Co-Expression Analysis of: CYP71B35 (At3g26310) Institut de Biologie Moléculaire des Plantes

































































































































































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Organ and Tissue Data Set view / save heatmap as: OpenOffice table annotation details for co-expressed genes can be found to the right of the heatmap
















































































































































































MS Excel table
















































































































































































save / view all data as: Tab delimited Table For further information on the experiments please go to the Genevestigator database using the experiment-ID given in brackets.













































































































































































shown are a maximum of 50 genes with r>0.5 (If more co-expressed genes with r>0.5 exist, they can be saved as Tab delimited data only) magnitude of change [log2(sample / average)]  0   0.3   0.6   0.9  1.2   1.5   1.8   2.1   2.4   2.7   >2.99 










































































































































































greater than zero                                                         










































































































































































less than zero                                                         










































































































































































Locus r-value Name Description suspension cell, aphidicolin, 0h ( 5) suspension cell, aphidicolin, 2h (5) suspension cell, aphidicolin, 4h (5) suspension cell, aphidicolin, 6h (5) suspension cell, aphidicolin, 8h (5) suspension cell, aphidicolin, 10h (5) suspension cell, aphidicolin, 12h (5) suspension cell, aphidicolin, 14h (5) suspension cell, aphidicolin, 16h (5) suspension cell, aphidicolin, 19h (5) suspension cell, sucrose, 0h (6) suspension cell, sucrose, 2h (6) suspension cell, sucrose, 4h (6) suspension cell, sucrose, 6h (6) suspension cell, sucrose, 8h (6) suspension cell, sucrose, 10h (6) suspension cell, sucrose, 12h (6) suspension cell, 1d (19) suspension cell, 1d (19) suspension cell, 5d (19) suspension cell, 7d (19) suspension cell, senescing (20) protoplast (62) suspension cell, light (153) suspension cell, dark (153) callus, transdifferentiation A1 (78) callus, transdifferentiation A2 (78) callus, transdifferentiation A3 (78) callus, transdifferentiation A4 (78) callus, transdifferentiation A5 (78) callus, transdifferentiation A6 (78) seedling (59) seedling (137) seedling (138) seedling (143) seedling (144) seedling, cont. light, 26h (149) seedling, cont. light, 26h (149) seedling, cont. light, 34h (149) seedling, cont. light, 38h (149) seedling, cont. light, 42h (149) seedling, cont. light, 46h (149) seedling, cont. light, 50h (149) seedling, cont. light, 54h (149) seedling, cont. light, 58h (149) seedling, cont. light, 62h (149) seedling, cont. light, 66h (149) seedling, cont. light, 70h (149) seedling, cont. light, 74h (149) seedling, far red then white light (83) seedling, dark then white light (83) Cotyledon (87) Hypocotyl (87) Hypocotyl (139) leaf, dedifferentiation A01 (50) leaf, dedifferentiation A02 (50) leaf, dedifferentiation A81 (50) leaf, dedifferentiation A82 (50) leaf, dedifferentiation A301 (50) leaf, dedifferentiation A302 (50) leaf, dedifferentiation A481 (50) leaf, dedifferentiation A482 (50) leaf, dedifferentiation B01 (50) leaf, dedifferentiation B02 (50) leaf, whole rosette, 0h (56) leaf, whole rosette, 0h (56) leaf, whole rosette, 2h (56) leaf, whole rosette, 4h (56) leaf, whole rosette, 8h (56) leaf, whole rosette, 12h (56) leaf, whole rosette, 13h (56) leaf, whole rosette, 14h (56) leaf, whole rosette, 16h (56) leaf, whole rosette, 20h (56) leaf, whole rosette, 24h (56) leaf, whole rosette, 0h (56) leaf, whole rosette, 4h (56) leaf, whole rosette, 8h (56) leaf, whole rosette, 12h (56) leaf, whole rosette, 16h (56) leaf, whole rosette, 20h (56) leaf, mature, high light (68) leaf, mature, low light (68) leaf stage 7, petiol (88) leaf stage 7, proximal half (88) leaf stage 7, distal half (88) guard cell enriched (11) senescing leaf, Col5 (60) senescing leaf, Col0 (60) senescing leaf (88) cauline leaf (88) roots (87) whole roots, A. halleri (101) whole roots, A. petrea (101) roots (141) mature roots (23) lateral roots (24) lateral roots (29) roots, axillary buds, dormant (30) roots, axillary buds, active (30) Roots, N03 depleted, dex treated (64) Roots, N03 depleted (64) root elongation zone (79) stem (80) stem (88) stem, base (66) stem, tip (66) stem, 1st node (88) stem, base, injured with needle (8) shoot apex (87) shoot apex (87) shoot apex (88) apical region, vegetative, Col (94) apical region, reproductive, 3d, Col (94) apical region, reproductive, 5d, Col (94) apical region, reproductive, 7d, Col (94) apical region, vegetative, Ler (94) apical region, reproductive, 3d, Ler (94) apical region, reproductive, 5d, Ler (94) apical region, reproductive, 7d, Ler (94) flower, stage 9 (89) flower, stage 10 (89) flower, stage 12 (89) flower, stage 15 (89) flower-silique, stage I (84) flower-silique, stage II (84) flower-silique, stage III (84) flower bud, young (9) flower bud, old (9) flower (80) flower (92) flower (100) sepal, stage 12 (89) sepal, stage 15 (89) petal, stage 12 (89) petal, stage 15 (89) stamen, stage 12 (89) stamen, stage 15 (89) carpel, stage 12 (89) carpel, stage 15 (89) pedicel, stage 15 (89) pollen, uninucleate microspores (22) pollen, bicellular (22) pollen, tricellular (22) pollen, mature (22) pollen (74) silique, young (136) silique, old (136) silique, stage 3 (90) silique, stage 4 (90) silique, stage 5 (90) seed, stage 6 (90) seed, stage 7 (90) seed, stage 8 (90) seed, stage 9 (90) seed, stage 10 (90) seed, dry (116) seed, dry (117) seed, fresh (96) seed, dormant (96) seed, imbibed, 1h (117) seed, imbibed, 3h (117) seed, imbibed, 22°C (118) seed, imbibed, far red, 22°C (132) seed, imbibed, 4°C (118) seed, imbibed, far red, 4°C (132) seed, imbibed (116) Locus Probeset Name Description Annotation score GO.keywords FunCat keywords AraCyc annotations KEGG annotations BioPath annotations AcylLipid category Literature annotations Gene family 90% quantile of DE max. DE
At3g26310 1.000 CYP71B35 cytochrome P450 family protein -0.49 -0.49 -0.49 -0.49 -0.49 -0.49 -0.49 -0.49 -0.49 -0.49 -0.49 -0.49 -0.49 -0.49 -0.49 -0.49 -0.49 -0.49 -0.49 -0.49 -0.49 -0.49 -0.49 2 0.81 -0.49 -0.49 -0.49 -0.49 -0.49 -0.49 0.18 0.36 0.47 0.05 0.03 0.97 0.71 0.39 -0.49 1.11 1.25 0.79 -0.18 0.31 0.52 0.35 0.46 0.21 -0.49 0.26 -0.1 -0.51 -0.49 1.94 0.74 -0.49 -0.49 0.46 -0.49 0.4 -0.49 -0.49 -0.49 0.7 0.48 0.05 0.53 0.96 0.72 1.39 1.27 1.62 1.25 0.08 0.15 1.07 0.72 0.14 -0.42 0.57 1.6 1.82 0.09 0.24 0.3 0.6 -0.49 0.31 0.39 1.02 -0.49 -0.49 1.23 -0.49 -0.49 -0.49 -0.49 -0.49 -0.49 -0.49 -0.49 -0.49 -0.49 0.41 -0.49 0.78 -0.28 0.5 0.1 -0.5 0.1 -0.69 -0.49 -0.83 -0.9 -0.52 -0.71 -0.31 0.25 0.43 0.71 0.1 -0.41 0.63 -0.17 0.01 0.25 0.49 -0.08 0.86 0.98 0.61 -0.24 -0.3 -0.55 -0.49 -0.49 -0.2 -0.32 0.43 -0.49 -0.49 -0.49 -0.49 -0.49 0.75 0.44 0.4 0.33 0.22 0.04 0.48 -0.49 -0.49 -0.49 -0.49 -0.49 -0.49 -0.49 -0.49 -0.49 -0.49 -0.49 -0.49 -0.49 -0.49 At3g26310 256873_at CYP71B35 cytochrome P450 family protein 1






cytochrome P450 family 1.73 2.90
At3g01550 0.742
similar to triose phosphate/phosphate translocator (Cauliflower)(Brassica oleracea) -1.77 -1.77 -1.77 -1.77 -1.77 -1.77 -1.77 -1.77 -1.77 -1.77 -1.77 -1.77 -1.77 -1.77 -1.77 -1.77 -1.77 -1.77 -1.77 -1.77 -1.77 -1.77 -1.77 2.11 0.48 -1.77 -1.77 -1.77 -1.77 -1.77 -1.77 2.31 -1.77 2.54 1.37 -0.26 2.25 1.31 0.54 0.4 1.86 2.64 2.4 1.4 0.52 0.94 2.25 2.72 2.08 -1.77 0.67 2.15 0.68 -1.41 2.52 -0.31 -1.77 -1.77 1.02 0.89 -1.77 -1.77 -1.77 -1.77 1.07 1.22 1.21 1.24 2.29 3.23 3.6 3.85 3.43 1.86 0.54 2.65 3.17 1.69 0.65 1.46 2.35 3.34 3.52 1.71 2.56 2.56 2.14 0.28 1.8 -1.77 1.64 -1.77 0.74 1.09 -1.77 -1.77 -1.77 -1.77 0.36 1.24 -1.77 -1.77 -1.77 1.51 -0.36 -0.69 1.77 0.91 -1.77 1.42 0.48 0.5 -0.27 0.13 0.39 0.56 1.11 -0.53 0.09 0.74 0.94 1.23 0.94 0.24 1.65 1.32 2.34 0.65 0.95 1.06 1.43 1.87 1.28 -0.34 -1.77 -1.77 -1.75 -1.77 0.86 0.7 3.05 -1.77 -1.77 -1.77 -1.77 -1.77 1.21 0.67 2.66 0.56 0.06 -1.77 -1.77 -1.77 -1.77 -1.77 -1.77 -1.77 -1.77 -1.77 -1.77 -1.77 -1.77 -1.77 -1.77 -1.77 -1.77 At3g01550 259185_at
similar to triose phosphate/phosphate translocator (Cauliflower)(Brassica oleracea) 4 triose phosphate transport transported compounds (substrates) | C-compound and carbohydrate transport | transport facilitation

Phenylpropanoid Metabolism | Aromatic amino acid (Phe, Tyr, Trp) metabolism


4.48 5.62
At4g39970 0.730
haloacid dehalogenase-like hydrolase family protein -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.36 1.93 1.84 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 1.75 0.7 1.12 2.52 0.68 0.68 1.1 1.18 0.81 1.3 1.19 1.12 1.23 1.33 1.13 1.12 1.37 1.05 0.78 1.22 1.95 0.34 1.14 1.76 0.34 0.22 0.38 0.25 0.22 -0.36 -1.83 -1.83 -1.83 2.2 2.31 2 2.06 2.15 2 2.02 2.19 2.37 2.62 2.31 2.18 2.49 2.67 2.54 2.36 2.62 2.92 3.05 1.87 2.31 2.18 1.75 1.1 0.81 -0.08 1.38 -1.83 0.19 0.06 -1.83 -1.83 -1.83 -1.83 -0.07 0.74 -1.83 -1.83 -1.83 1.01 0.44 1.01 2.04 0.33 0.73 1.08 -0.06 -0.65 -1.14 -1.64 -1.69 -2.1 0 -1.1 -1.2 -1.3 0.24 0.95 0.88 0.19 1.06 0.8 1.86 1.34 1.66 0.13 0.82 1.03 1.88 0.47 0.95 0.2 -0.65 -0.17 0.18 0.47 1.79 -1.83 -1.83 -1.83 -1.83 -1.83 1.65 0.14 1.23 0.28 0.03 -0.83 -1.35 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.04 -1.83 -1.83 -0.51 -0.51 -1.83 -1.83 -1.67 At4g39970 252876_at
haloacid dehalogenase-like hydrolase family protein 2

superpathway of serine and glycine biosynthesis II | cysteine biosynthesis II | glycine biosynthesis I | serine biosynthesis | photorespiration




4.19 5.14
At1g64860 0.724 SIGA Subunit of chloroplast RNA polymerase, confers the ability to recognise promoter sequences on the core enzyme -1.39 -2.86 -2.86 -2.86 -1.56 -1.33 -2.86 -2.86 -2.86 -2.86 -0.3 -0.95 -1.42 -1.25 -1.08 -1 -2.86 -1.43 -0.9 -2.86 -0.89 -1.22 -0.28 2.06 2.31 -1.18 -1.21 -1.71 -1.51 -1.23 -0.85 1.81 0.6 2.45 1.68 0.17 1.81 1.65 0.98 1.05 1.5 2.15 2.13 1.3 0.86 1.2 1.74 1.96 1.69 0.85 1.63 2.18 0.49 -0.16 2.73 1.47 -0.39 0.6 0.35 0.8 0.19 -0.15 -1.09 -0.6 0.85 0.95 0.73 1.23 2.45 2.92 2.17 2.66 2.69 1.51 1.07 2.11 2.34 1.19 0.64 0.95 1.99 2.7 2.79 1.14 1.5 1.57 1.04 -0.67 -0.16 0.89 2.41 -1.23 0.88 0.32 -1.34 -1.02 -0.53 -1.28 0.09 0.43 -1.22 -1.33 -1.14 -0.41 1.29 0.3 0.68 0.57 0.48 1.08 0.52 0.23 0.56 0.42 0.55 0.33 0.72 0.56 0.26 0.28 0.77 0.93 0.61 0.45 0.73 0.56 0.84 0.81 1.09 0.1 0.81 0.5 1.55 0.6 -0.33 -0.28 -2.45 -0.92 0.02 0.54 1.56 -2.86 -3.02 -2.86 -2.86 -2.86 1.06 0.38 0.99 0.92 0.56 -0.17 -0.04 -1.51 -1.96 -2.86 -2.86 -3.12 -2.35 -1.21 -2.86 -3.2 -1.75 -1.75 -2.86 -2.86 -0.8 At1g64860 262879_at SIGA Subunit of chloroplast RNA polymerase, confers the ability to recognise promoter sequences on the core enzyme 10 transcription initiation


