Co-Expression Analysis of: CYP71B36 (At3g26320) Institut de Biologie Moléculaire des Plantes















































































































































































































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Stress Data Set save / view heatmap as: OpenOffice Table annotation details for co-expressed genes can be found to the right of the heatmap

















































































































































































































































MS Excel table





















































































































































































































































save / view all data as: Tab delimited table For further information on the experiments please go to the Genevestigator database using the experiment-ID given in brackets.


















































































































































































































































shown are a maximum of 50 genes with r>0.5 (If more co-expressed genes with r>0.5 exist, they can be saved as Tab delimited data only) magnitude of change [log2(treatment / control)]    0   0.3   0.6   0.9  1.2   1.5   1.8   2.1   2.4   2.7   >3











































































































































































































































greater than zero                                                         















































































































































































































































less than zero                                                         















































































































































































































































Locus r-value Name Description Agrobacterium tumefaciens, tumor at stem (8) Myzus persicae, 8h, leaf (82) Gigaspora rosea, 3d, roots (23) Heterodera schachtii, 21d, roots (24) Pseudomonas syringae hrpA, 2h, Col5 leaf (71) P. syringae DC3000 avrRpm1, 4h, Col5 leaf (71) P. syringae DC3000, 4h, Col5 leaf (71) P. syringae hrpA, 4h, Col5 leaf (71) P. syringae DC3000, 12h, Col5 leaf (71) P. syringae hrpA, 12h, Col5 leaf (71) P. syringae DC3000, 2h, Col leaf (106) P. syringae DC3000, 6h, Col leaf (106) P. syringae DC3000, 24h, Col leaf (106) P. syringae avrRpm1, 2h, Col leaf (106) P. syringae avrRpm1, 6h, Col leaf (106) P. syringae avrRpm1, 24h, Col leaf (106) P. syringae HrcC, 2h, Col leaf (106) P. syringae HrcC, 6h, Col leaf (106) P. syringae HrcC, 24h, Col leaf (106) P. syringae pv. phaseolicola, 2h, Col leaf (106) P. syringae pv. phaseolicola, 6h, Col leaf (106) P. syringae pv. phaseolicola, 24h, Col leaf (106) P. syringae, resistant, 4h, Col leaf, uninfected half (148) P. syringae, resistant, 8h, Col leaf, uninfected half (148) P. syringae, resistant, 16h, Col leaf, uninfected half (148) P. syringae, resistant, 24h, Col leaf, uninfected half (148) P. syringae, resistant, 48h, Col leaf, uninfected half (148) P. syringae, susceptible, 4h, Col leaf, uninfected half (148) P. syringae, susceptible, 8h, Col leaf, uninfected half (148) P. syringae, susceptible, 16h, Col leaf, uninfected half (148) P. syringae, susceptible, 24h, Col leaf, uninfected half (148) P. syringae, susceptible, 48h, Col leaf, uninfected half (148) Erysiphe cichoracearum race UCSC, Col leaf (85) E. cichoracearum, 3h, Col leaf (86) E. cichoracearum, 10h, Col leaf (86) E. orontii, 6h, Col leaf (146) E. orontii, 12h, Col leaf (146) E. orontii, 18h, Col leaf (146) E. orontii, 24h, Col leaf (146) E. orontii, 48h, Col leaf (146) E. orontii, 72h, Col leaf (146) E. orontii, 96h, Col leaf (146) E. orontii, 120h, Col leaf (146) Botrytis cinerea, 18h, Col leaf (147) B. cinerea, 48h, Col leaf (147) Peronospora parasitica, resistant, 72h (72) P. parasitica, susceptible, 72h (72) Phytophtora infestans, 6h, Col seedling (108) P. infestans, 12h, Col seedling (108) P. infestans, 24h, Col seedling (108) elicitor flg22, Ler seedling (81) elicitor, control MgCl2, 1h, Col leaf (107) elicitor, control MgCl2, 4h, Col leaf (107) elicitor, GST, 1h, Col leaf (107) elicitor, GST, 4h, Col leaf (107) elicitor, hrpZ, 1h, Col leaf (107) elicitor, hrpZ, 4h, Col leaf (107) elicitor, GST NPP1, 1h, Col leaf (107) elicitor, GST NPP1, 4h, Col leaf (107) elicitor, flg22, 1h, Col leaf (107) elicitor, flg22, 4h, Col leaf (107) elicitor, LPS, 1h, Col leaf (107) elicitor, LPS, 4h, Col leaf (107) wounding, 15min, leaf (127) wounding, 30 min, leaf (127) wounding, 1h, leaf (127) wounding, 3h, leaf (127) wounding, 6h, leaf (127) wounding, 12h, leaf (127) wounding, 24h, leaf (127) wounding, 15min, root (127) wounding, 30 min, root (127) wounding, 1h, root (127) wounding, 3h, root (127) wounding, 6h, root (127) wounding, 12h, root (127) wounding, 24h, root (127) ozone, 1h, seedling (25) oxidative stress (paraquat), 30min, leaf (126) oxidative stress (paraquat), 1h, leaf (126) oxidative stress (paraquat), 3h, leaf (126) oxidative stress (paraquat), 6h, leaf (126) oxidative stress (paraquat), 12h, leaf (126) oxidative stress (paraquat), 24h, leaf (126) oxidative stress (paraquat), 30min, root (126) oxidative stress (paraquat), 1h, root (126) oxidative stress (paraquat), 3h, root (126) oxidative stress (paraquat), 6h, root (126) oxidative stress (paraquat), 12h, root (126) oxidative stress (paraquat), 24h, root (126) genotoxic stress (bleomycin), 30min, leaf (126) genotoxic stress (bleomycin), 1h, leaf (126) genotoxic stress (bleomycin), 3h, leaf (126) genotoxic stress (bleomycin), 6h, leaf (126) genotoxic stress (bleomycin), 12h, leaf (126) genotoxic stress (bleomycin), 24h, leaf (126) genotoxic stress (bleomycin), 30min, root (126) genotoxic stress (bleomycin), 1h, root (126) genotoxic stress (bleomycin), 3h, root (126) genotoxic stress (bleomycin), 6h, root (126) genotoxic stress (bleomycin), 12h, root (126) genotoxic stress (bleomycin), 24h, root (126) osmotic stress (mannitol), 30min, leaf (126) osmotic stress (mannitol), 1h, leaf (126) osmotic stress (mannitol), 3h, leaf (126) osmotic stress (mannitol), 6h, leaf (126) osmotic stress (mannitol), 12h, leaf (126) osmotic stress (mannitol), 24h, leaf (126) osmotic stress (mannitol), 30min, root (126) osmotic stress (mannitol), 1h, root (126) osmotic stress (mannitol), 3h, root (126) osmotic stress (mannitol), 6h, root (126) osmotic stress (mannitol), 12h, root (126) osmotic stress (mannitol), 24h, root (126) salt (NaCl), 30min, leaf (126) salt (NaCl), 1h, leaf (126) salt (NaCl), 3h, leaf (126) salt (NaCl), 6h, leaf (126) salt (NaCl), 12h, leaf (126) salt (NaCl), 24h, leaf (126) salt (NaCl), 30min, root (126) salt (NaCl), 1h, root (126) sal (NaCl), 3h, root (126) salt (NaCl), 6h, root (126) salt (NaCl), 12h, root (126) salt (NaCl), 24h, root (126) drought (excised leaves, laminar air flow), 2 h, leaf (58) drought (15 min dry air, then closed vessels ), 15min, leaf (126) drought (15 min dry air, then closed vessels ), 30min, leaf (126) drought (15 min dry air, then closed vessels ), 1h, leaf (126) drought (15 min dry air, then closed vessels ), 3h, leaf (126) drought (15 min dry air, then closed vessels ), 6h, leaf (126) drought (15 min dry air, then closed vessels ), 12h, leaf (126) drought (15 min dry air, then closed vessels ), 24h, leaf (126) drought (15 min dry air, then closed vessels ), 15min, root (126) drought (15 min dry air, then closed vessels ), 30min, root (126) drought (15 min dry air, then closed vessels ), 1h, root (126) drought (15 min dry air, then closed vessels ), 3h, root (126) drought (15 min dry air, then closed vessels ), 6h, root (126) drought (15 min dry air, then closed vessels ), 12h, root (126) drought (15 min dry air, then closed vessels ), 24h, root (126) freezing, recovery, 3h, leaf (58) freezing, recovery, 24h, leaf (58) cold (4°C), seedling (76) cold (4°C), 24h, (58) cold (4°C), 30min, leaf (126) cold (4°C), 1h, leaf (126) cold (4°C), 3h, leaf (126) cold (4°C), 6h, leaf (126) cold (4°C), 12h, leaf (126) cold (4°C), 24h, leaf (126) cold (4°C), 30min, root (126) cold (4°C), 1h, root (126) cold (4°C), 3h, root (126) cold (4°C), 6h, root (126) cold (4°C), 12h, root (126) cold (4°C), 24h, root (126) heat (30°C), 1h, seedling (59) heat (40°C), 1h, seedling (59) heat (55°C), 10min, 1h recovery, suspension cell (26) heat (38°C), 15min, leaf (126) heat (38°C), 30min, leaf (126) heat (38°C), 1h, leaf (126) heat (38°C), 3h, leaf (126) heat (38°C), 3h, 1h recovery, leaf (126) heat (38°C), 3h, 3h recovery, leaf (126) heat (38°C), 3h, 9h recovery, leaf (126) heat (38°C), 3h, 21h recovery, leaf (126) heat (38°C), 15min, root (126) heat (38°C), 30min, root (126) heat (38°C), 1h, root (126) heat (38°C), 3h, root (126) heat (38°C), 3h, 1h recovery, root (126) heat (38°C), 3h, 3h recovery, root (126) heat (38°C), 3h, 9h recovery, root (126) heat (38°C), 3h, 21h recovery, root (126) heat (38°C), 15min, suspension cell (126) heat (38°C), 30min, suspension cell (126) heat (38°C), 1h, suspension cell (126) heat (38°C), 3h, suspension cell (126) heat (38°C), 3h, 1h recovery, suspension cell (126) heat (38°C), 3h, 3h recovery, suspension cell (126) heat (38°C), 3h, 9h recovery, suspension cell (126) heat (38°C), 3h, 21h recovery, suspension cell (126) UV-B, 15min, leaf (126) UV-B, 30min, leaf (126) UV-B, 1h, leaf (126) UV-B, 3h, leaf (126) UV-B, 6h, leaf (126) UV-B, 12h, leaf (126) UV-B, 24h, leaf (126) UV-B, 15min, root (126) UV-B, 30min, root (126) UV-B, 1h, root (126) UV-B, 3h, root (126) UV-B, 6h, root (126) UV-B, 12h, root (126) UV-B, 24h, root (126) high light, leaf (95) low light, leaf (95) low light, 3h, petiole (13) Cs, 7d, leaf (97) bleomycin, 3d, whole plant (57) Norfluazone, whole seedling (98) Zn, whole rosette, A. halleri (101) Zn, whole roots, A_halleri (101) Zn, whole rosette, A. petrea (101) Zn, whole roots, A. petrea (101) zearalenone (c2t), 14d, seedlings (103) zearalenone (c4t), 14d, seedlings (103) Cs, 7d, root (97) t-zeatin, seedling (115) fumomisin, protoplast (62) syringolin, 10h, leaf (86) isoxaben, suspension cell (10) Locus Probeset Name Description Annotation score GO.keywords FunCat keywords AraCyc annotations KEGG annotations BioPath annotations AcylLipid category Literature annotations Gene family 90% quantile of DE max. DE




















At3g26320 1.000 CYP71B36 cytochrome P450 family protein -2.25 0.65 0.26 0.26 -0.66 -1.64 -1.64 -1.64 -2.72 -0.02 -0.75 -1.2 -3.46 -0.75 -1.98 -1.88 0.2 0.77 0.27 -0.25 -1.42 0.53 1.08 -0.01 0.27 0.06 0.75 0.23 -0.38 0.1 -0.19 0.94 0.97 0 -0.59 0.38 0.48 0.37 0.53 1.35 1.26 1.64 1.75 -0.04 -1.56 0.21 -1.34 0.48 0.46 1.48 0.25 0.26 -0.08 0.26 0.2 0.26 -1.28 0.26 -0.52 0.26 -0.84 0.26 0.01 -0.08 -0.3 -2.44 -0.1 0.62 0.61 1.32 0.26 0.26 0.26 0.24 0.26 0.26 0.26 0.26 -0.1 -0.34 -0.06 0.71 0.22 0.06 0.26 0.26 0.26 0.26 0.26 0.26 -0.18 -0.28 0.26 1.01 0.78 0.77 0.26 0.26 0.26 0.26 0.26 0.26 1.17 0.21 -1.06 -1.81 -2.52 -2.78 0.26 0.26 0.26 0.26 0.26 0.26 0.43 0.12 -1.91 -0.87 -1.81 -1.39 0.26 0.26 0.26 0.26 0.26 0.26 0.23 0.63 -0.23 -0.02 -0.16 0.03 0.82 0.03 0.26 0.26 0.26 0.26 0.26 0.26 0.26 -1.96 -1.87 -0.42 -1.14 0.76 0.39 0.7 0.56 -1.6 -2.78 0.26 0.26 0.26 0.26 0.26 0.26 -0.67 -0.67 0.26 0.47 -0.2 0 -0.91 -0.5 -0.11 0.55 0.42 0.56 0.26 0.26 0.26 0.49 0.26 0.26 0.26 0.26 0.26 0.26 0.26 0.26 0.26 0.26 0.26 0.26 0.26 0.26 0.26 0.26 0.26 0.26 0.79 1.63 0.13 0.43 0.85 1.35 1.68 0.26 0.26 0.26 0.99 0.26 0.26 -1.38 1.64 0.26 0.26 0.26 0.26 0.26 -0.23 0.26 -2.66 0.26 At3g26320 256874_at CYP71B36 cytochrome P450 family protein 1






cytochrome P450 family 2.99 5.21




















At1g27480 0.644
lecithin:cholesterol acyltransferase family protein / LACT family protein, similar to LCAT-like lysophospholipase (LLPL) (Homo sapiens) -3.09 0.09 0.3 0.3 -1.11 -1.69 -1.69 -0.85 -2.33 -1.08 -0.28 -0.04 -4.13 -0.31 -1.08 -0.97 -0.52 -0.16 -0.34 -0.69 -0.56 -0.59 0.09 -0.15 -0.49 -0.28 0.1 0.18 -0.19 -0.37 -0.56 0 0.26 0.18 -0.3 0.3 0.42 0.51 0.45 0.41 0.22 0.28 0.16 0.07 -1.46 0.26 -0.32 -0.6 -0.51 -0.56 0.16 0.57 0.46 0.19 0.26 -0.33 -0.8 -0.3 -0.72 -0.08 -0.34 0.35 0.13 0.1 0.18 -0.05 0 0.18 0.12 0.43 0.3 0.3 0.3 0.3 0.3 0.3 0.3 -0.82 0.32 0.07 0.43 0.27 0.43 0.38 0.3 0.3 0.3 0.3 0.3 0.3 0.15 0.38 0.56 0.53 0.62 0.56 0.3 0.3 0.3 0.3 0.3 0.3 0.28 0.17 -0.53 -0.93 -1.49 -1.59 0.3 0.3 0.3 0.3 0.3 0.3 0.22 0.32 -0.08 -0.44 -0.46 0.06 0.3 0.3 0.3 0.3 0.3 0.3 0.49 0.68 0.42 0.3 0.31 0.48 0.34 0.42 0.3 0.3 0.3 0.3 0.3 0.3 0.3 0.27 -1.5 0.02 0.13 0.31 0.5 0.64 -0.02 -1.2 -0.66 0.3 0.3 0.3 0.3 0.3 0.3 -1.25 -0.52 0.3 -0.1 -0.5 -0.2 -0.12 -0.55 0.69 0.15 -0.17 0.3 0.3 0.3 0.3 0.3 0.3 0.3 0.3 0.3 0.3 0.3 0.3 0.3 0.3 0.3 0.3 0.3 0.3 0.3 0.3 0.3 0.3 0.3 0.45 0.82 0.72 0.04 -1.43 -0.41 0.51 0.32 0.37 -0.28 -0.02 -0.33 -1.32 0.3 0.3 0.3 0.3 0.23 0.55 0.3 0.49 0.3 0.11 0.3 At1g27480 264442_at
lecithin:cholesterol acyltransferase family protein / LACT family protein, similar to LCAT-like lysophospholipase (LLPL) (Homo sapiens) 2




