Co-Expression Analysis of: CYP72A11 (At3g14650) Institut de Biologie Moléculaire des Plantes

































































































































































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Organ and Tissue Data Set view / save heatmap as: OpenOffice table annotation details for co-expressed genes can be found to the right of the heatmap
















































































































































































MS Excel table
















































































































































































save / view all data as: Tab delimited Table For further information on the experiments please go to the Genevestigator database using the experiment-ID given in brackets.













































































































































































shown are a maximum of 50 genes with r>0.5 (If more co-expressed genes with r>0.5 exist, they can be saved as Tab delimited data only) magnitude of change [log2(sample / average)]  0   0.3   0.6   0.9  1.2   1.5   1.8   2.1   2.4   2.7   >2.99 










































































































































































greater than zero                                                         










































































































































































less than zero                                                         










































































































































































Locus r-value Name Description suspension cell, aphidicolin, 0h ( 5) suspension cell, aphidicolin, 2h (5) suspension cell, aphidicolin, 4h (5) suspension cell, aphidicolin, 6h (5) suspension cell, aphidicolin, 8h (5) suspension cell, aphidicolin, 10h (5) suspension cell, aphidicolin, 12h (5) suspension cell, aphidicolin, 14h (5) suspension cell, aphidicolin, 16h (5) suspension cell, aphidicolin, 19h (5) suspension cell, sucrose, 0h (6) suspension cell, sucrose, 2h (6) suspension cell, sucrose, 4h (6) suspension cell, sucrose, 6h (6) suspension cell, sucrose, 8h (6) suspension cell, sucrose, 10h (6) suspension cell, sucrose, 12h (6) suspension cell, 1d (19) suspension cell, 1d (19) suspension cell, 5d (19) suspension cell, 7d (19) suspension cell, senescing (20) protoplast (62) suspension cell, light (153) suspension cell, dark (153) callus, transdifferentiation A1 (78) callus, transdifferentiation A2 (78) callus, transdifferentiation A3 (78) callus, transdifferentiation A4 (78) callus, transdifferentiation A5 (78) callus, transdifferentiation A6 (78) seedling (59) seedling (137) seedling (138) seedling (143) seedling (144) seedling, cont. light, 26h (149) seedling, cont. light, 26h (149) seedling, cont. light, 34h (149) seedling, cont. light, 38h (149) seedling, cont. light, 42h (149) seedling, cont. light, 46h (149) seedling, cont. light, 50h (149) seedling, cont. light, 54h (149) seedling, cont. light, 58h (149) seedling, cont. light, 62h (149) seedling, cont. light, 66h (149) seedling, cont. light, 70h (149) seedling, cont. light, 74h (149) seedling, far red then white light (83) seedling, dark then white light (83) Cotyledon (87) Hypocotyl (87) Hypocotyl (139) leaf, dedifferentiation A01 (50) leaf, dedifferentiation A02 (50) leaf, dedifferentiation A81 (50) leaf, dedifferentiation A82 (50) leaf, dedifferentiation A301 (50) leaf, dedifferentiation