Transcription (chloroplast)


5.25 6.12
At1g69523 0.723
UbiE/COQ5 methyltransferase family protein -1.26 -1.26 -1.26 -1.26 -1.26 -1.26 -1.26 -1.26 -1.26 -1.26 -1.26 -1.26 -1.26 -1.26 -1.26 -1.26 -1.26 -1.26 -1.26 -1.26 -1.26 -1.26 -1.26 2.52 1.27 -1.26 -1.26 -1.26 -1.26 -1.26 -1.26 1.21 -0.67 1.9 2 -1.03 0.78 0.88 1.43 1.26 1.63 1.6 1.39 1.18 1.51 1.59 1.53 1.47 1 -0.28 -0.27 1.7 -0.98 -0.73 2.22 0.33 0.72 0.22 -0.06 0.1 -1 -1.26 -0.06 -1.26 2.06 2 1.66 1.51 1.52 1.24 1.42 2.13 1.99 1.94 2.14 1.4 2.52 2.29 2.67 1.99 2.15 1.89 1.97 0.37 1.92 1.53 0.28 1.03 0.21 -1.46 1.13 -1.28 0.01 0 -1.26 -1.26 -1.26 -1.26 0.39 1.1 -1.26 -1.26 -1.26 -0.07 0.41 -0.54 1.14 0.23 -0.88 0.63 -1.09 -1.28 -1.35 -1.07 -1.26 -1.48 -0.49 -1.26 -1.26 -1.61 0.16 1.15 0.89 0.49 0.12 0.54 1.21 0.34 0.8 -0.25 0.47 0.56 2.57 0.9 -0.25 -1.21 -0.33 -0.99 -0.56 0.26 2.44 -1.26 0.12 -1.26 0.05 -1.26 2.15 -0.01 1.37 1.35 0.5 -1.26 -1.26 -1.26 -1.26 -1.26 -1.26 -1.26 -1.26 -1.26 -1.26 -1.26 -1.26 -1.26 -1.26 -1.26 -1.48 At1g69523 256304_at
UbiE/COQ5 methyltransferase family protein 2

carbon monoxide dehydrogenase pathway




3.40 4.28
At3g19480 0.723
D-3-phosphoglycerate dehydrogenase, putative / 3-PGDH, putative -1.65 -1.65 -1.65 -1.65 -0.16 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 0.59 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.12 3.08 2.7 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 2.17 0.65 2.69 1.59 0.87 0.96 1.05 1.2 0.83 1.48 2.02 1.46 0.93 1.46 1.27 1.73 1.8 0.95 0.99 2.25 2.83 0.28 -1.65 2.39 0.35 0.62 0.23 -0.03 0.57 0.44 0.32 -1.65 -0.41 2.44 2.23 2.17 2.41 2.59 2.34 2.61 2.78 2.96 2.4 2.29 2.44 3.06 2.45 2.24 2.6 2.93 2.92 2.76 1.87 2.67 2.39 1.58 1.64 0.74 -0.24 1.67 -1.65 -1.65 0.06 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 1.63 0.88 -1.65 -0.09 1.3 -1.65 1.03 -0.07 -1.01 -0.84 -0.6 -1.22 -1.31 -0.82 -1.65 -1.52 -1.91 -0.01 0.88 0.63 0.16 0.15 -0.25 1.11 -1.65 -0.83 0.49 0.34 0.14 2.16 0.26 -0.33 0.06 -1.65 -1.11 -0.78 0.13 2.58 -1.65 -1.65 -1.65 -1.65 -1.65 1.43 -0.34 1.42 1.03 0.46 -1.37 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 -1.65 At3g19480 258025_at (m)
D-3-phosphoglycerate dehydrogenase, putative / 3-PGDH, putative 4

phosphoglycerate dehydrogenase, cysteine biosynthesis II | phosphoglycerate dehydrogenase, serine biosynthesis Glycine, serine and threonine metabolism



4.35 4.99
At3g10230 0.719 LYC Encodes lycopene cyclase which catalyzes the formation of beta rings in lycopene. -1.12 -1.66 -1.27 -1.19 -0.96 -1.25 -0.98 -1.04 -1.28 -1.38 -0.08 -1.58 -1.6 -1.4 -1.74 -1.52 -1 -1.48 -1.41 -1.1 -0.89 -0.06 -1.32 1.46 1.2 -0.62 -0.61 -0.55 -0.53 -0.59 -0.32 1.21 -0.06 1.38 0.76 -0.01 0.73 0.82 0.41 0.55 0.78 1.02 0.93 0.82 0.46 0.67 1.05 0.94 0.74 1.06 1.45 1.24 -0.11 0.17 1.84 0.96 -0.5 -0.22 -0.3 0.57 0.04 -0.48 -0.47 -0.82 0.73 0.48 0.49 0.8 1.35 1.57 1.55 1.82 1.58 0.84 0.62 1.22 1.33 0.69 0.63 0.98 1.26 1.86 1.81 0.31 0.76 0.78 0.55 0.56 0.69 0.51 1.72 -0.67 0.08 -0.03 -0.62 -0.47 -0.04 -1.03 0.33 0.26 -0.71 -0.64 -0.79 -0.28 1.02 0.31 0.13 0.4 0.2 0.22 -0.34 -0.42 -0.7 -0.52 -0.54 -0.56 -0.56 -0.5 -0.55 -0.47 0.03 0.25 0.19 0.31 -0.24 0.34 0.28 0.09 0.25 -0.61 0.21 -0.52 1.13 1.14 -0.28 0.88 -0.72 0.39 -0.52 -0.18 0.78 -1.55 -1.62 -1.95 -1.84 -1.56 0.91 0.59 0.34 0.56 0.08 -0.09 -0.33 -0.75 -0.64 -0.59 -0.4 -0.66 -0.65 -0.2 -0.73 -0.51 -0.39 -0.39 -0.35 -0.31 0.04 At3g10230 259140_at LYC Encodes lycopene cyclase which catalyzes the formation of beta rings in lycopene. 10 carotene biosynthesis | lycopene beta cyclase activity
carotenoid biosynthesis Biosynthesis of steroids Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Carotenoid biosynthesis
Carotenoid and abscisic acid metabolism | carotenid biosynthesis
3.00 3.82
At2g39470 0.711
photosystem II reaction center PsbP family protein -2.25 -2.86 -2.86 -2.86 -2.86 -2.86 -2.86 -2.86 -2.86 -2.86 -1.7 -2.5 -2.86 -2.86 -2.86 -2.86 -2.86 -2.86 -2.86 -2.86 -2.86 -2.86 -1.86 2.31 2.35 -2.86 -2.45 -2.86 -2.58 -2.9 -2.49 2.31 1.24 2.37 2.97 0.87 1.97 1.88 2.12 2.21 2.21 2.31 1.97 1.96 2.18 2.46 2.19 2.11 1.85 1.21 1.83 2.54 -0.41 1.01 3.4 1.48 0.6 0.4 0.55 1.71 0.07 -0.7 -2.86 -2.86 2.98 2.92 2.79 2.93 3.23 3.22 2.81 3.01 2.88 2.74 3.02 2.96 3.02 2.84 3.22 3.43 3.45 3.42 3.56 1.95 2.77 2.67 1.68 2.57 2.24 -2.72 1.95 -3.09 0.12 1.18 -2.86 -2.86 -1.79 -2.86 0.99 1.85 -2.8 -2.86 -2.86 1.37 0.43 1.69 2.35 0.47 0.53 1.4 0.07 -0.4 -0.52 -0.27 -0.66 -0.83 0.41 -0.56 -0.89 -0.79 0.67 1.41 1.2 0.46 1.25 0.56 1.65 1.65 1.63 0.68 0.88 1.08 2.29 0.11 -0.31 -2.88 -2.18 -3 -0.27 0.69 2.68 -1.32 -1.46 -2.86 -2.86 -2.86 1.42 0.19 1.55 0.67 0.43 -0.73 -1.03 -2.6 -2.36 -2.86 -2.29 -2.61 -2.71 -1.91 -2.48 -2.86 0.01 0.01 -2.86 -2.86 -1.43 At2g39470 266979_at
photosystem II reaction center PsbP family protein 2



Photosystems | additional photosystem II components | psbP family of thylakoid proteins


5.89 6.65
At3g01660 0.707
expressed protein -1.52 -1.52 -1.52 -1.52 -1.52 -1.52 -1.52 -1.52 -0.54 -1.52 -0.07 -0.94 -1.52 -1.52 -1.52 -1.75 -1.52 -1.52 -1.52 -1.52 -1.52 -1.52 -1.49 1.02 0.14 -1.52 -1.52 -1.52 -1.52 -1.52 -1.52 1.45 1.1 0.89 1.73 -0.24 0.88 0.73 1.27 1.39 1.18 1.29 0.8 0.86 0.98 1.3 1.51 1.25 0.94 0.54 0.74 1.04 -0.48 0.79 1.18 0.56 0.33 0.26 -0.26 -0.03 0.66 -0.03 -1.52 -1.52 2.42 1.74 1.92 2.06 2.12 1.6 1.81 1.96 1.55 1.97 2.48 1.04 1.59 1.95 2.64 2.23 2.08 1.91 1.73 0.75 1.52 1.21 0.82 2.23 2.06 1.04 2.09 -1.52 0.1 0.79 -1.52 -1.52 -1.52 -1.52 1.07 1.23 -1.52 -1.52 -1.52 -0.11 0.68 0.5 1.09 0.01 0.94 0.05 -0.37 -0.44 -1.42 -1.23 -1.23 -1.27 -0.59 -0.83 -0.79 -0.64 0.6 1.05 0.6 0.32 0.15 0.51 0.47 0.75 0.61 -0.18 0.66 0.39 1.17 0.73 -0.6 -0.45 -1.54 -0.2 -0.25 0.18 1.39 -1.35 -1.52 -1.3 -1.3 -1.52 1.28 1.33 0.84 0.19 -0.53 -0.52 -1.34 -1.31 -1.13 -1.05 -1.02 -0.68 -1.52 -1.52 -0.73 -1.52 -1.52 -1.52 -0.95 -0.55 -1.12 At3g01660 259179_at
expressed protein 1

carbon monoxide dehydrogenase pathway




3.59 4.39
At1g17050 0.702
geranyl diphosphate synthase, putative / GPPS, putative / dimethylallyltransferase, putative / prenyl transferase, putative -1.4 -1.4 -1.4 -1.4 -1.4 -1.4 -1.4 -1.4 -1.4 -1.4 -1.4 -1.4 -1.4 -1.4 -1.4 -1.4 -1.4 -1.4 -1.4 -1.4 -1.4 -1.4 -0.27 2.67 2.4 0.76 0.24 -0.19 -0.59 -0.55 -0.09 2.78 0.64 2.6 1.22 0.34 1.18 0.01 -0.47 -0.25 1.22 1.67 1.14 -0.08 -0.22 0.7 1.43 1.44 0.77 1.71 2.18 1.75 -0.13 -1.1 1.5 -1.05 0 0.05 -0.68 -0.13 -0.51 -0.49 -1.48 -0.79 1.02 1.08 0.49 0.93 1.54 1.97 3.03 3.17 2.54 0.55 0.88 1.26 1.81 -0.56 0.55 0.53 1.32 3.2 3.12 0.22 1.09 1.14 0.13 0.18 0.42 0.01 1.23 -0.53 -0.33 -0.34 -0.55 -0.09 -0.44 -0.08 -0.71 -1.19 0.89 1.17 0.13 -1.05 0.1 -0.36 -0.44 0.02 0.93 0.22 -0.56 -0.96 -1.07 -1.05 -1.19 -1.04 -0.56 -1.32 -1.59 -1.11 0.04 0.79 0.56 0.84 0.28 0.69 0.59 -0.53 0.25 -1.26 -0.03 0.03 2.23 2.09 0.07 0.51 -1.41 0.41 -1.05 -0.6 1.29 -1.4 -1.4 -1.4 -1.4 -1.4 1.31 0.86 0.43 1.1 0.5 -0.27 0.01 -0.41 0.31 -0.76 -1.24 -0.91 -1.14 -1.03 -0.38 -0.62 -1.48 -1.48 -1.14 -1.12 -1.72 At1g17050 262526_at
geranyl diphosphate synthase, putative / GPPS, putative / dimethylallyltransferase, putative / prenyl transferase, putative 4 dimethylallyltranstransferase activity


Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Biosynthesis of prenyl diphosphates | Isoprenoid Biosynthesis in the Cytosol and in Mitochondria
polyprenyl diphosphate biosynthesis
3.75 4.92
At3g56650 0.702
thylakoid lumenal 20 kDa protein -1.23 -1.76 -1.43 -1.43 -1.34 -1.49 -1.43 -1.43 -1.43 -1.65 -0.06 -1.78 -1.43 -1.43 -1.43 -1.43 -1.43 -1.33 -1.43 -1.43 -1.43 -1.2 -1.43 1.77 1.94 -1.43 -1.43 -1.43 -1.43 -1.43 -1.43 1.01 0.13 1.25 1.89 -0.42 0.73 0.9 1.12 1.07 0.88 0.78 1.11 1.3 1.11 1.03 0.79 1.01 0.7 0.84 1.39 1.66 -0.4 0.28 1.79 0.69 -1.17 -0.83 -0.1 0.43 -0.93 -0.99 -1.43 -2.1 1.58 1.74 1.79 1.72 1.82 1.86 1.69 1.57 1.65 1.64 1.56 1.71 1.96 2.14 2.08 2.19 2.27 2.34 2.46 1.49 1.96 1.87 0.61 0.99 1.01 -0.64 1.23 -1.6 0.34 0.26 -1.43 -1.43 -1.43 -1.43 0.56 1.25 -1.43 -1.43 -1.43 0.37 0.19 0.47 1.25 0.13 -0.64 1.41 0.48 0.13 -0.14 -0.02 -0.05 -0.21 0.08 -0.11 -0.08 -0.15 0.64 0.84 0.39 0.11 0.63 0.24 0.72 0.7 0.67 -0.05 0.41 0.15 1.12 -0.68 -0.17 -0.35 -1.63 -0.63 -0.39 0.14 1.53 -1.43 -1.43 -1.43 -1.43 -1.43 0.63 0.53 1.03 0.14 -0.05 -0.73 -1.01 -1.13 -1.12 -1.23 -1.42 -1.43 -1.07 -0.37 -1.66 -2.02 -0.45 -0.45 -1.05 -0.74 -0.49 At3g56650 251701_at
thylakoid lumenal 20 kDa protein 6



