Co-Expression Analysis of: CYP71B19 / CYP71B20 (At3g26170 / At3g26180) Institut de Biologie Moléculaire des Plantes


































































































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Hormones etc. Data Set save / view heatmap as: OpenOffice Table annotation details for co-expressed genes can be found to the right of the heatmap


















































































































MS Excel Table


















































































































save / view all data as: Tab delimited Table For further information on the experiments please go to the Genevestigator database using the experiment-ID given in brackets.















































































































shown are a maximum of 50 genes with r>0.5 (If more co-expressed genes with r>0.5 exist, they can be saved as Tab delimited data only) magnitude of change [log2(treatment/control)]    0   0.3   0.6   0.9  1.2   1.5   1.8   2.1   2.4   2.7   >2.99 












































































































greater than zero                                                         












































































































less than zero                                                         












































































































Locus r-value Name Description ethylene, 3h, petiole (13) mock, 30min, seedling (110) IAA, 30min, seedling (110) IAA, 1h, seedling (110) IAA, 3h, seedling (110) zeatin, 30min, seedling (110) zeatin, 1h, seedling (110) zeatin, 3h, seedling (110) GA3, 30min, seedling (110) GA3, 1h, seedling (110) GA3, 3h, seedling (110) ABA, 30min, seedling (110) ABA, 1h, seedling (110) ABA, 3h, seedling (110) MJ, 30min, seedling (110) MJ, 1h, seedling (110) MJ, 3h, seedling (110) ACC, 30min, seedling (110) ACC, 1h, seedling (110) ACC, 3h, seedling (110) BL, 30min, seedling (110) BL, 1h, seedling (110) BL, 3h, seedling (110) ABA, 3 uM, imbided seed (116) ABA, 30 uM, imbided seed (116) GA, 3h, imbibed seed (119) GA, 6h, imbibed seed (119) GA, 9h, imbibed seed (119) GA, 3h, imbibed seed (134) GA, 6h, imbibed seed (134) GA, 9h, imbibed seed (134) GA, 30min, whole plant (99) GA, 60min, whole plant (99) GA, 3h, whole plant (99) IAA, 0.1uM, 1h, seedling (144) IAA, 0.1uM, 3h, seedling (144) IAA, 1uM, 1h, seedling (144) IAA, 1uM, 3h, seedling (144) ppi, 3h, seedling (113) ppi, 12h, seedling (113) uni, 3h, seedling (113) uni, 12h, seedling (113) brz220, 3h, seedling (113) brz220, 12h, seedling (113) brz91, 3h, seedling (113) brz91, 12h, seedling (113) pac, 3h, seedling (113) pac, 12h, seedling (113) px, 3h, seedling (113) px, 12h, seedling (113) pno8, 3h, seedling (113) pno8, 12h, seedling (113) ibup, 3h, seedling (113) B9, 3h, seedling (113) AgNO3, 3h, seedling (113) AVG, 3h, seedling (113) Sal, 3h, seedling (113) MG132, 3h, seedling (113) 246T, 3h, seedling (113) PCIB, 3h, seedling (113) TIBA, 3h, seedling (113) NPA, 3h, seedling (113) CHX, 3h, seedling (113) Colm, 3h, seedling (113) ColPNO8, 3h, seedling (113) ColBrz, 3h, seedling (113) glucose, 8h, seedling (14) sucrose, 8h, seedling (15) deoxyglucose, 8h_seedling (14) methylglucose, 8h, seedling (14) K depleted, whole rosette (97) K depleted, root (97) Sulfate depleted, 2h, root (112) Sulfate depleted, 4h, root (112) Sulfate depleted, 8h, root (112) Sulfate depleted, 12h, root (112) Sulfate depleted, 24h, root (112) mannitol, 8h, seedling (14) CO2, 1000ppm, guard cell enriched (11) CO2, 1000ppm, mature leaf (11) CO2, high light, whole rosette (95) CO2, medium light, whole rosette (95) CO2, low light, whole rosette (95) CO2, 2h, juvenile leaf (151) CO2, 4h, juvenile leaf (151) CO2, 6h, juvenile leaf (151) CO2, 12h, juvenile leaf (151) CO2, 24h, juvenile leaf (151) CO2, 48h, juvenile leaf (151) dark, 45min, seedling (109) dark, 4h, seedling (109) far red, 45min, seedling (109) far red, 4h, seedling (109) red pulse1, seedling (109) red pulse2, seedling (109) red, 45min, seedling (109) red, 4h, seedling (109) blue, 45min, seedling (109) blue, 4h, seedling (109) UV-A pulse1, seedling (109) UV-A pulse2, seedling (109) UV-AB pulse1, seedling (109) UV-AB pulse2, seedling (109) UV-A, 18h, mature leaf (72) UV-B, 18h, mature leaf (72) Locus Probeset Name Description Annotation score GO.keywords FunCat keywords AraCyc annotations KEGG annotations BioPath annotations AcylLipid category Literature annotations Gene family 90% quantile of DE max. DE
At3g26180 1.000 CYP71B20 cytochrome P450 family protein -0.64 0.01 -0.13 0.06 0.01 0.21 -0.05 -0.6 0.14 0.35 0.22 0.21 -0.11 -0.07 0.08 0 -0.85 -0.06 -0.1 -0.15 0.26 0.31 -0.56 -0.16 -0.37 -0.28 0.28 0.54 -0.28 0.28 0.54 -0.07 -0.07 -0.19 -0.28 -0.3 -0.47 -0.33 -0.27 0.32 0.02 0.84 -0.39 0.8 -0.06 0.81 -0.2 0.56 0.33 0.83 0 0.82 -0.32 -0.28 0.37 -0.33 0.36 -0.47 -0.16 -0.16 -0.6 -0.43 -1.43 0.36 0.36 0.14 -0.66 -0.89 0.17 0 0.1 0.01 0.01 0.01 0.01 0.01 0.01 0.13 -1.1 -1.03 0.12 0.2 -0.05 -0.05 -0.06 0.11 -0.16 -0.19 -0.61 0.05 0.82 0.17 0.21 0.18 0.86 0.05 0.51 -0.01 -0.27 0.32 0.19 0.87 0.12 0.19 0.44 At3g26180 257634_s_at (m) CYP71B20 cytochrome P450 family protein 1






