| Co-Expression Analysis of: | CYP71B3 / CYP71B24 (At3g26220 / At3g26230) | Institut de Biologie Moléculaire des Plantes |
|
_____________________________________________ | ____________________________________ | ____________________________________ | ____________________________________ | ____________________________________ | ____________________________________ | ____________________________________ | ____________________________________ | ____________________________________ | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| ________________________ | _____________________________________________ | CYPedia Home | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Hormones etc. Data Set | save / view heatmap as: | OpenOffice Table | annotation details for co-expressed genes can be found to the right of the heatmap | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| MS Excel Table | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| save / view all data as: | Tab delimited Table | For further information on the experiments please go to the Genevestigator database using the experiment-ID given in brackets. | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| shown are a maximum of 50 genes with r>0.5 (If more co-expressed genes with r>0.5 exist, they can be saved as Tab delimited data only) | magnitude of change [log2(treatment/control)] | 0 | 0.3 | 0.6 | 0.9 | 1.2 | 1.5 | 1.8 | 2.1 | 2.4 | 2.7 | >2.99 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| greater than zero | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| less than zero | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Locus | r-value | Name | Description | ethylene, 3h, petiole (13) | mock, 30min, seedling (110) | IAA, 30min, seedling (110) | IAA, 1h, seedling (110) | IAA, 3h, seedling (110) | zeatin, 30min, seedling (110) | zeatin, 1h, seedling (110) | zeatin, 3h, seedling (110) | GA3, 30min, seedling (110) | GA3, 1h, seedling (110) | GA3, 3h, seedling (110) | ABA, 30min, seedling (110) | ABA, 1h, seedling (110) | ABA, 3h, seedling (110) | MJ, 30min, seedling (110) | MJ, 1h, seedling (110) | MJ, 3h, seedling (110) | ACC, 30min, seedling (110) | ACC, 1h, seedling (110) | ACC, 3h, seedling (110) | BL, 30min, seedling (110) | BL, 1h, seedling (110) | BL, 3h, seedling (110) | ABA, 3 uM, imbided seed (116) | ABA, 30 uM, imbided seed (116) | GA, 3h, imbibed seed (119) | GA, 6h, imbibed seed (119) | GA, 9h, imbibed seed (119) | GA, 3h, imbibed seed (134) | GA, 6h, imbibed seed (134) | GA, 9h, imbibed seed (134) | GA, 30min, whole plant (99) | GA, 60min, whole plant (99) | GA, 3h, whole plant (99) | IAA, 0.1uM, 1h, seedling (144) | IAA, 0.1uM, 3h, seedling (144) | IAA, 1uM, 1h, seedling (144) | IAA, 1uM, 3h, seedling (144) | ppi, 3h, seedling (113) | ppi, 12h, seedling (113) | uni, 3h, seedling (113) | uni, 12h, seedling (113) | brz220, 3h, seedling (113) | brz220, 12h, seedling (113) | brz91, 3h, seedling (113) | brz91, 12h, seedling (113) | pac, 3h, seedling (113) | pac, 12h, seedling (113) | px, 3h, seedling (113) | px, 12h, seedling (113) | pno8, 3h, seedling (113) | pno8, 12h, seedling (113) | ibup, 3h, seedling (113) | B9, 3h, seedling (113) | AgNO3, 3h, seedling (113) | AVG, 3h, seedling (113) | Sal, 3h, seedling (113) | MG132, 3h, seedling (113) | 246T, 3h, seedling (113) | PCIB, 3h, seedling (113) | TIBA, 3h, seedling (113) | NPA, 3h, seedling (113) | CHX, 3h, seedling (113) | Colm, 3h, seedling (113) | ColPNO8, 3h, seedling (113) | ColBrz, 3h, seedling (113) | glucose, 8h, seedling (14) | sucrose, 8h, seedling (15) | deoxyglucose, 8h_seedling (14) | methylglucose, 8h, seedling (14) | K depleted, whole rosette (97) | K depleted, root (97) | Sulfate depleted, 2h, root (112) | Sulfate depleted, 4h, root (112) | Sulfate depleted, 8h, root (112) | Sulfate depleted, 12h, root (112) | Sulfate depleted, 24h, root (112) | mannitol, 8h, seedling (14) | CO2, 1000ppm, guard cell enriched (11) | CO2, 1000ppm, mature leaf (11) | CO2, high light, whole rosette (95) | CO2, medium light, whole rosette (95) | CO2, low light, whole rosette (95) | CO2, 2h, juvenile leaf (151) | CO2, 4h, juvenile leaf (151) | CO2, 6h, juvenile leaf (151) | CO2, 12h, juvenile leaf (151) | CO2, 24h, juvenile leaf (151) | CO2, 48h, juvenile leaf (151) | dark, 45min, seedling (109) | dark, 4h, seedling (109) | far red, 45min, seedling (109) | far red, 4h, seedling (109) | red pulse1, seedling (109) | red pulse2, seedling (109) | red, 45min, seedling (109) | red, 4h, seedling (109) | blue, 45min, seedling (109) | blue, 4h, seedling (109) | UV-A pulse1, seedling (109) | UV-A pulse2, seedling (109) | UV-AB pulse1, seedling (109) | UV-AB pulse2, seedling (109) | UV-A, 18h, mature leaf (72) | UV-B, 18h, mature leaf (72) | Locus | Probeset | Name | Description | Annotation score | GO.keywords | FunCat keywords | AraCyc annotations | KEGG annotations | BioPath annotations | AcylLipid category | Literature annotations | Gene family | 90% quantile of DE | max. DE |
| At3g26230 | 1.000 | CYP71B24 | cytochrome P450 family protein | 0.6 | 0.06 | -0.89 | -1.44 | 1.07 | -0.93 | -1.44 | 0.36 | -0.68 | 0.33 | 1.68 | -1.51 | -0.57 | 0.81 | -0.92 | -0.26 | 0.06 | -1.51 | -1.44 | 0.8 | -0.49 | -0.92 | 0.06 | 0.06 | 0.06 | 0.06 | 0.06 | 0.06 | 0.06 | 0.06 | 0.06 | -0.22 | -0.12 | -1.12 | -0.28 | -1.2 | -0.38 | -0.07 | -0.54 | 0.64 | 0.39 | 1.25 | -0.54 | 0.77 | 0.21 | 1.13 | -0.54 | -0.31 | 0.92 | -0.31 | -0.54 | -0.31 | 0.41 | -0.54 | 1.14 | -0.46 | -0.54 | -0.54 | -0.54 | -0.54 | -0.54 | -0.54 | 0.18 | 0.78 | 1.81 | 1.26 | -0.76 | -0.32 | 1.01 | 0.54 | 1.8 | 0.92 | 0.06 | 0.06 | 0.06 | 0.06 | 0.06 | 1.09 | -1.54 | -1.21 | 0.06 | 0.06 | 0.06 | 0.06 | 0.06 | 0.01 | -0.51 | 0.06 | 0.06 | 0.28 | 0.9 | 0.01 | -0.02 | 0.36 | 0.52 | 0.05 | -0.12 | -0.08 | 0.32 | 0.11 | 0.64 | -0.25 | 0.62 | 0.4 | 0.94 | At3g26230 | 257624_at (m) | CYP71B24 | cytochrome P450 family protein | 1 | cytochrome P450 family | 2.54 | 3.35 | |||||||
| At3g26220 | 1.000 | CYP71B3 | cytochrome P450 family protein | 0.6 | 0.06 | -0.89 | -1.44 | 1.07 | -0.93 | -1.44 | 0.36 | -0.68 | 0.33 | 1.68 | -1.51 | -0.57 | 0.81 | -0.92 | -0.26 | 0.06 | -1.51 | -1.44 | 0.8 | -0.49 | -0.92 | 0.06 | 0.06 | 0.06 | 0.06 | 0.06 | 0.06 | 0.06 | 0.06 | 0.06 | -0.22 | -0.12 | -1.12 | -0.28 | -1.2 | -0.38 | -0.07 | -0.54 | 0.64 | 0.39 | 1.25 | -0.54 | 0.77 | 0.21 | 1.13 | -0.54 | -0.31 | 0.92 | -0.31 | -0.54 | -0.31 | 0.41 | -0.54 | 1.14 | -0.46 | -0.54 | -0.54 | -0.54 | -0.54 | -0.54 | -0.54 | 0.18 | 0.78 | 1.81 | 1.26 | -0.76 | -0.32 | 1.01 | 0.54 | 1.8 | 0.92 | 0.06 | 0.06 | 0.06 | 0.06 | 0.06 | 1.09 | -1.54 | -1.21 | 0.06 | 0.06 | 0.06 | 0.06 | 0.06 | 0.01 | -0.51 | 0.06 | 0.06 | 0.28 | 0.9 | 0.01 | -0.02 | 0.36 | 0.52 | 0.05 | -0.12 | -0.08 | 0.32 | 0.11 | 0.64 | -0.25 | 0.62 | 0.4 | 0.94 | At3g26220 | 257624_at (m) | CYP71B3 | cytochrome P450 family protein | 1 | cytochrome P450 family | 2.54 | 3.35 | |||||||
| At1g21400 | 0.541 | 2-oxoisovalerate dehydrogenase, putative / 3-methyl-2-oxobutanoate dehydrogenase, putative / branched-chain alpha-keto acid dehydrogenase E1 alpha subunit, putative | 0.51 | -0.13 | -0.2 | -0.33 | 0.41 | -0.5 | -0.18 | -0.47 | -0.27 | 0.12 | 0.02 | -0.2 | 1.18 | 3.2 | -0.52 | -0.25 | -0.14 | 0.18 | 0.32 | 0.21 | 0.07 | -0.27 | -1.73 | -0.13 | 0.11 | -0.13 | -0.13 | -0.13 | -0.13 | -0.13 | -0.13 | -0.17 | 0.41 | 0.17 | -0.55 | -0.26 | -0.34 | 0.06 | -0.05 | 1.3 | -0.76 | 1.84 | -0.45 | 0.98 | -0.18 | 1 | -0.81 | 0.87 | -0.42 | 0.54 | -0.75 | 0.79 | -0.62 | -0.59 | 1.04 | -1.58 | -0.02 | -0.87 | -1.25 | -0.83 | 0.25 | -0.42 | -1.25 | 1.33 | 2.25 | 1.4 | -1.68 | -2.38 | 0.93 | 0.94 | 0.72 | 0.81 | 0.23 | 0.53 | -0.13 | -0.13 | -0.13 | 1.4 | -1.38 | -1.19 | -1.07 | 0.17 | -0.53 | -0.4 | -0.51 | -0.4 | -0.73 | -0.57 | -0.11 | 0.07 | 1.67 | 0.23 | -0.36 | 0.19 | 1.12 | 0.11 | 0.21 | -0.28 | -0.51 | -0.13 | 1.07 | -0.62 | 0.13 | 0 | 0.47 | At1g21400 | 260900_s_at (m) | 2-oxoisovalerate dehydrogenase, putative / 3-methyl-2-oxobutanoate dehydrogenase, putative / branched-chain alpha-keto acid dehydrogenase E1 alpha subunit, putative | 4 | C-compound and carbohydrate metabolism | tricarboxylic-acid pathway (citrate cycle, Krebs cycle, TCA cycle) | Valine, leucine and isoleucine degradation | metabolism of acyl-lipids in mitochondria | 2.64 | 5.57 | |||||||