Synthesis of membrane lipids in endomembrane system

1.79 4.96




















At3g15850 0.638 FAD5 fatty acid desaturase family protein. Chloroplastic enzyme responsible for the synthesis of 16:1 fatty acids from galactolipids and sulpholipids. Uses ferredoxin as electron donor. -0.13 0.37 0.03 1.36 -0.71 -0.98 -0.4 -0.52 -1.65 -0.88 -0.54 0.21 -2.33 -0.34 -1.11 -0.87 0.14 0.23 -0.62 -0.57 -1.03 -0.96 -0.03 -0.4 -0.85 -0.41 0.23 0.31 0.04 -0.92 -1.08 -0.23 -0.15 -0.01 -0.95 0.21 0.35 0.34 0.08 0.28 0.56 0.56 0.49 -0.26 -2.5 0.16 -0.5 -0.96 -0.49 -0.47 0.06 0.57 0.11 0.19 -0.22 -0.09 -1.24 -0.03 -1.15 -0.1 -0.89 0.38 0.09 0.23 0.22 0.03 0.33 0.56 0.59 0.94 0.26 0.12 0.45 0.55 0.48 0.24 0.35 -1.25 0.22 0.22 -0.05 -0.08 -0.09 -0.18 0.1 0.21 0.42 0.22 0.25 0.38 -0.05 -0.07 0.14 -0.02 -0.45 -0.08 0.3 0.43 0.7 0.32 0.33 0.15 0.21 -0.03 -0.88 -1.62 -2.88 -3.41 0.27 0.44 0.66 0.36 0.55 0.24 0.21 0.04 -0.37 -0.65 -1.36 -1.3 0.37 0.11 0.11 0.13 0.09 -0.05 0.16 0.43 -0.18 -0.03 -0.08 0.16 -0.07 -0.03 0.59 0.18 0.32 0.41 0.24 0.34 0.07 -0.77 -0.77 0.59 -0.68 0.27 0.63 0.75 0.83 0.53 -0.99 0.48 0.65 0.45 0.17 0.32 0.26 -0.05 0.34 0.28 0.43 -0.18 -0.16 0.55 0.49 -0.01 0.11 0.51 0.52 0.38 0.36 0.42 0.86 0.48 0.64 0.16 0.01 -0.36 -0.38 0.19 0.62 0.41 0.75 0.46 0.74 0.57 0.56 1.59 0.57 0.55 0.22 0.37 0.46 0.19 0.16 -0.25 0 0.2 -0.92 0 0.08 -0.31 -0.23 0.27 -0.45 0.85 0.39 1.04 0.17 0.28 0.54 0.5 -0.05 -1.13 1.51 At3g15850 258250_at FAD5 fatty acid desaturase family protein. Chloroplastic enzyme responsible for the synthesis of 16:1 fatty acids from galactolipids and sulpholipids. Uses ferredoxin as electron donor. 7 fatty acid desaturation | 16:0 monogalactosyldiacylglycerol desaturase activity | photoinhibition
glycosylglyceride desaturation pathway
Leaf Glycerolipid Biosynthesis | Leaf Glycerolipid Biosynthesis in Plastid Synthesis of membrane lipids in plastids

1.86 5.00




















At1g66970 0.628
glycerophosphoryl diester phosphodiesterase family protein, -0.89 -0.38 -0.06 -0.37 -0.1 -0.9 -0.52 -0.44 -0.8 -0.22 -0.88 -0.49 -2.91 -0.47 -0.75 -0.61 -0.4 -0.37 -0.01 -0.61 -0.49 -0.28 0.14 0.33 0.05 0.33 0.1 0.14 0.25 0.25 0.4 0.08 0.57 -0.08 -0.42 0.21 -0.04 0.1 0.21 0.35 0.31 0.39 0.36 0.15 -0.68 0.03 0.19 -0.5 -0.44 0.76 0.09 0.43 0.06 0.1 -0.07 -0.02 -0.49 0.07 -0.69 0.15 -0.56 0.19 -0.11 -0.14 0.17 -0.12 0 0.17 -0.24 0.5 0.38 0.64 0.47 0.28 0.56 0.27 0.6 0.31 0.12 0.18 0.4 0.1 -0.05 -0.07 0.21 0.49 0.45 -0.15 0.28 0.9 0.44 0.42 0.21 0.08 0.08 0.44 0.39 0.87 -0.01 0.46 0.57 0.96 0.22 0.34 0.31 -1.39 -1.66 -1.55 0.18 0.25 0.45 0.15 0.74 0.36 0.2 0.45 -0.25 -0.6 -0.87 -0.91 0.52 0.7 0.08 0.25 0.45 0.68 0.73 -0.12 0.45 0.19 -0.01 0.07 -0.14 0.31 0.05 0.14 0.99 0.14 -0.11 0.38 0.42 -0.52 0.01 -0.17 -1.27 0.2 -0.09 -0.08 -0.46 -1.41 -1.07 -0.2 0.48 0.04 0.51 0.43 0.23 -1.22 -2.24 1.33 0.17 0.48 0.11 -0.65 0.27 -0.77 -0.01 0.07 0.36 0.42 0.24 -0.34 0.34 -0.32 0.08 0.28 0.15 -1.8 0.15 0.68 0.68 0.15 0.15 -0.53 0.3 0.83 0.8 0.16 0.23 0.36 0.28 0.09 0.05 0.26 0.15 -0.18 -0.18 0.82 0.49 1.02 0.04 0.25 0.34 -1.04 -0.53 1.14 -0.45 0.15 0.44 -0.18 0.15 -0.53 -0.68 -2 -1.43 At1g66970 255852_at
glycerophosphoryl diester phosphodiesterase family protein, 2

glycerol metabolism




1.86 4.24




















At3g01660 0.619
expressed protein -1.33 0.17 0.24 0.24 -0.46 -1.12 -0.01 0.04 -1.35 -0.62 -0.14 -0.46 -1.52 0.13 -0.78 -1.12 0.01 -0.1 -0.32 -0.31 -0.45 -0.56 0.33 0.04 -0.47 -0.34 0.14 0.14 0.18 -0.21 -0.3 0.15 0.45 0.13 -0.51 0.42 0.42 0.44 0.31 0.51 0.2 0.41 0.14 0.02 -0.67 -0.06 -1.15 -0.86 -0.19 0.1 -0.04 0.68 0.34 0.28 0.05 0 -1 -0.25 -0.84 0.04 -0.46 0.78 0.08 -0.32 -0.07 -0.68 -0.03 0.44 -0.11 -0.01 0.24 -0.05 0.24 0.51 0.24 -0.14 0.71 -0.95 0.38 0.15 0.01 0.25 -0.18 -0.43 0.24 0.24 0.51 0.24 0.24 0.6 -0.23 0.27 0.08 0.51 -0.02 -0.09 0.24 -0.02 0.51 0.24 0.24 0.51 -0.16 0.13 -0.86 -0.09 -1.07 -1.23 0.24 0.24 0.51 0.24 0.25 0.61 0.37 0.15 -0.38 -0.59 -0.85 -1.07 -0.04 0.24 0.51 0.24 0.42 0.75 0.26 0.79 0.06 -0.48 -0.17 0.49 -0.05 -0.26 0.24 -0.11 0.24 0.51 0.24 0.24 0.6 -0.95 -0.56 0.2 0.28 0.79 -0.02 -0.06 -0.79 -1.54 -1.04 0.24 0 0.51 0.24 0.24 0.6 -1.58 -0.34 0.24 1.03 0.52 -1.52 -0.83 0.96 0.85 0.32 0.08 0.24 0.24 0.24 0.51 0.24 0.24 0.24 0.42 0.24 0.24 0.24 0.24 0.24 0.24 0.51 0.24 0.06 0.17 0.24 0.14 0.13 -0.08 0.6 0.96 1.14 0.23 -0.73 -0.76 -0.28 0.04 0.24 0.18 -0.06 -0.27 0.15 -1.56 -3.29 1.71 1.53 0.69 0.56 0.88 0.24 0.68 0.33 -1.88 0.24 At3g01660 259179_at
expressed protein 1

carbon monoxide dehydrogenase pathway




1.90 5.01




















At1g01080 0.614
33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative -0.53 0.05 0.25 -0.07 -0.1 -0.51 -0.35 -0.2 -1.83 -1.17 -0.46 -0.27 -2.48 -0.39 -0.84 -1.28 -0.12 -0.14 -0.82 -0.28 -0.83 -0.98 0.05 -0.34 -0.52 -0.16 0.1 0.03 -0.19 -0.19 -0.56 -0.12 0.05 0.08 -0.4 0.39 0.39 0.33 0.25 0.26 0.39 0.27 0.01 0.04 -0.98 0.15 -0.24 -0.35 -0.41 -0.37 -0.04 0.31 -0.23 0.13 -0.38 0.11 -1.05 0.16 -1.06 0.11 -0.75 0.22 -0.28 0.49 0.33 -0.07 -0.17 0.04 0.13 -0.08 0.38 0.07 0.23 0.41 0.32 0.26 0.63 -0.75 0.25 0.31 0.61 0.54 0.3 0.07 0.52 0.11 0.38 0.31 0.19 0.63 0.21 0.42 0.37 0.46 0.25 -0.02 0.02 0.41 0.44 0.64 0.5 0.62 0.05 0.3 -0.48 -1.19 -1.67 -1.98 0.54 0.44 0.28 0.63 0.44 0.48 0.12 0.21 -0.08 -0.65 -0.66 -1.09 0.3 0 -0.35 -0.42 0.42 0.49 0.1 0.66 0.28 0.23 0.16 0.01 0.08 -0.15 0.02 0.31 0.27 0.26 0.45 0.46 0.34 -0.31 -0.56 0.17 -0.59 0.54 0.35 0.07 -0.1 -0.55 -0.36 0.22 0.3 0.17 0.79 0.15 -0.1 -0.56 0.11 0 0.67 0.55 0.03 -0.79 -0.26 0.22 0.34 0.08 0.38 0.56 0.14 0.3 0.28 0.64 0.57 0.37 -0.38 -0.67 -0.63 -0.83 0.21 0.26 0.56 0.39 0.56 0.4 0.12 0.59 0.5 0.51 0.46 0.76 0.1 0.16 -0.15 -0.65 -0.11 -0.04 0.32 0.03 -0.01 -0.22 -0.1 -0.75 -2.94 1.87 0.76 1.4 0.49 0.08 0.06 0.3 0.23 -1.25 1.53 At1g01080 261577_at
33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative 4



mRNA processing in chloroplast


1.68 4.81




















At1g04640 0.612 LIP2 Lipoyltransferase, located in mitochondria but not found in chloroplasts -1.93 0.21 0.28 0.28 -0.88 -0.86 0.47 0.17 -1.18 -0.48 -0.33 0.3 -2.5 -0.25 -0.96 -1.18 -0.6 0.05 -0.03 -0.63 -0.62 -0.56 0.23 0.01 -0.28 0.03 0.3 0.17 -0.01 -0.15 -0.25 0.23 0.35 0.24 -0.2 0.5 0.46 0.45 0.17 0.19 0.22 0.39 0.35 -0.16 -1.38 0.01 -0.02 -0.7 -0.21 -0.14 -0.05 0.53 0.31 0.27 0.07 0.18 -0.69 0.25 -0.81 0.14 -0.36 0.36 0.08 -0.02 0.11 0.06 0.01 -0.09 0.28 -0.06 0.28 0.64 0.65 0.64 0.65 0.76 0.14 -1.24 0.1 0.24 0.14 -0.09 0.09 -0.11 0.42 0.56 0.04 0.71 0.6 0.25 0.16 0.14 0.26 0.01 0.26 0.17 0.38 0.24 0.39 0.3 0.49 -0.11 0.28 0.26 -0.59 -1.08 -1.25 -2.13 0.2 0.06 0.34 -0.05 -0.3 -0.59 0.26 0.28 0.04 -0.11 -0.23 -0.61 -0.13 -0.51 -0.54 -0.56 -0.22 -0.41 0.32 0.1 -0.2 0.07 -0.32 -0.08 0.09 0.04 -0.08 -0.12 0.09 0.3 0.08 0.2 0.13 -0.95 -0.08 0.33 -0.18 0.35 0.55 0.45 -0.21 -0.63 -0.79 0.35 0.62 0.69 0.27 0.02 -0.56 -0.76 -0.05 0.28 0.56 0.18 0.44 -0.12 -0.93 0.26 0.55 0.67 0.51 0.03 0.38 0.48 0.25 0.45 0.92 0.57 0.28 0.28 0.28 0.28 0.18 0.13 0.33 0.18 0.17 0.25 0.21 0.2 0.66 0.41 0.04 0.2 0.26 0.04 -0.92 -1.15 0 0.43 -0.22 0.51 0.08 -0.36 0.63 0.08 -0.99 0.28 0.28 -0.08 -0.04 1.13 0.59 -0.34 0.28 -0.95 0.13 At1g04640 264613_at LIP2 Lipoyltransferase, located in mitochondria but not found in chloroplasts 10 lipoic acid metabolism | lipoyltransferase activity



metabolism of acyl-lipids in mitochondria

1.60 3.64




















At1g60600 0.607
UbiA prenyltransferase family protein -0.19 0.04 0.37 1.05 0.02 -0.11 0.22 0.38 -1.66 -1.07 -0.36 -0.27 -1.85 -0.41 -0.56 -0.89 -0.22 0.11 -0.57 -0.26 -0.63 -0.95 0.07 -0.3 -0.48 0.06 0.35 -0.06 0.06 -0.53 -0.6 0.1 0.04 0.13 -0.46 0.43 0.48 0.42 0.25 0.39 0.6 0.46 0.28 -0.28 -0.76 0.31 0.26 -1.07 -0.57 -0.41 -0.19 0.38 -0.17 0.08 -0.5 0.09 -1.32 -0.02 -1.12 0.2 -1.04 0.32 -0.13 0.19 0.11 -0.22 -0.05 -0.1 0.12 -0.09 -0.08 0.44 0.32 0.27 -0.03 -0.19 0.43 -0.77 0.24 0.12 0.32 0.14 0.17 -0.26 0.09 0.38 0.02 -0.01 0.11 0.17 0.18 0.04 0.26 0.04 -0.1 -0.02 0.06 0.38 0.24 0.3 -0.01 0.35 0.2 0.13 -0.6 -1.35 -1.55 -1.86 0.8 0.43 0.08 0.36 0.57 0.32 0.28 0.24 0.02 -0.45 -0.52 -0.47 -0.03 0.21 -0.08 0.33 0.31 0.33 0.19 0.8 0.25 0.35 0.16 -0.02 0.1 0.12 -0.16 0.51 0.08 0.38 0.1 0.09 0.48 -0.63 -0.55 -0.05 -0.96 0.78 0.38 -0.13 -0.44 -0.81 -1.37 0.26 0.7 0.84 0.21 0.17 -0.04 -0.34 0.61 -0.09 0.83 0.64 0.11 -0.62 0.13 0.04 0.21 0.39 -0.11 0.43 0.48 0.21 0.7 0.52 0.27 0.68 0.24 0.24 0.24 0.14 0.17 0.24 -0.11 0.19 0.03 0.33 0.09 0.4 -0.26 -0.39 0.17 0.63 0.21 0.21 -0.26 -1.29 0.08 0.4 -0.11 -0.02 0.28 -0.33 0.07 -0.09 -1.13 0.95 0.97 0.84 0.46 0.17 0.7 0.57 0.14 -2.08 0.84 At1g60600 264963_at
UbiA prenyltransferase family protein 2

polyisoprenoid biosynthesis | biosynthesis of proto- and siroheme | mevalonate pathway Ubiquinone biosynthesis Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Phylloquinone biosynthesis
plastochinone and phylloquinone biosynthesis | phylloquinone biosynthesis
1.78 3.13




















At4g14890 0.605
ferredoxin family protein -0.76 0.22 0.17 1.12 -0.43 -0.84 -0.41 -0.39 -2.12 -0.82 -0.68 -0.11 -2.75 -0.31 -1 -1.22 -0.34 0 -0.46 -0.51 -0.74 -0.6 0.15 -0.08 -0.25 -0.09 0.08 0.01 -0.03 -0.26 -0.35 -0.18 0.18 0.13 -0.81 0.18 0.3 0.44 0.32 0.28 0.39 0.22 0.3 -0.23 -1.14 0.28 0.03 -0.95 -0.24 -0.06 -0.06 0.13 -0.06 0.14 -0.31 -0.01 -1.22 0.08 -1.13 -0.12 -1.07 0.16 -0.04 0.28 0.27 -0.34 -0.16 -0.08 0.2 -0.41 0.85 0.14 -0.33 0.13 0.21 0.46 0.94 -0.87 0.31 0.32 0.76 0.32 0.6 -0.07 0.49 0.24 0.01 0.35 0.41 0.99 0.49 0.36 0.51 0.37 -0.23 -0.33 0.23 0.26 0.32 0.08 0.13 0.28 0.48 0.16 -0.69 -0.83 -1.35 -2.25 -0.32 -0.27 -0.2 -0.2 0.01 0 0.19 0.34 -0.03 -0.4 -0.43 -1.13 -0.23 -0.14 -0.39 -0.8 0.06 0.87 0.19 0.28 0.17 0.08 0.21 0.11 0.24 -0.13 0.74 0.13 0.19 0.36 -0.02 0.28 0.74 -0.83 0.03 0.31 -0.59 0.85 0 0.4 -0.02 -0.48 -1.12 0.46 0.92 -0.14 0.12 -0.07 -0.13 -1.23 -0.06 0.19 0.65 0.8 0.68 0.46 0.67 0.5 0.35 0.18 0.78 0.13 0 0.33 0.66 0.52 0.36 1.12 0.28 0.28 0.28 0.28 0.28 0.28 0.28 0.49 0.2 0.64 0.08 0.56 0.45 0.56 0.72 0.53 0.77 0.53 -0.38 -1.33 -0.02 -0.31 0.33 -0.03 0.12 -0.28 -0.93 -0.92 -2.65 2.12 1.21 0.95 0.53 -0.2 0.42 0.39 0.35 -2.91 2.67 At4g14890 245347_at
ferredoxin family protein 2
transported compounds (substrates) | electron / hydrogen transport | transport facilitation
Photosynthesis Photosystems | Ferredoxin


