compound and carbohydrate transport | transport facilitation |
|
|
Phenylpropanoid Metabolism | Aromatic amino acid (Phe, Tyr, Trp) metabolism |
|
|
|
1.65 |
2.44 |
| At3g56940 |
0.564 |
AT103 |
Encodes a putative ZIP protein with varying mRNA accumulation in leaves, stems and roots. Has a consensus carboxylate-bridged di-iron binding site. |
-0.17 |
0.08 |
0.18 |
0.1 |
-0.01 |
0.18 |
0.23 |
-0.06 |
0.08 |
0.03 |
-0.17 |
-0.01 |
-0.16 |
-0.18 |
-0.08 |
-0.22 |
-0.17 |
-0.06 |
-0.18 |
-0.27 |
-0.27 |
-0.27 |
-0.12 |
-0.15 |
-0.62 |
0.06 |
0.33 |
0.19 |
0.06 |
0.33 |
0.19 |
0.18 |
0.11 |
-0.31 |
0.07 |
-0.04 |
0.24 |
-0.35 |
0.07 |
0.09 |
0.06 |
0.24 |
0.04 |
0.04 |
0.11 |
-0.14 |
-0.04 |
0.19 |
0.49 |
0.19 |
0.15 |
0.03 |
0.52 |
0.5 |
0.13 |
-0.09 |
0.2 |
0.12 |
0.05 |
0.27 |
0.21 |
-0.11 |
-0.13 |
0.17 |
-0.01 |
0.37 |
-0.18 |
-0.26 |
-0.05 |
0.05 |
-0.3 |
0.07 |
0.16 |
-0.13 |
0.15 |
-0.07 |
0 |
-0.09 |
-0.02 |
0.28 |
0.07 |
0.15 |
0.25 |
0.22 |
0.13 |
0.19 |
0.03 |
0.13 |
0.05 |
-0.43 |
-1.78 |
0.08 |
0.23 |
0.07 |
-0.64 |
0.03 |
0.09 |
-0.09 |
0.07 |
0.17 |
-0.78 |
0.47 |
-0.52 |
0.02 |
-0.25 |
At3g56940 |
251664_at |
AT103 |
Encodes a putative ZIP protein with varying mRNA accumulation in leaves, stems and roots. Has a consensus carboxylate-bridged di-iron binding site. |
4 |
DNA binding |
transcription | RNA synthesis | mRNA synthesis | transcriptional control |
|
Porphyrin and chlorophyll metabolism |
|
|
|
|
0.74 |
2.30 |
| At4g33010 |
0.559 |
|
strong similarity to Glycine dehydrogenase (decarboxylating) A (Flaveria) |
-0.12 |
0.11 |
0.11 |
0.22 |
-0.15 |
-0.16 |
0.13 |
-0.08 |
-0.15 |
-0.1 |
-0.3 |
-0.21 |
-0.04 |
0.24 |
-0.42 |
-0.3 |
-0.35 |
-0.36 |
-0.08 |
-0.09 |
-0.35 |
-0.3 |
0.01 |
-0.03 |
0.15 |
0.1 |
0.24 |
0.42 |
0.1 |
0.24 |
0.42 |
-0.05 |
0 |
-0.15 |
0.1 |
0.01 |
-0.04 |
-0.72 |
0.31 |
0.06 |
0.34 |
0.13 |
0.41 |
0.02 |
0.52 |
-0.03 |
0.27 |
0.09 |
0.55 |
-0.01 |
0.13 |
0.21 |
0.71 |
0.66 |
0.05 |
0.33 |
0.23 |
0.53 |
0.18 |
0.54 |
0.18 |
0.33 |
-0.6 |
0.07 |
-0.28 |
0 |
-0.09 |
-0.07 |
0.3 |
0.3 |
-0.89 |
-0.32 |
0.18 |
-0.02 |
0.09 |
0.19 |
0.22 |
0.06 |
-1.3 |
-1.01 |
0.13 |
-0.12 |
0.04 |
0.28 |
0.09 |
0.11 |
0.14 |
0.07 |
0.12 |
-0.28 |
-2.35 |
0.04 |
0.81 |
0.15 |
-0.97 |
-0.01 |
0.07 |
-0.03 |
0.4 |
0.3 |
-0.92 |
0.52 |
-0.52 |
-0.03 |
0.38 |
At4g33010 |
253387_at |
|
strong similarity to Glycine dehydrogenase (decarboxylating) A (Flaveria) |
6 |
|
|
glycine degradation I |
Glycine, serine and threonine metabolism |
|
|
|
|
1.38 |
3.17 |
| At5g36700 |
0.557 |
|
similar to phosphoglycolate phosphatase (Chlamydomonas reinhardtii) |
-0.28 |
0.07 |
0.06 |
0.04 |
-0.14 |
-0.11 |
0.09 |
0.01 |
-0.06 |
-0.08 |
-0.21 |
-0.07 |
0.06 |
-0.11 |
0 |
-0.17 |
-0.2 |
-0.15 |
-0.14 |
-0.08 |
-0.11 |
-0.11 |
-0.01 |
-0.04 |
-0.08 |
-0.78 |
0.37 |
0.24 |
-0.78 |
0.37 |
0.24 |
0.18 |
0.05 |
-0.13 |
-0.34 |
-0.2 |
0.01 |
-0.65 |
0.43 |
-0.23 |
0.4 |
-0.24 |
0.36 |
-0.03 |
0.56 |
-0.15 |
0.32 |
-0.19 |
0.43 |
-0.06 |
0.51 |
-0.03 |
0.39 |
0.34 |
0.17 |
0.38 |
0.17 |
0.53 |
0.42 |
0.28 |
0.19 |
0.25 |
-0.38 |
0.13 |
0.23 |
0.21 |
-0.08 |
-0.41 |
-0.24 |
-0.09 |
-0.65 |
0.14 |
0.07 |
0.07 |
0.24 |
-0.14 |
0.28 |
-0.13 |
0.07 |
-0.34 |
0.07 |
-0.24 |
0.04 |
0.08 |
0.06 |
0.13 |
0.11 |
0.16 |
0 |
0.11 |
-1.43 |
0.35 |
0.37 |
0.38 |
-0.64 |
0.28 |
-0.01 |
0.21 |
0.25 |
0.2 |
-0.61 |
0.43 |
-0.67 |
-0.02 |
-0.56 |
At5g36700 |
249658_s_at (m) |
|
similar to phosphoglycolate phosphatase (Chlamydomonas reinhardtii) |
2 |
|
|
superpathway of serine and glycine biosynthesis II | cysteine biosynthesis II | glycine biosynthesis I | serine biosynthesis | photorespiration |
|
|
|
|
|
1.07 |
2.00 |
| At5g36790 |
0.557 |
|
similar to phosphoglycolate phosphatase (Chlamydomonas reinhardtii) |