A302 (50) leaf, dedifferentiation A481 (50) leaf, dedifferentiation A482 (50) leaf, dedifferentiation B01 (50) leaf, dedifferentiation B02 (50) leaf, whole rosette, 0h (56) leaf, whole rosette, 0h (56) leaf, whole rosette, 2h (56) leaf, whole rosette, 4h (56) leaf, whole rosette, 8h (56) leaf, whole rosette, 12h (56) leaf, whole rosette, 13h (56) leaf, whole rosette, 14h (56) leaf, whole rosette, 16h (56) leaf, whole rosette, 20h (56) leaf, whole rosette, 24h (56) leaf, whole rosette, 0h (56) leaf, whole rosette, 4h (56) leaf, whole rosette, 8h (56) leaf, whole rosette, 12h (56) leaf, whole rosette, 16h (56) leaf, whole rosette, 20h (56) leaf, mature, high light (68) leaf, mature, low light (68) leaf stage 7, petiol (88) leaf stage 7, proximal half (88) leaf stage 7, distal half (88) guard cell enriched (11) senescing leaf, Col5 (60) senescing leaf, Col0 (60) senescing leaf (88) cauline leaf (88) roots (87) whole roots, A. halleri (101) whole roots, A. petrea (101) roots (141) mature roots (23) lateral roots (24) lateral roots (29) roots, axillary buds, dormant (30) roots, axillary buds, active (30) Roots, N03 depleted, dex treated (64) Roots, N03 depleted (64) root elongation zone (79) stem (80) stem (88) stem, base (66) stem, tip (66) stem, 1st node (88) stem, base, injured with needle (8) shoot apex (87) shoot apex (87) shoot apex (88) apical region, vegetative, Col (94) apical region, reproductive, 3d, Col (94) apical region, reproductive, 5d, Col (94) apical region, reproductive, 7d, Col (94) apical region, vegetative, Ler (94) apical region, reproductive, 3d, Ler (94) apical region, reproductive, 5d, Ler (94) apical region, reproductive, 7d, Ler (94) flower, stage 9 (89) flower, stage 10 (89) flower, stage 12 (89) flower, stage 15 (89) flower-silique, stage I (84) flower-silique, stage II (84) flower-silique, stage III (84) flower bud, young (9) flower bud, old (9) flower (80) flower (92) flower (100) sepal, stage 12 (89) sepal, stage 15 (89) petal, stage 12 (89) petal, stage 15 (89) stamen, stage 12 (89) stamen, stage 15 (89) carpel, stage 12 (89) carpel, stage 15 (89) pedicel, stage 15 (89) pollen, uninucleate microspores (22) pollen, bicellular (22) pollen, tricellular (22) pollen, mature (22) pollen (74) silique, young (136) silique, old (136) silique, stage 3 (90) silique, stage 4 (90) silique, stage 5 (90) seed, stage 6 (90) seed, stage 7 (90) seed, stage 8 (90) seed, stage 9 (90) seed, stage 10 (90) seed, dry (116) seed, dry (117) seed, fresh (96) seed, dormant (96) seed, imbibed, 1h (117) seed, imbibed, 3h (117) seed, imbibed, 22°C (118) seed, imbibed, far red, 22°C (132) seed, imbibed, 4°C (118) seed, imbibed, far red, 4°C (132) seed, imbibed (116) Locus Probeset Name Description Annotation score GO.keywords FunCat keywords AraCyc annotations KEGG annotations BioPath annotations AcylLipid category Literature annotations Gene family 90% quantile of DE max. DE
At3g14650 1.000 CYP72A11 cytochrome P450 family protein -2 -2.97 -2.97 -2.97 -2.97 -2.97 -2.97 -2.97 -2.97 -2.97 -1.28 -2.97 -2.76 -2.97 -2.97 -2.97 -2.97 -2.97 -2.97 -1.09 -2.97 -1.29 -2.52 2.38 2.23 -2.93 -2.97 -2.97 -2.97 -2.97 -2.97 1.84 1 2.08 0.66 1.5 1.55 1.49 1.84 1.59 1.72 1.67 1.58 1.57 1.85 1.83 1.78 1.87 1.47 1.93 2.22 2.14 1.02 -0.28 2.54 1.9 1.43 1.35 1.11 1.25 1.43 0.97 0.42 0.04 2.54 2.06 2.08 2.22 2.45 2 2.37 2.58 2.56 2.65 2.6 1.47 2.34 2.21 2.21 1.78 2.04 1.61 1.25 1.8 1.91 1.82 1.11 1.51 0.49 1.34 2.11 -1.06 -0.32 -1.44 -1.52 -0.96 0.04 -0.86 0.61 0.99 -0.11 -0.15 -0.62 0.38 0.59 -2.06 -0.2 0.68 0.66 0.93 0.56 0.64 0.36 0.54 0.27 0.72 -0.69 -1.01 -1.09 -0.35 0.46 0.71 0.7 0.52 -0.88 -0.49 0.04 -1.04 -0.93 0.64 0.82 -0.18 1.31 0.61 -0.35 0.09 -1.72 0.28 0.18 0.5 1.78 -2.97 -2.97 -2.97 -2.97 -2.97 0.87 0.51 1.02 0.71 0.56 0.01 -0.42 -1.75 -1.99 -2.97 -1.98 -1.76 -1 0.61 -1.77 -1.52 -0.56 -0.56 0.32 0.44 0.65 At3g14650 258113_at CYP72A11 cytochrome P450 family protein 1






