Co-Expression Analysis of: CYP71B12 and CYP71B13 (At5g25130 and At5g25140) Institut de Biologie Moléculaire des Plantes


































































































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Hormones etc. Data Set save / view heatmap as: OpenOffice Table annotation details for co-expressed genes can be found to the right of the heatmap


















































































































MS Excel TableS Excel Table


















































































































save / view all data as: Tab delimited Table For further information on the experiments please go to the Genevestigator database using the experiment-ID given in brackets.















































































































shown are a maximum of 50 genes with r>0.5 (If more co-expressed genes with r>0.5 exist, they can be saved as Tab delimited data only) magnitude of change [log2(treatment/control)]    0   0.3   0.6   0.9  1.2   1.5   1.8   2.1   2.4   2.7   >2.99 












































































































greater than zero                                                         












































































































less than zero                                                         












































































































Locus r-value Name Description ethylene, 3h, petiole (13) mock, 30min, seedling (110) IAA, 30min, seedling (110) IAA, 1h, seedling (110) IAA, 3h, seedling (110) zeatin, 30min, seedling (110) zeatin, 1h, seedling (110) zeatin, 3h, seedling (110) GA3, 30min, seedling (110) GA3, 1h, seedling (110) GA3, 3h, seedling (110) ABA, 30min, seedling (110) ABA, 1h, seedling (110) ABA, 3h, seedling (110) MJ, 30min, seedling (110) MJ, 1h, seedling (110) MJ, 3h, seedling (110) ACC, 30min, seedling (110) ACC, 1h, seedling (110) ACC, 3h, seedling (110) BL, 30min, seedling (110) BL, 1h, seedling (110) BL, 3h, seedling (110) ABA, 3 uM, imbided seed (116) ABA, 30 uM, imbided seed (116) GA, 3h, imbibed seed (119) GA, 6h, imbibed seed (119) GA, 9h, imbibed seed (119) GA, 3h, imbibed seed (134) GA, 6h, imbibed seed (134) GA, 9h, imbibed seed (134) GA, 30min, whole plant (99) GA, 60min, whole plant (99) GA, 3h, whole plant (99) IAA, 0.1uM, 1h, seedling (144) IAA, 0.1uM, 3h, seedling (144) IAA, 1uM, 1h, seedling (144) IAA, 1uM, 3h, seedling (144) ppi, 3h, seedling (113) ppi, 12h, seedling (113) uni, 3h, seedling (113) uni, 12h, seedling (113) brz220, 3h, seedling (113) brz220, 12h, seedling (113) brz91, 3h, seedling (113) brz91, 12h, seedling (113) pac, 3h, seedling (113) pac, 12h, seedling (113) px, 3h, seedling (113) px, 12h, seedling (113) pno8, 3h, seedling (113) pno8, 12h, seedling (113) ibup, 3h, seedling (113) B9, 3h, seedling (113) AgNO3, 3h, seedling (113) AVG, 3h, seedling (113) Sal, 3h, seedling (113) MG132, 3h, seedling (113) 246T, 3h, seedling (113) PCIB, 3h, seedling (113) TIBA, 3h, seedling (113) NPA, 3h, seedling (113) CHX, 3h, seedling (113) Colm, 3h, seedling (113) ColPNO8, 3h, seedling (113) ColBrz, 3h, seedling (113) glucose, 8h, seedling (14) sucrose, 8h, seedling (15) deoxyglucose, 8h_seedling (14) methylglucose, 8h, seedling (14) K depleted, whole rosette (97) K depleted, root (97) Sulfate depleted, 2h, root (112) Sulfate depleted, 4h, root (112) Sulfate depleted, 8h, root (112) Sulfate depleted, 12h, root (112) Sulfate depleted, 24h, root (112) mannitol, 8h, seedling (14) CO2, 1000ppm, guard cell enriched (11) CO2, 1000ppm, mature leaf (11) CO2, high light, whole rosette (95) CO2, medium light, whole rosette (95) CO2, low light, whole rosette (95) CO2, 2h, juvenile leaf (151) CO2, 4h, juvenile leaf (151) CO2, 6h, juvenile leaf (151) CO2, 12h, juvenile leaf (151) CO2, 24h, juvenile leaf (151) CO2, 48h, juvenile leaf (151) dark, 45min, seedling (109) dark, 4h, seedling (109) far red, 45min, seedling (109) far red, 4h, seedling (109) red pulse1, seedling (109) red pulse2, seedling (109) red, 45min, seedling (109) red, 4h, seedling (109) blue, 45min, seedling (109) blue, 4h, seedling (109) UV-A pulse1, seedling (109) UV-A pulse2, seedling (109) UV-AB pulse1, seedling (109) UV-AB pulse2, seedling (109) UV-A, 18h, mature leaf (72) UV-B, 18h, mature leaf (72) Locus Probeset Name Description Annotation score GO.keywords FunCat keywords AraCyc annotations KEGG annotations BioPath annotations AcylLipid category Literature annotations Gene family 90% quantile of DE max. DE
At5g25140 1.000 CYP71B13 cytochrome P450 family protein -0.83 0.26 0.67 0.26 0.26 0.26 0.26 0.26 0.26 0.26 0.26 0.26 0.26 0.26 0.26 0.26 1.06 0.26 0.26 0.26 1.59 0.26 0.26 0.26 0.26 -0.83 0.26 0.26 -0.83 0.26 0.26 0.67 0.26 0.26 -0.13 -0.48 -0.72 -1.25 0.56 -0.7 -0.05 -0.7 -0.4 0.73 -0.17 0.03 0.35 0.95 -0.2 -0.7 -0.46 0.09 -0.8 -1.4 -0.44 -0.31 -1.14 -0.16 -0.57 -0.47 -0.52 -0.63 -1.4 -0.14 -1.4 -1.4 0.26 0.26 0.26 0.26 -0.13 -0.28 -0.19 -0.39 0.05 0.26 -0.2 0.26 0.98 -0.23 0.26 0.26 0.26 0.26 0.26 -0.34 0.26 0.26 0.13 -0.19 -0.44 0.48 -0.06 0.37 0.15 0.34 -0.14 0.18 -0.02 0.4 0.03 0.46 -0.57 1.06 0.52 At5g25140 246949_at (m) CYP71B13 cytochrome P450 family protein 1