-0.28 |
0.07 |
0.06 |
0.04 |
-0.14 |
-0.11 |
0.09 |
0.01 |
-0.06 |
-0.08 |
-0.21 |
-0.07 |
0.06 |
-0.11 |
0 |
-0.17 |
-0.2 |
-0.15 |
-0.14 |
-0.08 |
-0.11 |
-0.11 |
-0.01 |
-0.04 |
-0.08 |
-0.78 |
0.37 |
0.24 |
-0.78 |
0.37 |
0.24 |
0.18 |
0.05 |
-0.13 |
-0.34 |
-0.2 |
0.01 |
-0.65 |
0.43 |
-0.23 |
0.4 |
-0.24 |
0.36 |
-0.03 |
0.56 |
-0.15 |
0.32 |
-0.19 |
0.43 |
-0.06 |
0.51 |
-0.03 |
0.39 |
0.34 |
0.17 |
0.38 |
0.17 |
0.53 |
0.42 |
0.28 |
0.19 |
0.25 |
-0.38 |
0.13 |
0.23 |
0.21 |
-0.08 |
-0.41 |
-0.24 |
-0.09 |
-0.65 |
0.14 |
0.07 |
0.07 |
0.24 |
-0.14 |
0.28 |
-0.13 |
0.07 |
-0.34 |
0.07 |
-0.24 |
0.04 |
0.08 |
0.06 |
0.13 |
0.11 |
0.16 |
0 |
0.11 |
-1.43 |
0.35 |
0.37 |
0.38 |
-0.64 |
0.28 |
-0.01 |
0.21 |
0.25 |
0.2 |
-0.61 |
0.43 |
-0.67 |
-0.02 |
-0.56 |
At5g36790 |
249658_s_at (m) |
|
similar to phosphoglycolate phosphatase (Chlamydomonas reinhardtii) |
4 |
|
phosphate metabolism |
superpathway of serine and glycine biosynthesis II | cysteine biosynthesis II | glycine biosynthesis I | serine biosynthesis | photorespiration |
|
|
|
|
|
1.07 |
2.00 |
| At2g05620 |
0.553 |
PGR5 |
Involved in electron flow in Photosystem I. Essential for photoprotection. |
-0.14 |
0.07 |
0.2 |
-0.18 |
-0.27 |
0.03 |
-0.14 |
0.17 |
0.03 |
-0.08 |
-0.09 |
-0.05 |
-0.11 |
-0.27 |
-0.31 |
-0.37 |
-0.19 |
0.06 |
-0.32 |
0.03 |
-0.31 |
-0.53 |
0.13 |
0.11 |
-0.01 |
0.18 |
-0.21 |
-0.28 |
0.18 |
-0.21 |
-0.28 |
0.1 |
-0.22 |
-0.19 |
0.15 |
0.08 |
0.09 |
-0.56 |
0.19 |
-0.1 |
0.18 |
-0.04 |
0.21 |
-0.11 |
0.51 |
-0.09 |
0.23 |
-0.05 |
0.37 |
-0.04 |
0.38 |
0.16 |
0.17 |
0.4 |
-0.43 |
0.28 |
-0.07 |
0.4 |
0.43 |
0.22 |
-0.02 |
0.18 |
-1.15 |
0.57 |
0.52 |
0.69 |
0 |
-0.41 |
0.18 |
0.15 |
0.11 |
0.28 |
0.1 |
-0.04 |
0.35 |
0.16 |
-0.04 |
0.2 |
0.01 |
0.4 |
-0.31 |
-0.42 |
-0.14 |
0.07 |
0 |
0.11 |
0.08 |
0 |
0.04 |
-0.49 |
-1.63 |
0.17 |
0.64 |
0.06 |
-0.91 |
0.16 |
-0.13 |
0.22 |
0.25 |
0.32 |
-0.8 |
0.74 |
0.03 |
0.1 |
0.1 |
At2g05620 |
265569_at |
PGR5 |
Involved in electron flow in Photosystem I. Essential for photoprotection. |
7 |
electron transporter activity | photosynthetic electron transport in photosystem I |
|
|
|
Photosystems | additional photosystem II components | proton gradient regulation |
|
|
|
1.01 |
2.38 |
| At4g37050 |
0.553 |
|
similar to patatin-like latex allergen (Hevea brasiliensis) |
0.02 |
0.02 |
0.02 |
-0.28 |
0.02 |
0.02 |
0.15 |
0.02 |
0.02 |
-0.28 |
0.02 |
0.02 |
-0.28 |
0.02 |
0.02 |
-0.28 |
0.02 |
0.02 |
-0.28 |
0.02 |
0.02 |
-0.28 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
-0.39 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.42 |
0.09 |
-0.05 |
-0.62 |
-0.07 |
-0.56 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
0.02 |
-0.2 |
0.73 |
-0.08 |
0.92 |
-0.49 |
0.93 |
-1.36 |
0.73 |
-0.09 |
1.02 |
-0.4 |
0.02 |
-0.77 |
0.02 |
0.02 |
At4g37050 |
246241_at |
|
similar to patatin-like latex allergen (Hevea brasiliensis) |
4 |
|
storage protein |
|
|
|
Lipid signaling |
|
|
0.77 |
2.38 |
| At1g48100 |
0.546 |
|
glycoside hydrolase family 28 protein, similar to polygalacturonase PG1, PG2 (Glycine max) |
0.35 |
0.07 |
0.1 |
0.07 |
-0.11 |
0.12 |
0.42 |
-0.37 |
-0.09 |
-0.11 |
-0.11 |
0.95 |
2.95 |
4 |
-0.09 |
0.27 |
0.42 |
-0.09 |
0.07 |
-0.11 |
-0.09 |
0.07 |
-0.11 |
0.07 |
0.07 |
0.07 |
0.07 |
0.07 |
0.07 |
0.07 |
0.07 |
0.07 |
0.07 |
1.82 |
0.45 |
0.62 |
0.07 |
-0.34 |
0.48 |
0.14 |
0.4 |
-0.11 |
0.07 |
-0.27 |
0.47 |
-0.28 |
0.24 |
-0.08 |
0.07 |
-0.27 |
0.51 |
-0.06 |
0.07 |
0.49 |
0.07 |
0.19 |
0.07 |
0.07 |
0.11 |
0.07 |
0.44 |
0.46 |
0.07 |
0.07 |
0.14 |
0.4 |
0.07 |
1.33 |
0.07 |
0.07 |
-0.16 |
0.07 |
0.26 |
0.07 |
0.07 |
0.07 |
0.07 |
0.07 |
-1.63 |
0.07 |
-1.37 |
0.28 |
-2.18 |
0.07 |
0.03 |
-0.08 |
-0.31 |