Photosystems | additional photosystem II components | psbP family of thylakoid proteins


3.39 4.55
At2g03750 0.701
sulfotransferase family protein, similar to steroid sulfotransferases (Brassica napus) -2.34 -2.34 -2.34 -2.34 -2.34 -2.34 -2.34 -2.34 -2.34 -2.34 -2.34 -2.34 -2.34 -2.34 -2.34 -2.34 -2.34 -2.34 -2.34 -2.34 -2.34 -1.46 -1.86 1.52 1.89 -2.34 -2.34 -2.34 -2.34 -2.34 -2.34 1.29 0.87 2.33 1.67 0.57 1.87 1.75 1.09 1.57 1.45 1.83 1.88 1.64 1.29 1.34 1.51 1.81 1.71 0.34 1.39 1.87 0.46 0.2 2.84 1.13 -0.27 -0.34 -0.55 0.09 -0.32 -0.64 -2.34 -2.34 1.96 2.11 2.09 2.12 2.7 3 1.74 2.39 2.29 1.91 1.93 2.02 1.81 1.21 1.4 1.69 2.08 2.37 2.83 1.8 1.98 1.88 1.71 1.44 1.72 -0.76 1.98 -2.34 0.26 0.41 -2.34 -2.34 -1.21 -2.34 1.31 1.97 -2.34 -2.34 -2.34 1.75 1.53 1.36 1.23 0.95 1.41 1.46 0.7 1.02 0.07 0.33 0.53 0.62 0.11 -0.12 0.08 0.25 1.52 1.65 1.11 1.41 1.15 1.38 1.67 1.55 1.31 1.81 1.59 1.2 1.02 -1.28 -0.33 -1.31 -2.06 -2.27 0.94 1.82 2 -2.34 -2.34 -2.34 -2.34 -2.34 1.09 0.18 2.13 0.72 0.48 1.38 0.6 -0.73 -2.34 -2.34 -2.34 -2.34 -2.06 -1.14 -2.34 -2.34 -2 -2 -2.38 -2.34 -1.1 At2g03750 264037_at
sulfotransferase family protein, similar to steroid sulfotransferases (Brassica napus) 2





triterpene, sterol, and brassinosteroid metabolism | brassinosteroid modulation
4.47 5.39
At1g09340 0.699
expressed protein -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 3.34 3.21 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 2.77 1.74 3.21 2.74 1.77 2.56 2.21 1.98 2.59 2.9 2.75 2.52 2.15 2.25 2.72 3 2.93 2.22 2.66 2.87 3.39 0.52 0.48 3.3 1.13 1.08 0.85 0.97 1.66 0.4 0.02 -3.82 -3.82 3.25 3.01 3 3.16 3.38 3.41 3.43 3.44 3.46 3.21 3.07 3.08 3.46 3.16 3.35 3.5 3.63 3.71 3.77 3.05 3.53 3.29 2.22 2.17 1.72 0.05 2.73 -3.82 1.04 2.06 -3.82 -3.82 -3.82 -3.82 0.57 1.66 -3.82 -3.82 -3.82 2.9 1.73 0.98 2.34 1.79 1.35 2.52 0.93 0.16 -0.22 0.14 -0.62 -0.71 0.89 -0.4 -0.71 -0.38 1.61 2.19 2.2 1.45 1.85 1.35 2.61 1.48 1.81 1.59 1.71 1.29 2.97 1.4 0.88 -0.32 -1.61 -0.86 0.74 1.73 3.45 -3.82 -2.6 -3.82 -3.82 -3.82 2.25 1.13 2.61 2.15 1.68 -1.29 -1.7 -3.7 -3.82 -3.82 -3.53 -3.82 -3.82 -2.56 -3.82 -3.92 -0.86 -0.86 -2.17 -2.41 -1.39 At1g09340 263676_at
expressed protein 1

colanic acid building blocks biosynthesis | dTDP-rhamnose biosynthesis | galactose degradation I | UDP-glucose conversion | lactose degradation IV




7.26 7.69
At1g19150 0.697 LHCA2*1 PSI type II chlorophyll a/b-binding protein (Lhca2*1) -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 4.18 3.59 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 3 1.82 3.79 3.53 1.36 3.38 3.59 3.18 3.58 3.53 3.59 3.7 3.56 3.5 3.53 3.68 3.65 3.34 2.25 3.21 3.67 -1.68 0.36 4.44 1.88 1.52 1.24 1.21 1.9 -0.57 -0.6 -3.7 -3.7 3.84 3.54 3.52 3.57 3.73 3.58 3.58 3.69 3.91 3.73 3.73 3.3 3.89 3.58 3.78 3.39 3.84 4.05 4.03 2.83 3.93 3.74 2.06 3.15 2.81 -3.7 2.44 -3.7 0.23 1.51 -3.7 -3.7 -3.7 -3.7 0.99 2.61 -3.7 -3.7 -3.7 2.25 1.34 0.7 2.63 1.69 0.64 2.25 0.36 -0.06 -0.43 0.44 -0.41 -0.52 1.11 0.35 -0.06 0.06 1.65 2.23 1.77 1.02 1.78 1.2 2.42 1.89 2.08 0.85 1.41 0.53 3.14 -0.72 -0.2 -2.27 -3.7 -3.7 0.32 1.53 3.6 -3.7 -3.7 -3.7 -3.7 -3.7 1.22 -1.7 2.7 2.27 1.51 -2.74 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -0.76 -0.76 -3.7 -3.7 -2.77 At1g19150 256015_at LHCA2*1 PSI type II chlorophyll a/b-binding protein (Lhca2*1) 10



Photosystems | Chlorophyll a/b binding proteins | light harvesting complex


7.52 8.14
At1g54350 0.696
ABC transporter family protein -0.3 -0.78 -0.56 -0.34 -0.14 -0.37 -0.59 -0.34 -0.25 -0.45 0.15 -0.7 -0.6 -0.92 -0.85 -0.62 -0.55 -0.98 -0.66 -0.65 -0.2 -1 -1.12 1.03 0.89 -1.1 -1.28 -1.63 -1.51 -1.42 -1.41 0.31 -0.09 0.64 0.48 -0.27 0.38 0.69 0.6 0.65 0.69 0.73 0.43 0.73 0.7 0.84 0.71 0.64 0.31 -0.28 0.3 0.94 -0.28 -0.72 1.34 0.22 -0.52 -0.86 -0.34 -0.1 -0.31 -0.64 -1.21 -1.04 1.21 1.22 1.02 1.11 1.24 1.28 1.08 1.19 1.17 1.18 1.38 1.17 1.4 1.4 1.53 1.67 1.68 1.75 1.62 0.23 0.8 0.85 0.56 0.48 0.55 -0.59 0.97 -1.32 -0.03 0.28 -1.14 -1 -0.54 -1.32 0.28 0.79 -1.63 -1.29 -1.34 0.13 0.32 0.76 0.92 0.04 0.53 0.22 -0.14 -0.11 -0.19 -0.3 -0.26 -0.36 -0.18 -0.13 -0.17 -0.13 0.03 0.24 0.01 0.14 -0.03 -0.06 0.12 0.74 0.72 -0.13 -0.03 0.28 0.78 0.23 -0.36 0.06 -1.26 -0.21 -0.35 -0.17 0.86 0.17 0.31 -0.66 -0.72 -0.62 1.02 0.81 -0.28 0.09 -0.08 -0.83 -0.98 -1.32 -1.07 -1.04 -0.41 -0.49 -0.27 -0.02 -0.75 -0.79 -0.42 -0.42 -0.33 -0.22 -0.51 At1g54350 263000_at
ABC transporter family protein 2




Miscellaneous acyl lipid metabolism

2.63 3.38
At4g26530 0.695
strong similarity to Fructose-bisphosphate aldolase, cytoplasmic isozyme (Arabidopsis thaliana) -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 4.7 4.55 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 1.66 2.78 4 4.23 -3.12 0.63 3.33 3.85 3.38 2.82 1.47 2.83 3.89 3.88 3.61 2.89 2.1 1.96 4.12 2.7 4.07 -3.12 0.83 5.21 4.55 1.01 1.29 3.23 3.86 -3.12 -3.12 -3.12 -3.12 4.25 4.34 4.21 4.63 4.79 3.66 2.67 3.73 4.54 5.08 4.17 1.96 4.28 4.51 3.73 4.33 4.2 3.16 3.87 2.54 4.04 3.83 2.81 3.84 2.25 -3.12 3.33 -3.12 0.71 0.28 -3.12 -3.12 -3.12 -3.12 1.76 3.47 -3.12 -3.12 -3.12 3.28 1.3 -0.8 3.17 2.27 0.42 1.52 -3.12 -3.12 -1.68 -3.12 -3.12 -3.12 -2.29 -3.12 -3.12 -3.12 1.11 2.71 2.06 1.26 1.62 0.72 0.28 2.43 2.39 1.96 2.11 0.07 4.12 1.37 -3.12 -3.12 -3.12 -3.12 -3.12 1.03 4.72 -3.12 -3.12 -3.12 -3.12 -3.12 2.99 0.46 1.5 3.69 3.11 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 -3.12 At4g26530 253966_at (m)
strong similarity to Fructose-bisphosphate aldolase, cytoplasmic isozyme (Arabidopsis thaliana) 6
C-compound and carbohydrate metabolism | glycolysis and gluconeogenesis | pentose-phosphate pathway Calvin cycle | mannitol degradation | sorbitol fermentation | sorbitol degradation | fructose degradation (anaerobic) | acetate fermentation | glycolysis I | glycolysis IV Glycolysis / Gluconeogenesis | Pentose phosphate pathway | Fructose and mannose metabolism | Carbon fixation Intermediary Carbon Metabolism | Gluconeogenesis from lipids in seeds


7.65 8.32
At5g19220 0.695 ADG2 Biochemical studies of adg2-1 mutant indicate that mutant plants do not accumulate ADP glucose pyrophosphorylase (ADGase)large subunit protein and that ADGase small subunits assemble as homotetramers. ADG2 gene may encode the large subunit of ADGase. | Encodes the large subunit of ADP-glucose pyrophosphorylase which catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms (ApL1-4) ha -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 2.64 2.87 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 2.02 1.7 2.5 2.37 1.38 2.19 2.27 2.12 1.8 2.18 2.33 2.42 2.4 2.06 2.04 2.25 2.44 2.16 1.11 0.97 2.89 0.62 0.66 2.99 2.4 1.59 1.51 2.04 2.54 0.84 0.65 -3.07 -3.07 2.65 2.67 2.62 2.5 2.6 2.65 2.7 2.95 3.17 2.97 2.81 2.48 3.32 3.2 2.95 2.73 2.97 3.5 3.51 2.02 2.77 2.7 1.33 1.79 2.08 -0.33 2.22 -3.06 0.78 -1.51 -3.07 -3.07 -3.07 -1.79 1.08 1.96 -2.25 -3.07 -1.56 1.46 1.24 1.02 1.77 0.83 -0.65 1.96 0.87 -0.03 0.48 0.36 -0.07 -0.31 0.98 -0.08 -0.41 -0.33 1.39 1.79 1.26 0.89 1.37 0.84 1.77 1.34 1.38 0.9 1.58 0.8 2.24 0.9 0.44 -1.34 -2.4 -2.68 0.46 1.07 2.46 -3.07 -3.07 -3.07 -3.07 -3.07 1.94 0.99 2.04 1.52 1.34 0.68 0.74 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -1.6 -1.6 -3.07 -3.07 -3.07 At5g19220 249927_at ADG2 Biochemical studies of adg2-1 mutant indicate that mutant plants do not accumulate ADP glucose pyrophosphorylase (ADGase)large subunit protein and that ADGase small subunits assemble as homotetramers. ADG2 gene may encode the large subunit of ADGase. | Encodes the large subunit of ADP-glucose pyrophosphorylase which catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms (ApL1-4) ha 10
C-compound, carbohydrate anabolism starch biosynthesis | sucrose biosynthesis | trehalose biosynthesis III | colanic acid building blocks biosynthesis | dTDP-rhamnose biosynthesis | peptidoglycan biosynthesis | UDP-N-acetylglucosamine biosynthesis | galactose degradation I | glucose and glucose-1-phosphate degradation | UDP-glucose conversion | lactose degradation IV | sucrose degradation III Starch and sucrose metabolism Cell Wall Carbohydrate Metabolism | starch metabolism