cytochrome P450 family 5.33 5.62
At3g14415 0.900
(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative -4.47 -4.47 -4.47 -4.47 -4.47 -4.47 -4.47 -4.47 -4.47 -4.47 -1.43 -1.87 -4.47 -4.47 -4.47 -4.47 -4.47 -4.47 -4.47 -4.47 -4.47 -2.48 -3.78 3 3.08 -4.46 -4.47 -4.47 -4.47 -4.47 -4.3 2.67 2 2.93 2.93 1.82 2.4 2.62 2.23 2.79 2.9 2.64 2.68 2.45 2.47 2.95 2.81 2.86 2.31 2.6 2.62 3.08 0.5 2.62 3.42 2.63 1.62 1.42 2.31 2.65 1.58 1.08 -1.9 -2.18 2.95 2.6 2.68 3.13 3.3 3.24 3.21 3.17 3.15 2.85 2.81 3.02 2.91 2.49 2.97 3.22 3.35 3.16 3.09 2.2 2.99 2.88 2.13 2.27 1.64 2.06 3.12 -4.22 1.51 0.35 -2.02 -2.83 -0.23 -4.47 1.37 1.52 -4.47 -3.85 -4.33 1.69 2.06 1.93 1.84 1.62 2.29 1.75 0.31 -0.79 -1.2 -0.83 -1 -1.88 0.11 -0.81 -1.27 -1.22 1.06 1.87 1.36 1.33 1.81 1.53 2.12 1.3 1.39 0.65 0.79 -0.61 2.76 2.04 -0.59 -0.51 -3.35 -1.49 0.01 1.22 2.92 -4.47 -4.47 -4.47 -4.47 -4.47 0.84 0.74 1.02 1.83 1.84 -1.86 -2.17 -4.47 -4.13 -4.47 -1.73 -1.79 -0.16 0.23 -1.96 0.01 0.54 0.54 1.6 1.65 1.68 At3g14415 258359_s_at (m)
(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative 4

photorespiration Glyoxylate and dicarboxylate metabolism Intermediary Carbon Metabolism


7.62 7.89
At3g14420 0.900
(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative -4.47 -4.47 -4.47 -4.47 -4.47 -4.47 -4.47 -4.47 -4.47 -4.47 -1.43 -1.87 -4.47 -4.47 -4.47 -4.47 -4.47 -4.47 -4.47 -4.47 -4.47 -2.48 -3.78 3 3.08 -4.46 -4.47 -4.47 -4.47 -4.47 -4.3 2.67 2 2.93 2.93 1.82 2.4 2.62 2.23 2.79 2.9 2.64 2.68 2.45 2.47 2.95 2.81 2.86 2.31 2.6 2.62 3.08 0.5 2.62 3.42 2.63 1.62 1.42 2.31 2.65 1.58 1.08 -1.9 -2.18 2.95 2.6 2.68 3.13 3.3 3.24 3.21 3.17 3.15 2.85 2.81 3.02 2.91 2.49 2.97 3.22 3.35 3.16 3.09 2.2 2.99 2.88 2.13 2.27 1.64 2.06 3.12 -4.22 1.51 0.35 -2.02 -2.83 -0.23 -4.47 1.37 1.52 -4.47 -3.85 -4.33 1.69 2.06 1.93 1.84 1.62 2.29 1.75 0.31 -0.79 -1.2 -0.83 -1 -1.88 0.11 -0.81 -1.27 -1.22 1.06 1.87 1.36 1.33 1.81 1.53 2.12 1.3 1.39 0.65 0.79 -0.61 2.76 2.04 -0.59 -0.51 -3.35 -1.49 0.01 1.22 2.92 -4.47 -4.47 -4.47 -4.47 -4.47 0.84 0.74 1.02 1.83 1.84 -1.86 -2.17 -4.47 -4.13 -4.47 -1.73 -1.79 -0.16 0.23 -1.96 0.01 0.54 0.54 1.6 1.65 1.68 At3g14420 258359_s_at (m)
(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative 4