cytochrome P450 family 1.47 2.30
At3g26170 1.000 CYP71B19 cytochrome P450 family protein -0.64 0.01 -0.13 0.06 0.01 0.21 -0.05 -0.6 0.14 0.35 0.22 0.21 -0.11 -0.07 0.08 0 -0.85 -0.06 -0.1 -0.15 0.26 0.31 -0.56 -0.16 -0.37 -0.28 0.28 0.54 -0.28 0.28 0.54 -0.07 -0.07 -0.19 -0.28 -0.3 -0.47 -0.33 -0.27 0.32 0.02 0.84 -0.39 0.8 -0.06 0.81 -0.2 0.56 0.33 0.83 0 0.82 -0.32 -0.28 0.37 -0.33 0.36 -0.47 -0.16 -0.16 -0.6 -0.43 -1.43 0.36 0.36 0.14 -0.66 -0.89 0.17 0 0.1 0.01 0.01 0.01 0.01 0.01 0.01 0.13 -1.1 -1.03 0.12 0.2 -0.05 -0.05 -0.06 0.11 -0.16 -0.19 -0.61 0.05 0.82 0.17 0.21 0.18 0.86 0.05 0.51 -0.01 -0.27 0.32 0.19 0.87 0.12 0.19 0.44 At3g26170 257634_s_at (m) CYP71B19 cytochrome P450 family protein 1