1.99 5.58




















At1g14030 0.600
strong similarity to Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N- methyltransferase -1.3 NA 0.28 0.28 0 0.28 0.28 0.28 -1.62 -1.3 -0.39 -0.61 -2.45 -0.45 -1.57 -0.98 -0.03 -0.03 -0.53 -0.13 -1.57 -0.55 0.04 -0.21 -0.77 -0.14 0.27 0.11 0.01 -0.48 -0.56 0.04 0.22 -0.17 -0.63 0.36 0.53 0.67 0.41 0.11 0.37 0.53 -0.34 -0.37 -0.99 0.39 0.12 -0.91 -0.76 -0.63 -0.09 0.36 0.08 0.15 -0.3 0.3 -0.97 0.26 -0.86 0.18 -0.66 0.51 0.19 -0.06 -0.08 -0.3 -0.26 0.02 -0.03 -0.03 0.28 0.28 0.28 0.18 0.3 0.25 0.22 -0.69 0.74 0.42 0.65 0.48 0.24 0.21 0.35 0.22 0.26 0.24 0.04 0.17 0.65 0.36 0.54 0.45 -0.1 0.31 0.21 0.28 0.28 0.08 0.11 0.11 0.49 0.56 -0.57 -0.75 -1.13 -1.71 0.28 0.28 0.28 0.22 0.28 0.22 0.6 0.38 -0.18 -0.5 -0.42 -0.6 0.28 0.28 0.28 0.22 0.28 0.09 0 0.33 0.34 0.5 0.23 0.36 0.27 0.28 0.28 0.28 0.28 0.28 0.24 0.28 0.09 -0.62 -0.41 -0.21 -0.26 0.28 0.33 -0.06 -0.68 -1.13 -1.23 0.28 0.2 0.28 0.22 0.28 0.22 -2.06 1.05 0.28 0.36 0.51 0.21 0.01 -0.18 -0.08 0.2 0.07 0.28 0.39 0.28 0.28 0.28 0.32 0.28 0.22 0.28 0.28 0.28 0.28 0.28 0.28 0.28 0.28 0.28 0.46 0.28 0.51 0.13 0.22 0.22 0.22 0.24 0.56 -0.21 -1 0 0.3 0.15 0.41 0.13 -0.12 -1.3 0.11 0.28 0.28 0.28 0.28 0.67 -0.23 0.28 0.05 0.28 -2.04 0.28 At1g14030 262648_at
strong similarity to Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N- methyltransferase 6
C-compound and carbohydrate metabolism | glycolysis and gluconeogenesis | photosynthesis

Intermediary Carbon Metabolism


1.70 3.49




















At2g36990 0.596 SIGF RNA polymerase sigma subunit SigF (sigF) / sigma-like factor (SIG6) -0.9 0.05 0.26 -0.28 -0.14 -0.42 -0.37 -0.46 -1.78 -1.03 -0.44 -0.18 -2.65 -0.03 -1.19 -1.05 -0.54 -0.09 -0.6 -0.49 -1.04 -0.74 0.15 -0.27 -0.56 -0.07 0.28 0.51 -0.07 -0.5 -0.42 0.03 0.15 -0.1 -0.9 0.4 0.39 0.34 0.18 0.31 0.37 0.53 -0.02 -0.26 -1.15 0.28 -0.26 -0.97 -0.17 -0.15 -0.02 0.33 0.13 0.14 -0.08 0.16 -1.14 0.3 -1.06 -0.01 -0.73 0.44 -0.01 0.71 0.01 -0.28 -0.22 0.26 0.33 0.26 0.17 0.2 -0.39 0.11 0.04 0.2 0.72 -1.18 0.22 0.25 0.22 0.19 0.26 0.07 0.13 -0.16 0.3 0.24 0.16 0.43 0.26 0.39 0.33 0.28 0.23 0 0.17 -0.02 0.12 0.36 0.25 0.53 0.24 0.44 -0.57 -0.59 -0.83 -1.07 0.47 0.02 0.03 0.41 0.83 0.02 0.28 0.28 -0.07 -0.23 -0.02 -0.31 0.53 0.21 -0.23 -0.23 0.21 0.22 -0.16 0.75 -0.06 0.22 -0.14 0.22 0.21 -0.08 0.35 0.24 -0.14 0.36 0.24 0.28 0.15 -0.42 -1.06 0.22 -0.16 0.15 0.22 0.21 0.17 -0.03 -0.35 0.56 0.28 0.63 0.5 0.35 0.28 -0.74 -0.05 0.26 0.64 -0.06 -0.1 0.23 0.35 0.3 0.18 0.14 0.19 0.37 -0.13 0.01 0.25 0.51 0.43 0.21 -0.05 0.17 0.15 0.08 0.33 -0.02 0.53 0.2 0.23 0.76 -0.06 0.85 0.25 0.53 0.61 0.71 0.2 0.3 -0.19 -0.69 0.1 0.05 -0.28 -0.08 0.28 0.16 -0.9 -0.05 -2 0 -0.88 1.48 0.95 0 0.26 0.71 -0.21 -1.51 1.35 At2g36990 263846_at SIGF RNA polymerase sigma subunit SigF (sigF) / sigma-like factor (SIG6) 6 transcription initiation


Transcription (chloroplast)


1.72 4.12




















At3g55330 0.596
photosystem II reaction center PsbP family protein -1.46 0.12 -0.31 1.01 0.17 -0.1 -0.06 -0.14 -1.9 -1.15 -0.05 -0.14 -3.26 -0.05 -0.89 -1.8 0.05 -0.15 -0.82 -0.07 -0.73 -1.15 0.1 -0.18 -0.47 -0.19 0.18 0.09 0.02 -0.21 -0.5 -0.14 0.27 -0.03 -0.52 0.49 0.43 0.47 0.2 0.24 0.41 0.33 -0.06 -0.25 -1.35 0.37 -0.02 -0.69 -0.67 -0.68 0.15 0.3 -0.14 0.33 -0.33 0.34 -0.76 0.35 -0.75 0.34 -0.65 0.33 -0.15 0.22 0.08 -0.15 -0.18 -0.11 -0.05 -0.1 0.28 0.38 0.23 0.1 0.3 0.23 0.23 -0.41 0.31 0.35 0.5 0.42 0.37 0.24 0.23 0.23 0.23 0.23 0.23 0.23 0.27 0.21 0.28 0.12 -0.05 0.15 0.08 0.3 0.23 0.44 0.23 0.23 0.27 0.39 -0.21 -1.27 -2.06 -2.38 0.23 0.23 0.23 0.23 0.23 0.23 0.35 0.53 -0.2 -0.74 -0.76 -0.7 0.23 0.23 0.23 0.23 0.23 0.23 0.25 0.63 0.26 0.31 0.26 0.23 -0.03 0.18 0.23 0.23 0.52 0.23 0.23 0.23 0.23 0.06 -0.78 0.2 -0.39 0.6 0.4 0.4 0.11 -0.68 -0.23 0.23 0.23 0.04 0.23 0.23 0.23 -0.2 0.12 0.23 0.51 0.39 0.34 0.11 -0.17 0.13 0.1 0.25 0.23 0.75 0.23 0.23 0.23 0.23 0.35 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.43 0.23 0.23 0.42 0.05 0.23 0.09 -0.82 -0.37 0.06 -0.03 0.31 0.19 -0.53 -0.67 -1.3 -3.5 2.73 0.82 1.15 0.64 0.17 0.28 -0.28 0.04 -0.43 0.55 At3g55330 251784_at
photosystem II reaction center PsbP family protein 2
photosynthesis
Photosynthesis Photosystems | additional photosystem II components | psbP family of thylakoid proteins


1.67 6.23




















At4g12310 0.592 CYP706A5 cytochrome P450 family protein -1.2 NA -0.39 0.28 -0.38 -0.97 0.01 -0.26 -2.02 -0.6 0.17 -0.45 -2.74 -0.5 -1.48 -0.86 0 -0.16 -0.51 -0.17 -0.96 -0.9 0.01 -0.56 -0.97 -0.53 0.37 0.13 -0.35 -0.8 -1.01 -0.14 0.49 -0.26 -0.99 0.31 0.37 0.52 0.44 0.56 -0.07 0 0.56 0.07 -0.99 0.43 -0.62 -0.51 0.02 -0.09 0.06 0.31 0.31 0.01 0.08 -0.02 -0.56 0.01 -0.55 -0.03 -0.39 0.72 0.12 0.05 0.06 -0.02 0.4 0.09 0.02 0.32 -0.55 0.16 0.57 0.88 0.56 1.26 0.12 -2.08 0 0.42 0.23 -0.18 -0.11 0.01 0.25 0.51 0.8 -0.01 0.62 0.49 -0.49 0.34 0.5 0.15 0.14 0.16 -0.45 0.48 0.71 0.76 0.77 0.64 0.3 0.61 -0.74 -1.28 -3.02 -2.47 0.43 0.21 0.67 0.37 1.58 1.3 0.16 0.44 -0.35 -0.7 -1.02 -0.63 -0.49 0.76 0.86 0.74 1.07 1.08 0.71 0.97 0.75 -0.13 0.33 0.12 0.01 -0.25 -0.33 -0.31 0.6 0.44 0.67 0.95 -0.28 -1.53 -1.42 0.6 1.26 0.89 -0.19 0.4 -0.24 -0.59 -1.12 0.37 0.44 0.87 0.76 0.79 0.82 -2.78 -0.93 0.39 0.88 0.11 -1.26 -0.95 -0.03 0.05 0.33 0.42 0.41 0.23 0.49 1.01 0.96 0.09 1.56 0.82 0.42 0.36 0.87 0.28 0.28 0.28 0.36 0.28 0.18 0.26 0.6 0.85 0.39 0.94 0.28 0.45 1.13 -0.15 -0.8 -1.86 -0.3 0.09 0.01 0.4 -0.6 -0.17 -1.08 -2.41 -0.75 1.06 0.28 0.28 0.28 -0.16 0.18 1.3 0.05 -3.33 0.4 At4g12310 254835_s_at CYP706A5 cytochrome P450 family protein 1
biosynthesis of secondary products derived from primary amino acids | biosynthesis of glycosinolates and derivatives




cytochrome P450 family 2.42 4.91




















At3g48730 0.591
glutamate-1-semialdehyde 2,1-aminomutase 2 (GSA 2) -0.81 NA 0.46 1.41 -0.06 -0.31 -0.1 0.03 -1.9 -0.92 -0.36 -0.12 -2.7 -0.31 -0.73 -1.11 -0.11 0.06 -0.68 -0.31 -0.75 -0.76 0.05 -0.1 -0.62 -0.23 0.31 0.08 0.04 -0.3 -0.45 0.15 0.51 -0.02 -0.39 0.48 0.46 0.42 0.24 0.36 0.65 0.45 0.44 -0.09 -1.02 0.25 0.26 -0.53 -0.49 -0.13 0.18 0.45 -0.09 0.17 -0.27 0.28 -0.87 0.41 -0.74 0.15 -0.76 0.46 -0.16 0.54 0.38 -0.06 -0.22 -0.24 0.15 0 0.21 0.38 0.24 0.38 0.21 0.14 0.39 -0.48 0.61 0.37 0.66 0.32 0.3 0.14 0.46 0.38 0.19 0.02 0.15 0.07 0.48 0.51 0.57 0.12 0.1 0.02 0.25 0.31 0.31 0.16 -0.02 0.32 0.4 0.49 -0.14 -1.3 -1.73 -2.06 0.51 0.15 0 -0.27 -0.39 -0.34 0.3 0.31 0 -0.87 -0.69 -0.79 0.31 0.23 -0.21 -0.74 -0.6 -0.38 -0.37 0.64 0.46 0.37 0.34 -0.12 0.17 0.15 0.2 0.48 0.27 0.36 0.13 0.26 0.59 -0.13 -0.61 0.05 -0.19 0.27 0.18 -0.09 -0.37 -0.46 -0.21 0.22 0.27 0.21 0.05 -0.24 -0.03 -0.43 0.28 0.38 0.49 0.51 0.54 0.21 -0.35 -0.14 0.07 0.08 -0.02 0.43 -0.21 -0.49 -0.55 0.45 -0.18 0.11 0.24 0.23 -0.01 -0.23 0.17 0.35 0.38 0.56 0.12 0.56 0.46 0.61 -0.01 0.09 -0.06 0.47 0.21 0.17 -0.12 -1.03 0.15 0.21 0.01 0.08 0.27 0.22 -0.45 -0.41 -2.39 1.21 0.3 1.32 -0.01 -0.03 0.38 0.28 -0.09 -0.73 1.55 At3g48730 252318_at
glutamate-1-semialdehyde 2,1-aminomutase 2 (GSA 2) 6 porphyrin biosynthesis secondary metabolism | biogenesis of chloroplast chlorophyll biosynthesis | biosynthesis of proto- and siroheme | biotin biosynthesis I | arginine degradation II | arginine degradation III | arginine degradation V | glutamate degradation I Porphyrin and chlorophyll metabolism Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Chlorophyll biosynthesis and breakdown
chlorophyll and phytochromobilin metabolism | chlorophyll and phyochromobilin biosynthesis
1.44 4.25




















At3g08740 0.590
elongation factor P (EF-P) family protein -0.94 0.15 0.12 0.86 -0.09 -0.26 0.12 0.11 -1.37 -0.81 -0.56 0.04 -2.17 -0.48 -0.44 -0.82 -0.24 -0.03 -0.57 -0.26 -0.89 -0.65 -0.09 -0.17 -0.21 -0.12 0.31 0.04 0.12 -0.09 -0.47 -0.03 0.21 -0.04 -0.39 0.35 0.43 0.45 0.13 0.11 0.64 0.83 0.67 -0.16 -1.12 0.27 0.14 -0.86 -0.59 -0.18 0.09 0.28 -0.2 0.14 -0.55 0.18 -1.1 0.28 -0.92 0.16 -0.86 0.26 -0.15 0.71 0.23 0.04 -0.31 -0.1 0.25 0.08 0.24 0.12 0.2 0.24 0.36 0.32 0.28 -0.2 0.33 0.21 0.21 0.03 0.12 0.01 0.18 0.23 0.22 0.26 0.34 0.36 0.02 -0.02 0.1 -0.23 -0.17 -0.24 0.13 0.16 0.13 0.07 0.12 0.04 0.4 0.39 -0.14 -1.31 -1.49 -1.98 0.17 0.39 0.26 0.12 0.19 -0.28 0.27 0.19 -0.09 -0.46 -0.35 -0.67 0.22 0.09 -0.31 -0.51 -0.22 -0.36 -0.09 0.72 0.2 0.14 -0.01 -0.25 -0.04 -0.3 0.3 0.13 0.36 0.23 0.21 0.22 0.02 -0.01 -0.51 0.28 -0.39 0.32 0.16 0 -0.26 -0.28 -0.11 0.13 0.24 -0.07 -0.31 -0.1 -0.69 -0.28 -0.01 0.04 0.72 0.19 0.43 0.31 0.22 -0.2 -0.08 0.15 0.35 0.33 0.45 0.8 0.55 0.52 0.45 0.24 0.28 0.32 0.13 0.21 0.13 0.17 0.44 0.11 0.31 0.03 0.11 0.32 0.41 0.39 -0.09 0.83 0.28 0.22 0.09 -0.48 0.15 0.16 -0.28 -0.1 0.25 0.06 0.68 0.25 -1.82 0.31 -0.42 1.29 0.49 -0.02 0.89 -0.03 0.03 -0.67 0.95 At3g08740 258674_at
elongation factor P (EF-P) family protein 2


Translation factors



1.54 3.46




















At4g31850 0.588 PGR3 encodes a protein containing 27 pentatrico-peptide repeat (PPR) motifs -0.84 0.24 0.25 -0.4 -0.22 -0.68 -0.41 -0.42 -1.5 -0.82 -0.57 -0.09 -1.79 -0.61 -0.96 -1.3 -0.44 0.06 -0.55 -0.37 -0.83 -0.78 -0.04 -0.24 -0.62 -0.07 0.14 0.05 -0.01 -0.51 -0.41 0.16 0.07 -0.09 -0.34 0.28 0.22 0.14 0.05 0.33 0.24 -0.01 -0.34 -0.32 -1.02 -0.13 -0.66 -0.89 -0.57 -0.45 -0.04 0.48 0.08 0.23 -0.14 -0.04 -1.22 -0.01 -1.09 0.12 -0.92 0.49 -0.12 0.01 0.2 -0.24 -0.09 0.25 -0.04 0.1 0.2 0.43 0.47 0.36 0.19 0.15 0.56 -1.34 0.3 0.34 0.2 0.16 -0.1 -0.57 0.52 0.21 0.37 0.22 0.35 0.54 0.41 0.01 0.45 0.32 -0.34 -0.18 0.22 -0.14 0.56 0.47 0.3 0.19 0.26 0.21 -0.77 -0.79 -1.92 -1.41 0.78 0.65 0.4 0.56 0.47 0.66 0.33 0.2 -0.15 -0.59 -0.93 -0.98 0.47 0.42 -0.19 0.04 0.61 0.02 0.02 0.53 -0.01 -0.07 -0.1 0.17 -0.14 0.02 -0.15 0.02 0.11 0.13 0.35 0.66 0.43 -0.63 -1.19 0.34 0.06 0.53 0.25 0.16 -0.12 -0.3 -0.1 0.56 0.59 0.65 0.6 0.63 0.56 -0.89 -0.22 0.05 0.53 0.49 -0.25 -0.76 0.55 0.67 0.31 0.14 0.17 0.64 -0.22 0.52 -0.07 0.69 0.57 0.65 -0.23 0.48 0.84 0.6 0.44 0.3 0.09 0.26 0.2 0.56 0.35 0.52 0.38 0.6 0.55 0.6 0.44 0.39 -0.09 -0.87 -0.37 -0.1 0.16 0.09 0.19 0.43 -1 -0.35 -2.29 0.65 0.75 2 0.19 0.04 0.42 0.28 0.83 -1.11 0.54 At4g31850 253495_at (m) PGR3 encodes a protein containing 27 pentatrico-peptide repeat (PPR) motifs 10