0.1 |
-0.06 |
-1.74 |
-3.05 |
-0.37 |
1.6 |
-0.32 |
-3.05 |
-0.23 |
-0.71 |
-0.03 |
1.13 |
0.56 |
-3.05 |
0.31 |
-2.38 |
0 |
-1.46 |
At1g48100 |
260727_at (m) |
|
glycoside hydrolase family 28 protein, similar to polygalacturonase PG1, PG2 (Glycine max) |
2 |
|
|
|
|
Cell Wall Carbohydrate Metabolism | pectin metabolism |
|
|
|
2.82 |
7.06 |
| At3g63140 |
0.540 |
|
similar to mRNA binding protein precursor (Lycopersicon esculentum) |
-0.25 |
0.05 |
0 |
0.02 |
-0.2 |
-0.17 |
-0.09 |
-0.16 |
-0.15 |
-0.2 |
-0.4 |
-0.31 |
-0.03 |
-0.15 |
-0.18 |
-0.28 |
-0.26 |
-0.17 |
-0.16 |
-0.06 |
-0.34 |
-0.16 |
-0.16 |
0.05 |
0.05 |
0.53 |
0.05 |
0.05 |
0.53 |
0.05 |
0.05 |
-0.02 |
-0.01 |
-0.32 |
0.03 |
-0.14 |
0.23 |
-0.19 |
0.39 |
0.02 |
0.53 |
0.11 |
0.41 |
0.08 |
0.62 |
0.12 |
0.22 |
0.04 |
0.53 |
0.05 |
0.43 |
0.06 |
0.53 |
0.43 |
0.14 |
0.24 |
0.2 |
0.47 |
0.4 |
0.51 |
0.28 |
0.31 |
-0.51 |
0.35 |
0.21 |
0.31 |
-0.24 |
-0.63 |
-0.13 |
-0.08 |
-1.12 |
0.05 |
0.05 |
0.05 |
0.05 |
0.05 |
0.05 |
-0.32 |
0.33 |
0.62 |
-0.15 |
0.06 |
0 |
0.23 |
0.07 |
0.07 |
0.23 |
0.08 |
0.01 |
0.21 |
-1.72 |
0.14 |
0.36 |
0.06 |
-0.75 |
0.28 |
-0.2 |
-0.19 |
0.27 |
-0.13 |
-0.84 |
0.61 |
-0.82 |
-0.06 |
-1.19 |
At3g63140 |
251157_at |
|
similar to mRNA binding protein precursor (Lycopersicon esculentum) |
2 |
|
biogenesis of chloroplast |
colanic acid building blocks biosynthesis | dTDP-rhamnose biosynthesis | galactose degradation I | UDP-glucose conversion | lactose degradation IV |
|
|
|
|
|
1.26 |
2.34 |
| At1g42970 |
0.537 |
GAPB |
Encodes chloroplast localized glyceraldehyde-3-phosphate dehydrogenase. |
-0.12 |
0.11 |
0.25 |
0.2 |
-0.09 |
0.16 |
0.03 |
-0.1 |
0.07 |
-0.01 |
-0.24 |
-0.01 |
-0.2 |
-0.11 |
-0.03 |
-0.28 |
-0.12 |
-0.06 |
-0.21 |
-0.12 |
-0.11 |
-0.26 |
-0.06 |
-0.2 |
-0.46 |
0.05 |
0.1 |
-0.31 |
0.05 |
0.1 |
-0.31 |
0.05 |
-0.08 |
-0.34 |
0.09 |
-0.03 |
0.14 |
-0.44 |
0.15 |
0.16 |
0.28 |
0.35 |
0.11 |
0.11 |
0.22 |
0 |
0.09 |
0.21 |
0.32 |
0.25 |
0.22 |
0.23 |
0.35 |
0.44 |
0.1 |
0.04 |
0.12 |
0.24 |
0.28 |
0.33 |
0.14 |
0.16 |
-0.28 |
0.02 |
-0.08 |
0.12 |
-0.02 |
-0.63 |
0.02 |
0.18 |
-0.32 |
0.09 |
-0.52 |
0.3 |
-0.4 |
-0.73 |
-0.86 |
-0.03 |
0.25 |
0.45 |
0.06 |
0.01 |
0.23 |
0.3 |
0.08 |
0.24 |
0.13 |
0.14 |
0.03 |
-0.17 |
-1.84 |
0.22 |
0.59 |
0.26 |
-0.52 |
0.15 |
0.05 |
-0.13 |
0.44 |
0.25 |
-0.65 |
0.62 |
-0.68 |
0.42 |
0.19 |
At1g42970 |
259625_at |
GAPB |
Encodes chloroplast localized glyceraldehyde-3-phosphate dehydrogenase. |
10 |
|
C-compound and carbohydrate metabolism | glycolysis and gluconeogenesis | photosynthesis |
gluconeogenesis | glycerol degradation II | sorbitol fermentation | fructose degradation (anaerobic) | acetate fermentation | glycolysis I | glyceraldehyde 3-phosphate degradation | glycolysis IV |
Glycolysis / Gluconeogenesis |
Intermediary Carbon Metabolism |
|
|
|
1.02 |
2.45 |
| At1g02410 |
0.536 |
|
cytochrome c oxidase assembly protein CtaG / Cox11 family |
-0.13 |
-0.03 |
0.18 |
0.03 |
0.06 |
-0.1 |
0.17 |
-0.05 |
0.16 |
-0.15 |
-0.28 |
0.02 |
0.05 |
0.14 |
-0.09 |
-0.01 |
-0.44 |
-0.09 |
-0.04 |
0.01 |
-0.16 |
-0.2 |
-0.08 |
0.01 |
0.04 |
0.07 |
0 |
0.09 |
0.07 |
0 |
0.09 |
0.09 |
-0.07 |
-0.15 |
-0.06 |
-0.03 |
-0.14 |
-0.38 |
0.18 |
0.22 |
-0.07 |
0.4 |
0.14 |
0.36 |
0.03 |
0.21 |
0.13 |
0.01 |
-0.05 |
0.27 |
0.08 |
0.32 |
-0.36 |
-0.32 |
0.69 |
-0.06 |
0.17 |
0.04 |
0.01 |
-0.19 |
0.14 |
-0.1 |
0.95 |
-0.08 |
0.25 |
-0.15 |
0.26 |
0.65 |
0.31 |
0.25 |
0.38 |
-0.27 |
0.09 |
0.09 |
0.05 |
0.11 |
0.26 |
0.12 |
-0.26 |
-0.32 |
-0.19 |
-0.03 |
-0.37 |
-0.05 |
-0.1 |
-0.05 |
-0.02 |
0.02 |
-0.05 |
-0.24 |
-0.97 |
0 |
-0.1 |
0 |
-0.73 |
0.06 |
-0.33 |
0.04 |
-0.04 |
0.16 |
-0.61 |
0.33 |
-0.26 |
-0.04 |
0.07 |
At1g02410 |
259446_at |