6.02 6.58
At4g27710 0.694 CYP709B3 cytochrome P450 family protein -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -0.22 -1.35 1.96 1.21 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 0.8 -0.54 1.91 1.33 1.25 1.53 1.82 1.27 0.84 0.96 1.47 1.73 1.88 1.02 0.81 1 1.47 1.61 1.11 1.57 1.44 0.38 0.52 2.65 1.9 -1.35 -0.06 0.6 1.47 0.94 1.44 -1.35 -0.42 0.85 0.48 0.21 0.46 1.06 1.54 1.03 1.35 2.15 1.83 0.98 1.38 1.91 1.21 0.67 0.64 1.04 1.33 1.76 0.36 0.81 0.77 1.35 0.78 1.51 0.13 0.91 -0.14 0.4 -1.35 -0.7 -0.08 1.14 -1.35 0.69 1.54 -1.35 -0.82 -0.45 0.22 0.56 1.21 1.01 0.84 0.84 0.11 -0.9 -0.9 -0.44 -0.36 -1.25 -1.98 -0.22 -0.96 -1.35 -1.04 0.05 0.22 0 0.2 0.8 0.28 0.47 1.38 1.4 -0.02 0.41 0.22 0.63 0.19 -0.34 -1.27 -1.35 -0.75 -0.35 0.14 1.02 -1.35 -1.35 -1.35 -1.35 -1.35 0.55 1.85 1.19 0.23 0.25 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -0.7 -0.7 -1.35 -1.35 -1.35 At4g27710 253886_at CYP709B3 cytochrome P450 family protein 1






cytochrome P450 family 3.17 4.63
At5g09660 0.692
encodes a microbody NAD-dependent malate dehydrogenase -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -1.07 -3.41 2.79 2.91 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 2.75 1.97 2.83 2.75 1.05 2.29 2.38 2.19 2.39 2.56 2.47 2.64 2.42 2.34 2.66 2.65 2.61 2.27 2.11 2.43 3.02 -0.43 2.24 3.33 2.54 1 1 2.24 2.73 0.57 0.2 -3.41 -3.41 3.12 2.85 2.9 2.97 3.16 3 3.24 3.31 3.3 3.05 3.14 2.64 3.05 2.56 2.93 3.13 3.13 3.39 3.45 2.43 3.25 3.29 2.38 2.69 2.72 1.54 3.19 -3.41 1.12 -0.88 -3.41 -3.41 -1.06 -3.41 1.1 1.84 -3.41 -3.41 -3.41 1.83 2.15 2 1.56 1.55 2.02 1.38 -0.12 -0.79 -1.35 -1.05 -1.73 -2.34 0.18 -1.4 -1.99 -1.7 0.79 1.74 1.48 1.33 1.5 1.15 1.47 1.4 1.67 0.76 1.07 0.54 2.85 2.29 -0.89 0.39 -2.5 -0.46 -0.15 0.72 2.65 -3.41 -3.41 -3.41 -3.41 -3.41 2.42 1.6 1.58 2.25 2.16 -2.12 -2.5 -3.41 -3.41 -3.41 -3.41 -3.41 -2.46 -1.29 -3.41 -3.41 -0.8 -0.8 -2 -2.25 -1.27 At5g09660 250498_at
encodes a microbody NAD-dependent malate dehydrogenase 6
C-compound and carbohydrate metabolism | tricarboxylic-acid pathway (citrate cycle, Krebs cycle, TCA cycle) | biogenesis of chloroplast gluconeogenesis | aspartate degradation II | phenylalanine degradation I | serine-isocitrate lyase pathway | formaldehyde assimilation I (serine pathway) | mixed acid fermentation | acetyl-CoA assimilation | glyoxylate cycle | TCA cycle variation VII | TCA cycle variation VIII | TCA cycle variation II | TCA cycle variation IV | TCA cycle -- aerobic respiration Citrate cycle (TCA cycle) | Pyruvate metabolism | Glyoxylate and dicarboxylate metabolism | Carbon fixation | Reductive carboxylate cycle (CO2 fixation) Intermediary Carbon Metabolism | Gluconeogenesis from lipids in seeds


6.59 6.87
At5g23120 0.692 HCF136 encodes a stability and/or assembly factor of photosystem II -1.18 -1.6 -1.58 -1.15 -1.5 -1.71 -2.68 -1.45 -1.52 -1.22 -0.93 -1.58 -1.12 -0.93 -1.48 -1.09 -1.05 -1.37 -1.43 -1.13 -1.38 -1.57 -0.03 2.38 2.5 -2.21 -2.04 -2.52 -2.27 -1.84 -1.71 2.09 0.66 2.02 1.94 0.71 1.03 1.03 1.17 1.42 1.45 1.29 1.2 1.12 1.32 1.6 1.5 1.29 0.84 1.97 1.91 2.17 0.05 0.69 1.86 1.18 -0.16 -0.22 0.84 1.21 -0.87 -1.09 -2.98 -2.56 2 2 1.96 2.13 2.24 2.24 2.16 2.1 2.17 1.98 2.04 2.27 2.27 2.23 2.27 2.25 2.52 2.59 2.63 1.7 2.2 2.18 1.02 0.8 0.76 -0.3 1.57 -3.17 -0.07 0.23 -2.34 -3.09 -1.39 -2.45 0.18 0.67 -2.06 -2.16 -2.24 0.95 1.11 0.35 0.93 0.98 0.19 1.08 0.09 -0.37 -0.6 -0.33 -0.5 -0.57 0.06 -0.16 -0.31 -0.22 0.44 1.01 0.88 0.64 0.62 0.36 0.85 0.75 0.77 -0.05 0.54 0.17 1.9 0.94 0.12 0.59 -1.71 -0.07 -0.06 0.37 2.04 -1.8 -2.29 -2.65 -2.65 -2.68 1.27 0.41 1.13 0.82 0.59 -1.36 -1.71 -2.27 -2.54 -3.04 -2.09 -2.11 -1.56 -0.54 -2.02 -2.83 -1.18 -1.18 -1.69 -1.85 -1.31 At5g23120 249875_at HCF136 encodes a stability and/or assembly factor of photosystem II 10 protein binding | plastid organization and biogenesis | protein complex assembly


Thylakoid biogenesis and photosystem assembly


4.87 5.81
At4g09650 0.690
similar to ATP synthase delta chain, chloroplast precursor (Nicotiana tabacum) -3.12 -3.56 -2.8 -2.71 -2.49 -2.74 -2.85 -2.45 -2.86 -2.65 -1.37 -3.13 -3.2 -2.68 -2.5 -2.52 -2.27 -2.78 -3.25 -3.45 -4.34 -3.18 -1.85 2.73 2.27 -3.09 -3.46 -4.08 -3.5 -3.82 -3.92 2.31 0.7 2.68 2.87 1.89 2.16 2.15 1.91 2 2.04 2.13 2.4 2.29 2.13 2 2.02 2.19 2 1.72 2.48 2.91 0.41 0.52 2.95 1.67 0.86 0.64 0.95 1.51 0.09 0.65 -2.74 -2.04 2.85 2.27 2.47 2.52 2.73 2.68 2.8 2.89 3.15 3.01 2.64 2.37 3.17 2.94 2.78 2.59 2.77 3.19 3.23 2.52 3.1 2.96 1.56 1.8 1.99 -1.02 1.69 -3.46 0.36 1.34 -2.65 -3.47 -1.17 -2.18 0.03 1.35 -2.48 -2.42 -2.04 2.24 1.48 0.07 1.8 1.18 0.1 1.83 0.73 -0.26 -0.06 0.38 -0.16 -0.4 0.62 0.04 -0.32 -0.4 0.71 1.28 1.12 0.61 1.12 1.22 2.18 0.89 1.12 1.19 0.93 1.03 2.02 0.03 0.76 0.46 -1.21 -0.16 -0.18 0.83 2.64 -2.42 -2.25 -2.76 -2.72 -2.58 0.86 -0.04 1.8 1.22 0.89 0.07 -0.89 -2.45 -3.66 -3.46 -3.84 -4.09 -3 -1.11 -4.01 -2.88 -1.64 -1.64 -2.87 -2.81 -0.87 At4g09650 255046_at
similar to ATP synthase delta chain, chloroplast precursor (Nicotiana tabacum) 4
transport facilitation | transport ATPases | biogenesis of chloroplast
ATP synthesis Photosystems | additional photosystem II components | ATP synthase components


6.48 7.58
At1g27480 0.689
lecithin:cholesterol acyltransferase family protein / LACT family protein, similar to LCAT-like lysophospholipase (LLPL) (Homo sapiens) -2.14 -2.14 -2.14 -2.14 -2.14 -2.14 -2.14 -2.14 -2.14 -2.14 0.54 0.89 -2.14 -2.14 -2.14 -2.14 -2.14 -2.14 -2.14 -2.14 -2.14 -2.14 -2.14 2.2 1.56 -2.14 -2.14 -2.14 -2.14 -2.14 -2.14 1.7 1.6 1.86 2.36 1.46 1.26 1.43 1.99 2.12 2.27 2 0.92 0.87 2.04 2.37 2.42 1.57 1.38 2.2 2.06 2.11 0.63 0.7 2.29 0.79 1.7 1.42 0.85 0.62 0.8 0.56 -2.14 -2.14 2.83 2.61 2.5 2.62 2.7 2.17 2.41 2.33 2.12 2.31 2.8 1.4 1.01 0.94 1.7 1.65 1.71 2.5 2.43 1.63 2.25 2.13 0.81 1.99 1.02 -0.27 1.51 -2.14 -2.14 -2.14 -2.14 -2.14 -2.14 -2.14 -2.14 1.51 -2.14 -2.14 -2.14 0.61 0.65 0.84 1.45 0.74 1.25 1.13 -0.03 0.04 -2.14 -1.22 -2.14 -2.14 -0.38 -0.85 -0.53 -0.36 1.23 1.52 1.19 0.71 1.15 0.72 1.47 1.18 1.29 0.76 0.82 0.57 1.76 -0.13 0.5 0.12 -1.41 -0.42 0.27 0.66 1.86 -2.14 -2.14 -2.14 -2.14 -2.14 1.59 1.49 1.14 0.94 0.88 -1.32 -1.12 -2.14 -2.14 -2.14 -2.14 -2.14 -2.14 -2.14 -2.14 -2.14 -0.66 -0.66 -2.14 -2.14 -2.14 At1g27480 264442_at
lecithin:cholesterol acyltransferase family protein / LACT family protein, similar to LCAT-like lysophospholipase (LLPL) (Homo sapiens) 2




Synthesis of membrane lipids in endomembrane system

4.56 4.97
At1g50250 0.689
encodes an FTSH protease that is localized to the chloroplast -1.29 -2.27 -1.02 -2.27 -2.27 -1.42 -2.27 -1.38 -2.27 -1.65 -0.02 -0.56 -0.74 -0.78 -1.29 -1.49 -2.27 -1.73 -1.61 -1.22 -2.27 -1.53 0.82 2.09 2.44 -2.27 -2.27 -2.27 -2.27 -2.27 -2.27 2.13 0.53 1.98 1.28 0.51 1.36 0.65 0.86 0.71 1.31 1.72 1.57 1.06 1.03 1.27 1.27 1.38 1.07 1.83 1.83 1.88 -0.28 -0.12 1.94 0.48 -0.35 -0.31 0.28 1.06 0.57 0.08 -1.15 -1.74 1.25 1.36 1.25 1.3 1.87 1.89 2.29 2.44 2.14 1.52 1.56 1.75 1.89 1.51 1.37 1.5 1.81 2.66 2.43 0.73 1.39 1.39 0.76 0.2 0.42 0.85 1.96 -2.27 -0.47 -1.1 -2.27 -2.27 -1.61 -0.66 -0.18 -0.34 -0.23 -0.56 -0.65 -0.17 0.77 0.07 0.22 0.56 1.43 0.39 -0.83 -0.99 -0.84 -0.56 -0.78 -0.65 -0.06 -0.41 -0.66 -0.49 0.23 1 0.92 1.32 0.26 0.87 0.33 0.61 0.85 -0.65 0.26 -0.36 2.34 2.7 0.39 1.81 -1.2 1.25 -0.28 0.27 1.4 -2.27 -2.27 -2.27 -2.27 -2.27 1.12 0.95 0.42 1.2 1.09 -0.28 -0.56 -2.27 -2.27 -2.27 -0.75 -0.42 -0.16 -0.49 -0.5 -0.16 -1.8 -1.8 -2.27 -2.27 -1.18 At1g50250 262473_at
encodes an FTSH protease that is localized to the chloroplast 10



Chloroplastic protein turnover | FtsH protease (many homologues / subcellular localization ambiguous)


4.39 4.97
At2g20570 0.689 GPRI1 golden2-like transcription factor (GLK1). Encodes a protein containing a GARP DNA-binding domain which interacts with the Pro-rich regions of GBF1 and GBF3. Transactivates transcription in yeast. -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 1.52 -0.2 -1.35 -1.35 -1.35 -1.35 -1.35 -1.35 1.66 0.53 1.48 1.61 0.61 1.56 1.85 1.65 1.73 1.9 2.04 2.06 1.88 1.99 2.04 2.06 2.02 2.4 -1.35 -1.35 1.67 -0.23 1.09 2.71 2.45 0.96 1.3 2.17 1.39 1.26 0.62 0.11 -0.68 2.34 1.5 1.8 2.02 1.93 1.99 2.62 3.04 2.65 2.44 2.31 1.34 2.36 2.21 2.35 1.72 1.94 2.22 2.5 0.94 1.38 1.58 0.93 1.11 0.92 1.89 2.76 -1.35 0.32 -0.17 -1.35 -1.35 -1.35 -1.35 0.61 1.32 -1.35 -1.35 -1.35 -1.35 1.59 0.3 -1.35 0.19 0.21 1.02 0.23 -0.65 -0.55 -0.48 -0.96 -1.15 0.03 -0.6 -1.3 -1.07 0.24 0.11 -1.22 -0.83 -0.45 -1.35 -1.35 0.36 -0.43 -1.35 -0.27 -0.3 -1.3 -0.17 -1.35 -1.35 -1.35 -1.35 -1.35 -1.21 0.43 -1.35 -1.35 -1.35 -1.35 -1.35 0.45 0.7 0.13 -0.48 -0.77 -0.66 -1.18 -1.35 -1.35 -1.35 -1.35 -1.35 -1.23 -1.35 -1.74 -1.35 -1.35 -1.35 -1.35 -1.35 -1.4 At2g20570 263715_at GPRI1 golden2-like transcription factor (GLK1). Encodes a protein containing a GARP DNA-binding domain which interacts with the Pro-rich regions of GBF1 and GBF3. Transactivates transcription in yeast. 10 transcription regulator activity | positive regulation of transcription


Transcriptional regulators (chloroplast)


3.74 4.78
At3g50820 0.688
Encodes a protein which is an extrinsic subunit of photosystem II and which has been proposed to play a central role in stabilization of the catalytic manganese cluster. In Arabidopsis thaliana the PsbO proteins are encoded by two genes -3.26 -3.26 -3.26 -3.26 -1.4 -3.26 -3.26 -3.26 -3.26 -3.26 0.67 -3.26 -3.26 -3.26 -3.26 -3.26 -3.26 -3.26 -3.26 -3.26 -3.26 0.51 -3.26 2.67 2.61 -3.26 -3.26 -3.26 -3.26 -3.26 -3.26 2.12 0.89 2.54 2.92 1.46 2.04 2.52 2.11 2.12 2.21 2.35 2.62 2.58 2.34 2.12 2.4 2.5 2.37 1.95 2.34 2.99 0.45 1.3 3.2 2.25 0.38 0.61 1.94 2.44 0.27 0.63 -3.26 -3.05 2.6 2.18 2.33 2.48 2.66 2.8 2.57 2.81 2.96 2.79 2.37 2.43 3.04 2.75 2.74 2.4 2.68 2.91 2.86 2.62 3.01 2.91 2.25 1.83 1.98 0.34 2.33 -3.26 1.96 1.1 -3.26 -3.26 -0.12 -3.26 0.39 1.4 -3.26 -2.44 -3.26 2.52 1.76 0.68 1.74 1.34 1.43 1.76 0.52 -0.71 0.11 0.56 -0.26 -0.38 0.87 0.44 0 -0.11 0.8 1.38 0.88 0.64 1.3 1.01 1.8 1.26 1.41 0.82 1.2 0.91 2.17 0.75 -0.16 -0.69 -2.43 -1.56 -0.53 0.69 2.62 -3.26 -3.26 -3.26 -3.26 -3.26 1.38 1.18 2.23 1.96 2.06 0.9 0.37 -3.26 -3.26 -3.26 -3.26 -3.26 -3.26 -3.26 -3.26 -3.26 -3.26 -3.26 -3.26 -3.26 -3.16 At3g50820 252130_at
Encodes a protein which is an extrinsic subunit of photosystem II and which has been proposed to play a central role in stabilization of the catalytic manganese cluster. In Arabidopsis thaliana the PsbO proteins are encoded by two genes 7 photosystem II assembly | photosystem II stabilization photosynthesis
Photosynthesis Photosystems | Photosystem II