mRNA processing in chloroplast


1.69 4.31




















At3g50270 0.587
transferase family protein, similar to anthranilate N-hydroxycinnamoyl/benzoyltransferase, Dianthus caryophyllus -0.92 NA 0.28 0.28 -0.43 -0.82 0 -0.53 -0.83 -0.48 -0.64 0.49 -1.25 -0.56 -0.98 -0.79 -0.64 0.2 -0.22 -0.55 -1.13 -0.73 0.44 0.09 -0.18 0.2 0.26 0.41 0.07 0.23 0.12 0.42 0.17 -0.27 -0.91 0.28 0.28 0.27 0.28 0.33 0.2 0.06 -0.2 0.17 -0.61 0.18 0.05 -0.41 0.02 0.1 -0.3 0.37 0.21 0.17 -0.05 -0.36 -1.03 -0.03 -0.81 -0.19 -0.48 0.42 0.02 -0.03 0.28 0.18 -0.03 -0.06 0.28 0.04 0.28 0.28 0.28 0.28 0.28 0.28 0.28 -0.14 0.26 0.14 0.33 0.23 0.35 0.1 0.28 0.28 0.28 0.28 0.28 0.28 0.41 0.12 0.41 0.22 0.27 0.17 0.28 0.28 0.28 0.28 0.28 0.28 0.6 0.47 -0.88 -1.38 -3.07 -3.89 0.28 0.28 0.28 0.28 0.28 0.28 0.59 0.54 -0.59 -0.24 -0.37 -0.42 0.28 0.28 0.28 0.28 0.28 0.28 0.32 0.67 0.56 0.92 0.6 0.05 0.48 0.37 0.28 0.28 0.28 0.28 0.28 0.28 0.28 -0.96 -0.64 0.1 -1.67 0.92 0.85 0.04 -0.02 -0.21 -1.66 0.28 0.28 0.28 0.28 0.28 0.28 -0.62 0.61 0.28 0.83 0.49 0.1 -1.09 0.62 0.14 0.28 0.52 0.28 0.28 0.28 0.28 0.28 0.28 0.28 0.28 0.28 0.28 0.28 0.28 0.28 0.28 0.28 0.28 0.28 0.28 0.28 0.28 0.28 0.28 0.28 0.59 0.75 0.04 -0.82 -0.82 0.08 0.09 -0.74 0.45 -0.63 -0.22 -0.48 -3.03 0.28 -1.1 -0.85 0.28 0.64 0.86 0.28 0.9 0.2 -3.23 0.28 At3g50270 252199_at
transferase family protein, similar to anthranilate N-hydroxycinnamoyl/benzoyltransferase, Dianthus caryophyllus 1
biosynthesis of derivatives of dehydroquinic acid, shikimic acid and chorismic acid




acyltransferase, BAHD family 1.66 4.81




















At4g28660 0.577
photosystem II reaction centre W (PsbW) family protein -2 0.08 0.25 1.38 -0.11 -0.36 0 -0.12 -2 -1.1 -0.27 0.08 -2.66 -0.23 -0.93 -1.47 -0.19 -0.11 -1.2 -0.25 -0.82 -1.14 -0.08 -0.03 -0.47 -0.42 0.12 -0.02 0.1 -0.28 -0.84 -0.16 0.35 -0.05 -0.39 0.11 0.19 0.27 0.07 0.01 0.34 0.5 0.42 -0.04 -1.54 0.09 0.14 -0.42 -0.19 -0.25 0.13 0.38 -0.06 0.38 -0.22 0.49 -1.04 0.35 -0.96 0.26 -0.71 0.52 -0.06 0.23 0.31 -0.08 -0.41 -0.31 0.07 0.14 0.01 0.27 -0.05 0.07 -0.06 0.28 0.17 -0.63 0.65 0.19 0.15 -0.28 0.01 -0.1 0.28 -0.03 0.31 -0.2 0.03 0.18 0.15 -0.16 0.18 -0.12 -0.16 0.27 -0.07 -0.32 0.49 0.14 0.55 0.36 0.6 0.17 -0.32 -1.4 -1.8 -1.93 0.53 0.12 0.28 0.05 0.23 0.21 0.47 0.22 0.03 -0.66 -0.41 -0.3 0.16 -0.13 0 -0.2 0.46 0.11 0.11 0.76 0.5 0.04 -0.2 -0.4 -0.17 0.28 -0.02 -0.14 -0.28 0.16 -0.14 0.43 0.06 -0.1 -1.79 0.31 0.33 1.06 0.28 0.68 0.22 -0.19 -0.08 0.71 0.23 0.57 0.22 -0.42 0.05 -0.25 0.57 -0.17 0.96 0.67 0 -0.64 -0.89 -0.26 0.48 0.97 0.47 0.52 -0.08 0.13 0.53 0.39 1.19 0.69 0.05 0.51 0.24 -0.14 -0.06 0.35 -0.06 0.19 -0.02 1.2 1.38 1.23 0.37 0.67 0.49 0.45 0.74 0.43 0.62 -0.65 -0.13 0.23 -0.48 -0.22 -0.11 -0.2 -0.28 -0.72 -2.61 1.48 1.26 1.12 0.32 0.37 0.21 -0.32 0.09 -0.18 0.97 At4g28660 253790_at
photosystem II reaction centre W (PsbW) family protein 2
photosynthesis
Photosynthesis



2.12 4.15




















At5g42240 0.575
serine carboxypeptidase S10 family protein 0.85 0.28 0.15 -0.27 -0.12 -0.78 -0.49 -0.38 -1.64 -0.54 -0.35 -0.03 -1.78 -0.27 -1.09 -0.81 -0.43 -0.12 -0.23 -0.56 -0.52 -0.35 0.27 -0.18 -0.38 -0.04 0.38 0.26 0.04 -0.28 -0.27 0.43 0.22 0.12 -0.5 0.35 0.3 0.4 0.1 0.64 0.52 0.41 0.27 -0.21 -1.22 0.15 0.19 -1.01 -0.4 0.1 0.24 0.37 0.13 0.02 0.05 -0.11 -0.57 0.21 -0.53 0.08 -0.47 0.34 0.3 0.36 0.41 -0.13 -0.2 0.2 0.23 0.24 0.35 0.13 0.35 0.36 0.09 -0.2 0.55 -0.57 0.63 0.44 0.13 0.21 0.19 -0.12 0.27 0.59 0.35 0.2 0.45 0.26 0.4 0.44 0.28 0.21 0.05 0.18 0.21 0.53 0.42 -0.21 -0.08 -0.56 0.05 0.25 -0.89 -1.11 -1.58 -1.78 0.21 0.41 -0.18 -0.57 -0.28 -0.68 0.22 0.17 -0.44 -0.64 -0.54 -0.84 0.2 0.23 -0.37 -0.92 -0.97 -0.98 0.37 0.35 0.17 0.22 -0.11 0.25 0.17 0.21 0.28 0.28 0.44 0.42 -0.01 0.34 0.47 -0.17 -0.56 0.49 0.11 0.12 -0.04 0.02 0.32 0.19 -0.22 0.16 0.45 0.52 0.02 0.24 0.22 -0.53 -0.45 0.43 0.35 0.36 -0.01 -1.23 -0.36 0.33 0.56 0.43 0.21 0.31 0.41 0.45 -0.62 0.05 0.68 0.56 -0.16 -0.12 -0.49 0.17 0.3 0.72 0.87 0.86 0.09 -0.02 0.66 0.62 0.01 0.26 -0.06 0.16 0.14 0.31 -0.31 -0.8 0.26 0.42 -0.1 0.15 0.1 0.32 -1.63 0.3 -2.35 1.56 0.02 1.13 0.28 0.42 0.34 0.56 0.26 -1.95 1.25 At5g42240 249216_at
serine carboxypeptidase S10 family protein 2






serine carboxy peptidase like, clade II 1.65 3.91




















At5g52440 0.575 HCF106 Thylakoid membrane delta pH translocation pathway component protein; related to Escherichia coli TatA and TatB -0.59 0.38 0.3 0.3 -0.82 -1.19 -1.19 -1.19 -1.37 -0.98 -0.34 0.14 -1.31 -0.39 -0.83 -0.98 -0.4 0.11 -0.55 -0.37 -1.03 -0.71 0.07 -0.05 -0.49 -0.04 0.18 0.21 0.03 -0.33 -0.15 0.02 0.19 0.24 -0.34 0.46 0.41 0.64 0.22 0.24 0.22 0.49 0.26 -0.33 -1.12 0.15 0.07 -0.64 -0.15 -0.31 0.16 0.42 0.08 0.39 -0.13 0.49 -0.83 0.38 -1 0.16 -0.67 0.34 -0.07 0.25 -0.04 -0.04 0.25 0.04 0.31 -0.23 0.34 0.35 -0.08 0.02 0.54 0.65 0.31 -0.65 0.15 0.2 0.19 0 0.1 -0.44 0.09 0.07 0.28 0.44 0.3 0.23 0.16 0.03 0.38 0.05 -0.11 -0.02 0.45 0.37 0.15 0.46 0.26 0.13 0.24 0.11 -0.56 -0.56 -1.08 -1.17 -0.35 -0.11 0.39 0.34 0.81 0.56 0.13 0.34 0.06 -0.18 -0.5 -0.63 0.47 -0.16 -0.14 -0.21 0.19 0.13 0.17 0.65 -0.19 -0.05 -0.03 0.01 0.22 0.04 0.65 -0.28 -0.17 0.17 0.5 0.48 0.16 -0.31 0.21 -0.09 -0.6 0.27 0.52 -0.1 -0.32 -0.39 -1.04 0.49 0.49 0.4 0.51 0.17 -0.44 -0.74 -0.36 0.02 0.76 0.46 0.34 0.31 0.75 0.25 0.4 0.11 0.53 -0.02 -0.04 -0.17 0.6 0.39 0.64 0.31 0.03 -0.37 0.1 -0.35 -0.27 0.28 0.51 0.53 0.11 0.16 0.12 0.34 0.46 0.39 0.16 0.49 -0.06 0.11 -0.4 -1.01 -0.05 0.04 0.14 0.47 0.04 -0.01 -0.07 -0.46 -2.91 0.74 0.15 1.67 0.37 0.18 0.3 -0.08 0.3 -0.9 1.2 At5g52440 248338_at HCF106 Thylakoid membrane delta pH translocation pathway component protein; related to Escherichia coli TatA and TatB 10 chloroplast thylakoid membrane protein import | delta-pH-dependent transporter activity


Pathway for nuclear-encoded, thylakoid-localized proteins | Delta-pH pathway


1.63 4.58




















At1g23360 0.574
UbiE/COQ5 methyltransferase family protein, similar to 2-hexaprenyl-1,4-naphthoquinone methyltransferase from Micrococcus luteus -0.1 0.04 -0.16 0.68 -0.12 -0.2 -0.18 -0.21 -0.79 -0.37 -0.18 -0.01 -0.82 -0.05 -0.42 -0.65 0.03 0.04 -0.4 -0.13 -0.27 -0.27 -0.16 -0.13 -0.03 -0.01 0.22 -0.38 0 0.1 -0.24 -0.22 -0.17 0.18 0.01 0.07 0.19 0.18 0.25 0.1 0.28 0.31 0.17 -0.28 -0.54 0.16 0.28 -0.39 -0.19 0.01 0.02 0.35 -0.1 0.09 -0.22 -0.04 -0.76 0.05 -0.72 0.02 -0.73 -0.05 -0.11 0.4 0.26 -0.41 -0.06 -0.1 0 0.1 0.65 0.21 0.02 0.02 0.25 0.35 0.28 -0.5 0.22 -0.06 0.48 -0.01 0.25 0 0.13 -0.02 -0.35 0.19 0.02 0.08 0.37 0.2 0.23 0.1 -0.01 -0.02 0.34 0.14 -0.14 0.54 0.26 0.4 0.17 0.11 -0.4 -0.9 -1.13 -1.5 0.01 -0.31 -0.08 0.06 0.26 0.02 0.35 -0.02 -0.16 -0.47 -0.36 -0.74 -0.11 -0.17 0.05 0.2 -0.08 -0.34 0.01 0.61 0.13 -0.28 0.08 -0.18 0.12 -0.36 0.47 0.03 0.06 0 0.42 0.14 0.07 -0.4 -0.25 -0.18 -0.68 0.71 -0.48 -0.24 -0.74 -1.07 -0.97 -0.01 -0.18 -0.33 -0.09 0.04 -0.26 0.06 0.53 0.05 0.88 0.49 -0.07 -0.32 -0.16 -0.09 0.28 0.35 0.75 0.36 -0.12 -0.06 0.68 0.66 0.72 0.48 -0.12 0.04 0.45 0.68 0.79 0.02 -0.01 -0.26 0.33 0.34 0.41 -0.01 0.3 0.38 -0.22 0.79 0.43 -0.14 -0.34 -0.62 0.09 -0.12 -0.18 0.13 0.2 -0.05 0.22 -0.01 -0.57 0.86 0.36 0.28 0.85 0.75 0.37 0.03 0.02 -1.15 0.8 At1g23360 263044_at
UbiE/COQ5 methyltransferase family protein, similar to 2-hexaprenyl-1,4-naphthoquinone methyltransferase from Micrococcus luteus 2

carbon monoxide dehydrogenase pathway Ubiquinone biosynthesis

plastochinone and phylloquinone biosynthesis | phylloquinone biosynthesis
1.41 2.37




















At1g08540 0.566 SIGB Subunit of chloroplast RNA polymerase, confers the ability to recognise promoter sequences on the core enzyme 0.01 0.16 0.19 0.19 -0.45 -1.13 -0.91 -0.7 -1.37 -1.17 -0.6 -0.13 -1.51 -0.48 -1.12 -1.17 -0.5 -0.12 -0.57 -0.74 -1 -0.81 0.18 -0.39 -0.52 0.01 0.09 0.26 0.07 -0.46 -0.49 -0.19 0.18 -0.04 -1.02 0.32 0.24 0.34 0.15 0.28 0.2 0.25 -0.22 -0.1 -1.2 0.03 -0.69 -0.85 -0.39 -0.18 0.25 0.42 -0.03 -0.12 -0.2 -0.08 -0.76 0.06 -0.69 0.16 -0.56 0.45 0.03 -0.11 -0.24 -0.3 -0.28 -0.23 0.07 -0.19 0.3 0.05 -0.04 0.25 0.08 0.64 0.17 -0.85 0.08 0.06 0.34 0.09 0.27 0 0.23 0.13 0.05 0.22 0.77 0.28 0.17 0.18 0.34 0.17 0.22 -0.18 0.03 0.07 0.6 0.56 0.68 0.31 0.21 0.16 -0.25 -0.48 -0.88 -0.6 0.21 0.2 0.42 0.31 0.9 0.81 0.13 0.14 0.08 -0.22 -0.38 -0.56 0.28 0.32 0.67 0.07 0.7 0.4 -0.22 0.3 0.17 0.23 0.09 -0.07 -0.03 -0.02 0.53 0.09 0.2 0.51 -0.11 0.56 0.32 -0.82 -0.62 0.08 -0.54 0.54 0.54 0.2 0.02 -0.31 -0.45 0.28 0.27 0.54 0.28 0.36 0.07 0.25 0.98 0.19 0.42 0.28 0.19 -0.16 0.24 0.36 0.49 0.43 0.7 -0.01 0.22 0.69 0.89 0.39 0.85 0.47 0.36 0.14 -0.17 -0.26 -0.19 0.34 0.4 0.04 0.5 0.19 -0.02 0.76 0.2 0.63 0.62 0.26 0.27 -0.25 -0.18 -1.08 -0.15 -0.01 -0.17 0.01 0.37 -0.2 -1.37 -0.36 -2.12 2.04 0.19 0.19 0.4 -0.05 0.19 0 0.41 -1.58 0.28 At1g08540 264781_at SIGB Subunit of chloroplast RNA polymerase, confers the ability to recognise promoter sequences on the core enzyme 10 transcription initiation


Transcription (chloroplast)