cytochrome P450 family 1.47 2.30
At5g16340 0.583
similar to AMP-binding protein (Brassica napus) 0.35 -0.03 -0.14 -0.25 0.23 -0.02 -0.5 -0.14 0.19 0.2 0.25 0.31 0.07 0.74 0.48 0.1 0.39 0.32 0.11 0.22 0.41 -0.01 -0.42 0.1 0.06 -0.18 0.28 -0.04 -0.18 0.28 -0.04 0.05 0.36 -0.57 -0.27 -0.37 -0.27 -0.3 -0.48 0.06 -0.28 0.28 -0.68 0.22 -0.27 0.5 -0.18 -0.06 -0.5 0.1 -0.4 0.37 -0.56 -0.82 0.92 -0.36 0.04 -0.8 -0.41 -0.21 0.02 -0.42 -1.41 0.21 0.83 0.45 -0.73 -0.99 0.72 0.69 0.56 0.71 0.19 0 -0.14 0.12 -0.09 0.86 -0.86 -0.67 0.61 -0.17 -0.26 -0.16 -0.02 0.35 -0.15 0.09 -0.14 0.01 0.61 -0.01 -0.09 -0.02 0.53 0.05 0.34 -0.28 -0.21 0.04 0.43 -0.22 0.1 0.11 0.16 At5g16340 250114_s_at
similar to AMP-binding protein (Brassica napus) 2
lipid, fatty acid and isoprenoid metabolism



Phenylpropanoid pathway Acyl activating enzymes , CoA ligases, clade VI 1.43 2.33
At3g51840 0.581 ACX4 encodes a short-chain acyl-CoA oxidase, which catalyses the first step of peroxisomal fatty acid beta-oxidation during early, post-germinative growth in oilseed species. Null mutants virtually lack short-chain acyl-CoA and is resistant to 2,4-dichlorophen -0.17 0.02 0.03 -0.04 -0.12 0.16 -0.2 -0.25 0.11 0.03 -0.02 0.04 -0.14 0.39 0.03 -0.2 0 0.01 -0.2 -0.1 -0.13 -0.22 -0.14 -0.08 -0.17 0.14 0.26 0.08 0.14 0.26 0.08 -0.13 -0.12 -0.67 -0.01 -0.16 0.04 -0.24 -0.03 0.44 0.14 0.47 -0.1 0.23 0.08 0.43 0.21 0.28 0.22 0.12 -0.14 0.26 -0.48 -0.04 0.03 -0.1 -0.13 -0.26 -0.07 -0.05 -0.26 -0.01 -0.94 0.23 0.04 0.45 -0.42 -0.7 0.51 0.49 -0.23 0.25 -0.04 0.19 -0.02 -0.02 -0.15 0.69 -0.21 -0.08 0.32 -0.24 -0.09 -0.01 -0.07 -0.06 -0.07 -0.09 -0.02 0.07 0.36 0.1 0.01 0.07 0.24 0.08 0.16 0.06 -0.13 0.03 0.1 -0.1 -0.38 0.07 -0.04 At3g51840 246304_at ACX4 encodes a short-chain acyl-CoA oxidase, which catalyses the first step of peroxisomal fatty acid beta-oxidation during early, post-germinative growth in oilseed species. Null mutants virtually lack short-chain acyl-CoA and is resistant to 2,4-dichlorophen 10 acyl-CoA oxidase activity | fatty acid beta-oxidation | embryonic development (sensu Magnoliophyta) lipid, fatty acid and isoprenoid metabolism
Fatty acid metabolism | Lysine degradation | Tryptophan metabolism | Benzoate degradation via CoA ligation Gluconeogenesis from lipids in seeds | fatty acid beta oxidation complex Degradation of storage lipids and straight fatty acids

0.79 1.63
At1g21400 0.548
2-oxoisovalerate dehydrogenase, putative / 3-methyl-2-oxobutanoate dehydrogenase, putative / branched-chain alpha-keto acid dehydrogenase E1 alpha subunit, putative 0.51 -0.13 -0.2 -0.33 0.41 -0.5 -0.18 -0.47 -0.27 0.12 0.02 -0.2 1.18 3.2 -0.52 -0.25 -0.14 0.18 0.32 0.21 0.07 -0.27 -1.73 -0.13 0.11 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.17 0.41 0.17 -0.55 -0.26 -0.34 0.06 -0.05 1.3 -0.76 1.84 -0.45 0.98 -0.18 1 -0.81 0.87 -0.42 0.54 -0.75 0.79 -0.62 -0.59 1.04 -1.58 -0.02 -0.87 -1.25 -0.83 0.25 -0.42 -1.25 1.33 2.25 1.4 -1.68 -2.38 0.93 0.94 0.72 0.81 0.23 0.53 -0.13 -0.13 -0.13 1.4 -1.38 -1.19 -1.07 0.17 -0.53 -0.4 -0.51 -0.4 -0.73 -0.57 -0.11 0.07 1.67 0.23 -0.36 0.19 1.12 0.11 0.21 -0.28 -0.51 -0.13 1.07 -0.62 0.13 0 0.47 At1g21400 260900_s_at (m)
2-oxoisovalerate dehydrogenase, putative / 3-methyl-2-oxobutanoate dehydrogenase, putative / branched-chain alpha-keto acid dehydrogenase E1 alpha subunit, putative 4
C-compound and carbohydrate metabolism | tricarboxylic-acid pathway (citrate cycle, Krebs cycle, TCA cycle)
Valine, leucine and isoleucine degradation
metabolism of acyl-lipids in mitochondria