|
cytochrome c oxidase assembly protein CtaG / Cox11 family |
2 |
|
|
|
Oxidative phosphorylation |
|
|
|
|
0.71 |
1.91 |
| At4g22570 |
0.536 |
|
strong similarity to Adenine phosphoribosyltransferase (Hordeum vulgare subsp. vulgare) |
-0.62 |
0.22 |
0.14 |
-0.07 |
-0.46 |
0.49 |
1.11 |
1.01 |
0.13 |
0 |
0.19 |
0.09 |
0.27 |
0.96 |
0.04 |
-0.31 |
0.11 |
-0.28 |
-0.3 |
-0.13 |
-0.27 |
-0.28 |
0.12 |
-0.52 |
-0.71 |
0.22 |
0.06 |
0 |
0.22 |
0.06 |
0 |
0.23 |
0.12 |
0.62 |
0.12 |
-0.1 |
0.02 |
-0.64 |
0.24 |
0.15 |
0.18 |
0.06 |
0.16 |
0.17 |
0.16 |
0.05 |
0.13 |
0.04 |
0.08 |
0 |
0.08 |
0.15 |
-0.01 |
0.09 |
-1.01 |
0.34 |
-0.33 |
0.49 |
0.28 |
0.21 |
0.18 |
0.35 |
-0.54 |
0.51 |
0.01 |
0.37 |
0.22 |
0.13 |
0.01 |
0.07 |
-0.14 |
0.62 |
0.33 |
-0.08 |
-0.04 |
0.1 |
0 |
-0.33 |
0.27 |
-0.21 |
0.26 |
-0.34 |
-0.07 |
0.25 |
0.23 |
0.37 |
0.3 |
0.23 |
0.18 |
0.22 |
-1.75 |
0.22 |
-0.34 |
0.22 |
-1.26 |
0.22 |
-0.49 |
0.22 |
-0.22 |
0.22 |
-1.11 |
0.22 |
-1.75 |
0.55 |
-1.96 |
At4g22570 |
254328_at |
|
strong similarity to Adenine phosphoribosyltransferase (Hordeum vulgare subsp. vulgare) |
6 |
|
purine nucleotide metabolism |
de novo biosynthesis of pyrimidine ribonucleotides |
Nucleotide Metabolism | Purine metabolism |
|
|
|
|
1.49 |
3.08 |
| At3g17040 |
0.534 |
HCF107 |
Required for normal processing of transcripts from the polycistronic chloroplast psbB-psbT-psbH-petB-petD operon coding for proteins of the photosystem II and cytochrome b6/f complexes. |
-0.12 |
0.12 |
0.15 |
0.06 |
-0.06 |
0.04 |
-0.01 |
0.17 |
0.28 |
0.04 |
0.39 |
0.19 |
0.14 |
-0.41 |
0.05 |
-0.1 |
-0.01 |
0.08 |
-0.04 |
0.12 |
0.16 |
-0.03 |
0.24 |
-0.06 |
0.09 |
-0.48 |
-0.05 |
-0.06 |
-0.48 |
-0.05 |
-0.06 |
0.09 |
-0.36 |
-0.16 |
0.01 |
-0.07 |
-0.07 |
-0.64 |
0.23 |
-0.28 |
0.06 |
-0.25 |
0.07 |
0.02 |
0.32 |
0.16 |
0.31 |
-0.09 |
0.19 |
0 |
0.22 |
0.21 |
-0.09 |
0.19 |
-0.28 |
0.28 |
0 |
0.25 |
0.16 |
0.12 |
0.34 |
0 |
-0.16 |
0.25 |
0.31 |
0.43 |
-0.07 |
-0.11 |
0.08 |
0.32 |
-1.35 |
0.12 |
-0.08 |
0.22 |
-0.35 |
0 |
0.19 |
-0.08 |
0.02 |
-0.25 |
-0.17 |
-0.01 |
0.12 |
0.17 |
0.07 |
-0.04 |
0.21 |
-0.04 |
0.13 |
-1.59 |
-2.41 |
0.6 |
0.48 |
0.44 |
-0.3 |
0.33 |
-0.03 |
0.26 |
0.39 |
0.69 |
-0.73 |
0.78 |
-0.33 |
0.14 |
0.08 |
At3g17040 |
257932_at |
HCF107 |
Required for normal processing of transcripts from the polycistronic chloroplast psbB-psbT-psbH-petB-petD operon coding for proteins of the photosystem II and cytochrome b6/f complexes. |
4 |
RNA processing | plastid organization and biogenesis |
|
|
|
mRNA processing in chloroplast |
|
|
|
0.90 |
3.19 |
| At1g78720 |
0.532 |
|
similar to Protein transport protein Sec61 alpha subunit isoform 1 from Canis familiaris |
-0.11 |
0.01 |
0.01 |
0.01 |
0.07 |
0.01 |
0.01 |
0.07 |
-0.11 |
0.01 |
0.07 |
0.01 |
0.01 |
0.07 |
0.01 |
0.01 |
0.07 |
0.01 |
0.01 |
0.07 |
0.01 |
0.01 |
0.07 |
0.01 |
0.01 |
0.01 |
0.01 |
0.01 |
0.01 |
0.01 |
0.01 |
0.47 |
0.4 |
0.16 |
0.01 |
0.01 |
0.01 |
0.01 |
0.01 |
0.01 |
0.01 |
0.01 |
-0.02 |
0.01 |
0.01 |
0.01 |
0.01 |
0.01 |
0.01 |
0.01 |
0.01 |
0.01 |
0.01 |
0.01 |
0.03 |
0.01 |
0.01 |
0.01 |
0.01 |
0.01 |
0.01 |
0.01 |
0.01 |
0.01 |
0.01 |
0.01 |
-0.06 |
0.01 |
0.15 |
0.25 |
-0.35 |
0.07 |
-0.08 |
0.24 |
0.02 |
-0.16 |
-0.17 |
0.33 |
1.23 |
-0.33 |
0.01 |
-0.79 |
0.01 |
-0.54 |
-0.08 |
-0.11 |
0.28 |
-0.21 |
0.23 |
0.01 |
-1.06 |
0.32 |
0.07 |
0.01 |
-0.99 |
0.4 |
-0.5 |
0.01 |
-0.34 |
0.61 |
-0.48 |
0.53 |
-0.13 |
0.05 |
-0.34 |
At1g78720 |
264296_at |
|
similar to Protein transport protein Sec61 alpha subunit isoform 1 from Canis familiaris |
2 |
|
|
|
Folding, Sorting and Degradation | Protein export |
|
|
|
|
0.84 |
2.29 |
| At4g37200 |
0.532 |
HCF164 |