1.72 4.17




















At2g35410 0.566
similar to 33 kDa ribonucleoprotein, chloroplast precursor (Nicotiana sylvestris) -1.74 0.02 -0.26 0.62 -0.02 -0.2 0.06 0.03 -1.12 -0.6 -0.22 -0.08 -1.72 -0.1 -0.64 -0.88 -0.02 -0.06 -0.53 -0.12 -0.52 -0.81 0.01 -0.24 -0.38 -0.17 0.04 -0.1 -0.12 -0.25 -0.41 -0.2 0.19 0.06 -0.5 0.06 0.22 0.28 0.11 0.17 0.3 0.25 0.06 -0.07 -0.62 0.13 -0.02 -0.3 -0.27 -0.3 -0.17 0.16 -0.23 -0.07 -0.49 -0.09 -0.99 -0.04 -0.94 -0.01 -0.84 0.24 -0.31 -0.05 0.18 -0.08 -0.03 0.01 -0.06 -0.02 0.31 -0.05 0.12 0.28 0.61 0.23 0.46 -0.53 0.19 0.31 0.32 -0.05 0.02 -0.17 0.1 0.11 0.23 0.4 -0.05 0.23 0.18 0.32 0.23 0.03 -0.14 -0.2 0.06 0.16 0.61 0.35 0.31 0.49 0.33 0.26 -0.13 -0.94 -1.28 -1.39 -0.11 -0.12 0.37 0.48 0.64 0.55 0.43 0.28 -0.18 -0.83 -0.56 -0.8 -0.14 -0.28 -0.26 0.31 0.37 0.18 0.05 0.21 0.24 0.28 0.2 -0.15 -0.17 -0.26 -0.03 -0.27 -0.18 0.4 0.6 0.4 0.07 -0.14 -0.2 0.51 -0.42 0.69 0.1 0.22 -0.23 -0.61 -0.54 0.02 -0.13 0.11 -0.26 -0.45 -0.39 -0.3 0.27 0.06 0.64 0.46 0.36 -0.04 0.12 -0.26 0.2 0.23 0.17 0.19 0.8 1.56 0.8 0.48 0.56 0.27 -0.05 0.08 0.59 0.61 0.88 0.59 0.36 -0.08 0.05 0.26 0.26 1.03 0.5 0.36 0.53 0.12 0.31 0.24 0.35 -0.42 -0.05 -0.28 0.09 -0.35 0.14 -0.04 -0.02 -0.86 -1.57 1.15 0.26 1.04 0.53 0.02 0.23 -0.34 -0.01 -1.28 0.66 At2g35410 266642_at
similar to 33 kDa ribonucleoprotein, chloroplast precursor (Nicotiana sylvestris) 4



mRNA processing in chloroplast


1.49 3.30




















At3g13120 0.566
30S ribosomal protein S10, chloroplast, putative -0.39 0.21 0.35 0.28 0.05 -0.22 0 -0.06 -1.66 -0.95 -0.34 -0.02 -2.29 -0.18 -0.56 -1.12 -0.02 0.13 -0.76 -0.23 -0.56 -0.89 0.08 0.08 -0.56 -0.25 0.28 0.09 0.13 -0.34 -0.36 0.07 0.35 0.13 -0.13 0.49 0.55 0.54 0.37 0.3 0.56 0.45 0.13 -0.19 -1.3 0.4 0.19 -0.63 -0.27 -0.35 0.1 0.46 -0.02 0.39 -0.24 0.32 -0.74 0.23 -0.76 0.3 -0.74 0.46 -0.02 0.28 0.37 0.11 -0.07 0.01 0.01 0.13 0.04 0.24 0.04 0.26 0.46 0.16 0.26 -0.26 0.32 0.24 0.16 0.02 -0.08 -0.18 0.24 0.06 0.26 0.18 0.38 0.18 0.15 0.07 0.15 0.02 -0.27 0.16 0.3 0.03 0.38 0 0.31 0.09 0.15 0.16 -0.28 -0.99 -1.73 -1.97 0.11 -0.16 -0.02 0.09 0.34 0.03 0.28 0.41 0.08 -0.45 -0.65 -0.75 0.34 -0.2 -0.14 -0.35 -0.12 -0.2 0.02 0.54 0.15 0.04 -0.15 -0.04 -0.04 0.25 0.32 -0.04 -0.22 0.26 0.27 0.17 0.3 0.08 -0.28 0.02 -0.48 0.34 0.3 0.11 -0.11 -0.21 0.05 0.14 0.33 0.45 0.17 0.22 -0.48 -0.05 0.3 0.36 0.61 0.43 0.35 0.03 -0.12 -0.19 -0.07 0.37 0.01 0.22 0.02 0 0.22 0.27 0.14 0.07 0.07 0.09 -0.06 -0.6 -0.41 -0.04 0.44 0.23 0.26 0.23 -0.11 0.65 0.26 0.42 0.26 0.43 -0.15 0.01 -0.19 -0.76 -0.17 0.41 0.01 -0.03 0.31 -0.13 -0.12 -0.68 -1.6 1.33 0.37 1.42 0.18 0.1 0.53 0.02 0.39 -0.5 1.13 At3g13120 257190_at
30S ribosomal protein S10, chloroplast, putative 4


Ribosome



1.23 3.71




















At5g13730 0.566 SIGD RNA polymerase sigma subunit SigD (sigD) / sigma-like factor (SIG4) -3.03 0.33 0.35 0.35 -0.43 -0.75 -0.28 -0.36 -2.06 -1.46 -0.01 -0.27 -2.2 0.26 -1.03 -1.43 0.04 -0.14 -0.63 -0.38 -1.02 -1.06 0.16 -0.23 -0.52 -0.17 0.33 0.05 -0.12 -0.32 -0.56 0.04 0.42 0.49 -0.75 0.48 0.55 0.5 0.37 0.44 0.51 0.28 -0.25 0.17 -1.19 0.12 -1.45 -0.94 -0.34 -0.33 -0.4 0.46 0.36 0.2 0.09 -0.09 -0.79 0.05 -0.78 -0.31 -0.44 0.54 0.23 -0.38 -0.28 -0.67 0 0.4 0.06 0.44 0.32 0.35 0.35 0.35 0.38 0.35 0.35 -0.96 0.08 0.36 0.26 0.34 -0.12 -0.23 0.35 0.35 0.35 0 0.35 0.35 0.57 0.72 0.28 0.65 0.21 0.21 0.3 0.35 0.35 0.35 0.35 0.35 0.56 0.75 -0.25 0.33 -1.26 -0.72 0.35 0.35 0.35 0.22 0.35 0.66 0.72 0.68 0.45 0.23 -0.22 0.2 0.35 0.35 0.35 0.44 0.49 0.39 0.38 0.1 -0.02 0.38 0.17 0.49 -0.13 0.19 0.35 0.35 0.35 0.35 0.35 0.35 0.35 -1.55 -0.32 -0.07 -0.35 0.53 0.97 -0.09 -1.02 -2.58 -2.14 0.35 0.35 0.35 0.35 0.35 0.35 -0.84 0.07 0.35 0.28 0.14 0.05 -0.37 0.89 0.97 0.31 0.32 0.35 0.35 0.35 0.35 0.35 0.35 0.35 0.35 0.35 0.35 0.35 0.35 0.35 0.35 0.35 0.35 0.35 0.37 0.35 0.22 0.35 0.35 0.35 0.22 0.46 0.04 -1.33 -1.32 -0.38 0.2 0.57 0.53 0.26 0.13 -1.05 -2.49 -3.06 0.09 -1.01 2.87 0.77 0.93 0.35 -0.09 0.35 -2.66 0.35 At5g13730 250255_at SIGD RNA polymerase sigma subunit SigD (sigD) / sigma-like factor (SIG4) 8 transcription initiation


Transcription (chloroplast)


2.09 5.92




















At4g04040 0.559
strong similarity to Pyrophosphate--fructose 6-phosphate 1-phosphotransferase beta subunit 0.14 NA 0.16 -0.2 -0.23 -0.46 0.09 0.28 -1.41 -0.32 -0.54 -0.24 -1.21 -0.21 -1 -0.46 -0.24 0.3 -0.26 -0.56 -0.36 -0.28 -0.05 -0.18 0.08 0.31 0.45 -0.04 -0.16 0.01 0.12 0.27 0.28 0.03 -0.5 0.32 0.2 0.27 0.08 0.23 0.34 0.42 0.21 0.09 -0.62 -0.2 -0.06 -0.51 0.12 0.27 0.07 0.43 0.57 0.14 0.15 0.16 -0.16 0.26 -0.26 0.28 -0.31 0.54 0.35 0.08 -0.08 -0.24 -0.11 0.24 0.2 0.34 0.49 0.47 0.24 0.75 0.5 0.13 0.62 -0.69 0.12 0.07 -0.06 0.15 -0.05 -0.38 0.27 0.25 0.7 0.26 0.16 0.63 0.03 0.16 0.03 0.22 -0.01 -0.04 0.23 0.47 0.66 -0.3 0.11 0.45 0.22 0.18 -0.44 -0.3 -0.47 -0.6 -0.21 -0.19 -0.21 -0.37 0.22 0.11 0.04 0.33 -0.34 -0.28 -0.64 -0.85 -0.13 -0.15 -0.04 -0.42 0.05 0.03 0.19 0.38 -0.17 0.11 -0.18 0.37 0.15 -0.1 0.31 -0.3 -0.33 0.25 0.12 -0.02 0.17 -0.27 0.57 -0.14 -2.4 0.11 0.42 -0.04 -0.01 -0.4 -0.77 0.24 0.17 0.54 -0.21 0.05 -0.49 -0.8 0.44 0.02 0.39 0.05 0.22 -0.24 -0.09 0.2 0.22 -0.03 0.35 0.24 0.33 -0.25 0.07 0.46 0.62 0.38 -0.03 -0.2 -0.31 -0.81 -0.63 -0.57 0.28 0.14 0.52 0.19 0.13 0.48 0.4 0.6 0.59 0.36 0.2 0.13 -0.28 -0.21 0.3 0.27 -0.39 0.57 0 0.13 -0.75 0.2 -0.87 0.62 0.15 0.14 0.19 0.5 -0.21 0.19 0.42 -2.59 -0.4 At4g04040 255365_at
strong similarity to Pyrophosphate--fructose 6-phosphate 1-phosphotransferase beta subunit 6
C-compound and carbohydrate utilization | glycolysis and gluconeogenesis mannitol degradation | sorbitol fermentation | sorbitol degradation | fructose degradation (anaerobic) | acetate fermentation | glycolysis I | glycolysis IV Fructose and mannose metabolism Intermediary Carbon Metabolism


1.29 3.33




















At5g52520 0.558
tRNA synthetase class II (G, H, P and S) family protein -0.04 0.05 -0.01 0.93 0.02 -0.26 -0.11 -0.19 -0.63 -0.19 -0.3 -0.41 -1.6 -0.45 -0.93 -1.22 -0.23 -0.46 -0.64 0 -1.04 -0.61 0.07 -0.26 0.02 0.05 0.05 0.03 -0.08 0.11 -0.19 0.21 -0.02 0.09 0.11 0.56 0.23 0.21 0.23 0.42 0.27 0.44 0.36 -0.24 -0.74 0.05 -0.22 -0.59 -0.35 -0.16 0.12 0.39 0.14 0.21 -0.28 0.09 -0.83 0.13 -0.59 0.19 -0.51 0.55 0.15 0.36 0.41 0.02 -0.06 0.32 0.34 0.32 -0.06 0.24 0.4 0.2 0.02 -0.31 0.27 -0.46 0.38 0.22 0.28 0.11 -0.03 -0.22 0.4 0.36 0.22 -0.08 0.13 -0.01 0.19 0.03 0.39 0.09 -0.17 -0.07 0.49 0.07 0.2 0.17 0.14 0.21 0.09 0.16 0.05 -0.63 -0.85 -1.35 0.46 0.12 0.05 -0.06 -0.1 -0.18 0.14 0.03 0.07 -0.63 -0.56 -0.89 0.44 0.09 -0.01 0.12 -0.24 -0.37 0.02 0.27 0.06 0.05 0.09 -0.06 -0.02 0.02 -0.26 0.12 0.12 -0.06 0.18 0.07 0.2 -0.07 -0.56 -0.19 -0.19 0.03 0.36 0.21 0.03 -0.1 -0.3 0.52 0.21 0.11 0.2 -0.06 -0.3 -0.48 0.26 0.07 0.48 0.17 0.04 -0.03 0.06 0.11 0.23 0 -0.33 0.47 0.02 -0.43 -0.1 0.28 0.25 0.28 -0.11 -0.41 -0.5 -0.99 -0.71 -0.71 0.46 0.15 0.05 0.64 0.37 0.16 0.1 0.23 0.04 0.59 0.28 0.16 0.41 -0.1 0.49 0.35 -0.19 -0.12 0.12 0.33 0.01 0.03 -0.35 0.32 0.88 0.55 0.05 0.43 0.08 0.14 0.37 -0.19 0.99 At5g52520 248339_at
tRNA synthetase class II (G, H, P and S) family protein 2

tRNA charging pathway Arginine and proline metabolism | Aminoacyl-tRNA biosynthesis



1.19 2.59




















At1g75820 0.557 CLV1 CLAVATA1 receptor kinase (CLV1). Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). -3.38 0.51 0.35 0.53 -2.34 -0.93 -0.93 -0.93 -1.24 -1.24 -1.73 -0.23 -2.42 -1.22 -1.58 -2.42 -0.24 0.09 -0.9 -1.08 -0.14 -0.72 0.03 -0.08 -0.52 -0.01 0.28 0.14 -0.16 -0.25 0.16 0.28 0.06 0.19 -0.48 0.5 0.34 0.28 0.12 0.46 0.37 -0.15 -0.28 -0.01 -0.98 0.16 0.28 -0.86 -0.75 -0.39 0.26 0.42 0.08 -0.09 0.56 -0.21 -0.71 -0.3 -1.12 -0.16 -0.45 0.42 0.5 0.74 0.49 -0.4 -0.28 0.03 -0.11 0.5 0.92 0.65 0.13 0.47 0.25 0.38 0.46 -0.47 0.28 0.36 0.56 0.59 0.28 0.19 0.46 0.27 0.56 -0.07 0.15 0.72 0.74 0.62 0.5 0.39 0.19 0.03 0.3 0.38 0.81 -0.01 0.02 0.81 0.04 0.28 -0.26 -1.04 -0.81 -1.4 0.16 0.36 0.04 -0.1 -0.18 0.32 0.41 0.53 -0.09 -0.66 -0.5 -1.1 0.36 0.44 0.5 -0.22 -0.04 -0.51 0.22 0.78 0.28 -0.15 0.22 0.48 0.11 0.44 0.23 0.41 0 0.37 0.23 0.24 0.35 -0.69 0.66 0.24 -0.53 0.37 -0.19 0 0.04 -0.19 -1.12 0.39 0.33 0.66 0.22 -0.18 0.11 -0.38 -2.09 0.39 0.7 0.51 -0.75 -1.47 0.28 0.16 0.24 0.46 0.69 0.79 0.17 -0.16 0.04 0.79 0.3 0.28 0.39 0.39 0.39 0.39 0.39 0.39 0.39 0.39 0.19 0.49 -0.07 0.32 0.54 0.44 0.27 0.77 0.32 0.33 -0.19 -0.64 -0.2 -0.07 0.91 1.06 0.77 0.25 -2.43 -0.99 -0.36 1.12 0.31 2.29 0.59 0.44 0.06 0.01 0.39 -0.92 0.39 At1g75820 262728_at CLV1 CLAVATA1 receptor kinase (CLV1). Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). 6 signal complex formation | regulation of meristem organization | cell differentiation

Inositol phosphate metabolism | Nicotinate and nicotinamide metabolism | Benzoate degradation via CoA ligation



2.00 5.68




















At2g43920 0.557
similar to thiol methyltransferase 1 from Brassica oleracea -1.44 0.3 0.3 -0.28 -0.3 -0.96 -0.17 -0.35 -1.41 -0.41 -0.47 -0.18 -1.96 -0.33 -0.92 -1.25 -0.07 0.28 -0.41 -0.33 -0.39 -0.44 0.44 0 -0.16 -0.22 0.28 0.19 0.02 -0.11 -0.43 -0.01 -0.06 0.23 -0.61 0.16 -0.04 0.22 0.24 0.35 0.19 0.02 -0.27 -0.11 -1.06 0.2 0.12 -0.32 -0.15 0.23 0.11 0.6 0.34 0.25 0.17 0.13 -0.32 0.22 -0.19 0.06 -0.35 0.44 0.06 -0.02 0.16 -0.02 0.16 0.13 0.16 0.32 0.2 0.52 0.09 0.78 0.28 0.27 0.43 0.17 0.2 0.36 0.2 0.17 -0.08 -0.14 0.35 0.15 0.41 0.03 0.3 0.42 -0.11 0.14 0.34 0.39 0.18 -0.01 0.28 -0.02 0.56 -0.25 0.33 0.11 0.08 -0.08 -0.09 -0.06 -1.05 -0.73 0.01 -0.32 -0.3 -0.26 0.16 0.18 0.16 0.27 0.28 -0.11 -0.75 -0.81 0.35 -0.28 -1.52 -2.52 -0.54 -0.76 0.19 0.28 -0.15 -0.18 -0.18 0.15 -0.03 -0.07 0.35 0.22 -0.03 0.48 0.24 0.28 0.28 -0.36 -0.66 -0.05 -0.39 0.48 0.34 0.21 0.18 -0.44 -0.88 0.67 0.36 0.21 -0.09 -0.16 -0.39 -0.21 0.43 0.27 0.69 0.23 0.03 -0.72 0.01 0.31 0.48 0.37 0.19 0.54 0.21 -0.55 -0.4 0.09 0.87 0.52 0.27 0.27 0.27 0.27 0.27 0.27 0.27 0.27 0.25 0.45 0.62 0.57 0.17 0.45 0.51 0.4 0.27 0.36 0.16 -0.43 -0.17 0.25 0 0.5 0.22 0.27 0.49 0.4 -0.12 -0.13 -1.28 1.68 0.56 0.33 0.38 -0.11 -0.03 -2.25 -0.1 At2g43920 267233_s_at
similar to thiol methyltransferase 1 from Brassica oleracea 4

carbon monoxide dehydrogenase pathway




1.46 4.21




















At3g52150 0.557
RNA recognition motif (RRM)-containing protein, similar to chloroplast RNA-binding protein cp33 (Arabidopsis thaliana) -1.53 0.19 0.4 1.06 -0.04 -0.54 -0.32 -0.19 -1.94 -1.07 -0.36 0.02 -2.31 -0.27 -0.86 -0.84 -0.08 -0.13 -0.69 -0.14 -0.83 -0.75 -0.01 -0.11 -0.59 -0.28 0.17 0.01 0.17 -0.27 -0.85 -0.03 0.24 0.11 -0.46 0.48 0.63 0.68 0.3 0.37 0.63 0.51 0.15 -0.2 -1.5 0.26 0.13 -0.65 -0.41 -0.41 0.23 0.48 -0.02 0.42 -0.23 0.28 -0.87 0.34 -0.82 0.12 -0.81 0.39 -0.05 0.35 0.28 0.02 -0.23 -0.16 0.13 -0.13 0.2 0.25 0.13 0.66 0.48 0.1 0.45 -0.3 0.36 0.28 0.28 -0.02 0.15 -0.2 0.16 0.56 0.49 0.45 0.09 0.45 -0.02 0.17 0.21 -0.14 -0.28 -0.2 0.18 0.48 0.35 0 -0.31 -0.21 0.22 0.28 -0.54 -1.48 -1.89 -2.14 -0.08 0.2 0.38 0.07 -0.08 0.33 0.09 0.09 0 -0.71 -0.72 -1.14 0 0.03 0.16 0.07 0.05 0.3 -0.03 0.48 0.08 -0.02 0 -0.28 0.04 -0.13 0.15 -0.22 0.31 0.51 0.55 0.2 0.55 0.07 -0.24 0.13 -0.42 0.59 0.07 0.18 -0.15 -0.08 -0.5 0.08 0.45 0.25 -0.08 -0.31 -0.5 -0.13 0.48 0.02 0.89 0.54 0.66 0.18 0.09 0.02 0.42 0.45 0.59 0.19 0.2 0.46 1.04 0.64 0.98 0.79 0.05 -0.21 -0.61 -1.17 -0.63 -0.65 0.08 -0.1 0.03 0.32 0.56 1.12 0.18 0.42 0.39 0.41 0.08 0.09 -0.18 -0.97 0.08 0.11 0.02 -0.01 0.33 -0.04 -0.53 -0.42 -2.5 1.56 1.5 1.24 0.42 -0.06 0.27 0.03 0.25 -0.92 2.97 At3g52150 252032_at
RNA recognition motif (RRM)-containing protein, similar to chloroplast RNA-binding protein cp33 (Arabidopsis thaliana) 4