cytochrome P450 family 1.80 2.98
At5g25130 1.000 CYP71B12 cytochrome P450 family protein -0.83 0.26 0.67 0.26 0.26 0.26 0.26 0.26 0.26 0.26 0.26 0.26 0.26 0.26 0.26 0.26 1.06 0.26 0.26 0.26 1.59 0.26 0.26 0.26 0.26 -0.83 0.26 0.26 -0.83 0.26 0.26 0.67 0.26 0.26 -0.13 -0.48 -0.72 -1.25 0.56 -0.7 -0.05 -0.7 -0.4 0.73 -0.17 0.03 0.35 0.95 -0.2 -0.7 -0.46 0.09 -0.8 -1.4 -0.44 -0.31 -1.14 -0.16 -0.57 -0.47 -0.52 -0.63 -1.4 -0.14 -1.4 -1.4 0.26 0.26 0.26 0.26 -0.13 -0.28 -0.19 -0.39 0.05 0.26 -0.2 0.26 0.98 -0.23 0.26 0.26 0.26 0.26 0.26 -0.34 0.26 0.26 0.13 -0.19 -0.44 0.48 -0.06 0.37 0.15 0.34 -0.14 0.18 -0.02 0.4 0.03 0.46 -0.57 1.06 0.52 At5g25130 246949_at (m) CYP71B12 cytochrome P450 family protein 1






cytochrome P450 family 1.80 2.98
At1g62940 0.590
4-coumarate--CoA ligase family protein 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 -0.32 0.3 0.1 -0.44 0.1 -0.44 0.1 -0.44 0.1 0.36 0.1 -0.44 0.1 -0.44 0.1 -0.44 -0.44 -0.44 -0.44 -0.44 -0.44 -0.44 -0.44 -0.44 -0.44 -0.44 -0.44 -0.44 -0.44 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 0.1 At1g62940 261096_at
4-coumarate--CoA ligase family protein 2