Encodes thioredoxin-like protein with disulfide reductase activity that is involved in the biogenesis of the plastid cytochrome b6f complex. Protein is located in the thylakoid membrane with the C-terminal hydrophilic portion, containing the thioredoxin |
-0.03 |
0.03 |
-0.07 |
0.03 |
-0.05 |
-0.19 |
-0.01 |
0.01 |
-0.03 |
-0.01 |
-0.06 |
-0.13 |
0.07 |
0.28 |
0.13 |
0.05 |
-0.04 |
-0.02 |
0.05 |
0.16 |
0.1 |
0.11 |
0.21 |
-0.08 |
-0.1 |
-0.02 |
0.18 |
-0.17 |
-0.02 |
0.18 |
-0.17 |
-0.05 |
-0.13 |
-0.27 |
-0.14 |
-0.08 |
0.04 |
-0.31 |
0.16 |
-0.13 |
0.12 |
0.07 |
0.31 |
0.08 |
0.37 |
0.06 |
0.09 |
0.02 |
0.15 |
-0.1 |
0.28 |
0.23 |
0.23 |
0.32 |
-0.16 |
0.04 |
-0.03 |
0.24 |
0.09 |
0.01 |
0.16 |
0.04 |
-0.75 |
-0.1 |
0.2 |
-0.03 |
0.03 |
-0.07 |
0.28 |
0.36 |
-0.16 |
-0.09 |
0.12 |
0.16 |
0.05 |
0.16 |
0.09 |
0.3 |
-0.52 |
-0.68 |
0.3 |
-0.56 |
-0.11 |
0.1 |
0.12 |
-0.03 |
0.15 |
-0.18 |
-0.06 |
-0.44 |
-0.68 |
0.08 |
0.02 |
0.08 |
-0.41 |
-0.01 |
-0.2 |
0.13 |
0.09 |
0.14 |
-0.5 |
0.18 |
-0.28 |
0.22 |
0.33 |
At4g37200 |
246226_at |
HCF164 |
Encodes thioredoxin-like protein with disulfide reductase activity that is involved in the biogenesis of the plastid cytochrome b6f complex. Protein is located in the thylakoid membrane with the C-terminal hydrophilic portion, containing the thioredoxin |
10 |
oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor | cytochrome b6f complex assembly |
electron transport and membrane-associated energy conservation |
|
|
Thylakoid biogenesis and photosystem assembly |
|
|
|
0.79 |
1.12 |
| At1g62750 |
0.527 |
|
elongation factor Tu family protein |
-0.04 |
0.1 |
0.05 |
0.05 |
-0.22 |
-0.18 |
0.1 |
0.09 |
-0.04 |
0.09 |
-0.05 |
-0.16 |
0.07 |
-0.64 |
-0.11 |
0.09 |
-0.19 |
-0.04 |
0.15 |
0.04 |
-0.08 |
0.03 |
0.16 |
0.03 |
-0.05 |
0.26 |
-0.05 |
0.33 |
0.26 |
-0.05 |
0.33 |
0.03 |
-0.25 |
-0.23 |
-0.04 |
0.01 |
-0.02 |
-0.57 |
0.17 |
-0.21 |
0.26 |
0.03 |
0.18 |
0.09 |
0.2 |
0.11 |
0.22 |
0.15 |
0.1 |
-0.03 |
0.33 |
0.15 |
0.23 |
0.19 |
-0.19 |
0.28 |
-0.02 |
0.25 |
0.07 |
0.08 |
0.15 |
0.56 |
-0.83 |
-0.13 |
-0.28 |
-0.2 |
0.1 |
-0.24 |
0.19 |
0.23 |
-1.21 |
-0.2 |
0.01 |
-0.04 |
0.51 |
0.25 |
-0.33 |
0.14 |
-0.01 |
-0.55 |
-0.09 |
-0.25 |
0.14 |
0.14 |
0.19 |
0.06 |
0.14 |
0.13 |
0.01 |
-0.3 |
-2.33 |
0.42 |
0.74 |
0.22 |
-0.92 |
0.21 |
-0.44 |
-0.08 |
0.3 |
0.19 |
-0.72 |
0.73 |
-0.09 |
0.36 |
1.18 |
At1g62750 |
262645_at |
|
elongation factor Tu family protein |
2 |
|
|
|
Translation factors |
|
|
|
|
1.04 |
3.51 |
| At3g48420 |
0.527 |
|
haloacid dehalogenase-like hydrolase family protein |
-0.03 |
0.07 |
0.01 |
-0.05 |
-0.18 |
-0.2 |
-0.06 |
-0.12 |
-0.25 |
-0.06 |
-0.24 |
-0.09 |
0.03 |
-0.03 |
-0.1 |
-0.12 |
-0.2 |
-0.32 |
-0.04 |
-0.09 |
-0.21 |
-0.05 |
-0.1 |
-0.57 |
-0.2 |
0.07 |
0.07 |
2.23 |
0.07 |
0.07 |
2.23 |
0.16 |
0.15 |
-0.02 |
-0.31 |
-0.23 |
-0.01 |
-0.5 |
0.4 |
-0.27 |
0.41 |
-0.22 |
0.21 |
-0.21 |
0.41 |
0.01 |
0.17 |
-0.21 |
0.31 |
-0.22 |
0.45 |
-0.02 |
0.23 |
0 |
0.25 |
0.1 |
0.05 |
0.48 |
0.17 |
0.16 |
0.28 |
0.22 |
-0.38 |
0.44 |
0.57 |
0.46 |
-0.05 |
1.49 |
-0.04 |
0.06 |
-1.6 |
0.07 |
0.07 |
0.07 |
0.07 |
0.07 |
0.07 |
0.03 |
0.79 |
0.19 |
-0.13 |
-0.28 |
0.03 |
0.23 |
0 |
0.17 |
0.26 |
0.15 |
-0.02 |
0.07 |
-2.41 |
0.07 |
0.43 |
0.07 |
-2.41 |
0.07 |
-1.39 |
0.07 |
0.22 |
0.07 |
-0.95 |
0.07 |
-0.9 |
0.18 |
0.1 |
At3g48420 |
252366_at |
|
haloacid dehalogenase-like hydrolase family protein |
2 |
|
|
superpathway of serine and glycine biosynthesis II | cysteine biosynthesis II | glycine biosynthesis I | serine biosynthesis | photorespiration |
|
|
|
|
|
1.31 |
4.65 |
| At3g59400 |
0.526 |
GUN4 |
GUN, genomes uncoupled, is necessary for coupling the expression of some nuclear genes to the functional state of the chloroplast. Binds to the magnesium chelatase complex and promotes formation of the substrate,a tetrapyrrole signaling molecule. |