mRNA processing in chloroplast


1.67 5.48




















At2g32540 0.556 ATCSLB04 encodes a gene similar to cellulose synthase -3.03 0.25 0.32 0.32 -0.97 -0.48 -0.75 -1.7 -1.9 -0.15 0.32 -1.15 -0.39 0.99 -3.11 -0.94 0.32 -0.21 0.47 0.32 -1.87 0.53 0.28 -0.55 -0.63 0 0.38 0.56 -1.12 -1.64 -0.53 0.33 -0.15 -0.35 -0.86 0.28 0.4 0.59 -0.15 0.56 0.33 1.2 1.04 -0.61 -1.73 0.32 -1.44 -1.84 -0.36 -0.16 -0.09 -0.73 0.17 -0.68 0.79 -1.03 -1.44 -1.03 -1.41 -1.03 0.01 -1.03 0.16 0.57 0.09 -0.22 0.9 1.26 0.9 0.4 0.32 0.32 0.32 0.32 0.32 0.32 0.32 -1.9 0.13 0.15 -0.37 0.04 -0.26 -0.96 0.65 0.32 0.32 0.32 0.32 0.6 -0.01 0.08 0.38 0.36 -0.34 -0.63 0.32 0.32 0.32 0.17 0.32 0.32 0.7 0.44 -0.3 1.47 -0.83 -0.82 0.32 0.32 0.32 0.32 0.89 0.76 0.07 0.01 0.02 1.53 -0.95 -1.21 0.32 0.32 0.32 0.32 0.32 0.21 0.56 0.51 -0.1 0.66 0.74 1.31 0.17 -0.86 0.32 0.32 0.32 0.32 0.32 0.32 0.32 -1.75 0.13 0.75 -1.79 0.6 0.79 1.46 2.99 -0.8 -4.49 0.32 0.16 0.32 0.32 0.32 0.32 -1.61 -1.3 0.44 0.83 0.04 0.65 -0.02 0.54 0.28 0.35 -0.61 0.78 0.32 0.32 0.32 0.32 0.32 0.55 0.13 0.32 0.32 0.32 0.32 0.32 0.32 0.32 0.32 0.32 0.32 0.32 0.32 0.32 0.32 0.32 0.82 1.65 0.39 0.23 2.71 0.45 -0.46 -2.24 -2.24 -0.25 0.31 0.44 -0.96 -1.99 1.78 0.32 0.32 0.36 -0.03 0.32 1.22 0.32 -1.91 0.32 At2g32540 267115_s_at ATCSLB04 encodes a gene similar to cellulose synthase 4

cellulose biosynthesis
Cell Wall Carbohydrate Metabolism | cellulose biosynthesis


2.90 7.48




















At1g17220 0.554
Similar to Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) from Phaseolus vulgaris -0.43 0.25 0.24 0.53 -0.36 -0.79 -0.68 -0.45 -1.43 -0.77 -0.57 -0.24 -1.79 -0.56 -1.12 -0.86 -0.34 0.08 -0.34 -0.41 -0.84 -0.7 0.01 -0.39 -0.45 -0.08 0.22 0.13 -0.11 -0.31 -0.31 0.26 0.14 0.06 -0.95 0.23 0.27 0.22 0.18 0.3 0.05 0.11 -0.04 -0.03 -1.17 0.14 -0.92 -0.61 -0.09 0.13 0.05 0.31 0.11 0.09 -0.12 -0.01 -1.01 0.01 -0.92 0.01 -0.78 0.12 -0.1 0.26 0.31 -0.06 -0.2 0.42 -0.09 0.5 0.13 0.07 -0.42 -0.02 0.35 -0.28 0.21 -0.8 0.28 0.21 0.1 0.04 -0.23 -0.39 0.33 0.04 0.05 0.24 0.28 0.56 0.15 -0.08 0.31 0.18 -0.22 0.07 0.64 0.04 0.34 -0.03 0.25 0.32 0.1 0.22 -0.24 -0.39 -0.9 -0.83 0.14 0.07 0.14 0.49 0.87 0.86 0.49 0.42 0.08 -0.13 -0.57 -0.8 0.62 0.28 0.01 0.11 0.01 0.28 -0.04 0.6 0.19 0.3 0.02 0.27 0.04 0.14 0.55 0.27 -0.22 0.18 0.42 0.32 0.15 -0.28 -0.72 0.2 0.28 0.22 0.65 0.45 0.55 -0.08 -0.3 0.4 0.08 0.5 0.39 0.36 0.16 -0.72 0.23 0.34 0.3 0.14 -0.14 -0.79 -0.3 0.18 0.16 0.2 0.41 0.09 -0.47 0.44 0.3 0.48 0.43 0.01 -0.14 0.48 -0.28 0.25 -0.38 0.22 0.95 0.52 0.46 0.84 0.63 0.78 0.47 0.18 0.64 0.56 0.4 0.31 0.32 -0.31 -0.15 0.22 -0.15 0.1 0.3 0.18 -1.65 -0.92 -3.76 0.62 0.19 3.11 0.09 0.17 0.28 0.37 -0.26 -2.25 0.94 At1g17220 262483_at
Similar to Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) from Phaseolus vulgaris 4


Translation factors Translation (chloroplast)


1.54 6.87




















At5g52100 0.554
weak similarity to dihydrodipicolinate reductase (Corynebacterium glutamicum) -0.7 -0.2 0.31 0.31 0.06 0.31 0.31 0.95 -1.87 -1.36 -0.22 -0.15 -2.63 -0.02 -1.05 -1.41 -0.15 -0.01 -1.12 -0.27 -0.61 -0.94 -0.06 -0.03 -0.52 -0.08 0.4 -0.06 -0.2 -0.33 -0.41 0.15 0.05 -0.03 -0.59 0.31 0.45 0.56 0.31 0.28 0.68 0.44 0.06 -0.28 -1.62 0.38 0 -0.79 -0.69 -0.65 0 0.7 0.05 0.51 -0.33 0.22 -0.89 0.37 -0.87 0.13 -0.84 0.55 -0.25 0.13 -0.21 -0.34 -0.04 0.14 -0.22 0.07 0.31 0.31 0.31 0.31 0.31 0.31 0.31 -0.81 0.11 0.17 0.63 0.48 0.37 0.06 0.31 0.31 0.31 0.31 0.31 0.31 0.62 0.37 0.57 0.28 -0.22 0 0.31 0.31 0.31 0.31 0.31 0.31 0.61 0.18 -0.42 -1.03 -2 -2.15 0.31 0.31 0.31 0.31 0.31 0.31 0.42 0.2 0.05 -0.46 -0.8 -1.12 0.31 0.31 0.31 0.31 0.31 0.31 0.35 0.16 0 0.33 0.2 0.19 -0.15 0.05 0.31 0.31 0.31 0.31 0.31 0.31 0.31 -0.1 -0.5 -0.28 -0.68 0.71 0.86 0.27 -0.1 -0.72 -1.4 0.31 0.31 0.31 0.31 0.31 0.31 0.11 0.77 0.31 0.67 0.5 0.44 0.38 0.61 0.35 0.34 0.61 0.31 0.31 0.31 0.16 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 0.31 -0.1 0.24 -0.42 -1.04 -0.48 -0.14 -0.12 0.35 0.34 -0.14 -2.15 -1.93 -1.87 0.12 -0.57 1.26 0.16 0.65 0.31 -0.53 0.31 -2.25 0.31 At5g52100 248402_at
weak similarity to dihydrodipicolinate reductase (Corynebacterium glutamicum) 2

lysine biosynthesis I Lysine biosynthesis Biosynthesis of Amino Acids and Derivatives | Lysin from aspartate


1.99 3.89




















At4g02510 0.553 TOC159 An integral membrane GTPase, functioning as a transit-sequence receptor for protein import into chloroplasts and is essential for the biogenesis of chloroplasts. Located in the outer chloroplast membrane. -0.72 0.27 0.25 0.43 0.08 -0.84 -0.37 -0.37 -1.04 -0.56 -0.26 -0.05 -1.12 -0.28 -0.89 -0.55 -0.35 -0.1 -0.3 -0.28 -0.7 -0.4 0.12 -0.05 -0.33 0.03 0.28 0.28 0.06 -0.25 -0.02 0.26 0.21 -0.11 -0.25 0.33 0.11 0.24 0.08 0.11 0.05 0.4 0.34 -0.01 -0.63 0.03 -1.12 -0.7 -0.16 -0.07 0.04 0.21 -0.17 0.08 -0.38 -0.11 -1.11 -0.03 -1.13 -0.03 -0.93 -0.05 -0.27 0.46 0.38 0.13 0.08 0.38 0.39 0.17 0.46 0.3 0.16 0.21 0.35 0.12 0.22 -0.75 0.2 0.21 0.13 0.01 0.06 -0.15 0.21 0.27 0.23 0.22 -0.01 0.16 0.2 0.25 0.23 0.17 0.12 -0.03 0.28 0.32 0.31 0.09 0.02 0.14 0.16 0.36 -0.7 -0.5 -0.87 -0.6 0.1 -0.02 0.05 0.07 0.16 0.24 -0.01 0.25 -0.25 -0.56 -0.61 -0.49 0.18 0.09 -0.25 -0.85 -0.26 -0.19 -0.3 0.53 -0.1 -0.01 -0.05 -0.05 -0.11 -0.08 0.42 0.2 0.07 -0.03 0.12 -0.03 0.09 -0.61 -0.5 0.21 0.35 0.04 0.22 0.28 0.23 -0.14 -0.15 0.17 0.16 0.17 -0.14 -0.03 0.32 -0.87 -0.5 -0.28 0.21 0.18 -0.11 0.09 0.57 0.28 0.13 0.03 0.14 0.35 -0.06 -0.13 0.33 0.49 0.11 0.15 0.24 0.16 -0.03 0.38 0.51 0.52 0.49 0.18 0.16 0.2 0.2 0.65 0.42 0.28 0.18 0.52 0.16 0.11 0.28 -0.09 0.2 0.26 -0.04 -0.39 -0.17 0.49 -0.59 0.43 -1.78 0.32 -0.26 2.25 0.38 -0.3 0.13 0.54 0.15 -0.38 1.48 At4g02510 255482_at TOC159 An integral membrane GTPase, functioning as a transit-sequence receptor for protein import into chloroplasts and is essential for the biogenesis of chloroplasts. Located in the outer chloroplast membrane. 9 transmembrane receptor activity | protein-chloroplast targeting protein targeting, sorting and translocation | transport routes | chloroplast transport

Chloroplastic protein import via envelope membrane | Toc apparatus


1.33 4.04




















At2g03750 0.551
sulfotransferase family protein, similar to steroid sulfotransferases (Brassica napus) -1.81 0.39 0.32 0.98 -0.43 -0.49 -0.07 0.13 -1.55 -0.89 -0.69 -0.16 -2.12 -0.05 -0.68 -1.15 -0.04 0.11 -0.98 -0.57 -0.73 -1.42 0.19 -0.32 -0.52 -0.2 0.37 0.11 0.1 -0.47 -0.56 0.1 -0.04 -0.09 -0.87 0.23 0.34 0.33 0.14 0.39 0.54 0.42 0.19 -0.34 -1.86 0.59 0.18 -0.98 -0.37 -0.13 -0.11 0.76 0.03 -0.03 -0.52 0.03 -1.14 0.08 -1 -0.17 -0.91 0.85 -0.18 -0.15 -0.06 -0.28 0.2 0.27 0.2 0.25 0.84 0.65 0.19 0.2 0.52 -0.28 0.49 -0.85 0.33 0.33 0.5 0.53 0.37 0.16 0.57 0.17 0.43 0.05 0.2 0.42 0.63 0.22 0.42 0.34 0.01 0.17 0.1 0.28 0.34 0.27 -0.16 0.32 0.61 -0.27 -0.78 -0.86 -1.38 -1.41 0.54 0.39 0.24 0.23 0.57 0.81 0.71 0.43 -0.03 0.32 -0.3 -0.15 0.85 0.3 -0.02 1.36 2.27 3.28 0.8 0.07 0.17 0.5 0.24 0.46 0.2 0.38 0.68 0.71 -0.03 -0.06 0.38 0.4 0.44 -1.47 0.5 -1.24 -1.5 0.48 1.24 0.27 -1.52 -3.99 -3.82 0.9 0.48 -0.11 0.38 0.32 0.52 0.02 -0.27 0.32 -0.55 0.5 0.34 0.02 -0.47 -0.07 -0.03 -0.18 0.84 0.71 0.31 -0.28 0.42 0.33 0.32 0.84 0.32 0.32 0.32 0.32 0.32 0.32 0.32 0.32 0.87 0.91 0.25 0.39 0.11 0.15 -0.01 0.12 0.4 -0.33 -0.66 -0.89 -0.03 0.22 -0.48 0.65 0.18 -0.05 -1.02 -1.98 0.07 0.26 -0.57 0.76 0.24 0.08 0.32 0.56 0.16 -3.62 0.47 At2g03750 264037_at
sulfotransferase family protein, similar to steroid sulfotransferases (Brassica napus) 2





triterpene, sterol, and brassinosteroid metabolism | brassinosteroid modulation
2.28 7.27




















At2g30390 0.551
ferrochelatase II, Protoheme ferro-lyase -1.21 0.09 0.25 0.25 -0.66 -0.81 -0.4 -0.16 -2.02 -1.13 -0.6 -0.43 -1.82 -0.41 -1.36 -1.35 -0.16 -0.04 -0.19 -0.67 -1.02 -0.75 0.37 -0.05 -0.12 -0.05 0.44 -0.13 -0.21 -0.44 -0.39 0.06 0.07 0.28 -0.94 0.23 0.3 0.16 0.19 0.25 0.19 0.02 0.15 0.08 -0.89 0 -1.03 -1.12 -0.41 -0.06 0.03 0.56 0.25 0.09 0 0.08 -0.92 0.18 -0.88 0.2 -0.51 0.49 0.09 -0.09 0.34 -0.05 -0.05 0.08 0.06 0.09 0.08 0.47 0.2 0.05 0.14 0.28 0.48 -1.17 0.17 0.14 0.01 -0.02 0.02 -0.41 0.22 0.07 -0.13 -0.2 0.18 0.24 0.02 0.04 0.37 0.28 0.06 -0.02 0.14 0.09 0 -0.03 -0.12 0.27 0.16 0.16 -0.07 0.14 -0.85 -0.3 0.47 0.18 -0.18 -0.01 0.15 0.41 0.22 0.43 0.43 0.43 -0.2 -0.36 0.1 0.02 -0.1 0.69 1.44 2.41 0.12 0.3 0.52 0.24 0.12 0.14 -0.09 -0.25 -0.13 -0.06 -0.06 0.07 0.22 0.2 0.4 -0.77 -1.23 0.53 0.18 0.67 0.82 0.31 -0.11 -0.63 -0.72 0.26 0.3 0.12 -0.04 0.28 0.63 -0.21 0.92 0.7 0.51 0.5 -0.23 -0.4 0.5 0.45 0.38 0.44 0.3 0.43 0.18 -0.04 0.75 0.61 0.37 0.56 0.11 0.12 -0.45 -0.14 -0.19 -0.2 0.62 0.22 0.3 0.25 0.18 0.44 0.02 0.07 0.26 0.18 0.49 -0.05 -0.12 -0.56 -0.17 0 0.38 0.22 -0.39 -0.24 -0.44 -1.1 -2.49 1.66 0.74 0.91 0.54 0.17 0.25 -0.05 0.1 -1.8 0.97 At2g30390 267471_at
ferrochelatase II, Protoheme ferro-lyase 10

biosynthesis of proto- and siroheme Porphyrin and chlorophyll metabolism Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Chlorophyll biosynthesis and breakdown
chlorophyll and phytochromobilin metabolism | phytochromobilin biosynthesis
1.79 4.90




















At3g01440 0.550
oxygen evolving enhancer 3 (PsbQ) family protein, photosystem II oxygen-evolving complex protein; -2.31 0.18 0.35 0.35 0.27 0.15 0.88 0.69 -2.02 -1.2 -0.28 -0.23 -3.56 -0.02 -1.36 -1.67 -0.32 -0.35 -1.04 -0.35 -1 -1.12 0.06 -0.22 -0.71 -0.31 0.09 0.17 0.11 -0.68 -0.81 0.12 0.24 0.08 -0.91 0.54 0.41 0.52 0.31 0.12 0.43 0.38 -0.2 0.09 -1.33 0.24 -0.72 -1 -0.71 -0.98 0.48 0.36 0.22 0.36 -0.04 0.18 -1.19 0.09 -0.88 0.35 -0.59 0.61 -0.09 0.31 0.25 -0.17 -0.28 0.05 -0.33 -0.27 0.35 0.35 0.7 0.35 -0.1 0.35 0.81 -1.41 0.1 0.32 0.3 0.27 0.11 -0.26 -0.1 0.7 0.35 0.35 -0.11 0.45 -0.33 0.28 0.22 0.35 -0.08 0.07 0.35 -0.27 0.35 0.21 0.35 0.81 -0.03 0.4 -1.1 -1.57 -2.49 -2.73 0.43 0.7 0.1 0.35 0.35 0.81 0.18 0.65 -0.22 -1.02 -0.95 -1.23 0.35 0.62 0.35 0.35 0.35 0.71 0.62 1.05 0.15 0.22 -0.48 0.2 -0.19 0.06 0.35 0.35 0.7 -0.09 0.35 0.35 0.81 -0.07 -1.79 0.36 -0.17 1.09 0.37 0.74 -0.18 -1.45 -0.98 0.35 0.7 0.35 0.35 0.35 0.81 -0.67 0.49 0.35 1.39 0.84 0.26 0.7 1.67 1.43 0.55 0.7 0.35 0.35 0.7 0.35 0.2 0.35 0.2 0.81 0.35 0.35 0.35 0.66 0.66 0.35 0.35 0.35 0.35 -0.32 0.7 0.35 0.35 -0.07 0.81 0.73 0.36 0.33 -0.14 -1.36 -0.53 -0.19 0.45 -0.3 -0.05 -0.35 -1.2 -3.9 -3.51 2.58 1.24 1.58 0.47 0.72 0.35 0.28 0.35 -2.66 0.35 At3g01440 258956_at
oxygen evolving enhancer 3 (PsbQ) family protein, photosystem II oxygen-evolving complex protein; 4 oxygen evolving complex | photosynthesis, light reaction