Glyoxylate and dicarboxylate metabolism Intermediary Carbon Metabolism


7.62 7.89
At2g40490 0.897
similar to uroporphyrinogen decarboxylase (chloroplast) from Nicotiana tabacum, Hordeum vulgare, and Zea mays -2.57 -3.06 -3.06 -3.06 -3.06 -3.06 -3.06 -3.06 -3.06 -2.5 -1.39 -3.06 -3.06 -3.06 -3.06 -3.06 -3.06 -3.34 -3.06 -2 -3.06 -0.72 -1.18 1.75 1.27 -1.81 -2.38 -3.06 -2.47 -2.56 -2.17 1.81 -0.18 1.54 2.17 1.19 1.68 2 2.06 1.59 1.5 1.81 2.11 2.17 2 1.64 1.63 1.91 1.89 1.56 1.82 1.59 0.19 -0.09 1.74 0.89 -0.27 0.09 0.49 0.93 -0.23 0.04 -1.72 -1.39 1.84 1.45 1.45 1.36 1.54 1.74 1.49 1.43 1.92 1.96 1.47 1.94 2.54 2.61 2.22 1.74 1.87 2.34 2.42 1.6 1.77 1.42 1.12 1.01 1.06 -0.18 0.72 -1.69 -0.44 0.04 -1 -1.96 -0.72 -1.28 0.61 1.53 -1.42 -1.68 -1.44 0.67 0.11 -0.07 1.64 0.5 -0.3 2.31 1.64 0.66 0.97 1.25 1.14 0.68 1.03 0.72 0.55 0.48 1.13 1.14 0.55 0.25 0.73 0.68 1.63 0.68 0.85 0.91 1.36 1.01 0.56 -1.08 0.98 -0.11 -0.96 -0.93 0.4 0.8 2.13 -3.06 -3.06 -3.06 -3.06 -3.06 0.55 0.11 1.86 0.59 0.56 0.33 -0.16 -1.38 -1.71 -1.79 -1.33 -1.28 -1.48 0.33 -1 -1.1 -0.16 -0.16 -0.57 -0.78 0.74 At2g40490 255826_at
similar to uroporphyrinogen decarboxylase (chloroplast) from Nicotiana tabacum, Hordeum vulgare, and Zea mays 4 porphyrin biosynthesis
chlorophyll biosynthesis | biosynthesis of proto- and siroheme Porphyrin and chlorophyll metabolism Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Chlorophyll biosynthesis and breakdown
chlorophyll and phytochromobilin metabolism | chlorophyll and phyochromobilin biosynthesis
5.19 5.96
At1g17220 0.888
Similar to Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) from Phaseolus vulgaris -2.25 -2.93 -1.78 -1.1 -1.67 -1.98 -1.86 -1.67 -1.68 -1.83 -0.95 -1.22 -1.42 -1.25 -1.07 -1.75 -1.6 -1.38 -1.94 -1.96 -2.14 -2.41 -1.34 1.78 1.52 -2 -2.52 -2.46 -2.68 -1.88 -2.14 1.4 0.42 1.85 1.37 0.65 0.94 0.91 1.36 1.2 1.48 1.56 1.28 1.14 1.22 1.44 1.44 1.48 0.7 0.78 1.12 1.79 0.12 -1.42 2.19 0.99 0.86 0.48 0.71 1.15 0.65 0.16 -1.47 -0.84 1.84 1.69 1.34 1.38 1.77 1.81 1.59 1.78 1.84 1.55 1.75 1.66 2.13 1.87 2.06 1.92 2.19 2.12 2.11 1.22 1.76 1.76 0.79 0.9 0.56 0.56 1.6 -2.8 0.24 -2.14 -2.54 -2.79 -1.14 -2.17 0.5 0.9 -1.74 -1.63 -1.92 0.01 0.52 0.45 1 0.48 0.37 1.28 0.64 0.15 0.28 0.33 0.28 0.18 0.64 0.39 0.43 0.41 0.61 0.84 0.52 0.37 0.48 0.47 1 0.6 0.7 -0.09 0.6 0.82 1.43 0.53 0.34 0.24 -1.66 -0.17 0.16 0.52 1.4 -1.98 -2.14 -2.79 -2.79 -2.79 1.04 0.39 0.3 0.65 0.47 -0.23 -0.61 -1.97 -2.45 -2.42 -1.2 -0.7 -1.2 0.54 -1.08 -1.4 -0.26 -0.26 0 -0.33 -0.28 At1g17220 262483_at
Similar to Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) from Phaseolus vulgaris 4