-0.68 |
0.18 |
0.18 |
0.18 |
-0.47 |
0.18 |
0.23 |
0.17 |
0.13 |
0.26 |
0.07 |
0.15 |
0.21 |
-0.45 |
0.16 |
-0.08 |
-0.22 |
0.28 |
0.03 |
-0.18 |
0.08 |
0.21 |
-0.17 |
-0.36 |
-0.95 |
1.15 |
0.89 |
0.86 |
1.15 |
0.89 |
0.86 |
-0.15 |
-0.46 |
-0.93 |
-0.06 |
-0.06 |
0.49 |
-0.32 |
0.02 |
0.15 |
0.32 |
0.15 |
0.14 |
0.2 |
0.11 |
0.36 |
0.24 |
0.21 |
0.11 |
0.21 |
-0.05 |
0.17 |
-0.05 |
0.28 |
-0.57 |
0.47 |
-0.28 |
-0.03 |
0.17 |
0.22 |
0.05 |
0.26 |
-1.89 |
0.22 |
-0.66 |
0.28 |
-0.19 |
-0.18 |
0.04 |
0.07 |
-0.67 |
0.18 |
0.18 |
0.18 |
0.18 |
0.18 |
0.18 |
0.03 |
-0.5 |
-0.79 |
-0.15 |
-0.14 |
0.23 |
0.33 |
0.22 |
0.19 |
0.19 |
0.13 |
0.11 |
-1.88 |
-3.05 |
0.24 |
0.67 |
0.07 |
-0.84 |
0.13 |
0.13 |
0.3 |
0.37 |
0.84 |
-1.24 |
1.37 |
-1.1 |
0.08 |
-0.46 |
At3g59400 |
251519_at |
GUN4 |
GUN, genomes uncoupled, is necessary for coupling the expression of some nuclear genes to the functional state of the chloroplast. Binds to the magnesium chelatase complex and promotes formation of the substrate,a tetrapyrrole signaling molecule. |
10 |
enzyme binding | tetrapyrrole binding | chloroplast-nucleus signaling pathway | positive regulation of enzyme activity |
|
|
|
Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Regulatory enzymes |
|
|
|
1.81 |
4.42 |
| At2g23000 |
0.522 |
|
serine carboxypeptidase S10 family protein |
-1.26 |
0.07 |
-0.21 |
0.22 |
-0.42 |
-0.52 |
0.07 |
0.38 |
-0.05 |
0.23 |
0.31 |
-0.15 |
0.52 |
1.71 |
0.07 |
0.77 |
1.81 |
-0.09 |
0.36 |
-0.2 |
0.26 |
0.43 |
0.38 |
-0.19 |
-0.61 |
-0.44 |
0.62 |
0.03 |
-0.44 |
0.62 |
0.03 |
-0.06 |
-0.64 |
0.1 |
0.04 |
0.19 |
-0.38 |
-0.97 |
0.31 |
-0.38 |
0.22 |
-0.59 |
0.17 |
-0.16 |
0.59 |
-0.53 |
0.41 |
-0.57 |
0.67 |
0.41 |
0.42 |
-0.03 |
0.17 |
0.02 |
0.46 |
1.13 |
0.14 |
0.57 |
0.63 |
0.78 |
0.96 |
0.56 |
0.6 |
0.21 |
0.19 |
0.44 |
-1.58 |
0.56 |
-0.86 |
-1.1 |
-0.18 |
0.18 |
0.11 |
0.31 |
0.35 |
0.33 |
0.04 |
-1.09 |
0.52 |
-1.73 |
-1.18 |
-1.09 |
-1.32 |
0.09 |
0.13 |
0.13 |
0.13 |
0.19 |
0.02 |
0.17 |
-1.7 |
0.27 |
0.82 |
0.25 |
-1.43 |
0.28 |
-0.71 |
0.24 |
0.48 |
0.37 |
-1.35 |
0.09 |
-1.19 |
-0.16 |
0.21 |
At2g23000 |
267256_s_at |
|
serine carboxypeptidase S10 family protein |
2 |
|
|
|
|
|
|
|
serine carboxy peptidase like, clade IA |
2.09 |
3.54 |
| At5g03650 |
0.521 |
SBE2.2 |
Encodes starch branching enzyme (E.C.2.4.1.18) similar to SBE2 from maize and rice. Expressed throughout the plant and highest in seedlings and cauline leaves. |
-0.25 |
0.08 |
0.01 |
-0.01 |
-0.15 |
0.15 |
0.22 |
0.05 |
0.02 |
0.26 |
0.14 |
0.18 |
0.28 |
-0.08 |
0.18 |
0.06 |
-0.5 |
0.03 |
0.06 |
0.05 |
-0.1 |
0.13 |
-0.25 |
-0.1 |
0.09 |
0.31 |
-0.15 |
-0.5 |
0.31 |
-0.15 |
-0.5 |
-0.01 |
-0.12 |
-0.18 |
-0.18 |
-0.12 |
-0.08 |
-0.55 |
0.42 |
-0.1 |
0.34 |
-0.25 |
0.42 |
-0.01 |
0.4 |
0.01 |
0.2 |
0.03 |
0.01 |
0.1 |
0.34 |
-0.1 |
0.43 |
0.09 |
-0.03 |
0.18 |
0.24 |
0.54 |
0.44 |
0.13 |
0.19 |
0.48 |
0.16 |
-0.07 |
-0.22 |
-0.19 |
-0.16 |
0.46 |
-0.46 |
-0.2 |
-1.1 |
0.04 |
0.21 |
0 |
0.08 |
0.55 |
0.07 |
-0.34 |
0 |
-0.2 |
0.17 |
-0.23 |
-0.34 |
0.08 |
0.12 |
0.24 |
-0.13 |
-0.01 |
0.08 |
-0.24 |
-0.93 |
0.1 |
0.36 |
0.18 |
-0.65 |
0.45 |
-0.36 |
0.27 |
0.16 |
0.4 |
-0.38 |
0.4 |
-0.59 |
-0.18 |
-0.71 |
At5g03650 |
250906_at |
SBE2.2 |
Encodes starch branching enzyme (E.C.2.4.1.18) similar to SBE2 from maize and rice. Expressed throughout the plant and highest in seedlings and cauline leaves. |
6 |
amylopectin biosynthesis |
C-compound, carbohydrate catabolism | sugar, glucoside, polyol and carboxylate catabolism |
starch biosynthesis |
Starch and sucrose metabolism |
Cell Wall Carbohydrate Metabolism | starch metabolism |
|
|
|