Photosystems | Photosystem II | Oxygen-evolving enhancer protein


2.29 6.48




















At4g27600 0.550
pfkB-type carbohydrate kinase family protein -1.26 0.05 0 0.28 -0.24 -0.53 -0.22 -0.04 -0.72 -0.4 -0.53 -0.17 -1.36 -0.32 -0.77 -0.82 -0.41 0.12 -0.37 -0.53 -0.33 -0.37 -0.08 -0.1 -0.49 -0.18 0.06 -0.15 -0.03 -0.38 -0.34 0.02 -0.02 0 -0.27 0.23 0.27 0.22 0.07 0.26 0.19 0.14 -0.22 -0.28 -0.9 -0.06 -0.43 -0.64 -0.31 -0.31 -0.14 0.3 -0.04 0.14 -0.11 0.19 -0.53 0.13 -0.6 0.28 -0.49 0.26 0.06 0.18 0.11 -0.02 -0.24 0.09 0.01 -0.27 0.42 0.45 0.66 0.47 0.43 0.19 0.47 -0.81 -0.01 0.19 0.2 0.11 0.07 -0.47 0.01 0.74 -0.01 0.09 0.25 0.48 0.21 0.14 0.25 0.19 -0.1 -0.42 0.35 0.98 0.3 0.03 0.05 -0.06 0.01 0.08 -0.83 -1.17 -1.27 -1.5 0.15 0.55 0.07 0.13 0.62 0.41 0.04 0.27 -0.31 -0.15 -0.62 -1 0.21 0.77 0.48 0.46 0.56 0.45 0.01 0.55 0.07 0.31 -0.01 0 -0.07 -0.21 0.43 -0.05 0.6 0.15 -0.06 -0.05 0.3 -0.12 -0.34 0.11 -0.69 0.21 0.54 0.08 -0.05 -0.69 -1.44 -0.07 0.45 -0.18 -0.95 -0.7 -0.32 -0.32 0.52 0.46 0.24 0.31 0.13 -0.35 0.25 0.27 0.16 -0.23 0.19 0.34 0.86 0.46 0.73 0.28 0.41 0.48 0.56 0.56 0.56 0.82 0.86 0.45 0.11 0.37 0.62 0.47 0.76 0.45 0.37 0.3 0.46 0.31 0.02 0.19 0.09 -0.66 -0.16 -0.18 0.04 0.16 0.08 -0.01 -1.03 0.13 -3.16 1.09 0.59 1.13 0.16 0.12 -0.27 -0.01 0.43 -0.49 -0.2 At4g27600 253858_at
pfkB-type carbohydrate kinase family protein 2
C-compound and carbohydrate metabolism ribose degradation




1.48 4.30




















At4g25050 0.548 ACP4 encodes an acyl carrier protein predominantly expressed in leaves. Gene expression is upregulated by light. -0.43 0.18 0.24 1.03 -0.19 -0.36 0.17 0.05 -1.92 -0.54 -0.35 -0.05 -2.56 -0.17 -0.56 -1.14 -0.02 0.42 -0.61 -0.12 -0.48 -0.83 -0.07 -0.08 -0.62 -0.41 0.2 0.19 0 -0.34 -0.72 -0.09 0.33 -0.03 -0.09 0.46 0.42 0.5 0.1 0.13 0.6 0.68 0.3 -0.27 -1.74 0.2 0.64 -0.28 -0.35 -0.73 0.24 0.33 0.02 0.42 -0.24 0.43 -0.75 0.24 -0.71 0.15 -0.65 0.32 0.05 0.33 0.21 0.12 0 -0.08 0.26 0.1 0.26 0.07 -0.21 0.25 0.73 0.48 0.53 -0.52 0.41 0.27 0.21 0.01 0.32 0.03 0.08 -0.25 0.33 0.67 0.43 0.45 0.26 0.15 0.16 -0.05 -0.34 0.06 0.09 -0.28 0.51 0.47 -0.04 0.13 0.07 -0.08 -1.21 -2.49 -3 -2.69 -0.5 -0.73 0.25 0.38 0.49 0.56 0.17 0 -0.7 -0.95 -0.83 -1.17 0.18 -0.56 -0.28 0.07 0.03 0.53 -0.08 0.53 -0.1 -0.16 -0.25 -0.24 0.08 0.05 0.59 -0.48 0.22 0.15 0.53 0 0.35 -0.01 -0.34 0 -0.56 0.07 0.25 0.38 0.2 0.51 0.02 0.06 0.11 0.75 0.71 0.28 -0.36 -0.05 0.59 0.74 0.33 0.18 0.2 0.32 -0.06 -0.23 -0.2 -0.08 0.3 0.08 -0.63 0.47 0.86 0.62 -0.11 0.06 0.24 0.24 0.24 0.24 0.24 0.24 0.24 0.24 0.03 0.41 -0.12 0.74 0.4 0.4 0.42 0.57 0.28 0.4 0.2 -0.62 0.14 -0.03 -0.34 0.1 0.2 -0.31 0.12 -0.13 -1.48 0.86 0.24 0.67 0.22 0.35 0.71 0.21 -0.13 -0.23 2.54 At4g25050 254102_at ACP4 encodes an acyl carrier protein predominantly expressed in leaves. Gene expression is upregulated by light. 6 response to light | fatty acid biosynthesis


Leaf Glycerolipid Biosynthesis | Leaf Glycerolipid Biosynthesis in Plastid Synthesis of fatty acids in plastids

1.54 5.54




















At4g25080 0.548
similar to Magnesium-protoporphyrin O-methyltransferase (Synechocystis) 1 0.32 0.39 0.13 -0.27 -0.87 -0.28 -0.43 -1.83 -1.24 -0.49 0.07 -2.83 -0.37 -0.84 -1.21 -0.37 0.06 -0.89 -0.48 -0.78 -1.22 0.04 -0.25 -0.56 -0.22 0.15 0.01 -0.01 -0.43 -0.48 -0.12 -0.08 0.12 -0.79 0.28 0.42 0.39 0.18 0.32 0.41 0.34 -0.16 -0.33 -1.67 0.15 0.3 -0.85 -0.46 -0.38 0.11 0.42 -0.25 0.27 -0.42 0.11 -1.17 0.2 -1.12 0.08 -1.02 0.42 -0.27 0.28 0.11 -0.18 -0.26 -0.07 0.25 0.36 0.96 0.37 0.27 0.68 0.76 0.71 0.41 -0.77 0.27 0.28 0.51 0.32 0.39 -0.09 0.14 0.26 0.65 0.44 0.36 0.43 0.65 0.47 0.52 0.42 0.15 -0.14 0.27 0.4 0.65 0.14 0.02 -0.16 0.28 0.15 -0.65 -1.21 -2.04 -3.03 0.01 0.15 0.2 -0.16 0.45 -0.16 0.4 0.44 0.04 -0.39 -0.53 -1.13 0.47 0.22 -0.18 -0.75 -0.15 -0.16 0.12 0.28 0.24 0.41 0.28 0.23 0.19 0.23 0.89 -0.15 0.13 0.45 0.03 0.23 0.12 -0.31 0.57 0.02 -1.44 0.46 0.42 0.15 0.33 0.13 -0.87 0.23 0.6 0.48 0.22 0.01 -0.88 -0.09 0.59 0.2 0.47 0.37 0.48 0.41 0.54 0.04 0.3 0.32 0.89 0.27 0.93 1.04 0.97 0.13 0.53 0.18 0.41 0.31 0.57 0.03 0.27 0.07 0.15 0.25 0.61 0.08 -0.01 0.56 0.56 0.51 0.4 0.3 0.05 0.13 -0.41 -0.9 -0.26 -0.23 -0.3 0.16 0.43 -0.26 -1.01 -1.24 -1.55 1.74 0.7 0.96 0.45 0.07 0.12 -0.6 0.11 -2.02 1.61 At4g25080 254105_at
similar to Magnesium-protoporphyrin O-methyltransferase (Synechocystis) 9 magnesium protoporphyrin IX methyltransferase activity | chlorophyll biosynthesis secondary metabolism
Porphyrin and chlorophyll metabolism Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Chlorophyll biosynthesis and breakdown
chlorophyll and phytochromobilin metabolism | chlorophyll biosynthesis
1.94 4.76




















At3g52380 0.547 CP33 similar to chloroplast RNA-binding protein (cp33) (Arabidopsis thaliana) -0.91 -0.06 0.24 -0.4 -0.08 -0.75 -0.55 -0.66 -1.68 -1.07 -0.61 0.1 -2.29 -0.67 -0.55 -0.97 -0.54 -0.12 -0.75 -0.35 -0.72 -0.85 -0.02 -0.13 -0.12 -0.1 0.2 0.14 -0.01 0.07 -0.52 -0.18 0.14 0.07 -0.32 0.15 0.24 0.3 0.21 -0.02 0.47 0.49 0.44 0.01 -0.95 0.36 0.86 -0.46 -0.52 -0.37 0.02 0.24 -0.15 0.2 -0.37 -0.09 -0.73 -0.02 -0.75 0.17 -0.45 0.06 -0.04 0.65 0.19 -0.15 -0.35 -0.09 -0.13 -0.62 0.6 0.56 0.66 0.38 0.1 0.34 0.36 -0.68 0.46 0.21 0.44 0.27 0.22 -0.03 0.4 0.31 0.52 -0.12 0.75 -0.04 0.2 0.23 0.15 0.01 -0.22 -0.33 0.07 0.22 0.23 -0.39 0.28 -0.34 0.32 0.33 -0.73 -1.75 -2.29 -2.59 0.73 0.45 0.49 0.01 0.26 -0.05 0.18 0.17 -0.32 -0.5 -0.38 -0.69 0.66 0.51 0.32 -0.37 0.53 0.08 -0.07 0.67 0.44 0.2 0.02 -0.22 -0.13 -0.31 0.59 0.44 0.4 0.82 -0.04 0.59 0.2 -0.14 -0.96 0.27 -0.23 0.69 0.05 0.16 -0.09 -0.4 -0.32 0.55 0.51 0.53 -0.03 0.3 -0.35 -0.6 0.48 -0.13 0.86 0.65 0.53 0.68 0.48 -0.02 -0.17 0.25 0.81 0.44 0.15 0.64 0.4 -0.08 0.3 -0.11 0.03 -0.08 -0.05 0.47 0.53 0.46 0.57 -0.12 -0.02 0.43 0.6 0.54 -0.1 0.37 -0.02 0.59 0.41 0.46 -0.03 -0.69 0.02 -0.55 0.02 0.07 -0.09 0.23 -0.19 -0.32 -2.14 -0.03 -0.67 2.04 0.56 0.45 0.27 0.06 0.07 -0.95 2.16 At3g52380 256678_at CP33 similar to chloroplast RNA-binding protein (cp33) (Arabidopsis thaliana) 4
biogenesis of chloroplast

mRNA processing in chloroplast


1.59 4.75




















At3g59980 0.544
tRNA-binding region domain-containing protein 0.02 0.15 0.23 0.97 0.08 -0.18 -0.15 -0.15 -0.71 -0.08 -0.25 0.16 -1.13 -0.35 0.02 -0.3 -0.26 0.13 -0.34 -0.33 -0.15 -0.4 0.17 -0.04 -0.15 0.03 0.18 0.11 0.06 -0.07 -0.21 -0.04 0.28 -0.04 -0.22 0.15 0.1 0.24 0.06 -0.06 0.45 0.64 0.62 0.1 -0.46 0.05 0.25 -0.28 -0.37 0.04 -0.02 0.27 -0.05 0.03 -0.35 0.07 -0.85 0.17 -1.02 -0.01 -0.73 0.23 -0.09 0.54 0.28 -0.01 -0.19 -0.27 0.01 0.19 0.14 -0.11 0.03 0.1 0.11 0.18 -0.04 -0.34 0.56 0.14 0.31 0 0.2 0.27 0.13 0 0.12 0.04 0.15 0.3 0.21 0.14 0.11 -0.33 -0.1 0.03 0.08 0.05 0.19 0.07 -0.08 -0.06 0.4 0.42 -0.54 -1.24 -1.3 -1.26 -0.05 -0.08 0.12 -0.2 -0.09 -0.12 0.27 0.23 -0.55 -0.9 -0.39 -0.43 0.25 0.04 -0.2 -0.61 -0.25 -0.22 -0.17 0.66 0.22 -0.06 -0.19 -0.44 -0.2 -0.09 0.33 0.13 -0.21 0.31 -0.02 0.05 0.44 -0.26 -0.71 0.36 -0.1 0.28 0.33 0.02 -0.55 -0.92 -0.33 0.13 0.28 0.27 -0.07 -0.27 -0.76 -0.66 0.06 0.34 0.52 0.42 0.48 -0.23 0.01 -0.25 -0.23 0.17 0.21 0.01 -0.12 0.1 0.07 0.38 0.03 0.37 0.08 0.47 0.5 0.64 0.28 0.37 0.5 0.44 0.26 0.11 0 -0.14 -0.26 -0.09 -0.09 0.59 0.21 0.17 -0.01 -0.64 0.31 0.03 -0.18 -0.07 0.15 0.01 0.73 -0.33 -1.2 2.27 0.21 0.18 0.7 -0.07 0.2 0.45 -0.08 -0.74 1.17 At3g59980 251442_at
tRNA-binding region domain-containing protein 2
protein synthesis | aminoacyl-tRNA-synthetases tRNA charging pathway




1.28 3.58




















At3g10230 0.543 LYC Encodes lycopene cyclase which catalyzes the formation of beta rings in lycopene. -0.62 0.39 0.35 0.31 -0.41 -0.77 -0.16 -0.3 -0.69 -0.65 -0.42 -0.04 -0.52 -0.34 -0.72 -0.66 -0.37 -0.07 -0.39 -0.48 -0.69 -0.56 0.05 -0.26 -0.4 -0.12 0.12 0.11 -0.14 -0.48 -0.28 0.15 -0.23 -0.08 -0.48 0.34 0.25 0.14 0.21 0.24 -0.07 -0.05 -0.18 -0.2 -1 0.18 -0.87 -0.83 0.02 -0.31 0.19 0.36 0.18 0.07 0.04 -0.06 -0.72 -0.17 -0.66 -0.13 -0.47 0.26 0.08 -0.08 -0.01 -0.23 0.18 -0.06 0.07 0.19 0.63 0.28 0.36 0.52 0.34 0.54 0.34 -0.67 -0.04 0.26 0.19 0.28 0.03 -0.22 0.11 0.13 0.45 0.22 0.13 0.28 0.18 0.22 0.34 0.53 0.04 0.01 0.12 0.33 0.35 0 0.15 0.18 -0.05 0.01 -0.33 -0.03 -0.81 -0.98 0.03 -0.02 0.09 0 0.53 0.21 0.16 0.28 0.08 0.06 -0.63 -0.69 0.24 0.15 -0.2 -0.57 0.02 -0.3 0.34 0.45 0.01 0.22 0.13 0.47 0.19 -0.04 0.27 -0.12 -0.18 0.32 0.26 0.33 0 -0.7 -0.44 0.23 0.12 0.35 0.43 0.47 0.79 0.34 -1.04 0.35 0.52 0.5 0.51 0.45 -0.61 -0.91 0.1 0.03 0.35 0.07 -0.08 -0.33 0.21 0.27 0.51 0.03 0.34 0.27 0.43 0.23 0.28 -0.07 0.68 0.2 0.25 0.37 0.21 -0.82 -0.5 -0.34 0.14 0.11 0.56 0.17 0.27 0.52 0.31 0.4 0.37 0.31 0.1 0.31 -0.13 -0.19 -0.31 -0.17 -0.54 0.24 0.22 -0.04 -0.56 -0.45 -0.67 0.66 0.16 0.98 0.32 0.23 -0.22 0.11 0.17 -1.46 0.51 At3g10230 259140_at LYC Encodes lycopene cyclase which catalyzes the formation of beta rings in lycopene. 10 carotene biosynthesis | lycopene beta cyclase activity
carotenoid biosynthesis Biosynthesis of steroids Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Carotenoid biosynthesis
Carotenoid and abscisic acid metabolism | carotenid biosynthesis
1.24 2.44




