| At5g34780 | 0.541 | dehydrogenase E1 component family protein, similar to 2-oxoisovalerate dehydrogenase alpha subunit (Mus musculus) | 0.51 | -0.13 | -0.2 | -0.33 | 0.41 | -0.5 | -0.18 | -0.47 | -0.27 | 0.12 | 0.02 | -0.2 | 1.18 | 3.2 | -0.52 | -0.25 | -0.14 | 0.18 | 0.32 | 0.21 | 0.07 | -0.27 | -1.73 | -0.13 | 0.11 | -0.13 | -0.13 | -0.13 | -0.13 | -0.13 | -0.13 | -0.17 | 0.41 | 0.17 | -0.55 | -0.26 | -0.34 | 0.06 | -0.05 | 1.3 | -0.76 | 1.84 | -0.45 | 0.98 | -0.18 | 1 | -0.81 | 0.87 | -0.42 | 0.54 | -0.75 | 0.79 | -0.62 | -0.59 | 1.04 | -1.58 | -0.02 | -0.87 | -1.25 | -0.83 | 0.25 | -0.42 | -1.25 | 1.33 | 2.25 | 1.4 | -1.68 | -2.38 | 0.93 | 0.94 | 0.72 | 0.81 | 0.23 | 0.53 | -0.13 | -0.13 | -0.13 | 1.4 | -1.38 | -1.19 | -1.07 | 0.17 | -0.53 | -0.4 | -0.51 | -0.4 | -0.73 | -0.57 | -0.11 | 0.07 | 1.67 | 0.23 | -0.36 | 0.19 | 1.12 | 0.11 | 0.21 | -0.28 | -0.51 | -0.13 | 1.07 | -0.62 | 0.13 | 0 | 0.47 | At5g34780 | 260900_s_at (m) | dehydrogenase E1 component family protein, similar to 2-oxoisovalerate dehydrogenase alpha subunit (Mus musculus) | 2 | amino acid metabolism | Valine, leucine and isoleucine degradation | 2.64 | 5.57 | ||||||||
| At5g46180 | 0.533 | DELTA-OAT | ornithine delta-aminotransferase | 0.17 | -0.06 | -0.08 | 0.1 | 0.23 | -0.02 | -0.3 | -0.34 | 0.23 | 0.02 | -0.28 | -0.16 | -0.12 | 0.52 | 0.13 | 0.17 | 0.42 | -0.02 | -0.49 | -0.11 | 0.03 | -0.19 | -0.05 | -0.04 | -0.11 | -0.1 | 0.34 | 0 | -0.1 | 0.34 | 0 | -0.12 | -0.28 | -0.26 | 0.05 | -0.08 | -0.25 | -0.35 | 0 | 0.12 | 0.07 | 0.02 | -0.08 | -0.13 | -0.08 | -0.02 | 0.07 | -0.28 | 0.07 | -0.31 | 0.05 | -0.12 | -0.03 | -0.31 | 0.56 | -0.31 | 0.04 | -0.08 | 0.06 | -0.25 | -0.03 | 0.09 | 0.43 | 0.32 | 0.76 | 0.26 | -0.19 | 0.03 | 0.41 | 0.31 | 0.39 | 0.38 | 0.04 | 0.21 | -0.03 | -0.08 | -0.03 | 0.67 | -0.67 | -0.67 | 0.26 | 0.01 | 0.06 | -0.12 | -0.12 | -0.14 | 0.08 | 0.08 | -0.05 | -0.02 | 0.12 | 0.05 | -0.19 | -0.05 | -0.26 | 0.01 | -0.23 | -0.18 | -0.27 | -0.13 | -0.08 | -0.24 | -0.06 | 0.2 | 0.8 | At5g46180 | 248879_at | DELTA-OAT | ornithine delta-aminotransferase | 9 | ornithine-oxo-acid transaminase activity | proline biosynthesis | hyperosmotic salinity response | amino acid metabolism | lysine biosynthesis I | biosynthesis of proto- and siroheme | biotin biosynthesis I | arginine degradation II | arginine degradation III | arginine degradation V | glutamate degradation I | chlorophyll biosynthesis | Arginine and proline metabolism | Urea cycle and metabolism of amino groups | 0.74 | 1.47 | ||||