lignin biosynthesis | flavonoid biosynthesis Stilbene, coumarine and lignin biosynthesis Phenylpropanoid Metabolism | core phenylpropanoid metabolism
Phenylpropanoid pathway Acyl activating enzymes , CoA ligases, clade IV, 4-coumarate-CoA ligase 0.53 0.80
At1g48660 0.552
similar to auxin-responsive GH3 product (Glycine max) 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.36 0.42 0.03 -0.17 -0.41 0.03 -0.17 -0.41 0.31 0.31 0.31 0.31 0.31 0.31 -0.11 -0.05 1.62 -0.06 0.31 -0.6 2.35 -0.15 2.83 -0.04 2.45 -2.6 0.31 -2.6 0.31 -2.6 -2.6 -0.54 0.15 -2.6 -0.78 -0.31 -2.6 -2.6 -0.3 -2.6 -2.6 -2.6 -2.6 0.31 0.77 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 At1g48660 256139_at
similar to auxin-responsive GH3 product (Glycine max) 4






Acyl activating enzymes , CoA ligases, clade III, putative hormone adenylase 3.01 5.43
At3g46700 0.546
UDP-glucoronosyl/UDP-glucosyl transferase family protein 0.22 0.22 0.22 0.22 0.22 0.22 0.22 2.29 0.22 0.22 0.22 0.22 0.22 0.22 0.22 0.22 2.34 0.22 0.22 0.22 0.22 0.22 0.22 0.22 0.22 0.22 0.22 0.22 0.22 0.22 0.22 1.07 1.08 0.15 -0.63 -0.56 -0.78 -1.83 -0.95 0.84 -0.88 0.56 -0.02 1.02 -1.15 0.61 -0.16 0.87 0.43 1.23 -2.13 0.51 -0.77 -1.53 -2.13 0.33 -2.13 -2.13 -0.12 0.55 -2.13 -0.19 -0.69 -2.13 -2.13 -2.13 0.11 1.13 -0.18 -0.01 0.22 0.22 0.06 -0.07 -0.21 0.24 -0.01 0.23 0.22 0.22 0.22 0.22 0.22 0.22 0.22 0.22 0.22 0.22 0.22 0.06 -0.15 0.2 0.45 0.15 0.17 0.4 0.25 0.35 0.13 0.34 0.14 0.41 -0.36 0.22 0.22 At3g46700 252488_at
UDP-glucoronosyl/UDP-glucosyl transferase family protein 1
biosynthesis of secondary products derived from primary amino acids | biosynthesis of glycosinolates and derivatives




Glycosyl transferase, Family 1 3.19 4.47
At1g77530 0.537
O-methyltransferase family 2 protein, similar to caffeic acid 3-O-methyltransferase (Clarkia breweri; Populus tremuloides) 0.17 0.17 1.73 -0.6 -1.89 2.22 1.42 1.12 1.37 -0.6 0.01 1.2 0.2 -1.23 0.6 1.35 1.25 2.06 0.5 -0.79 2.37 0.23 -0.9 0.17 0.17 0.05 0.17 0.17 0.05 0.17 0.17 0.28 0.31 -0.51 -0.16 -0.41 -0.41 -0.83 -1.18 -1.09 0.03 -1.09 -0.37 -0.42 -1.18 0.27 -0.24 0.06 -1.18 -1.09 -1.18 0.46 -0.01 -1.18 -1.18 0.02 -0.85 -1.18 -0.35 -1.18 -1.18 -0.69 -1.18 -1.18 -1.18 -1.18 1.33 0.17 1.63 1.48 0.27 0.41 0.26 -0.39 0.41 0.28 -0.19 0.17 0.17 0.17 0.17 0.17 0.17 0.17 -0.49 0.17 0.17 0.17 0.17 0.67 -0.71 0.6 -0.71 0.17 0.28 1.05 0.05 1.18 -0.71 0.17 0.54 0.17 -0.71 0.17 0.17 At1g77530 259758_s_at
O-methyltransferase family 2 protein, similar to caffeic acid 3-O-methyltransferase (Clarkia breweri; Populus tremuloides) 2