0.98 |
1.65 |
| At5g58770 |
0.520 |
|
dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putative |
-0.52 |
-0.03 |
-0.25 |
-1.03 |
-0.95 |
-0.93 |
-1 |
-0.69 |
-0.48 |
-0.51 |
-0.75 |
-0.21 |
0.5 |
1.02 |
-0.83 |
-1.25 |
0.28 |
-0.68 |
-0.01 |
0.31 |
-0.04 |
-0.5 |
0.35 |
-0.03 |
-0.03 |
-0.03 |
-0.03 |
-0.03 |
-0.03 |
-0.03 |
-0.03 |
1.54 |
0.8 |
-0.03 |
-0.39 |
0.43 |
-1.53 |
-1.71 |
0.78 |
0.18 |
0.6 |
0.5 |
0.71 |
0.63 |
1.06 |
0.44 |
0.51 |
-0.16 |
0.05 |
0.65 |
1.38 |
0.53 |
0.8 |
0.31 |
0.57 |
0.1 |
0.83 |
0.79 |
0.87 |
0.59 |
0.95 |
0.25 |
-2.49 |
-0.23 |
0.73 |
-0.41 |
-0.04 |
-0.03 |
0.42 |
0.26 |
-2.81 |
-0.03 |
0.17 |
-0.28 |
0.01 |
0.44 |
-0.06 |
0.44 |
-0.03 |
-3.62 |
-0.03 |
-0.03 |
-0.03 |
-0.03 |
-0.03 |
0.05 |
-0.03 |
-0.34 |
-0.2 |
-0.03 |
-2.79 |
-0.03 |
1.28 |
-0.03 |
-2.79 |
-0.03 |
-2.79 |
-0.03 |
0.46 |
1.89 |
-2.79 |
3.2 |
0.71 |
2.93 |
4.45 |
At5g58770 |
247780_at |
|
dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putative |
4 |
dolichol biosynthesis | dehydrodolichyl diphosphate synthase activity |
C-compound and carbohydrate metabolism |
polyisoprenoid biosynthesis |
|
Isoprenoid Biosynthesis in the Cytosol and in Mitochondria | Biosynthesis of prenyl diphosphates |
|
polyprenyl diphosphate biosynthesis |
|
4.10 |
8.07 |
| At4g11600 |
0.516 |
ATGPX6 |
Encodes glutathione peroxidase. |
-0.08 |
-0.16 |
-0.08 |
-0.08 |
-0.09 |
-0.16 |
-0.16 |
-0.22 |
-0.1 |
-0.16 |
-0.35 |
-0.17 |
0.07 |
0.59 |
-0.32 |
-0.14 |
-0.44 |
-0.34 |
-0.32 |
-0.05 |
-0.27 |
0.01 |
-0.4 |
-0.15 |
-0.27 |
-0.22 |
-0.3 |
-0.8 |
-0.22 |
-0.3 |
-0.8 |
-0.27 |
-0.32 |
-0.49 |
0.09 |
0.34 |
-0.25 |
-0.6 |
0.49 |
0.53 |
0.3 |
0.41 |
0.45 |
0.21 |
0.41 |
0.16 |
-0.03 |
-0.15 |
0.23 |
-0.03 |
0.81 |
0.16 |
0.92 |
0.11 |
0.42 |
-0.26 |
0.65 |
0.26 |
0.67 |
0.06 |
1.13 |
-0.13 |
-0.17 |
-0.2 |
0.6 |
-0.2 |
0.19 |
-0.24 |
0.37 |
0.33 |
1.02 |
-0.03 |
-0.03 |
-0.02 |
0.59 |
-0.28 |
0.05 |
0.53 |
0.02 |
-0.15 |
0.15 |
0.12 |
-0.23 |
-0.1 |
-0.04 |
-0.51 |
0.12 |
-0.19 |
-0.08 |
-0.23 |
-0.85 |
-0.25 |
0.23 |
0.09 |
-0.83 |
-0.25 |
-0.63 |
0.16 |
0.19 |
0.27 |
-0.99 |
0.56 |
0.64 |
-0.09 |
0.56 |
At4g11600 |
254890_at |
ATGPX6 |
Encodes glutathione peroxidase. |
6 |
|
stress response | detoxification |
|
Glutathione metabolism |
Biosynthesis of Amino Acids and Derivatives | Glutathione metabolism |
|
|
|
1.27 |
2.14 |
| At1g64500 |
0.515 |
|
glutaredoxin family protein |
-0.57 |
0.36 |
0.75 |
0.24 |
-0.13 |
0.28 |
0.21 |
-0.08 |
0.23 |
-0.06 |
-0.06 |
0.22 |
0.32 |
-0.63 |
-0.19 |
-1.13 |
-0.33 |
0.38 |
0.06 |
0.07 |
0.11 |
-0.17 |
0.27 |
0.36 |
0.36 |
0.78 |
0.36 |
-0.1 |
0.78 |
0.36 |
-0.1 |
-0.26 |
-0.68 |
-1.07 |
-0.2 |
-0.22 |
-0.86 |
-1.09 |
0.23 |
0.45 |
0.44 |
0.51 |
0.36 |
0.56 |
0.62 |
0.66 |
0.28 |
0.34 |
0.11 |
0.51 |
0.3 |
0.53 |
0.24 |
0.55 |
-0.36 |
0.37 |
-0.16 |
0.35 |
0.16 |
0.28 |
0.01 |
0.34 |
-2 |
-0.08 |
-0.65 |
0.08 |
-0.28 |
-0.5 |
0.6 |
0.42 |
-0.18 |
0.36 |
0.36 |
0.36 |
0.36 |
0.36 |
0.55 |
0.6 |
-2.33 |
-0.69 |
0.36 |
-2.21 |
-0.4 |
0.24 |
0.41 |
0.56 |
0.51 |
0.28 |
0.13 |
-2.35 |
-3.09 |
0.43 |
1.52 |
0.12 |
-3.09 |
-0.08 |
-0.52 |
0.04 |
1.09 |
0.38 |
-2.62 |
0.77 |
0.17 |
1.55 |
2.22 |
At1g64500 |
261958_at |
|
glutaredoxin family protein |
2 |
|
|
TCA cycle variation VIII | TCA cycle variation IV | TCA cycle -- aerobic respiration |
|
|
|
|
|
2.95 |
5.31 |
| At3g50820 |
0.513 |
|
Encodes a protein which is an extrinsic subunit of photosystem II and which has been proposed to play a central role in stabilization of the catalytic manganese cluster. In Arabidopsis thaliana the PsbO proteins are encoded by two genes |
-0.21 |
0.11 |
0.21 |
0.12 |
-0.21 |
0.19 |
0.2 |
-0.09 |
0.11 |
0.03 |
-0.22 |
0.09 |
0.02 |
0.08 |
0.06 |
-0.15 |
-0.17 |
