Co-Expression Analysis of: | CYP71B9 (At2g02580) | Institut de Biologie Moléculaire des Plantes | _____________________________________________ | ____________________________________ | ____________________________________ | ____________________________________ | ____________________________________ | ____________________________________ | ____________________________________ | ____________________________________ | ____________________________________ | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
________________________ | _____________________________________________ | CYPedia Home | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Hormones etc. Data Set | save / view heatmap as: | OpenOffice Table | annotation details for co-expressed genes can be found to the right of the heatmap | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
MS Excel Table | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
save / view all data as: | Tab delimited Table | For further information on the experiments please go to the Genevestigator database using the experiment-ID given in brackets. | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
shown are a maximum of 50 genes with r>0.5 (If more co-expressed genes with r>0.5 exist, they can be saved as Tab delimited data only) | magnitude of change [log2(treatment/control)] | 0 | 0.3 | 0.6 | 0.9 | 1.2 | 1.5 | 1.8 | 2.1 | 2.4 | 2.7 | >2.99 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
greater than zero | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
less than zero | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Locus | r-value | Name | Description | ethylene, 3h, petiole (13) | mock, 30min, seedling (110) | IAA, 30min, seedling (110) | IAA, 1h, seedling (110) | IAA, 3h, seedling (110) | zeatin, 30min, seedling (110) | zeatin, 1h, seedling (110) | zeatin, 3h, seedling (110) | GA3, 30min, seedling (110) | GA3, 1h, seedling (110) | GA3, 3h, seedling (110) | ABA, 30min, seedling (110) | ABA, 1h, seedling (110) | ABA, 3h, seedling (110) | MJ, 30min, seedling (110) | MJ, 1h, seedling (110) | MJ, 3h, seedling (110) | ACC, 30min, seedling (110) | ACC, 1h, seedling (110) | ACC, 3h, seedling (110) | BL, 30min, seedling (110) | BL, 1h, seedling (110) | BL, 3h, seedling (110) | ABA, 3 uM, imbided seed (116) | ABA, 30 uM, imbided seed (116) | GA, 3h, imbibed seed (119) | GA, 6h, imbibed seed (119) | GA, 9h, imbibed seed (119) | GA, 3h, imbibed seed (134) | GA, 6h, imbibed seed (134) | GA, 9h, imbibed seed (134) | GA, 30min, whole plant (99) | GA, 60min, whole plant (99) | GA, 3h, whole plant (99) | IAA, 0.1uM, 1h, seedling (144) | IAA, 0.1uM, 3h, seedling (144) | IAA, 1uM, 1h, seedling (144) | IAA, 1uM, 3h, seedling (144) | ppi, 3h, seedling (113) | ppi, 12h, seedling (113) | uni, 3h, seedling (113) | uni, 12h, seedling (113) | brz220, 3h, seedling (113) | brz220, 12h, seedling (113) | brz91, 3h, seedling (113) | brz91, 12h, seedling (113) | pac, 3h, seedling (113) | pac, 12h, seedling (113) | px, 3h, seedling (113) | px, 12h, seedling (113) | pno8, 3h, seedling (113) | pno8, 12h, seedling (113) | ibup, 3h, seedling (113) | B9, 3h, seedling (113) | AgNO3, 3h, seedling (113) | AVG, 3h, seedling (113) | Sal, 3h, seedling (113) | MG132, 3h, seedling (113) | 246T, 3h, seedling (113) | PCIB, 3h, seedling (113) | TIBA, 3h, seedling (113) | NPA, 3h, seedling (113) | CHX, 3h, seedling (113) | Colm, 3h, seedling (113) | ColPNO8, 3h, seedling (113) | ColBrz, 3h, seedling (113) | glucose, 8h, seedling (14) | sucrose, 8h, seedling (15) | deoxyglucose, 8h_seedling (14) | methylglucose, 8h, seedling (14) | K depleted, whole rosette (97) | K depleted, root (97) | Sulfate depleted, 2h, root (112) | Sulfate depleted, 4h, root (112) | Sulfate depleted, 8h, root (112) | Sulfate depleted, 12h, root (112) | Sulfate depleted, 24h, root (112) | mannitol, 8h, seedling (14) | CO2, 1000ppm, guard cell enriched (11) | CO2, 1000ppm, mature leaf (11) | CO2, high light, whole rosette (95) | CO2, medium light, whole rosette (95) | CO2, low light, whole rosette (95) | CO2, 2h, juvenile leaf (151) | CO2, 4h, juvenile leaf (151) | CO2, 6h, juvenile leaf (151) | CO2, 12h, juvenile leaf (151) | CO2, 24h, juvenile leaf (151) | CO2, 48h, juvenile leaf (151) | dark, 45min, seedling (109) | dark, 4h, seedling (109) | far red, 45min, seedling (109) | far red, 4h, seedling (109) | red pulse1, seedling (109) | red pulse2, seedling (109) | red, 45min, seedling (109) | red, 4h, seedling (109) | blue, 45min, seedling (109) | blue, 4h, seedling (109) | UV-A pulse1, seedling (109) | UV-A pulse2, seedling (109) | UV-AB pulse1, seedling (109) | UV-AB pulse2, seedling (109) | UV-A, 18h, mature leaf (72) | UV-B, 18h, mature leaf (72) | Locus | Probeset | Name | Description | Annotation score | GO.keywords | FunCat keywords | AraCyc annotations | KEGG annotations | BioPath annotations | AcylLipid category | Literature annotations | Gene family | 90% quantile of DE | max. DE |
At2g02580 | 1.000 | CYP71B9 | cytochrome P450 family protein | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | 0.39 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | 0.36 | -0.02 | -0.02 | 0.65 | 0.23 | -0.02 | -0.02 | 0.7 | -0.02 | -0.02 | -0.02 | 0.44 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.38 | -0.02 | -0.45 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | -0.02 | At2g02580 | 267267_at | CYP71B9 | cytochrome P450 family protein | 1 | cytochrome P450 family | 0.20 | 1.15 | |||||||
At1g69920 | 0.523 | ATGSTU12 | Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). | -0.22 | -0.22 | -0.22 | 0.87 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | 0.04 | -0.63 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | 2.39 | -0.22 | -0.22 | -0.22 | 6.06 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | 2.96 | -0.22 | 5.5 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -2.47 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | 2.02 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | -0.22 | 1.69 | -0.22 | -0.22 | 1.88 | -0.22 | -0.22 | -0.22 | At1g69920 | 260406_at | ATGSTU12 | Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). | 2 | toxin catabolism | Glutathione S-transferase, Tau family | 2.06 | 8.52 | ||||||
At2g24000 | 0.521 | serine carboxypeptidase S10 family protein | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | 0.82 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | At2g24000 | 266564_at | serine carboxypeptidase S10 family protein | 2 | serine carboxy peptidase like, clade II | 0.00 | 0.83 | |||||||||
At5g24550 | 0.510 | glycosyl hydrolase family 1 protein; similar to anther-specific protein ATA27 (Arabidopsis thaliana) | -0.06 | -0.06 | -0.06 | -0.65 | -0.06 | -0.06 | -0.65 | -0.06 | -0.06 | 0.01 | -0.06 | -0.06 | -0.65 | -0.06 | -0.06 | -0.65 | -0.06 | -0.06 | 1.15 | -0.06 | -0.06 | -0.65 | -0.06 | -0.06 | -0.06 | -0.52 | -0.06 | -0.06 | -0.52 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | 0.04 | -0.47 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | 3.19 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | 5.42 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | -0.06 | At5g24550 | 249744_at (m) | glycosyl hydrolase family 1 protein; similar to anther-specific protein ATA27 (Arabidopsis thaliana) | 1 | Aminosugars metabolism | Nucleotide sugars metabolism | Glycan Biosynthesis and Metabolism | Glycoside Hydrolase, Family 1 | 0.46 | 6.07 | ||||||||
At2g15420 | 0.504 | myosin heavy chain-related | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.42 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | 1.45 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | At2g15420 | 263562_at | myosin heavy chain-related | 2 | gluconeogenesis | glycerol degradation II | serine-isocitrate lyase pathway | formaldehyde assimilation I (serine pathway) | sorbitol fermentation | fructose degradation (anaerobic) | non-phosphorylated glucose degradation | acetate fermentation | glycolysis I | glyceraldehyde 3-phosphate degradation | glycolysis IV | 0.00 | 1.87 | |||||||||
At5g54010 | 0.504 | glycosyltransferase family protein | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.42 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | 1.42 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | -0.01 | At5g54010 | 248211_at | glycosyltransferase family protein | 1 | flavonol biosynthesis | Phenylpropanoid Metabolism | Flavonoid and anthocyanin metabolism | Glycosyl transferase, Family 1 | 0.00 | 1.85 | |||||||
page created by Juergen Ehlting | 07/05/06 |