Translation factors Translation (chloroplast)


4.36 5.13
At4g35250 0.879
low similarity to vestitone reductase (Medicago sativa subsp. sativa) -3.04 -3.04 -3.04 -3.04 -3.04 -3.04 -3.04 -3.04 -3.04 -3.04 -1.06 -3.04 -3.04 -3.04 -3.04 -3.04 -3.04 -3.04 -1.93 -2.25 -3.04 -1.9 0.55 3.1 3.29 -2.19 -2.45 -1.99 -3.04 -3.12 -2.04 2.47 0.18 2.89 2.23 0.97 2.04 1.77 1.33 1.08 1.56 2.27 2.18 1.95 1.27 1.21 1.77 2.33 1.63 2.52 2.77 2.7 0.65 0.02 3 1.22 0.02 -0.08 0.55 1.45 -0.12 -0.34 -1 -1.58 2.02 1.77 1.75 1.72 2.16 2.71 2.46 2.79 2.8 2.43 1.88 2.88 3.31 2.78 2.4 2.36 2.83 3.22 3.31 1.69 2.22 2.13 1.37 0.88 1.51 0.42 1.69 -3.23 -0.39 -3.04 -3.04 -3.04 -1.28 -1.45 -0.05 0.43 -1.47 -1.44 -1.37 0.94 1.24 -0.12 1.46 1.19 0.84 1.6 0.47 -0.3 -0.01 0.48 0.19 0.19 0.75 0.53 0.2 0.07 0.85 1.62 1.35 1.2 1.33 1.35 1.68 0.98 1.12 0.1 0.82 0.14 2.66 1.73 1.08 1.41 -1.36 0.77 -0.12 0.51 2.54 -3.04 -3.04 -3.04 -3.04 -3.04 0.56 -0.12 1.79 1.73 1.46 -0.05 -0.27 -2.77 -3.04 -3.04 -3.04 -3.04 -3.04 -1.56 -3.04 -3.04 -1.2 -1.2 -2.58 -2.47 -1.67 At4g35250 253197_at
low similarity to vestitone reductase (Medicago sativa subsp. sativa) 2

lysine biosynthesis I | colanic acid building blocks biosynthesis | galactose degradation I | UDP-glucose conversion | lactose degradation IV