Phenylpropanoid Metabolism | core phenylpropanoid metabolism
Phenylpropanoid pathway Methyltransferase, COMT like 2.65 4.27
At4g36810 0.535 GGPS1 encodes a chloroplast-targeted geranylgeranyl pyrophosphate synthase 0.19 0.11 0.19 -0.12 0.03 0.13 -0.11 0.18 0.26 0.05 0.28 0.37 0.12 -0.31 0.56 0.15 -0.05 0.48 0.37 0.19 0.51 0.1 -0.01 0.03 -0.35 0.02 0.67 0.26 0.02 0.67 0.26 -0.12 -0.02 -0.13 0.03 -0.01 0.23 -0.18 -0.13 0.18 -0.18 -0.26 -0.21 0.04 -0.09 0.11 -0.2 0.01 -0.41 -0.2 -0.14 0.03 -0.34 -0.31 -0.49 -0.43 -0.61 -0.15 -0.03 -0.18 -0.48 -0.22 -2.02 -0.43 -0.56 -0.33 0.05 -0.11 -0.11 -0.02 -0.31 -0.14 0.3 0.1 0.01 0.01 -0.01 -0.21 0.52 -0.48 0.5 0.15 0.06 -0.14 -0.18 0.26 0.45 0.14 -0.11 0.23 -0.44 0.09 0.15 0.21 0.19 0.09 0.09 0.06 0.08 -0.18 0.09 -0.01 -0.01 0.61 0.96 At4g36810 246198_at GGPS1 encodes a chloroplast-targeted geranylgeranyl pyrophosphate synthase 10 farnesyltranstransferase activity biosynthesis of derivatives of homoisopentenyl pyrophosphate | biogenesis of chloroplast
Biosynthesis of steroids | Terpenoid biosynthesis Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Biosynthesis of prenyl diphosphates
prenyl diphosphate (GPP,FPP, GGPP) biosynthesis
0.99 2.99
At3g21760 0.526
UDP-glucoronosyl/UDP-glucosyl transferase family protein -0.55 0.25 0.04 0.02 0.11 0.01 0.25 0.27 0.21 0.17 -0.12 0.11 0.36 1.59 0.19 0.13 0.03 0.13 0.26 0.03 0.11 -0.12 0.22 0.94 0.53 0.34 0.19 1.09 0.34 0.19 1.09 0.21 0.11 0.69 0.31 0.23 -0.16 -0.62 -0.19 -0.22 -0.28 -0.02 -0.64 -0.2 -0.19 -0.37 -0.45 -0.11 -0.07 -0.08 -0.12 0.15 -0.44 -0.36 -1.13 -0.57 -0.95 -0.38 -0.02 -0.96 0.12 -0.8 -2.19 -0.85 -1.12 -0.98 0.04 0.28 0.02 0.19 -0.01 0.25 0.25 0.25 0.25 0.25 0.25 -0.04 0.44 -0.57 0.32 0.88 -0.02 0.42 0.03 0.56 0.3 0.33 0.13 -0.74 -1.86 0.04 0.93 -0.02 -0.51 -0.2 -0.03 -0.06 0.6 0.45 -0.68 0.62 -0.59 0.66 0.83 At3g21760 257954_at
UDP-glucoronosyl/UDP-glucosyl transferase family protein 1






Glycosyl transferase, Family 1 1.83 3.78
At2g21610 0.520
pectinesterase family protein 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 -0.32 -0.35 0.09 -0.35 0.09 -0.35 0.09 -0.35 0.09 -0.35 0.09 -0.35 0.09 -0.35 0.09 -0.35 -0.35 -0.35 -0.35 -0.35 -0.35 -0.35 -0.35 -0.35 -0.35 -0.35 -0.35 -0.35 -0.35 0.09 0.09 0.09 0.09 0.09 0.09 -0.17 -0.04 0.09 0.71 -0.25 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 0.09 At2g21610 263543_at
pectinesterase family protein 2