6.11 6.46
At5g35170 0.683
adenylate kinase family protein -1.15 -2.27 -2.27 -2.27 -1.44 -1.13 -2.27 -2.27 -2.27 -2.27 -0.03 -1.65 -2.27 -2.27 -2.27 -2.27 -2.27 -1.52 -1.21 -1.3 -0.72 -1.25 -1.81 2.1 1.82 -2.27 -2.27 -2.27 -2.27 -2.27 -2.27 1.08 0.19 1.58 1.32 0.17 0.99 1.33 1.66 1.13 1.23 1.18 1.28 1.47 1.21 1.35 1.11 1.1 0.78 -0.48 -0.21 2.16 0 -1.18 3.17 2.14 0.06 0.62 1.59 1.94 0.25 -0.09 -2.27 -1.38 1.52 1.75 1.52 1.3 1.7 1.8 1.44 1.77 2.1 2.13 1.84 1.55 2.09 2.11 1.63 1.69 1.9 1.95 2.02 1.35 1.87 2 0.45 0.92 0.54 0.84 1.84 -1.95 0.44 -1.06 -2.27 -2.27 -2.27 -2.27 0.83 1.2 -2.27 -2.27 -2.27 0.46 0.61 0.56 1.34 0.75 0.27 0.7 -0.21 0.26 0.4 0.14 -0.12 0.31 0.36 -0.02 0.11 0.38 1.14 1.68 1.12 0.87 1.09 0.49 0.39 1.39 1.34 0.12 1.12 0.6 2.12 1.2 1.43 1.02 -0.68 0.2 0.81 0.67 1.73 -0.33 -0.47 -2.27 -2.27 -2.27 1.12 -0.11 0.57 0.54 0.14 -0.75 -0.86 -1.75 -2.27 -2.27 -1.08 -1.14 -1.17 -1.2 -1.21 -1.89 -1.53 -1.53 -2.27 -2.27 -0.71 At5g35170 246651_at
adenylate kinase family protein 2
nucleotide metabolism | biogenesis of chloroplast de novo biosynthesis of purine nucleotides I | de novo biosynthesis of pyrimidine deoxyribonucleotides Nucleotide Metabolism | Purine metabolism



4.35 5.45
At3g11950 0.682
UbiA prenyltransferase family protein -1.28 -1.79 -1.79 -1.79 -1.79 -1.03 -1.79 -0.97 -1.12 -0.9 -0.7 -1.04 -1.3 -1.1 -1.32 -1.27 -1.24 -0.56 -0.72 -1.07 -1.01 -1.79 -1.86 1.82 1.41 -1.01 -2.09 -1.42 -1.45 -1.73 -1.45 1.12 0.04 1.31 0.93 0.28 0.85 0.91 0.97 1.04 1.06 1.3 0.9 1.03 0.94 1.06 1.45 1.33 0.65 0.54 0.77 1.9 0 -0.81 1.85 0.49 0.54 0.42 0.12 0.81 0.33 0.23 -1 -1.19 1.74 1.49 1.66 1.5 1.57 1.4 1.64 1.66 1.72 1.49 1.26 1.53 1.73 1.55 1.66 1.8 1.85 2.02 2.02 1.63 2.12 2 0.11 0.79 0.97 -0.06 1.24 -0.35 0.45 0.28 -0.32 -0.61 -0.96 -0.64 -0.3 0.42 -1.23 -1.29 -0.64 -0.03 -0.03 0.22 0.67 0.23 -0.34 1.12 0.28 -0.06 0.23 0.25 0.15 0.13 0.53 0.18 0.17 0.16 0.43 0.62 0.54 0.19 0.12 0.17 0.88 -0.02 0.24 -0.4 0.25 -0.47 1.6 0.89 0.07 -1.03 -1.63 -1.26 -0.02 0.16 1.68 -1.13 -1.79 -1.79 -1.79 -1.79 0.11 0.08 0.9 0.43 0.28 -0.36 -0.48 -1.79 -1.79 -1.79 -2.27 -1.84 -1.74 -0.89 -2.25 -2.61 -0.91 -0.91 -1.12 -1.38 -0.21 At3g11950 258755_at
UbiA prenyltransferase family protein 2

polyisoprenoid biosynthesis | biosynthesis of proto- and siroheme | mevalonate pathway
Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Plastoquinone biosynthesis
plastochinone and phylloquinone biosynthesis | plastochinone biosynthesis
3.58 4.73
At3g01440 0.681
oxygen evolving enhancer 3 (PsbQ) family protein, photosystem II oxygen-evolving complex protein; -1.82 -1.82 -1.82 -1.82 -1.82 -1.82 -1.82 -1.82 -1.82 -1.82 -1.82 -1.82 -1.82 -1.82 -1.82 -1.82 -1.82 -1.82 -1.82 -1.82 -1.82 -1.82 -1.82 2.04 0.6 -1.82 -1.82 -1.82 -1.6 -1.82 -1.22 1.57 1.38 1.59 2.11 0.31 1.06 1.1 2.23 2.77 2.43 1.61 0.95 1.32 2.5 2.67 2.64 1.91 1 0.9 1.38 2.22 -1.19 -0.34 1.26 -0.25 1.05 0.59 -0.71 -0.71 -0.83 -1.44 -1.82 -1.82 3.39 2.84 2.86 3.01 2.88 1.95 1.94 1.99 2.24 2.59 3.33 1.52 1.9 2.39 3.45 3.13 2.99 3.01 2.88 2.13 3.05 2.72 0.79 2.88 1.7 -0.55 1.73 -1.82 -0.12 0.12 -1.82 -1.82 -1.82 -1.82 0.04 1.14 -1.82 -1.82 -1.82 1.57 -0.02 0.45 1.76 0.16 1.3 1.12 -0.25 -0.63 -1.09 -0.77 -1.19 -1.61 -0.25 -1.03 -1.14 -1.2 0.63 1.27 0.97 -0.08 0.3 -0.17 1.07 0.6 0.66 0.87 0.61 0.62 1.71 -1.38 0.12 -1.61 -1.82 -1.82 -0.15 0.6 2.19 -1.82 -1.82 -1.82 0.11 -1.82 1.33 -0.64 1.17 0.47 -0.07 -1.39 -1.7 -1.82 -1.65 -1.82 -1.82 -1.82 -1.45 -1.82 -2.17 -2.33 -1.85 -1.85 -1.82 -1.82 -1.82 At3g01440 258956_at
oxygen evolving enhancer 3 (PsbQ) family protein, photosystem II oxygen-evolving complex protein; 4 oxygen evolving complex | photosynthesis, light reaction


Photosystems | Photosystem II | Oxygen-evolving enhancer protein


4.70 5.78
At1g56500 0.680
haloacid dehalogenase-like hydrolase family protein -0.59 -1.02 -0.61 -1.12 -1.26 -1.28 -1.49 -1.01 -1.23 -1.08 -0.06 -0.48 -0.92 -0.15 -1.21 -1.15 -0.99 -1.28 -1.04 -1.14 -0.59 -1.49 -0.54 0.56 0.63 -0.85 -1.13 -0.91 -1.13 -0.78 -0.78 0.84 0.44 0.78 0.99 0.3 0.51 0.4 0.7 0.48 0.91 1.11 0.87 0.68 0.71 0.86 1.08 1.07 0.32 -0.15 0.21 1.91 -0.1 -0.62 1.84 0.45 0.48 0.22 0.4 0.43 -0.01 -0.56 -1.44 -1.4 1.81 1.78 1.71 1.61 1.77 1.64 1.6 1.78 1.87 1.82 1.98 1.3 1.97 1.92 2.12 2.12 2.04 1.7 1.67 1.18 1.74 1.68 0.38 1.14 0.98 0.64 1.75 -2.2 -0.76 -0.68 -1.41 -1.93 -0.55 -1.72 0.43 0.59 -1.92 -1.75 -1.72 0.84 0.83 0.71 0.62 0.42 0.42 0.37 -0.21 -0.33 -0.55 -1.01 -0.79 -1.12 -0.56 -1.25 -1.03 -0.98 -0.35 0.27 0.32 0.47 -0.21 0.03 -0.19 0.06 0.42 0.01 -0.06 0.26 1.62 1.21 -0.49 0.45 -1.37 0.3 -0.49 -0.22 1.38 -0.81 -0.98 -1.59 -1.59 -0.11 1.38 0.85 -0.07 0.6 0.26 -0.72 -0.76 -1.55 -1.56 -1.52 -1.05 -0.91 -1.59 -0.94 -1.14 -1.45 -0.95 -0.95 0.02 -0.31 -0.94 At1g56500 259603_at
haloacid dehalogenase-like hydrolase family protein 2

superpathway of serine and glycine biosynthesis II | cysteine biosynthesis II | glycine biosynthesis I | serine biosynthesis | photorespiration




3.41 4.32
At3g01500 0.680 CA1 carbonic anhydrase 1, chloroplast / carbonate dehydratase 1 -5.34 -5.34 -5.34 -5.34 -5.34 -5.34 -5.34 -5.34 -5.34 -5.34 -5.34 -5.34 -5.34 -5.34 -5.34 -5.34 -5.34 -5.34 -5.34 -5.34 -5.34 -5.34 -5.34 4.46 4.45 -5.34 -5.34 -5.34 -5.34 -5.34 -5.34 4.2 3.47 4.34 4.53 2.96 3.83 4.17 3.9 4.3 4.5 4.28 4.33 4.08 4 4.38 4.51 4.57 3.73 3.91 4.21 4.73 -1.52 2.13 4.78 3.47 2.91 2.74 3.65 3.72 1.91 1.45 -5.34 -5.34 4.67 4.22 4.3 4.5 4.76 4.72 4.63 4.59 4.68 4.55 4.51 4.63 4.86 4.57 4.84 4.97 4.94 4.69 4.76 4.53 5.03 4.92 3.97 3.26 2.9 -2.12 3.59 -3.86 3.49 4.07 -5.34 -5.34 -5.34 -3.4 1.71 2.9 -5.34 -5.34 -3.81 4.96 3.35 1.42 3.48 3.55 1.78 3.82 0.35 -0.97 -0.94 0.33 -3.81 -5.34 1.71 -3.14 -5.34 -5.34 3.18 3.91 3.75 2.81 3.62 2.43 3.8 3.16 3.24 3.54 3.16 2.5 4.51 2.93 1.47 -1.85 -4.68 -4.01 0.56 2.98 4.58 -5.34 -1.86 -5.34 -5.34 -5.34 3.03 -0.55 3.91 3.73 3.18 -5.34 -5.34 -5.34 -5.34 -5.34 -5.34 -5.34 -5.34 -5.34 -5.34 -5.34 -2.97 -2.97 -5.34 -5.34 -4.67 At3g01500 259161_at CA1 carbonic anhydrase 1, chloroplast / carbonate dehydratase 1 6

cyanate degradation Nitrogen metabolism



10.11 10.37
At5g04140 0.679 GLU1 encodes a gene whose sequence is similar to ferredoxin dependent glutamate synthase (Fd-GOGAT). Expression in leaves is induced by light and sucrose. Proposed to be involved in photorespiration and nitrogen assimilation. -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 2.98 3.2 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 3.16 2.14 2.95 3.21 1.87 2.47 2.1 2.31 2.31 2.98 2.96 2.67 2.25 1.97 2.8 3.11 3.1 1.84 2.15 2.69 3.38 0.74 0.06 3.59 2 1.9 2.16 1.49 2.34 2.42 1.79 -0.88 -1.98 3.14 3.23 3.14 3.2 3.46 3.54 3.55 3.66 3.55 3.08 3.41 3.27 3.52 2.95 2.99 3.49 3.69 3.87 3.84 2.89 3.63 3.56 2.24 1.5 1.29 1.3 3.3 -3.71 0.56 -2.17 -3.71 -3.71 -3.71 -3.71 0.42 0.94 -3.71 -3.71 -3.71 2.91 2.22 1.68 1.65 2.06 1.3 1.85 0.64 -0.03 -0.14 0.15 -0.43 -0.26 0.91 0.37 -0.11 0.01 0.99 1.98 1.68 1.6 1.54 1.7 2.02 1.48 1.7 1.57 1.2 1.47 3.22 2.69 -0.19 0.19 -3.27 -1.8 -0.07 1.01 2.82 -3.71 -3.71 -3.71 -3.71 -3.71 2.71 2.21 1.56 2.02 1.75 -2.12 -2.5 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -2.04 -2.04 -3.71 -3.71 -3.71 At5g04140 245701_at GLU1 encodes a gene whose sequence is similar to ferredoxin dependent glutamate synthase (Fd-GOGAT). Expression in leaves is induced by light and sucrose. Proposed to be involved in photorespiration and nitrogen assimilation. 4 photorespiration amino acid metabolism | assimilation of ammonia, metabolism of the glutamate group | nitrogen and sulfur utilization
Nitrogen metabolism