| At4g22260 | 0.530 | IM | Similar to mitochondrial alternative oxidase. im mutants have a variagated phenotype and fail to differentiate chloroplasts in the majority of their cells under high light intensity continuous illumination. The white tissues of immutans accumulate phytoe | -0.04 | -0.05 | 0.05 | -0.32 | -0.03 | -0.06 | -0.39 | -0.19 | 0.01 | -0.33 | -0.08 | -0.34 | -0.56 | 0.03 | -0.22 | -0.21 | 0.09 | -0.25 | -0.51 | -0.41 | -0.16 | -0.32 | -0.16 | -0.19 | -0.08 | -0.04 | -0.21 | -0.09 | -0.04 | -0.21 | -0.09 | -0.2 | 0.17 | -0.43 | -0.2 | -0.22 | -0.33 | -0.56 | 0.15 | -0.02 | 0.06 | 0.1 | 0.08 | -0.09 | 0.08 | 0.04 | 0.26 | 0.14 | 0.12 | 0.17 | 0.2 | 0.11 | 0.02 | -0.18 | 0.17 | -0.15 | 0.27 | 0.07 | -0.09 | 0.09 | 0.05 | -0.02 | 0.45 | 0.36 | 0.47 | 0.47 | 0.13 | 0 | 0.12 | 0.28 | 1.31 | 0.47 | -0.01 | -0.19 | -0.02 | 0.06 | 0.01 | 0.35 | -0.27 | -0.44 | -0.38 | 0.17 | 0.27 | 0.1 | -0.06 | 0 | 0.08 | -0.14 | -0.02 | -0.1 | 0.11 | 0.07 | 0.17 | 0.03 | 0.08 | -0.08 | -0.06 | 0.09 | 0.05 | -0.03 | 0.01 | -0.14 | 0.04 | 0.44 | 1.32 | At4g22260 | 254335_at | IM | Similar to mitochondrial alternative oxidase. im mutants have a variagated phenotype and fail to differentiate chloroplasts in the majority of their cells under high light intensity continuous illumination. The white tissues of immutans accumulate phytoe | 10 | carotenoid biosynthesis | plastid organization and biogenesis | response to high light intensity | response to temperature | Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Regulatory enzymes | Accessory protein/regulatory protein | 0.85 | 1.89 | |||||
| At4g15530 | 0.526 | pyruvate phosphate dikinase family protein | 0.28 | -0.14 | -0.36 | -0.41 | 0.24 | -0.36 | -0.48 | -0.89 | -0.14 | 0.04 | -0.08 | -0.33 | -0.41 | 1.64 | -0.32 | -0.12 | 0.15 | -0.63 | -0.16 | 0.16 | -0.69 | 0.28 | -0.4 | -0.28 | -0.23 | 0.22 | 0.25 | 0.42 | 0.22 | 0.25 | 0.42 | 0.45 | 0.84 | 0.16 | -0.13 | -0.12 | -0.56 | -0.36 | -0.02 | 1.17 | 0.06 | 1.32 | -0.22 | 1.4 | 0.05 | 1.37 | -0.28 | 0.94 | -0.25 | 0.79 | 0.12 | 1.12 | -0.34 | -1.19 | 1.75 | -1.21 | 0.34 | -0.44 | -0.4 | -2.4 | 0.56 | -0.4 | -0.11 | -0.03 | 1.57 | 0.01 | -1 | -0.84 | 0.38 | 0.59 | 0.12 | -0.14 | -0.14 | -0.14 | -0.14 | -0.14 | -0.14 | 0.87 | -1.02 | -1.37 | -0.14 | -0.14 | -0.14 | -0.14 | -0.14 | -0.19 | -0.14 | -0.14 | -0.14 | -0.14 | 0.61 | -0.04 | 0.05 | 0.01 | 0.18 | -0.09 | 0.01 | -0.07 | -0.04 | -0.08 | 0.17 | -0.45 | -0.22 | -0.2 | 1 | At4g15530 | 245528_at | pyruvate phosphate dikinase family protein | 2 | glycolysis and gluconeogenesis | photosynthesis | energy conversion and regeneration | gluconeogenesis | glyceraldehyde 3-phosphate degradation | acetyl-CoA assimilation | Pyruvate metabolism | Carbon fixation | Intermediary Carbon Metabolism | 2.27 | 4.15 | ||||||