5.86 6.55
At1g62750 0.876
elongation factor Tu family protein -1.48 -2.24 -1.89 -1.8 -1.83 -1.76 -1.7 -1.59 -1.56 -1.8 -1.6 -1.77 -2.42 -2.09 -1.81 -1.24 -1.3 -1.4 -1.57 -1.57 -2.41 -2.02 0.25 2.46 2.34 -2.09 -2.41 -2.41 -2.27 -2.56 -2.5 2.25 0.87 2.45 1.82 0.93 1.42 1.17 1.4 1.55 1.89 1.86 1.58 1.22 1.43 1.8 1.97 1.98 1.02 1.88 2.11 2.06 0.02 -0.04 1.9 0.44 0.67 0.69 0.09 0.26 0.13 -0.36 -1.66 -1.84 2.12 1.9 1.99 1.99 2.25 2.41 2.35 2.46 2.39 2.02 2.11 2.15 2.45 2.11 2.21 2.19 2.37 2.76 2.8 1.38 2.06 1.9 0.95 1.58 1.34 1.08 1.77 -3.52 -0.57 -2.17 -2.94 -3.5 -0.72 -2.04 0.28 0.8 -2.76 -2.21 -2.11 0.88 0.25 -0.09 1.12 0.09 0.08 1.6 0.84 -0.26 -0.3 0.01 -0.22 -0.57 0.16 -0.39 -0.65 -0.57 0.35 0.73 0.87 0.39 0.46 0.47 1.04 0.6 0.88 0.54 0.54 0.79 1.65 0.95 -0.07 0.03 -1.95 -1.05 -0.16 0.49 1.96 -2.31 -2.49 -3.39 -3.39 -3.39 1.01 0.47 0.9 0.9 0.54 -1.18 -1.64 -2.77 -2.76 -3.14 -2.41 -2.54 -0.67 0.91 -2.58 -1.91 -0.49 -0.49 0.39 0.06 0.33 At1g62750 262645_at
elongation factor Tu family protein 2


Translation factors



5.13 6.32
At4g09650 0.876
similar to ATP synthase delta chain, chloroplast precursor (Nicotiana tabacum) -3.12 -3.56 -2.8 -2.71 -2.49 -2.74 -2.85 -2.45 -2.86 -2.65 -1.37 -3.13 -3.2 -2.68 -2.5 -2.52 -2.27 -2.78 -3.25 -3.45 -4.34 -3.18 -1.85 2.73 2.27 -3.09 -3.46 -4.08 -3.5 -3.82 -3.92 2.31 0.7 2.68 2.87 1.89 2.16 2.15 1.91 2 2.04 2.13 2.4 2.29 2.13 2 2.02 2.19 2 1.72 2.48 2.91 0.41 0.52 2.95 1.67 0.86 0.64 0.95 1.51 0.09 0.65 -2.74 -2.04 2.85 2.27 2.47 2.52 2.73 2.68 2.8 2.89 3.15 3.01 2.64 2.37 3.17 2.94 2.78 2.59 2.77 3.19 3.23 2.52 3.1 2.96 1.56 1.8 1.99 -1.02 1.69 -3.46 0.36 1.34 -2.65 -3.47 -1.17 -2.18 0.03 1.35 -2.48 -2.42 -2.04 2.24 1.48 0.07 1.8 1.18 0.1 1.83 0.73 -0.26 -0.06 0.38 -0.16 -0.4 0.62 0.04 -0.32 -0.4 0.71 1.28 1.12 0.61 1.12 1.22 2.18 0.89 1.12 1.19 0.93 1.03 2.02 0.03 0.76 0.46 -1.21 -0.16 -0.18 0.83 2.64 -2.42 -2.25 -2.76 -2.72 -2.58 0.86 -0.04 1.8 1.22 0.89 0.07 -0.89 -2.45 -3.66 -3.46 -3.84 -4.09 -3 -1.11 -4.01 -2.88 -1.64 -1.64 -2.87 -2.81 -0.87 At4g09650 255046_at
similar to ATP synthase delta chain, chloroplast precursor (Nicotiana tabacum) 4
transport facilitation | transport ATPases | biogenesis of chloroplast
ATP synthesis Photosystems | additional photosystem II components | ATP synthase components