7.25 7.58
At5g59750 0.679
similar to Riboflavin biosynthesis protein ribA (Actinobacillus pleuropneumoniae) -1.14 -1.14 -1.14 -1.14 -1.14 -1.14 -1.14 -1.14 -1.14 -1.14 -1.14 -1.14 -1.14 -1.14 -1.14 -1.14 -1.14 -1.14 -0.96 -1.14 -1.14 -1.14 -1.01 1.44 2 -1.19 -1 -1.02 -0.78 -0.86 -0.81 1.36 0.52 1.84 0.88 0.42 0.74 0.76 0.31 0.59 0.86 0.74 1.06 0.82 0.57 0.62 0.69 0.98 0.75 1.03 1.66 1.84 -0.61 0.54 2.41 0.39 -0.37 -0.26 -0.1 0.67 -0.62 -0.42 -1.63 -1.23 0.54 1.22 1.21 1.48 2.06 2.48 1.96 1.42 1.49 0.91 0.69 2.17 1.47 0.81 0.76 1.61 2.21 1.21 1.09 1.04 1.51 1.35 0.36 0.52 0.65 0.8 1.85 -1.98 -0.2 -1.14 -1.12 -1.36 -0.52 -1.14 0.08 -0.26 -1.14 -1.39 -1.35 0.11 1.3 0.37 0.17 0.73 0.52 0.41 -0.5 -0.38 -0.75 -0.39 -0.42 -0.04 -0.37 -0.36 -0.15 0.04 -0.16 0.63 0.35 0.51 0.44 0.67 -0.16 0.46 0.7 -0.31 -0.02 0.1 1.7 1.41 -0.28 0.68 -0.84 0.46 -0.72 -0.37 1.6 -0.64 -0.59 -1.14 -1.14 -1.14 0.6 0.94 0.39 0 -0.24 -0.93 -0.76 -1.26 -0.99 -1.48 -0.61 -0.62 -0.91 -0.26 -0.63 -1.24 -1.6 -1.6 -1.89 -2.25 0.08 At5g59750 247694_at
similar to Riboflavin biosynthesis protein ribA (Actinobacillus pleuropneumoniae) 2
biosynthesis of vitamins, cofactors, and prosthetic groups riboflavin and FMN and FAD biosynthesis Riboflavin metabolism



3.20 4.74
At4g32260 0.677
ATP synthase family -2.02 -2.21 -1.55 -1.93 -1.81 -1.8 -1.95 -1.99 -2.34 -1.95 -0.63 -1.12 -1.82 -1.9 -2.06 -1.85 -2.09 -2.33 -2.41 -1.47 -2.2 -2.44 -1.75 1.81 1.76 -2.49 -2.68 -3.09 -3 -2.79 -3 1.37 0.79 1.73 1.79 1.02 1.31 1.61 1.4 1.56 1.61 1.41 1.66 1.61 1.47 1.42 1.71 1.64 1.39 1.37 1.49 1.96 -0.05 0.77 2.15 1.5 1.07 1.11 1.29 1.81 0.85 0.87 -1.84 -1.1 1.88 1.61 1.59 1.83 1.92 2 1.94 1.9 1.92 1.85 1.84 1.76 1.93 1.75 1.89 1.93 2.06 1.99 2.02 1.52 2.06 1.96 1.53 1.3 1.12 0.14 1.72 -3.25 0 0.94 -2.12 -2.94 -0.49 -2.23 0.14 0.94 -3.12 -2.66 -2.29 1.95 1.19 1.04 1.08 0.67 0.81 0.9 -0.03 -0.57 -0.37 -0.01 -0.6 -0.43 0.25 -0.34 -0.36 -0.39 0.15 0.75 0.64 0.32 0.91 0.84 1.36 0.67 0.75 0.94 0.46 0.04 1.63 1.02 0.05 -0.01 -1.72 -0.55 -0.32 0.28 1.6 -2.82 -2.57 -2.77 -2.92 -3.43 1.25 0.55 0.85 1.01 0.94 0.19 0.07 -1.27 -1.35 -1.7 -0.82 -1.12 -1.02 -1.77 -1.32 -1.39 -0.73 -0.73 -1.83 -1.99 -0.45 At4g32260 253420_at
ATP synthase family 6
photosynthesis

Photosystems | additional photosystem II components | ATP synthase components


4.75 5.58
At3g54050 0.675
strong similarity to fructose-1,6-bisphosphatase (Brassica napus) -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -0.12 -1.91 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -1.63 -1.81 -3.7 -1.77 3.04 2.65 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 2.18 1.74 2.5 2.74 1.48 2.25 2.45 2.25 2.58 2.42 2.31 2.58 2.47 2.49 2.6 2.64 2.54 2.45 1.67 2.17 3.08 0.05 0.39 3.28 1.95 1.42 1.25 1.69 2.09 0.84 0.6 -3.7 -2.92 3.31 2.87 3.03 3.14 3.24 3.16 3.17 3.2 3.34 3.2 3.25 2.98 3.43 3.42 3.49 3.24 3.38 3.32 3.33 2.47 3.19 3.05 1.05 2.37 2.12 1.22 2.63 -3.7 1.35 -0.68 -3.7 -3.7 -0.46 -3.7 0.95 1.73 -3.7 -3.7 -3.7 2.37 1.7 1.08 1.87 1.48 1.15 1.92 0.43 -0.84 -0.85 -0.35 -1.19 -1.73 -0.25 -1.86 -2.87 -2.74 0.96 1.74 1.59 1.17 1.3 1.08 2.02 0.96 1 1.12 1.34 -0.3 2.8 1.19 0.75 0.48 -1.73 -0.24 0.04 1.38 3.01 -3.7 -3.7 -3.7 -3.7 -3.7 1.52 0.63 2.21 1.8 1.49 -0.18 -0.75 -3.7 -3.7 -3.7 -0.2 -0.47 -3.7 -3.7 -0.53 -1.68 -0.92 -0.92 -3.7 -3.7 -1.54 At3g54050 251885_at
strong similarity to fructose-1,6-bisphosphatase (Brassica napus) 10
C-compound and carbohydrate metabolism | glycolysis and gluconeogenesis | photosynthesis | biogenesis of chloroplast gluconeogenesis | Calvin cycle Glycolysis / Gluconeogenesis | Pentose phosphate pathway | Fructose and mannose metabolism | Carbon fixation Intermediary Carbon Metabolism


6.97 7.19
At3g55330 0.674
photosystem II reaction center PsbP family protein -3.31 -3.31 -3.31 -3.31 -3.31 -3.31 -3.31 -3.31 -3.31 -3.31 -0.45 -1.93 -3.31 -3.31 -3.31 -2.57 -3.31 -2.68 -3.31 -3.31 -3.31 -3.31 -2.43 2.31 2.29 -3.31 -3.31 -3.31 -3.31 -3.31 -3.31 2.44 1 2.25 2.5 1.03 1.6 1.14 1.94 1.64 2.04 1.74 1.67 1.58 1.84 2.17 2 1.76 1.09 1.87 2.61 2.52 -0.02 0.87 2.45 0.84 0.35 0.21 0.33 0.91 -0.84 -1.14 -3.31 -3.31 2.73 2.73 2.74 2.92 3.11 3.02 2.73 2.69 2.64 2.38 2.57 2.72 2.54 2.56 2.86 3.01 3.27 3.19 3.19 2.15 2.81 2.59 1.22 1.63 1.18 -0.75 1.99 -3.3 -0.28 0.87 -2.85 -2.76 -1.43 -3.31 0.85 1.62 -3.31 -3.31 -3.31 1.81 1.01 0.48 2 1.24 -0.27 1.97 0.93 0.74 0.42 0.65 0.39 0.53 0.68 0.33 0.35 0.53 1.45 1.8 1.37 0.74 1.45 1.12 1.98 1.55 1.57 0.95 1.54 1.32 2.06 -0.38 0.45 -0.48 -1.68 -0.54 0.85 1.19 2.74 -2.12 -1.84 -1.54 -1.39 -0.92 1.79 1.08 2.25 1.04 0.91 -0.18 -0.74 -2.63 -3.12 -3.06 -3.31 -3.31 -2.72 -1.2 -3.31 -3.31 -1.09 -1.09 -0.89 -0.75 -0.44 At3g55330 251784_at
photosystem II reaction center PsbP family protein 2
photosynthesis
Photosynthesis Photosystems | additional photosystem II components | psbP family of thylakoid proteins


6.09 6.57
At5g02120 0.673 OHP Encodes a one helix protein homologous to cyanobacterial high-light inducible proteins. The protein is localized to the thylakoid membrane and its transcript is transiently induced by exposure to high light conditions. -2.91 -2.91 -2.91 -2.91 -2.91 -2.91 -2.91 -2.91 -2.91 -2.91 0.04 -1.24 -2.91 -2.91 -2.91 -2.91 -2.91 -2.91 -2.91 -2.91 -2.91 -2.91 -0.02 2.81 2.73 -2.91 -2.91 -2.91 -2.91 -2.91 -2.91 2.64 0.88 2.73 2.52 0.63 1.95 1.71 1.22 1.35 1.79 2.11 2.02 1.74 1.24 1.47 1.9 2 1.84 2.41 2.81 2.25 0.07 2.94 2.74 0.96 -0.2 -0.23 -0.04 1.01 -0.94 -0.92 -2.91 -2.91 1.65 1.83 1.66 1.7 2.29 2.75 2.71 2.95 2.75 2 1.67 2.37 2.54 1.92 1.88 2.13 2.63 3.26 3.25 1.54 2.22 2.17 1.52 1.15 1.5 -0.28 1.78 -2.91 -2.15 -1.98 -2.91 -2.91 -2.91 -2.91 0.79 0.84 -2.48 -2.2 -2.91 1.76 1.39 0.95 1.32 0.82 0.43 1.67 0.4 -0.06 -0.14 0.25 -0.3 0.02 1.09 0.91 0.81 0.76 0.78 1.33 1.32 0.81 1.57 1.77 2.02 1.33 1.63 1.01 1.06 0.96 2.13 0.66 0.46 0.37 -1.48 -0.13 0.25 0.7 2.33 -2.91 -1.81 -2.91 -2.91 -2.91 1.54 0.93 2.06 0.8 0.69 0.22 0.08 -1.19 -1.15 -2.91 -2.91 -2.91 -0.88 -0.23 -2.91 -3.3 -1.29 -1.29 -1.37 -0.91 -0.83 At5g02120 251031_at OHP Encodes a one helix protein homologous to cyanobacterial high-light inducible proteins. The protein is localized to the thylakoid membrane and its transcript is transiently induced by exposure to high light conditions. 8 response to high light intensity photosynthesis | biogenesis of chloroplast

Photosystems | additional photosystem II components | Early light-inducible proteins


5.65 6.56
At5g13730 0.673 SIGD RNA polymerase sigma subunit SigD (sigD) / sigma-like factor (SIG4) -2.29 -2.29 -2.29 -2.29 -2.29 -2.29 -2.29 -2.29 -2.29 -2.29 0.45 -2.29 -2.29 -2.29 -2.29 -2.29 -2.29 -2.29 -2.29 -2.29 -2.29 -2.29 -2.29 2.68 3.45 -2.29 -2.29 -2.29 -2.29 -2.29 -2.29 1.63 1.64 2.35 2.08 0.42 1.12 1.55 2.35 2.13 2.16 1.71 1.33 1.9 2.5 2.48 2.12 1.49 1.39 1.95 1.27 2.06 -1.1 0.51 2.41 1.77 1.04 1.05 -0.36 0.51 0.21 -0.43 -2.29 -2.29 3.25 3.2 2.63 2.87 2.67 2.02 1.73 2.27 2.31 2.87 3.31 1.75 2.42 2.93 3.41 3.23 2.91 2.49 2.37 1.77 2.19 2.06 1.59 2.46 0.84 -1.03 1.6 -2.29 -0.15 -2.29 -2.29 -2.29 -2.29 -2.29 1.27 2.2 -2.29 -2.29 -2.29 1.35 0.94 0.78 1.62 0.91 1.07 1.48 0.08 -0.13 -0.83 -0.74 -1.12 -1.7 -1.45 -2.02 -2.22 -1.98 1.19 1.72 0.95 0.38 0.56 -0.61 0.92 1.65 1.24 0.6 1.05 0.78 1.93 -0.48 -0.78 -2.31 -2.29 -2.29 -0.35 0.71 2.71 -2.29 -2.29 -2.29 -2.29 -2.29 2.1 0.96 1.92 1.09 0.36 -2.29 -2.29 -2.29 -2.29 -2.29 -2.19 -1.09 -2.06 -0.69 -0.9 -2.29 -0.27 -0.27 -1.18 -0.98 -0.13 At5g13730 250255_at SIGD RNA polymerase sigma subunit SigD (sigD) / sigma-like factor (SIG4) 8 transcription initiation


Transcription (chloroplast)


5.17 5.75
At2g01110 0.672 APG2 thylakoid membrane formation protein / cpTatC (APG2); mutant is Albino and pale green; Chloroplast Protein Translocation (tatC) -0.89 -0.69 -0.88 -0.98 -1.02 -1.13 -1.1 -1.01 -1.1 -1.07 -0.93 -1.07 -1.17 -0.99 -1.14 -1.37 -1.3 -1.3 -1.35 -1.3 -1.09 -0.73 -0.89 2.11 1.87 -1.38 -0.95 -1.21 -1.19 -1.12 -1.29 0.72 -0.17 1.11 1.06 0.06 0.46 0.9 0.93 1.03 0.92 0.69 1 1.13 1.09 1.07 0.93 0.85 0.82 1.42 1.33 1.97 -0.57 -0.37 1.51 0.8 0.55 0.28 0.13 0.6 -0.1 -0.24 -0.62 -1.03 1.37 1.12 1.22 1.58 1.58 1.32 1.37 1.5 1.51 1.56 1.53 1.24 1.46 1.45 1.5 1.31 1.47 1.69 1.62 0.75 1.85 1.61 0.34 0.3 -0.24 0.77 1.39 -2.22 0.28 0.15 -1.54 -1.58 -1.3 -1.3 -0.25 0.2 -1.84 -2.6 -1.55 -0.07 0.17 -0.35 0.05 0.2 0.6 0.85 0.02 -0.52 -0.55 -0.41 -0.69 -0.67 -0.3 -0.86 -1.04 -0.93 -0.04 0.35 0.26 0.39 -0.12 0.03 0.01 -0.11 -0.19 -0.77 0.18 -0.45 1.32 1.09 -0.37 0.62 -1.53 -0.42 -0.67 0.01 1.05 -1.3 -1.3 -1.3 -1.3 -1.3 0.18 -0.09 0.35 0.86 0.68 -0.64 -0.76 -1.32 -0.93 -0.93 0.04 0.18 -0.28 -0.87 0.19 0.2 -0.76 -0.76 0.69 0.62 0.45 At2g01110 262202_at APG2 thylakoid membrane formation protein / cpTatC (APG2); mutant is Albino and pale green; Chloroplast Protein Translocation (tatC) 10 thylakoid membrane organization and biogenesis