0.02 |
-0.16 |
-0.21 |
-0.16 |
-0.28 |
-0.2 |
-0.12 |
-0.06 |
0.11 |
0.39 |
0.11 |
0.11 |
0.39 |
0.11 |
-0.06 |
-0.26 |
-0.47 |
0.01 |
-0.15 |
0.18 |
-0.5 |
0.12 |
0.05 |
0.25 |
0.15 |
0.12 |
0.02 |
0.3 |
-0.03 |
0.03 |
0.13 |
0.44 |
0.16 |
0.04 |
0.19 |
0.45 |
0.4 |
0.03 |
0.08 |
-0.02 |
0.19 |
0.11 |
0.31 |
0.12 |
0.03 |
-0.98 |
0.09 |
-0.26 |
0.16 |
-0.6 |
-0.7 |
-0.21 |
-0.07 |
-0.48 |
0.11 |
0.11 |
0.11 |
0.11 |
0.11 |
0.11 |
-0.33 |
-0.03 |
0.3 |
0.09 |
0.12 |
0.23 |
0.26 |
0.04 |
0.3 |
0.05 |
0.21 |
0 |
0.11 |
-3.11 |
0.11 |
0.23 |
0.39 |
-0.4 |
0.11 |
0.19 |
0.11 |
0.17 |
0.55 |
-0.48 |
0.69 |
-0.51 |
0.26 |
0.02 |
At3g50820 |
252130_at |
|
Encodes a protein which is an extrinsic subunit of photosystem II and which has been proposed to play a central role in stabilization of the catalytic manganese cluster. In Arabidopsis thaliana the PsbO proteins are encoded by two genes |
7 |
photosystem II assembly | photosystem II stabilization |
photosynthesis |
|
Photosynthesis |
Photosystems | Photosystem II |
|
|
|
0.89 |
3.80 |
| At4g28660 |
0.506 |
|
photosystem II reaction centre W (PsbW) family protein |
-0.22 |
0.04 |
0.04 |
0.04 |
-0.19 |
-0.11 |
0.1 |
0.04 |
-0.08 |
0.02 |
-0.25 |
-0.16 |
-0.13 |
-0.61 |
-0.14 |
-0.16 |
-0.21 |
-0.16 |
-0.1 |
-0.08 |
-0.23 |
-0.33 |
-0.03 |
0.02 |
-0.19 |
-0.16 |
0.06 |
0.16 |
-0.16 |
0.06 |
0.16 |
-0.03 |
-0.41 |
-0.32 |
-0.01 |
-0.09 |
0.14 |
-0.66 |
0.28 |
-0.03 |
0.28 |
-0.15 |
0.24 |
0.14 |
0.32 |
0.02 |
0.13 |
0.03 |
-0.14 |
0.11 |
0.28 |
-0.13 |
0.34 |
0.22 |
-0.33 |
0.22 |
-0.06 |
0.4 |
0.15 |
0.31 |
0.15 |
0.07 |
-0.57 |
-0.35 |
-0.51 |
-0.48 |
0.41 |
-0.4 |
0.3 |
0.3 |
-0.19 |
0.18 |
0.15 |
0.05 |
-0.07 |
0.18 |
0.05 |
0.06 |
0.53 |
0.68 |
0.03 |
-0.22 |
0.17 |
0.18 |
0.13 |
0.09 |
0.11 |
0.08 |
0.01 |
-0.23 |
-2.27 |
0.28 |
0.78 |
0.27 |
-0.61 |
-0.01 |
-0.01 |
0.35 |
0.4 |
0.49 |
-0.8 |
0.86 |
-0.37 |
0.21 |
1.25 |
At4g28660 |
253790_at |
|
photosystem II reaction centre W (PsbW) family protein |
2 |
|
photosynthesis |
|
Photosynthesis |
|
|
|
|
1.04 |
3.51 |
| At5g67030 |
0.506 |
ABA1 |
Encodes a single copy zeaxanthin epoxidase gene that functions in first step of the biosynthesis of the abiotic stress hormone abscisic acid (ABA). Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid |
-0.08 |
0.12 |
0.11 |
-0.01 |
-0.03 |
-0.08 |
0.06 |
-0.12 |
-0.18 |
0.07 |
0.08 |
0.06 |
0.55 |
1.66 |
-0.21 |
-0.2 |
-0.36 |
-0.26 |
-0.13 |
0.2 |
-0.16 |
-0.04 |
-0.01 |
0.48 |
0.99 |
-0.17 |
-0.18 |
-0.9 |
-0.17 |
-0.18 |
-0.9 |
-0.16 |
-0.31 |
-1.09 |
-0.07 |
-0.08 |
-0.07 |
-0.41 |
0.25 |
-0.03 |
0.2 |
0.27 |
0.18 |
0.15 |
0.39 |
0.4 |
0.04 |
0.19 |
0.65 |
0.18 |
0.24 |
0.5 |
0.2 |
0.07 |
-0.5 |
0.15 |
-0.21 |
0.31 |
0.09 |
0.19 |
0.2 |
0.32 |
-0.81 |
0.82 |
0.49 |
0.81 |
-0.44 |
0.18 |
0.23 |
0.17 |
-0.72 |
0.13 |
0.13 |
0.28 |
0.28 |
0.23 |
0.01 |
-0.07 |
-0.71 |
-1.49 |
-0.2 |
-0.52 |
-0.33 |
0.17 |
0.08 |
0.13 |
0.1 |
0.21 |
0.04 |
-0.73 |
-1.13 |
-0.01 |
0.64 |
0.06 |
-0.76 |
0.05 |
-0.24 |
0.33 |
0.3 |
0.6 |
-0.81 |
0.04 |
-0.52 |
0.48 |
0.26 |
At5g67030 |
247025_at |
ABA1 |
Encodes a single copy zeaxanthin epoxidase gene that functions in first step of the biosynthesis of the abiotic stress hormone abscisic acid (ABA). Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid |
8 |
xanthophyll biosynthesis | response to water deprivation | response to osmotic stress | zeaxanthin epoxidase activity | abscisic acid biosynthesis | sugar mediated signaling |
|
carotenoid biosynthesis | xanthophyll cycle |
|
Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Carotenoid biosynthesis |
|
Carotenoid and abscisic acid metabolism | carotenid biosynthesis |
|
1.44 |
3.15 |
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