| At3g45300 | 0.519 | IVD | isovaleryl-CoA-dehydrogenase | 0.09 | -0.06 | 0.26 | -0.14 | 0.54 | 0.23 | -0.24 | -0.25 | 0.05 | -0.11 | -0.28 | 0.05 | -0.24 | 1.52 | 0.07 | -0.28 | 0.06 | -0.13 | -0.27 | 0.2 | -0.14 | -0.38 | -0.45 | -0.21 | -0.16 | -0.04 | -0.22 | -0.22 | -0.04 | -0.22 | -0.22 | -0.27 | -0.15 | -0.65 | -0.13 | -0.25 | -0.33 | -0.17 | -0.23 | 0.76 | -0.3 | 0.82 | -0.4 | 0.48 | -0.13 | 0.75 | -0.17 | 0.55 | 0.45 | 0.2 | 0.42 | 0.35 | -0.23 | -0.52 | 0.45 | -0.56 | 0.17 | -0.94 | -0.04 | 0.01 | 0.17 | -0.43 | -0.98 | 0.15 | 0.97 | 0.3 | -0.7 | -0.99 | 0.93 | 0.96 | -0.25 | 0.77 | -0.07 | 0.28 | -0.01 | -0.13 | -0.04 | 1.21 | -0.53 | -0.61 | -0.06 | -0.06 | -0.16 | -0.05 | -0.06 | -0.14 | -0.05 | -0.06 | -0.06 | 0.07 | 0.66 | 0.09 | -0.13 | 0.14 | 0.38 | 0.12 | 0.08 | -0.18 | -0.28 | 0 | 0.37 | -0.28 | -0.44 | -0.12 | 0.54 | At3g45300 | 252570_at | IVD | isovaleryl-CoA-dehydrogenase | 10 | leucine catabolism | amino acid metabolism | leucine degradation II | leucine degradation I | Valine, leucine and isoleucine degradation | metabolism of acyl-lipids in mitochondria | 1.41 | 2.52 | |||
| At5g16340 | 0.508 | similar to AMP-binding protein (Brassica napus) | 0.35 | -0.03 | -0.14 | -0.25 | 0.23 | -0.02 | -0.5 | -0.14 | 0.19 | 0.2 | 0.25 | 0.31 | 0.07 | 0.74 | 0.48 | 0.1 | 0.39 | 0.32 | 0.11 | 0.22 | 0.41 | -0.01 | -0.42 | 0.1 | 0.06 | -0.18 | 0.28 | -0.04 | -0.18 | 0.28 | -0.04 | 0.05 | 0.36 | -0.57 | -0.27 | -0.37 | -0.27 | -0.3 | -0.48 | 0.06 | -0.28 | 0.28 | -0.68 | 0.22 | -0.27 | 0.5 | -0.18 | -0.06 | -0.5 | 0.1 | -0.4 | 0.37 | -0.56 | -0.82 | 0.92 | -0.36 | 0.04 | -0.8 | -0.41 | -0.21 | 0.02 | -0.42 | -1.41 | 0.21 | 0.83 | 0.45 | -0.73 | -0.99 | 0.72 | 0.69 | 0.56 | 0.71 | 0.19 | 0 | -0.14 | 0.12 | -0.09 | 0.86 | -0.86 | -0.67 | 0.61 | -0.17 | -0.26 | -0.16 | -0.02 | 0.35 | -0.15 | 0.09 | -0.14 | 0.01 | 0.61 | -0.01 | -0.09 | -0.02 | 0.53 | 0.05 | 0.34 | -0.28 | -0.21 | 0.04 | 0.43 | -0.22 | 0.1 | 0.11 | 0.16 | At5g16340 | 250114_s_at | similar to AMP-binding protein (Brassica napus) | 2 | lipid, fatty acid and isoprenoid metabolism | Phenylpropanoid pathway | Acyl activating enzymes , CoA ligases, clade VI | 1.43 | 2.33 | |||||||
| page created by Vincent Sauveplane | 06/26/06 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||