Folding, Sorting and Degradation | Protein export Pathway for nuclear-encoded, thylakoid-localized proteins | Delta-pH pathway


2.93 4.71
At4g35250 0.672
low similarity to vestitone reductase (Medicago sativa subsp. sativa) -3.04 -3.04 -3.04 -3.04 -3.04 -3.04 -3.04 -3.04 -3.04 -3.04 -1.06 -3.04 -3.04 -3.04 -3.04 -3.04 -3.04 -3.04 -1.93 -2.25 -3.04 -1.9 0.55 3.1 3.29 -2.19 -2.45 -1.99 -3.04 -3.12 -2.04 2.47 0.18 2.89 2.23 0.97 2.04 1.77 1.33 1.08 1.56 2.27 2.18 1.95 1.27 1.21 1.77 2.33 1.63 2.52 2.77 2.7 0.65 0.02 3 1.22 0.02 -0.08 0.55 1.45 -0.12 -0.34 -1 -1.58 2.02 1.77 1.75 1.72 2.16 2.71 2.46 2.79 2.8 2.43 1.88 2.88 3.31 2.78 2.4 2.36 2.83 3.22 3.31 1.69 2.22 2.13 1.37 0.88 1.51 0.42 1.69 -3.23 -0.39 -3.04 -3.04 -3.04 -1.28 -1.45 -0.05 0.43 -1.47 -1.44 -1.37 0.94 1.24 -0.12 1.46 1.19 0.84 1.6 0.47 -0.3 -0.01 0.48 0.19 0.19 0.75 0.53 0.2 0.07 0.85 1.62 1.35 1.2 1.33 1.35 1.68 0.98 1.12 0.1 0.82 0.14 2.66 1.73 1.08 1.41 -1.36 0.77 -0.12 0.51 2.54 -3.04 -3.04 -3.04 -3.04 -3.04 0.56 -0.12 1.79 1.73 1.46 -0.05 -0.27 -2.77 -3.04 -3.04 -3.04 -3.04 -3.04 -1.56 -3.04 -3.04 -1.2 -1.2 -2.58 -2.47 -1.67 At4g35250 253197_at
low similarity to vestitone reductase (Medicago sativa subsp. sativa) 2

lysine biosynthesis I | colanic acid building blocks biosynthesis | galactose degradation I | UDP-glucose conversion | lactose degradation IV




5.86 6.55
At5g24150 0.672 SQP1 squalene monooxygenas gene homolog -1.89 -1.89 -1.89 -1.89 -1.89 -1.89 -1.89 -1.89 -1.89 -1.89 -1.89 -1.89 -1.89 -1.89 -1.89 -1.89 -1.89 -1.89 -1.89 -1.89 -1.89 -1.89 -1.89 2.71 1.09 -1.89 -1.89 -1.89 -1.89 -1.89 -1.89 2.62 -1.35 2.67 1.09 -1.34 1.27 0.66 0.73 1.53 2.41 2.54 1.33 0.41 0.69 2.11 2.61 2.5 0.85 0.8 1.67 2.5 0.01 -0.56 3.03 0.3 -0.46 -0.12 1.97 0.99 -0.87 -0.75 -1.89 -1.89 0.26 -0.26 -0.85 -0.7 0.82 1.97 3.42 3.95 3.07 1.08 0.47 1.62 2.45 0.97 1.56 0.2 1.23 3.32 2.54 1.07 1.94 2.04 0.24 1 0.46 -0.56 2.86 -1.89 1.09 1.68 -1.89 -1.89 -1.89 -1.89 0.81 0.64 -1.89 -1.89 -1.89 0.36 1.58 0.23 0.62 1.46 1.32 -0.28 -1.13 -1.71 -1.95 -1.66 -1.89 -1.89 -1.63 -2.18 -1.89 -1.89 1.05 2.31 2.12 3.47 0.78 1.59 0.27 0.37 1.31 1.51 0.78 1.46 3.68 4.15 -0.73 3.73 0.19 3.49 -0.81 1.21 2.62 -1.89 -1.89 -1.89 -1.89 -1.89 1.45 1.51 0.69 2.09 1.41 -1.89 -1.89 -1.89 -1.89 -1.56 -1.3 -1.24 -0.99 -1.14 -1.12 -1.66 -1.76 -1.76 -1.89 -1.89 2.06 At5g24150 249774_at SQP1 squalene monooxygenas gene homolog 4 sterol biosynthesis
sterol biosynthesis Biosynthesis of steroids | Terpenoid biosynthesis Isoprenoid Biosynthesis in the Cytosol and in Mitochondria | sterol biosynthesis
triterpene, sterol, and brassinosteroid metabolism
4.95 6.34
At1g23310 0.671 GGT1 Glutamate:glyoxylate aminotransferase 1 (GGT1). Identified by cloning the gene that corresponded to a purified protein having glyoxylate aminotransferase activity. Localized to the peroxisome and thought to be involved in photorespiration/ metabolic salvage pathway. -1.66 -1.41 -1.42 -1.74 -1.74 -1.79 -2.19 -1.84 -2.02 -2.06 -0.28 -0.57 -1.14 -1.62 -1.83 -2.31 -2.42 -2.47 -2.58 -1.61 -1.9 -2.24 -1.66 1.73 2.06 -2.09 -2.06 -2.02 -2.06 -2.27 -2.08 1.8 1.11 1.94 1.93 0.8 1.28 1.43 1.17 1.25 1.52 1.5 1.66 1.34 1.13 1.51 1.63 1.64 1.4 1.88 1.79 1.99 0.16 2.02 2.35 1.96 0.41 0.53 1.8 1.98 1.01 0.66 -0.79 -1.68 1.75 1.63 1.7 1.98 2.34 2.5 2.37 2.23 2.16 1.83 1.79 2.2 1.99 1.51 1.49 2.29 2.38 2.12 2.22 1.55 2.12 2.2 2.08 1.61 1.65 1.08 2.16 -2.94 0.36 -1.29 -1.59 -1.98 -1.03 -1.88 1.06 1.3 -2.24 -2.2 -1.77 1.49 1.34 1.63 0.61 0.55 1.15 0.61 -0.78 -1.2 -1.03 -0.93 -1.55 -1.27 -0.3 -1.08 -1.42 -1.07 0.24 0.86 0.51 0.57 0.92 0.78 0.95 0.94 1.02 0.33 0.19 0.27 1.61 1.37 -0.62 0.11 -1.99 -0.53 -0.48 0.27 1.47 -2.64 -2.68 -2.63 -2.7 -2.76 1.89 1.73 0.83 1.26 1.39 -1.87 -2.24 -3.02 -2.8 -2.72 -1.03 -1.34 -1.21 -2.04 -1.38 -1.77 -0.94 -0.94 -2.85 -2.8 -1.77 At1g23310 262988_at GGT1 Glutamate:glyoxylate aminotransferase 1 (GGT1). Identified by cloning the gene that corresponded to a purified protein having glyoxylate aminotransferase activity. Localized to the peroxisome and thought to be involved in photorespiration/ metabolic salvage pathway. 9 alanine transaminase activity | glycine transaminase activity | photorespiration
superpathway of serine and glycine biosynthesis II | alanine biosynthesis II | alanine degradation III | photorespiration Carbon fixation | Glutamate metabolism | Alanine and aspartate metabolism



4.87 5.52
At1g73110 0.671
similar to ribulose bisphosphate carboxylase/oxygenase activase, chloroplast precursor (RuBisCO activase, RA) (Oryza sativa) -0.84 -0.84 -0.84 -0.84 -0.84 -1.09 -0.84 -0.84 -0.84 -0.84 0.05 -0.41 -0.99 -1.1 -1.45 -0.84 -0.84 -0.84 -0.49 -0.57 -0.26 -0.84 -0.84 1.6 1.96 -0.84 -0.84 -0.84 -0.84 -0.84 -0.84 1.67 0.57 1.81 0.57 0.92 0.25 -0.84 0.9 0.81 0.93 1.22 0.81 -0.84 0.96 0.79 0.92 1.15 0.59 0.96 0.43 2.14 -0.08 -0.84 1.75 0.39 0.56 0.18 -0.34 0.37 -0.11 0.13 -1 -0.36 1.55 1.95 1.59 1.67 2 2.09 1.8 1.72 1.65 1.13 1.36 1.72 1.83 1.45 1.51 1.92 2.22 2.08 1.51 1.24 1.76 1.66 -0.84 0.39 -0.84 -0.16 1.27 -1.15 -0.84 0.21 -0.84 -0.84 -0.84 -0.84 -0.84 -0.84 -0.84 -0.84 -0.84 -0.84 0.54 -0.56 -0.02 0.72 -0.62 0.88 -0.4 -0.78 -0.7 -0.6 -0.83 -1.36 -0.31 -1.4 -1.25 -1.69 0.11 0.72 0.4 0.01 -0.34 -0.4 0.37 -0.36 0.08 -0.69 0.04 -0.84 1.18 -0.62 -0.46 -1.1 -1.07 -0.84 -0.13 0.28 1.75 -0.84 -0.84 -0.84 -0.84 -0.84 0.84 -0.32 0.77 -0.53 -0.84 -0.84 -0.84 -0.84 -0.84 -0.84 -0.84 -0.84 -0.84 -0.28 -0.84 -0.84 -0.37 -0.37 -0.27 -0.38 -0.25 At1g73110 262377_at
similar to ribulose bisphosphate carboxylase/oxygenase activase, chloroplast precursor (RuBisCO activase, RA) (Oryza sativa) 4



Intermediary Carbon Metabolism


2.90 3.91
At3g12780 0.671 PGK1 phosphoglycerate kinase, putative -1.36 -1.47 -1.13 -1.01 -0.95 -1.01 -0.79 -0.98 -0.98 -0.93 -1.13 -0.9 -0.97 -0.97 -1.05 -1.03 -1.15 -1.32 -1.35 -1.51 -1.59 -2.66 -1.95 1.64 1.13 -1.73 -2.02 -2.45 -2.56 -2.45 -2.25 1.35 0.63 1.25 1.83 1.05 1.12 1.12 1.17 1.26 1.34 1.13 1.41 1.2 1.11 1.28 1.54 1.61 1.05 0.86 1.25 1.93 0.2 0.06 1.37 0.89 0.65 0.59 0.86 1.12 0.63 0.6 -1.93 -1.02 1.92 1.67 1.78 1.84 1.95 1.8 1.83 1.88 1.95 1.84 1.95 1.9 1.98 2 2.06 2.16 2.17 2.25 2.29 1.88 2.2 2.06 0.9 1.37 1.03 -0.32 1.2 -1.97 -0.1 -0.41 -2.02 -2.41 -1.02 -2.02 -0.16 0.9 -2.12 -1.91 -1.96 1.12 0.62 0.5 1.17 0.84 0.46 0.95 0.28 -0.39 -0.37 -0.19 -0.5 -0.77 -0.03 -0.04 -0.67 -0.71 0.28 0.8 0.61 0.33 0.47 0.34 1.22 0.44 0.75 -0.01 0.35 -0.1 1.44 0.36 0.42 0.11 -1.21 -0.41 -0.26 0.47 1.54 -2.02 -1.56 -3.02 -2.91 -3.51 0.74 -0.02 1.01 0.76 0.57 0.32 -0.1 -1.34 -1.91 -1.88 -1.93 -1.49 -1.49 -1.81 -1.64 -1.88 -0.95 -0.95 -3.05 -2.89 -1.29 At3g12780 256228_at (m) PGK1 phosphoglycerate kinase, putative 4
C-compound and carbohydrate metabolism | glycolysis and gluconeogenesis | photosynthesis gluconeogenesis | glycerol degradation II | Calvin cycle | sorbitol fermentation | fructose degradation (anaerobic) | acetate fermentation | glycolysis I | glyceraldehyde 3-phosphate degradation | glycolysis IV Glycolysis / Gluconeogenesis | Carbon fixation Intermediary Carbon Metabolism


4.41 5.80
At1g03130 0.670
photosystem I reaction center subunit II, chloroplast, putative -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -1.12 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -0.92 -3.7 2.58 2.84 -3.11 -3.7 -3.7 -2.72 -2.58 -2.92 1.53 0.55 2.94 2.89 0.88 2.52 3.03 2.54 1.32 1.92 2.67 3.1 2.89 2.44 1.29 2.18 2.77 2.65 1.38 2.41 3.08 0.03 2.06 3.49 2.98 -0.06 0.95 2.25 2.71 0.16 0.71 -1.6 -1.35 1.88 1.67 1.17 0.55 1.79 2.54 2.41 2.77 3.1 3.04 1.8 2.56 3.36 3.25 2.16 0.73 2.59 2.59 2.85 2.36 2.82 2.9 2.29 1.77 2.56 0.39 2.68 -3.7 2 1.29 -3.7 -3.7 -0.19 -3.7 1.4 2.49 -3.7 -3.7 -3.7 2.94 2.58 1.56 1.92 1.67 0.96 2.16 0.66 -0.37 0.02 0.66 -0.14 -0.31 0.76 0 -0.36 -0.31 0.98 1.33 0.76 0.43 1.42 0.69 1.74 1.63 1.6 1.78 1.05 0.85 2.04 0.05 0.9 0.43 -1.57 -0.68 -0.65 0.84 2.69 -3.7 -3.7 -3.7 -3.7 -3.7 1.17 0.28 2.23 1.51 1.5 0.99 -0.04 -0.67 -1.84 -1.65 -1.05 -0.95 -2.54 -3.7 -0.68 -2.5 -1.62 -1.62 -3.7 -3.7 -3.7 At1g03130 263114_at
photosystem I reaction center subunit II, chloroplast, putative 4