Cell Wall Carbohydrate Metabolism | pectin metabolism


0.45 1.06
At3g47170 0.511
transferase family protein, low similarity to 10-deacetylbaccatin III-10-O-acetyl transferase Taxus cuspidata 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.72 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 -0.28 -0.52 0.13 -0.52 0.13 -0.52 0.13 -0.52 0.13 -0.52 0.13 -0.52 0.13 -0.52 0.13 -0.52 -0.52 -0.52 -0.52 -0.52 -0.52 -0.52 -0.52 -0.52 -0.52 -0.52 -0.52 -0.52 -0.52 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 0.13 At3g47170 252456_at
transferase family protein, low similarity to 10-deacetylbaccatin III-10-O-acetyl transferase Taxus cuspidata 1






acyltransferase, BAHD family, group A, taxol-like 0.65 1.24
At1g13710 0.509 CYP78A5 cytochrome P450 family protein 0.07 0.07 0.07 0.07 0.07 0.07 0.39 0.31 0.07 0.07 0.76 0.07 0.07 0.07 0.07 0.07 0.07 0.07 0.07 0.07 0.07 0.07 0.07 0.04 -0.03 -0.37 0.28 0.7 -0.37 0.28 0.7 0.07 0.07 0.07 0.07 0.07 0.07 -0.34 0.49 0.74 0.42 0.07 0.1 0.07 -0.65 0.07 -0.03 0.07 0.07 0.07 -0.65 0.07 -0.65 -0.65 -0.65 -0.65 -0.04 -0.65 -0.15 -0.65 -0.65 -0.65 -0.65 -0.65 -0.65 -0.65 0.07 0.18 0.07 0.07 0.07 -0.17 0.07 0.07 -0.21 0.22 0.47 0.07 0.07 0.07 0.07 0.07 0.07 0.07 0.07 0.07 0.07 0.07 0.07 0.07 0.07 0.07 0.07 0.07 0.07 0.07 0.07 0.07 0.07 0.07 0.07 0.07 0.07 0.07 0.07 At1g13710 256099_at CYP78A5 cytochrome P450 family protein 1






cytochrome P450 family 1.11 1.41
At2g24710 0.502 ATGLR2.3 member of Putative ligand-gated ion channel subunit family 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.1 -1.4 -1.79 -1.4 -1.79 -1.4 1.09 -1.4 0.99 -1.4 -1.79 -1.4 -1.79 -1.4 -1.79 -1.4 -1.4 -1.4 -1.4 -1.4 -1.4 -1.4 -1.4 -1.4 -1.4 -1.4 -1.4 -1.4 -1.4 0.51 0.51 0.51 0.51 0.51 -0.21 0.51 0.51 0.51 0.51 -1.67 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 0.51 At2g24710 263316_s_at ATGLR2.3 member of Putative ligand-gated ion channel subunit family 2 calcium ion homeostasis

Ligand-Receptor Interaction | Ion channels



2.13 2.88
At1g28580 0.501
GDSL-motif lipase family protein 0.07 0.09 0 -0.25 -0.34 0.22 0.26 0.35 0.15 -0.04 0.15 0.13 -0.01 -0.25 0.18 0.21 0.59 0.11 0.1 0.17 0.03 0.02 -0.24 -0.13 -0.15 -0.14 0.39 0.84 -0.14 0.39 0.84 0.17 0.2 -0.15 -0.28 -0.18 -0.14 -0.4 -0.15 0.15 -0.15 0.17 -0.08 0.25 0.11 0.24 0.14 0.23 0.04 0.02 -0.17 0.05 -0.38 -0.05 -0.3 -0.18 -0.31 -0.31 -0.35 -0.04 -0.68 -0.03 -1.37 -0.23 -0.4 -0.15 0.11 -0.34 0 0 0.03 0.03 0.03 0 -0.15 0.08 0.01 0.21 0 -0.18 -0.21 0.03 0.27 -0.05 0.04 -0.09 -0.01 0.03 0.08 0.07 -0.3 0.09 0.16 0.02 0.03 0.2 0.09 -0.02 0.11 -0.15 0.14 0.01 0.09 0.28 0.32 At1g28580 262749_at
GDSL-motif lipase family protein 2

triacylglycerol degradation




0.69 2.21




























































































































page created by Vincent Sauveplane 05/04/06