At5g35790 0.543
Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is more prevalent in developing organs but absent in the root. 0.53 0.28 0.23 0.64 -0.21 -1.26 -0.8 -0.34 -1.9 -1.04 -0.46 -0.18 -1.68 -0.1 -1.2 -0.95 -0.16 0.11 -0.72 -0.75 -0.78 -1.12 0.44 -0.34 -0.43 -0.12 0.21 0.27 -0.05 -0.38 -0.62 -0.09 -0.26 -0.15 -0.89 0.38 0.39 0.5 0.09 0.27 0.44 0.37 -0.11 -0.38 -1.42 0.08 -0.44 -1.03 -0.24 0 0.43 0.61 0.07 0.09 -0.26 -0.38 -1.06 0.04 -1.06 -0.04 -0.9 0.52 -0.02 -0.12 -0.28 -0.55 0 0.17 0.04 0.09 0.69 0.55 0.32 0.67 0.61 -0.5 0.85 -0.86 0.05 0.03 0.48 0.35 0.22 -0.08 0.28 0.21 0.53 -0.15 0 0.49 0.53 0.66 0.5 0.41 0.09 0.03 0.53 0.35 0.54 0.08 0.14 0.53 0.28 0.37 -0.78 -0.66 -1.54 -2.1 0.41 -0.12 0.28 0.36 0.54 0.65 0.39 0.45 -0.02 -0.18 -0.74 -1.05 0.91 0.18 0.56 -0.06 0.59 1 -0.03 -0.12 -0.28 0.68 0.38 0.41 0.1 0.17 0.28 -0.02 -0.42 0.56 0.18 -0.34 0.32 -0.61 1.28 0 -2.31 0.2 1.39 0.01 0.08 -1.27 -2.73 0.72 0.74 0.78 0.14 -0.02 -0.3 0.47 0.91 0.7 0.2 0.26 1.17 -0.21 0.34 0.26 0.16 0 0.85 0.51 0.21 0.1 0.51 0.28 0.24 0.48 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.55 0.99 -0.1 1.2 0.34 0.14 0.57 -0.04 -0.19 0.32 -1.07 -1.12 -0.36 -0.04 -0.61 0.47 0.12 -0.15 -1.07 -1.34 -3.66 1.92 0.84 2.59 0.26 -0.1 0.23 -0.25 -0.09 -2.8 2.29 At5g35790 249694_at
Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is more prevalent in developing organs but absent in the root. 10 glucose-6-phosphate 1-dehydrogenase activity | glucose metabolism | pentose-phosphate shunt, oxidative branch C-compound and carbohydrate metabolism | pentose-phosphate pathway oxidative branch of the pentose phosphate pathway Pentose phosphate pathway | Glutathione metabolism Intermediary Carbon Metabolism


2.13 6.25




















At3g14110 0.542 FLU tEncodes a novel coiled-coil, TPR domain containing protein that is localized to the chloroplast membrane and is involved in chlorophyll biosynthesis. Mutants accumulate protochlorophyllide, an intermediate in the chlorophyll biosynthesis pathway, in dark -0.4 0.06 0.75 -0.33 -0.12 -0.66 -0.48 -0.21 -1 -0.51 -0.77 0.04 -1.17 -0.08 -0.53 -0.94 -0.28 0.1 -0.43 -0.24 -0.65 -0.66 -0.06 -0.33 -0.79 -0.18 0.15 -0.03 -0.21 -0.62 -0.37 0 -0.07 0.56 -0.15 0.5 0.45 0.38 0.09 0.41 0.67 0.16 -0.31 -0.25 -1.11 -0.12 -0.32 -0.34 -0.31 0.04 -0.51 0.52 -0.01 0.26 -0.2 0.03 -0.75 0.23 -0.76 -0.11 -0.93 0.37 -0.15 0.34 0.07 -0.23 -0.28 0 0.18 -0.23 0.43 -0.14 0.34 0.28 0.13 0.56 -0.01 -0.38 0.18 0.26 0.77 0.62 0.64 0.3 -0.1 0.16 0.14 -0.21 0 0.22 0.34 0.35 0.41 0.44 0.18 -0.26 -0.05 0.02 0.25 -0.08 0.14 -0.37 0.21 0.23 -0.15 -0.57 -0.99 -1.53 -0.09 0.2 0.36 0 0.7 0.15 0.28 0.23 0.17 -0.45 -0.28 -0.67 0.13 0.26 0.01 -0.96 -0.23 -0.15 -0.18 0.63 0.32 0.17 0.31 0.05 0.07 0.08 0.5 0.01 0.25 0.23 0.03 0.13 0.16 -0.28 -0.23 -0.1 -0.99 0.51 0.28 -0.1 -0.05 -0.34 -0.7 0.16 0.18 0.1 -0.37 -0.02 -0.66 -0.04 -0.23 0.35 0.56 0.63 0.39 0.13 0.06 0.28 0.23 0.24 0.53 0.37 0.19 0.79 0.84 0.09 0.44 0.39 0.15 0.23 0.54 0.79 0.51 0.2 0.45 0.27 0.34 -0.1 -0.07 0.24 -0.08 0.15 -0.26 0.64 -0.03 -0.12 -0.25 -0.62 -0.02 -0.26 -0.1 0.17 0.59 -0.2 -0.56 0.15 -1.49 1.2 0.19 0.19 0.27 -0.02 0.17 0.24 0.05 -0.37 0.82 At3g14110 257003_at (m) FLU tEncodes a novel coiled-coil, TPR domain containing protein that is localized to the chloroplast membrane and is involved in chlorophyll biosynthesis. Mutants accumulate protochlorophyllide, an intermediate in the chlorophyll biosynthesis pathway, in dark 10 chlorophyll biosynthesis


Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Regulatory enzymes
chlorophyll biosynthesis
1.41 2.72




















At3g48720 0.542
transferase family protein, similar to hypersensitivity-related hsr201 protein - Nicotiana tabacum -1.2 -1.15 0.33 0.33 -0.08 -0.9 0.07 0.18 -1.74 -0.84 -0.47 -0.4 -2.95 -0.2 -0.92 -1.37 0.25 -0.02 -0.91 -0.37 -0.69 -1.2 0.27 0.3 -0.47 -0.53 -0.05 0.25 0.3 -0.12 -0.85 -0.5 0.11 0.12 -1.09 0.6 0.65 0.68 0.09 0.49 0.27 -0.24 -0.47 -0.06 -1.92 0.81 1.65 -0.95 -0.14 -0.65 0.08 0.87 0.36 0.28 0.22 0.24 -0.85 0.3 -1.05 0.14 0.4 0.92 0.38 0.25 0.07 -0.47 0.25 -0.56 -0.12 0.45 0.33 0.33 0.33 0.33 0.33 0.33 0.33 -1.27 0.81 0.35 0.6 -0.08 0.28 0.39 0.33 0.33 0.33 0.33 0.33 0.33 0.69 0.72 0.63 -0.11 0.35 0.46 0.33 0.33 0.33 0.33 0.33 0.33 0.56 0.34 0.8 -1.52 -1.62 -3.51 0.33 0.33 0.33 0.33 0.33 0.33 0.76 0.36 -0.01 -0.69 -0.81 -0.24 0.33 0.33 0.33 0.33 0.33 0.33 0.15 0.22 0.94 0.52 0.47 -0.67 0 0.36 0.33 0.33 0.33 0.33 0.33 0.33 0.33 0.22 1.22 -0.34 -2.84 0.59 0.24 0.59 -0.51 -2 -3.51 0.33 0.33 0.33 0.33 0.33 0.33 0.8 0.53 0.33 0.31 0.48 -0.41 -1.17 -0.49 -0.12 -0.18 0.45 0.33 0.33 0.33 0.33 0.33 0.33 0.33 0.33 0.33 0.33 0.33 0.33 0.33 0.33 0.33 0.33 0.33 0.33 0.33 0.33 0.33 0.33 0.33 -0.19 0.09 -0.72 -0.43 -1.64 -0.42 -0.07 -0.37 1.12 0.24 -0.36 -1.2 0.26 -2.7 2.81 1.28 0.84 0.76 -0.11 0.33 0.91 0.24 -3.74 0.33 At3g48720 252317_at
transferase family protein, similar to hypersensitivity-related hsr201 protein - Nicotiana tabacum 1
secondary metabolism | disease, virulence and defense | defense related proteins




acyltransferase, BAHD family 2.36 6.55




















At3g49470 0.542
nascent polypeptide-associated complex (NAC) domain-containing protein 0.37 0.19 0.32 0.75 -0.38 -0.98 -0.28 -0.28 -1.56 -0.79 -0.57 -0.09 -1.59 -0.35 -0.78 -0.7 -0.31 0.13 -0.56 -0.5 -0.52 -0.62 0.11 -0.14 -0.23 0 0.12 0.2 0 -0.14 -0.18 0.09 0.18 0.08 -0.76 0.27 0.38 0.4 0.12 0.32 0.48 0.41 0.23 -0.14 -0.99 0.14 0.18 -0.66 -0.22 -0.19 0.08 0.27 0.19 0.09 -0.17 -0.06 -1 0.01 -1.03 -0.13 -0.94 0.18 0.03 0.4 0.12 -0.17 -0.19 0.18 0.09 0.21 0.37 0.14 0.07 0.2 0.14 -0.22 0.13 -0.75 0.18 0.2 0.18 0.23 0.11 0.03 0.22 0.21 0.34 0.13 -0.11 0.31 0.21 0.12 0.11 0.21 -0.09 -0.11 0.22 0.15 0.38 -0.02 -0.33 -0.28 0.23 0.15 -0.56 -0.68 -1.24 -1.64 0.41 0.12 0.13 -0.11 -0.37 -0.32 0.38 0.3 -0.18 -0.03 -0.24 -0.37 0.32 -0.12 -0.78 -1.1 -0.75 -0.52 0.16 0.51 0.16 0.22 -0.12 0.1 -0.03 -0.11 0.51 0.32 0.09 0.28 0.25 0.15 0.44 -0.24 -0.64 0.14 0.03 0.39 0.34 0.18 0.19 -0.19 -0.47 0.37 0.17 0.41 0.05 0.12 -0.05 -0.28 0.1 0.43 0.57 0.2 0.16 0.41 0.4 0.28 0.17 0.32 0.54 0.41 0.39 0.66 0.14 0.39 0.32 0.56 0.09 0.17 0.21 -0.55 -0.49 -0.48 0.41 0.27 0.4 0.54 0.25 0.5 0.18 0.19 0.27 0.43 0.26 0.49 -0.27 -0.66 0.21 0.01 -0.25 -0.04 0.14 -0.12 -0.73 0.21 -0.85 0.7 0.23 1.26 0.07 0.28 0.37 0.28 0.06 -1.47 2.72 At3g49470 252277_at
nascent polypeptide-associated complex (NAC) domain-containing protein 2
protein synthesis | translational control
Transcription | Basal transcription factors



1.38 4.36




















At1g48350 0.540
ribosomal protein L18 family protein -0.43 0.1 0.52 0.35 -0.01 -0.47 0.01 -0.13 -1.9 -1 -0.28 -0.02 -2.97 -0.19 -0.57 -1.23 0.01 0.03 -0.8 -0.14 -1.04 -0.99 -0.08 -0.04 -0.61 -0.13 0.22 0.15 0.16 -0.43 -0.48 0.04 0.24 0.2 -0.21 0.4 0.61 0.65 0.24 0.33 0.5 0.56 0.11 -0.26 -1.43 0.21 0.51 -0.64 -0.65 -0.45 0.19 0.43 -0.15 0.3 -0.5 0.26 -0.93 0.38 -0.82 0.16 -0.84 0.34 0 0.47 0.46 0.08 0.01 -0.06 0.07 0.22 0.06 0.46 0.18 0.84 0.3 0.24 0.37 -0.31 0.48 0.24 0.16 -0.08 -0.07 -0.32 0.16 0.08 0.34 -0.01 0.14 0.56 0.18 -0.02 0.08 -0.05 -0.43 -0.07 0.31 0.12 0.54 -0.01 0.06 0.01 0.23 0.25 -0.18 -1.22 -1.85 -2.37 0.22 0.07 0.17 -0.09 0.41 -0.01 0.33 0.28 0.13 -0.39 -0.55 -0.93 0.34 -0.15 -0.22 -0.67 -0.32 -0.28 0.04 0.61 0.05 -0.08 -0.18 -0.28 -0.07 0.05 0.32 -0.03 -0.23 0.18 -0.08 0.3 0.42 0.13 -0.39 0.05 -0.3 0.37 0.59 0.1 -0.32 -0.11 0.09 0.56 0.26 0.75 0.01 0.3 -0.11 -0.18 0.07 0.22 0.6 0.6 0.37 0.19 -0.3 -0.2 0.07 0.27 0.27 0.48 0.05 0.74 0.19 0.28 0.68 0.5 0.26 0.18 -0.06 -0.43 -0.34 0.06 0.56 0.67 0.43 0.51 0.15 0.67 -0.07 0.23 0.46 0.68 0.15 0.21 -0.22 -0.91 0 0.28 0.1 0.16 0.38 -0.35 -0.38 -0.34 -3.21 1.81 0.87 1.29 0.07 0.22 0.27 0.02 -0.03 -0.56 1.95 At1g48350 262235_at
ribosomal protein L18 family protein 2


Ribosome



1.60 5.16




















At2g39470 0.539
photosystem II reaction center PsbP family protein -3.12 0.24 0.31 0.54 -0.08 -0.41 -0.06 -0.09 -1.66 -1.47 -0.11 -0.02 -3.85 0.16 -0.37 -1.53 0.06 -0.03 -0.8 0 -0.68 -1.52 0.06 -0.05 -0.31 -0.06 0.22 -0.08 -0.04 -0.23 -0.38 -0.11 0 0.3 -0.48 0.39 0.38 0.41 0.26 0.38 0.28 0.22 -0.28 -0.05 -1.87 0.41 -0.51 -0.88 -0.74 -0.35 0.13 0.61 -0.03 0.44 -0.26 0.35 -0.85 0.41 -0.87 0.41 -0.76 0.69 -0.27 0.04 0.07 -0.2 -0.08 0.09 -0.12 0.27 0.1 0.42 0.31 0.18 0.28 0.02 0.25 -0.6 0.14 0.18 0.34 0.17 -0.01 -0.18 0.15 0.36 0.44 0 -0.07 -0.14 0.21 0.1 0.25 0.32 -0.12 0.03 0.03 0.19 0.01 0.46 -0.18 0.2 0.06 0.21 0.07 -0.6 -1.63 -2.49 0.61 0.7 0.75 0.5 0.49 0.26 0.45 0.49 0.44 -0.14 -0.73 -1.07 0.25 0.39 0.3 0.85 1.08 1.15 0.62 0.37 0.01 0.15 0 0.21 -0.13 0.15 0.27 0.44 0.92 0.5 0.44 0.05 -0.11 -0.43 0.1 0.21 -1 0.73 0.94 0.44 0.23 -0.59 -0.78 0.38 0.79 0.74 0.64 0.5 0.73 -0.37 0.43 0.54 0.85 0.35 0.22 -0.16 0.49 0.27 0.4 0.49 0.54 0.46 0.56 0.05 0.35 0.6 0.17 -0.16 0.31 0.31 0.31 0.31 0.21 0.31 0.31 0.46 0.44 0.27 0.3 -0.25 0.06 -0.04 0.16 0.51 0.28 0.28 -0.33 -1.28 -0.56 -0.1 0.02 0.16 0.15 -0.47 -0.65 -3.08 -5.24 2.76 0.92 1.26 0.35 0.84 0.33 -0.65 -0.15 -1.45 0.28 At2g39470 266979_at
photosystem II reaction center PsbP family protein 2



Photosystems | additional photosystem II components | psbP family of thylakoid proteins


2.22 8.00




















At2g35500 0.538
low similarity to shikimate kinase precursor from Lycopersicon esculentum -1.41 0.24 0.25 0.25 -0.48 0.25 0.25 0.25 -1.39 -1.39 -0.54 0.12 -2.34 -0.28 -0.93 -1.58 -0.21 -0.48 -0.81 -0.19 -1.27 -1.27 -0.09 -0.44 -0.85 -0.3 0.16 -0.03 0 -0.72 -0.7 0.22 0.31 -0.03 -0.53 0.32 0.32 0.38 -0.03 0.19 0.28 0.06 -0.09 -0.24 -1.04 0.26 -0.75 -1.05 -0.68 -0.61 0.34 0.39 -0.05 0.26 -0.19 0.19 -0.81 0.31 -0.94 0.38 -0.85 0.5 0.22 0.56 0.35 -0.17 -0.31 0 0.38 0.02 0.25 0.25 0.25 0.25 0.25 0.25 0.25 -0.84 0.54 0.16 0.54 0.6 0.65 0.36 0.25 0.09 0.25 0.25 0.25 0.25 0.31 0.3 0.26 0.21 0.34 0.1 0.25 0.25 0.25 0.25 0.25 0.25 0.4 0.41 -0.57 -1.12 -1.42 -1.97 0.25 0.25 0.25 0.25 0.25 0.25 0.27 0.37 -0.06 -0.86 -0.65 -1.34 0.25 0.25 0.25 0.25 0.25 0.25 -0.04 0.64 0.31 0.3 0.09 -0.1 0.14 0 0.25 0.25 0.25 0.25 0.25 0.25 0.25 -0.22 -0.4 0.34 -0.74 0.63 0.67 -0.11 -0.22 -0.24 -0.49 0.25 0.25 0.47 0.25 0.25 0.25 -0.04 0.72 0.39 0.92 0.7 0.46 0.87 1.01 0.54 0.66 0.59 0.25 0.25 0.25 0.25 0.25 0.25 0.25 0.25 0.04 -0.17 -0.27 -0.69 -0.39 -0.15 0.22 -0.07 0.25 0.25 0.25 0.25 0.25 0.07 0.25 0.62 0.22 -0.09 -0.36 -0.9 0.37 0.35 -0.11 0.27 0.21 0.38 -1.68 -0.25 0.25 0.25 0.25 0.25 -0.04 -0.24 0.25 0.1 0.25 -1.36 1.36 At2g35500 266608_at
low similarity to shikimate kinase precursor from Lycopersicon esculentum 2 aromatic amino acid family biosynthesis, shikimate pathway
chorismate biosynthesis


Shikimate pathway | chorismate biosynthesis
1.89 3.69



















































































































































































































































































page created by Juergen Ehlting 07/06/06