6.48 7.58
At5g09660 0.875
encodes a microbody NAD-dependent malate dehydrogenase -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 -1.07 -3.41 2.79 2.91 -3.41 -3.41 -3.41 -3.41 -3.41 -3.41 2.75 1.97 2.83 2.75 1.05 2.29 2.38 2.19 2.39 2.56 2.47 2.64 2.42 2.34 2.66 2.65 2.61 2.27 2.11 2.43 3.02 -0.43 2.24 3.33 2.54 1 1 2.24 2.73 0.57 0.2 -3.41 -3.41 3.12 2.85 2.9 2.97 3.16 3 3.24 3.31 3.3 3.05 3.14 2.64 3.05 2.56 2.93 3.13 3.13 3.39 3.45 2.43 3.25 3.29 2.38 2.69 2.72 1.54 3.19 -3.41 1.12 -0.88 -3.41 -3.41 -1.06 -3.41 1.1 1.84 -3.41 -3.41 -3.41 1.83 2.15 2 1.56 1.55 2.02 1.38 -0.12 -0.79 -1.35 -1.05 -1.73 -2.34 0.18 -1.4 -1.99 -1.7 0.79 1.74 1.48 1.33 1.5 1.15 1.47 1.4 1.67 0.76 1.07 0.54 2.85 2.29 -0.89 0.39 -2.5 -0.46 -0.15 0.72 2.65 -3.41 -3.41 -3.41 -3.41 -3.41 2.42 1.6 1.58 2.25 2.16 -2.12 -2.5 -3.41 -3.41 -3.41 -3.41 -3.41 -2.46 -1.29 -3.41 -3.41 -0.8 -0.8 -2 -2.25 -1.27 At5g09660 250498_at
encodes a microbody NAD-dependent malate dehydrogenase 6
C-compound and carbohydrate metabolism | tricarboxylic-acid pathway (citrate cycle, Krebs cycle, TCA cycle) | biogenesis of chloroplast gluconeogenesis | aspartate degradation II | phenylalanine degradation I | serine-isocitrate lyase pathway | formaldehyde assimilation I (serine pathway) | mixed acid fermentation | acetyl-CoA assimilation | glyoxylate cycle | TCA cycle variation VII | TCA cycle variation VIII | TCA cycle variation II | TCA cycle variation IV | TCA cycle -- aerobic respiration Citrate cycle (TCA cycle) | Pyruvate metabolism | Glyoxylate and dicarboxylate metabolism | Carbon fixation | Reductive carboxylate cycle (CO2 fixation) Intermediary Carbon Metabolism | Gluconeogenesis from lipids in seeds


6.59 6.87
At2g35410 0.873
similar to 33 kDa ribonucleoprotein, chloroplast precursor (Nicotiana sylvestris) -2.14 -2 -2.33 -1.97 -1.85 -1.99 -1.8 -2.13 -1.98 -2 -1.68 -2.29 -0.86 -0.86 -2.4 -2.39 -2.25 -2.36 -2.27 -2.22 -2.22 -1.34 -1.9 1.28 1.17 -2.25 -2.36 -2.21 -2.33 -1.77 -2.2 0.96 0.19 0.92 1.31 0.99 0.66 0.61 1.15 1.05 0.95 0.97 0.65 0.62 1.15 1.31 1.12 1.22 0.61 1.04 0.6 1.76 -0.25 0.23 1.69 0.89 0.77 0.89 0.47 0.79 0.59 0.75 -0.57 -1.33 1.82 1.56 1.78 1.76 1.76 1.71 1.59 1.33 1.58 1.63 1.83 1.81 1.96 2.06 2.2 2.17 2.14 1.93 1.9 1.62 2.02 1.85 0.57 1.73 1.33 -0.37 1.06 -2.16 -0.09 -0.44 -1.53 -1.92 -0.57 -1.96 0.86 1.64 -2.02 -1.7 -1.89 1.08 0.42 0.57 0.99 0.16 0.22 1.42 0.64 -0.05 -0.1 0.18 0.24 -0.12 -0.3 -0.28 -0.41 -0.53 0.4 0.74 0.51 0.3 0.32 0.27 1.3 0.48 0.4 0.79 0.49 -0.19 1.3 0.19 -0.09 -0.31 -1.68 -0.61 -0.26 0.47 1.78 -1.2 -1.21 -0.86 -0.86 -0.86 0.39 -0.28 1.08 -0.05 -0.08 -1.15 -1.03 -0.95 -0.71 -0.46 -0.27 -0.4 -0.89 -0.39 -0.31 -0.77 -0.71 -0.71 0.11 -0.03 0.44 At2g35410 266642_at
similar to 33 kDa ribonucleoprotein, chloroplast precursor (Nicotiana sylvestris) 4