2.64 5.57
At5g34780 0.548
dehydrogenase E1 component family protein, similar to 2-oxoisovalerate dehydrogenase alpha subunit (Mus musculus) 0.51 -0.13 -0.2 -0.33 0.41 -0.5 -0.18 -0.47 -0.27 0.12 0.02 -0.2 1.18 3.2 -0.52 -0.25 -0.14 0.18 0.32 0.21 0.07 -0.27 -1.73 -0.13 0.11 -0.13 -0.13 -0.13 -0.13 -0.13 -0.13 -0.17 0.41 0.17 -0.55 -0.26 -0.34 0.06 -0.05 1.3 -0.76 1.84 -0.45 0.98 -0.18 1 -0.81 0.87 -0.42 0.54 -0.75 0.79 -0.62 -0.59 1.04 -1.58 -0.02 -0.87 -1.25 -0.83 0.25 -0.42 -1.25 1.33 2.25 1.4 -1.68 -2.38 0.93 0.94 0.72 0.81 0.23 0.53 -0.13 -0.13 -0.13 1.4 -1.38 -1.19 -1.07 0.17 -0.53 -0.4 -0.51 -0.4 -0.73 -0.57 -0.11 0.07 1.67 0.23 -0.36 0.19 1.12 0.11 0.21 -0.28 -0.51 -0.13 1.07 -0.62 0.13 0 0.47 At5g34780 260900_s_at (m)
dehydrogenase E1 component family protein, similar to 2-oxoisovalerate dehydrogenase alpha subunit (Mus musculus) 2
amino acid metabolism
Valine, leucine and isoleucine degradation



2.64 5.57
At3g45300 0.532 IVD isovaleryl-CoA-dehydrogenase 0.09 -0.06 0.26 -0.14 0.54 0.23 -0.24 -0.25 0.05 -0.11 -0.28 0.05 -0.24 1.52 0.07 -0.28 0.06 -0.13 -0.27 0.2 -0.14 -0.38 -0.45 -0.21 -0.16 -0.04 -0.22 -0.22 -0.04 -0.22 -0.22 -0.27 -0.15 -0.65 -0.13 -0.25 -0.33 -0.17 -0.23 0.76 -0.3 0.82 -0.4 0.48 -0.13 0.75 -0.17 0.55 0.45 0.2 0.42 0.35 -0.23 -0.52 0.45 -0.56 0.17 -0.94 -0.04 0.01 0.17 -0.43 -0.98 0.15 0.97 0.3 -0.7 -0.99 0.93 0.96 -0.25 0.77 -0.07 0.28 -0.01 -0.13 -0.04 1.21 -0.53 -0.61 -0.06 -0.06 -0.16 -0.05 -0.06 -0.14 -0.05 -0.06 -0.06 0.07 0.66 0.09 -0.13 0.14 0.38 0.12 0.08 -0.18 -0.28 0 0.37 -0.28 -0.44 -0.12 0.54 At3g45300 252570_at IVD isovaleryl-CoA-dehydrogenase 10 leucine catabolism amino acid metabolism leucine degradation II | leucine degradation I Valine, leucine and isoleucine degradation
metabolism of acyl-lipids in mitochondria