Photosynthesis Photosystems | Photosystem I | photosystem I reaction center


6.67 7.19
At3g18890 0.669
similar to UV-B and ozone similarly regulated protein 1 UOS1 (Pisum sativum) -0.88 -2.21 -2.21 -2.21 -2.21 -2.21 -2.21 -2.21 -2.21 -2.21 0.04 -1.39 -2.21 -2.21 -1.01 -2.21 -2.21 -0.76 -0.19 -2.21 -0.61 -2.21 -1.88 2.08 1.21 -2.21 -2.21 -2.21 -2.21 -2.21 -2.21 1.09 0.27 1.31 1.85 1.01 1.58 1.83 1.88 1.64 1.33 1.64 1.97 2.04 1.91 1.65 1.65 1.84 1.25 0.03 1.08 2.62 0.05 -1.14 3.09 1.49 0.89 1.08 1.24 1.61 0.8 0.45 -1.74 -1.14 2.43 2.04 2.12 1.84 1.72 1.95 1.83 2.1 2.42 2.44 2.43 1.57 2.59 2.67 2.65 1.92 1.84 2.78 2.65 1.92 2.62 2.27 1.25 1.36 1.34 -1.17 0.84 -2.33 0.38 -2.21 -2.21 -2.21 -0.23 -2.21 0.57 1.71 -2.21 -2.21 -2.21 1.85 0.34 -0.1 1.81 0.35 -0.14 1.47 0.38 -0.27 -0.05 0.4 -0.36 -0.24 0.49 -0.02 -0.26 -0.1 0.72 0.92 0.82 0.08 1.05 0.67 1.84 0.83 0.77 0.82 0.9 0.91 1.6 -1.01 0.13 -1.27 -1.59 -1.7 0.1 0.61 2.42 -2.21 -1.83 -2.21 -2.21 -2.21 0.72 -1.19 1.21 0.47 0.11 -0.55 -1.59 -2.21 -2.21 -2.21 -2.21 -2.21 -2.21 -2.21 -2.21 -2.21 -1.33 -1.33 -2.21 -2.21 -2.06 At3g18890 256655_at
similar to UV-B and ozone similarly regulated protein 1 UOS1 (Pisum sativum) 4



Chloroplastic protein import via envelope membrane | Tic apparatus


4.65 5.42
At5g57040 0.669
lactoylglutathione lyase family protein / glyoxalase I family protein -1.53 -2.92 -1.35 -1.93 -2.1 -2.34 -2.12 -3.27 -2.37 -1.98 -0.32 -1.75 -2.04 -2.92 -2.92 -2.92 -2.92 -3.13 -2.92 -2.62 -1.72 0.09 -2.59 2.15 2.19 -1.71 -1.62 -1.83 -1.64 -2.92 -2.34 1.45 0.52 1.84 1.85 0.44 1.75 1.97 1.37 1.37 1.44 1.88 1.92 1.88 1.37 1.51 1.68 1.83 1.97 1.01 1.22 2.41 0.08 2.06 3.12 1.97 0.53 0.69 1.65 1.98 0.75 0.7 0.03 -1.13 1.57 1.41 1.36 1.19 1.37 1.79 2.16 2.29 2.44 2.4 1.97 1.33 2.12 1.94 1.29 0.95 1.42 2.49 2.44 1.04 1.76 1.9 1.46 2.16 2.31 1.25 2.14 -1.77 -1.19 0.25 -1.54 -1.64 -0.2 -2.92 0.41 0.86 -1.06 -0.76 -2.61 1.09 1.14 1.34 0.37 0.92 1.86 -0.33 -1.2 -2.04 -1.26 -1.32 -1.75 -1.83 -0.53 -1.22 -1.91 -1.97 -1.1 0.1 0.09 0.78 0.4 0.44 0.5 0.31 0.65 0.13 -0.04 -0.5 2.19 2.1 -1.45 0.81 -0.35 0.28 -0.97 -0.38 1.13 -2.92 -2.92 -1.09 -1.83 -2.92 1.26 1.1 0.49 1.35 1.21 -1.18 -0.62 0.12 0.43 0.39 -0.15 -0.47 -0.52 -1.39 -0.03 -1.24 -2.06 -2.06 -1.38 -1.43 -1.31 At5g57040 247931_at
lactoylglutathione lyase family protein / glyoxalase I family protein 2

threonine degradation | methylglyoxal degradation




5.11 6.40
At4g10120 0.668
similar to sucrose-phosphate synthase (Zea mays) -2.86 -2.86 -2.86 -2.86 -2.86 -2.86 -2.86 -2.86 -2.86 -2.86 -2.86 -2.86 -2.86 -2.86 -2.86 -2.86 -2.86 -2.86 -2.86 2.12 2.19 2.04 -2.86 3.52 2.86 -2.86 -2.86 -2.86 -2.86 -2.86 -2.86 2.71 2.96 3.62 2.62 1.06 1.6 0.28 0.44 1.58 2.69 2.44 1.03 0.37 1.03 2.45 2.52 2.29 0.69 -0.05 1.12 3.81 -2.74 0.26 2.18 0.34 1.64 0.77 -0.77 0.02 2 0.76 1.11 -0.79 3.66 3.54 3.13 3.4 3.88 3.59 3.37 4.18 3.95 3.26 3.78 2.09 2.62 1.35 2.67 3.29 3.39 4.18 4.22 1.12 3.05 3.24 1.12 3.2 3.09 2.54 3.75 -2.86 -0.12 -0.75 -2.86 -1.48 -2.86 -2.86 0.34 -2.86 -1.25 -1.34 -2.2 -0.75 -0.28 0.21 -0.97 -0.79 1.12 -1.72 -2.86 -2.86 -2.86 -2.86 -2.86 -2.86 -2.34 -2.86 -2.86 -2.86 -0.45 1.8 2.22 1.99 0.94 0.32 -0.83 -0.14 1.23 1.15 1.35 0.82 3.97 4.19 -0.65 2.64 3.31 1.93 -2.59 -1.26 -0.78 -2.86 -2.86 -2.86 -2.86 -2.86 3.2 2.18 0.73 2.37 2.09 0.22 0.49 -0.13 0.12 -0.02 -2.86 -2.86 -2.86 -2.86 -2.86 -2.86 -2.46 -2.46 -2.86 -2.86 -2.86 At4g10120 255016_at
similar to sucrose-phosphate synthase (Zea mays) 4
C-compound and carbohydrate metabolism | glycolysis and gluconeogenesis | metabolism of energy reserves (e.g. glycogen, trehalose) | photosynthesis sucrose biosynthesis




6.63 7.08
At5g42310 0.668
pentatricopeptide (PPR) repeat-containing protein -0.77 -1.58 -1.25 -1.51 -0.91 -0.54 -0.95 -0.94 -0.72 -1.21 0.77 0.05 -0.47 -0.23 -0.69 -0.54 -0.07 -1.25 -0.73 -1.13 -0.41 -1.15 -0.78 1.15 1.17 -1.39 -1.8 -1.12 -1.36 -1.47 -1.94 0.98 0.26 1.34 0.78 0.2 0.91 0.84 0.96 1.07 1.28 1.19 1 1.01 0.92 1.2 1.33 0.9 0.57 0.18 0.72 1.17 -0.74 -0.74 1.84 0.85 0.69 0.4 0.14 0.43 0.52 -0.07 -1.1 -0.75 1.64 1.46 1.2 1.34 1.57 1.44 1.1 1.63 1.79 1.47 1.49 0.87 1.53 1.37 1.48 1.4 1.36 1.22 1.27 0.43 1.04 0.91 0.48 0.86 0.7 0.48 1.31 -2.18 -0.95 -1.47 -1.35 -1.52 0.04 -1.47 0.46 0.76 -1.6 -1.42 -1.37 0.71 0.37 0.42 0.06 0.01 0.72 0.59 -0.1 -0.23 -0.43 -0.33 -0.43 -0.21 -0.3 -0.56 -0.56 -0.2 -0.04 0.22 0.1 -0.05 -0.07 0.02 0.17 0.01 -0.07 0.36 -0.01 -0.11 0.83 0.11 -0.38 -0.25 -1.67 -0.69 -0.4 -0.25 1.02 -1.47 -1.47 -1.33 -1.47 -1.47 0.76 0.57 -0.12 0.23 -0.14 -0.75 -0.87 -1.06 -0.78 -1.03 -0.61 -0.53 -0.62 -0.11 -0.83 -1.37 -0.82 -0.82 0.46 0.17 -0.12 At5g42310 249247_at
pentatricopeptide (PPR) repeat-containing protein 2



mRNA processing in chloroplast


2.94 4.01
At3g59400 0.667 GUN4 GUN, genomes uncoupled, is necessary for coupling the expression of some nuclear genes to the functional state of the chloroplast. Binds to the magnesium chelatase complex and promotes formation of the substrate,a tetrapyrrole signaling molecule. -4.19 -4.19 -4.19 -4.19 -4.19 -4.19 -4.19 -4.19 -4.19 -4.19 -0.47 -4.19 -4.19 -4.19 -4.19 -4.19 -4.19 -4.19 -4.19 -4.19 -4.19 -4.19 -4.19 2.97 2.96 -4.19 -4.19 -4.19 -4.19 -4.19 -4.19 3.81 0.94 3.92 2.99 2.09 3.41 3.17 2.08 2.33 3.07 3.31 3.59 3.11 2.2 2.31 3.15 3.4 3.1 2.6 3.94 2.9 1.4 0.92 4.13 2.84 -0.35 0.31 1.43 2.64 -1.53 -0.34 -4.19 -1.24 1.75 1.81 0.94 2.15 3.25 3.84 3.85 4.28 4.09 2.72 1.54 2.94 3.3 1.73 1.25 1.53 2.92 3.86 4.13 2.22 2.49 2.36 2.86 -0.09 1.95 -1.29 2.66 -4.19 0.81 0.46 -4.19 -4.19 0.69 -4.19 1.79 2.38 -4.19 -4.19 -4.19 1.57 2.91 1.15 1.95 2.44 0.89 2.56 2.02 1.49 2.04 2.17 1.95 2.02 2.27 1.87 1.53 1.56 1.92 2.06 1.45 1.37 2.17 1.91 2.97 1.85 1.75 1.15 1.97 2.24 1.82 -0.28 0.7 -0.52 -3.69 -3.24 0.97 1.69 3.07 -4.19 -4.19 -4.19 -4.19 -4.19 2.27 1.05 3.01 2.22 1.63 2.09 1.32 -0.48 -4.19 -4.19 -4.19 -4.19 -4.19 -4.19 -4.19 -4.19 -2.18 -2.18 -2.59 -4.19 -0.93 At3g59400 251519_at GUN4 GUN, genomes uncoupled, is necessary for coupling the expression of some nuclear genes to the functional state of the chloroplast. Binds to the magnesium chelatase complex and promotes formation of the substrate,a tetrapyrrole signaling molecule. 10 enzyme binding | tetrapyrrole binding | chloroplast-nucleus signaling pathway | positive regulation of enzyme activity


Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Regulatory enzymes


8.02 8.47
At3g63140 0.667
similar to mRNA binding protein precursor (Lycopersicon esculentum) -1.94 -2.49 -2.74 -4.46 -2.04 -2.24 -2.48 -2.34 -1.79 -2.59 -0.85 -0.33 -2.02 -2.27 -2.61 -3.38 -4.46 -3.32 -2.49 -1.04 -1.93 -4.46 -1.7 3.41 3.1 -4.46 -4.46 -4.46 -4.46 -4.46 -4.46 2.8 1.21 2.85 3.06 1.61 2.56 2.56 2.54 2.5 2.6 2.8 2.82 2.75 2.59 2.58 2.94 3.03 2.33 1.55 2.41 3.69 0.74 0.05 3.84 2.54 1.99 1.79 2.31 2.81 0.78 0.4 -4.46 -4.46 3.47 3.15 3.28 3.28 3.54 3.49 3.33 3.45 3.49 3.45 3.39 3.66 3.83 3.81 3.93 3.93 4.05 3.9 3.88 3.11 3.82 3.68 2.11 2.4 2.31 -0.13 2.7 -4.46 0.54 0.16 -4.46 -4.46 -0.96 -4.46 0.59 2.08 -4.46 -4.46 -4.46 2.48 1.77 1.61 2.75 1.85 0.56 2.06 0.35 -0.39 -0.5 -0.16 -1.35 -1.37 0.64 -0.65 -1.45 -0.84 1.51 2.37 1.91 1.33 1.82 1.58 2.71 1.56 1.87 1.13 1.5 0.75 3.09 1.36 0.42 0.41 -1.91 -0.69 0.66 1.57 3.51 -4.46 -3.3 -4.46 -4.46 -4.46 1.93 -0.05 2.5 1.63 0.91 -3.55 -4.46 -4.46 -4.46 -4.46 -4.46 -4.46 -4.46 -4.46 -4.46 -4.46 -2.7 -2.7 -4.46 -4.46 -4.46 At3g63140 251157_at
similar to mRNA binding protein precursor (Lycopersicon esculentum) 2
biogenesis of chloroplast colanic acid building blocks biosynthesis | dTDP-rhamnose biosynthesis | galactose degradation I | UDP-glucose conversion | lactose degradation IV




8.24 8.51
At1g62750 0.666
elongation factor Tu family protein -1.48 -2.24 -1.89 -1.8 -1.83 -1.76 -1.7 -1.59 -1.56 -1.8 -1.6 -1.77 -2.42 -2.09 -1.81 -1.24 -1.3 -1.4 -1.57 -1.57 -2.41 -2.02 0.25 2.46 2.34 -2.09 -2.41 -2.41 -2.27 -2.56 -2.5 2.25 0.87 2.45 1.82 0.93 1.42 1.17 1.4 1.55 1.89 1.86 1.58 1.22 1.43 1.8 1.97 1.98 1.02 1.88 2.11 2.06 0.02 -0.04 1.9 0.44 0.67 0.69 0.09 0.26 0.13 -0.36 -1.66 -1.84 2.12 1.9 1.99 1.99 2.25 2.41 2.35 2.46 2.39 2.02 2.11 2.15 2.45 2.11 2.21 2.19 2.37 2.76 2.8 1.38 2.06 1.9 0.95 1.58 1.34 1.08 1.77 -3.52 -0.57 -2.17 -2.94 -3.5 -0.72 -2.04 0.28 0.8 -2.76 -2.21 -2.11 0.88 0.25 -0.09 1.12 0.09 0.08 1.6 0.84 -0.26 -0.3 0.01 -0.22 -0.57 0.16 -0.39 -0.65 -0.57 0.35 0.73 0.87 0.39 0.46 0.47 1.04 0.6 0.88 0.54 0.54 0.79 1.65 0.95 -0.07 0.03 -1.95 -1.05 -0.16 0.49 1.96 -2.31 -2.49 -3.39 -3.39 -3.39 1.01 0.47 0.9 0.9 0.54 -1.18 -1.64 -2.77 -2.76 -3.14 -2.41 -2.54 -0.67 0.91 -2.58 -1.91 -0.49 -0.49 0.39 0.06 0.33 At1g62750 262645_at
elongation factor Tu family protein 2


Translation factors



5.13 6.32


























































































































































































page created by Vincent Sauveplane 05/24/06