1.41 2.52
At4g15530 0.526
pyruvate phosphate dikinase family protein 0.28 -0.14 -0.36 -0.41 0.24 -0.36 -0.48 -0.89 -0.14 0.04 -0.08 -0.33 -0.41 1.64 -0.32 -0.12 0.15 -0.63 -0.16 0.16 -0.69 0.28 -0.4 -0.28 -0.23 0.22 0.25 0.42 0.22 0.25 0.42 0.45 0.84 0.16 -0.13 -0.12 -0.56 -0.36 -0.02 1.17 0.06 1.32 -0.22 1.4 0.05 1.37 -0.28 0.94 -0.25 0.79 0.12 1.12 -0.34 -1.19 1.75 -1.21 0.34 -0.44 -0.4 -2.4 0.56 -0.4 -0.11 -0.03 1.57 0.01 -1 -0.84 0.38 0.59 0.12 -0.14 -0.14 -0.14 -0.14 -0.14 -0.14 0.87 -1.02 -1.37 -0.14 -0.14 -0.14 -0.14 -0.14 -0.19 -0.14 -0.14 -0.14 -0.14 0.61 -0.04 0.05 0.01 0.18 -0.09 0.01 -0.07 -0.04 -0.08 0.17 -0.45 -0.22 -0.2 1 At4g15530 245528_at
pyruvate phosphate dikinase family protein 2
glycolysis and gluconeogenesis | photosynthesis | energy conversion and regeneration gluconeogenesis | glyceraldehyde 3-phosphate degradation | acetyl-CoA assimilation Pyruvate metabolism | Carbon fixation Intermediary Carbon Metabolism


2.27 4.15
At1g30270 0.520 CIPK23 CBL-interacting protein kinase 23 0.21 0.07 -0.02 0.12 -0.08 0.11 0.03 -0.34 0.13 0.11 0.31 0.16 0.28 0.26 0.07 0.08 0.01 -0.14 0.25 0.34 0.14 0.12 0.01 0.08 0.2 -0.13 0.96 1.21 -0.13 0.96 1.21 -0.06 0.06 0.1 -0.25 0.13 0.02 -0.22 -0.35 -0.27 -0.48 -0.28 -0.33 -0.03 -0.17 0.12 -0.03 -0.01 0.2 -0.08 -0.08 0.03 -0.61 -0.35 0.59 -0.13 0 -0.32 -0.67 -0.15 -0.61 0 -1.72 -0.07 -0.26 0.06 -0.28 0.31 0.25 0.27 0.28 -0.28 0.11 -0.13 -0.09 0.1 -0.13 0.21 -1.28 -1.22 -0.48 0.07 -0.34 0.04 0.3 0.13 0.2 -0.28 0.07 0.19 0.36 0.09 0.03 0.13 0.34 0.15 0.11 -0.1 0.09 -0.01 0.25 -0.07 0.12 -0.12 0.24 At1g30270 245775_at CIPK23 CBL-interacting protein kinase 23 2


Inositol phosphate metabolism | Nicotinate and nicotinamide metabolism | Benzoate degradation via CoA ligation



0.94 2.93
At5g04040 0.516
patatin-related -0.11 0 -0.16 -0.14 0.23 -0.07 -0.11 -0.12 -0.27 -0.02 0.27 -0.14 0.02 0.46 -0.05 0.16 0.22 -0.3 0.03 -0.06 -0.31 -0.12 0.1 0.07 0.28 0.52 0.26 0.35 0.52 0.26 0.35 -0.04 0.26 -0.17 -0.33 -0.25 -0.16 -0.47 -0.25 0.26 -0.07 0.51 -0.19 -0.13 -0.11 0.47 0.02 0.46 -0.14 0.13 -0.16 0.18 -0.27 -0.28 0.6 0.12 -0.12 -0.38 -0.18 -0.44 -0.11 -0.13 -0.7 0.62 0.68 0.77 -0.44 -0.39 0.32 0.37 -0.65 -0.14 -0.03 0.13 -0.01 -0.05 -0.03 0.65 -0.78 -1.25 -0.09 -0.04 0.1 -0.15 -0.32 0 -0.27 0.18 -0.15 0.22 0.32 0.15 -0.08 0.16 0.23 0.21 0.08 0.04 -0.01 0.04 0.19 -0.02 -0.07 -0.21 -0.4 At5g04040 250877_at
patatin-related 2




Lipid signaling

0.96 2.02




























































































































page created by Vincent Sauveplane 05/11/06