mRNA processing in chloroplast


4.11 4.60
At5g04140 0.873 GLU1 encodes a gene whose sequence is similar to ferredoxin dependent glutamate synthase (Fd-GOGAT). Expression in leaves is induced by light and sucrose. Proposed to be involved in photorespiration and nitrogen assimilation. -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 2.98 3.2 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 3.16 2.14 2.95 3.21 1.87 2.47 2.1 2.31 2.31 2.98 2.96 2.67 2.25 1.97 2.8 3.11 3.1 1.84 2.15 2.69 3.38 0.74 0.06 3.59 2 1.9 2.16 1.49 2.34 2.42 1.79 -0.88 -1.98 3.14 3.23 3.14 3.2 3.46 3.54 3.55 3.66 3.55 3.08 3.41 3.27 3.52 2.95 2.99 3.49 3.69 3.87 3.84 2.89 3.63 3.56 2.24 1.5 1.29 1.3 3.3 -3.71 0.56 -2.17 -3.71 -3.71 -3.71 -3.71 0.42 0.94 -3.71 -3.71 -3.71 2.91 2.22 1.68 1.65 2.06 1.3 1.85 0.64 -0.03 -0.14 0.15 -0.43 -0.26 0.91 0.37 -0.11 0.01 0.99 1.98 1.68 1.6 1.54 1.7 2.02 1.48 1.7 1.57 1.2 1.47 3.22 2.69 -0.19 0.19 -3.27 -1.8 -0.07 1.01 2.82 -3.71 -3.71 -3.71 -3.71 -3.71 2.71 2.21 1.56 2.02 1.75 -2.12 -2.5 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -3.71 -2.04 -2.04 -3.71 -3.71 -3.71 At5g04140 245701_at GLU1 encodes a gene whose sequence is similar to ferredoxin dependent glutamate synthase (Fd-GOGAT). Expression in leaves is induced by light and sucrose. Proposed to be involved in photorespiration and nitrogen assimilation. 4 photorespiration amino acid metabolism | assimilation of ammonia, metabolism of the glutamate group | nitrogen and sulfur utilization
Nitrogen metabolism



7.25 7.58
At2g47450 0.872 CAO A component of the chloroplast signal recognition particle pathway that is involved in LHCP targeting. Fullname CHAOS is an abbreviation of chlorophyll a/b binding protein harvesting-organelle specific. -2.91 -2.91 -2.91 -2.91 -2.91 -2.91 -2.91 -2.91 -2.91 -2.91 -0.2 -2.91 -2.91 -2.91 -2.91 -2.91 -2.91 -2.91 -2.91 -2.91 -2.91 -1.13 -2.91 2.34 2.83 -2.91 -2.91 -2.91 -2.91 -2.91 -2.91 2.33 0.64 2.98 1.85 1.82 2.22 1.74 1.65 1.18 1.87 1.85 2.47 1.77 1.23 1.29 1.61 1.82 1.83 1.89 2.25 2.38 0.74 1.2 3.26 2.35 -0.16 -0.14 0.62 1.41 0.22 -0.11 -2.91 -0.44 1.95 1.96 1.75 2.33 2.84 3.21 2.56 2.5 2.92 2.21 1.64 2.46 2.25 1.65 1.34 1.51 2.41 2.75 2.89 2.22 2.41 2.57 1.81 0.12 -0.85 1.07 2.57 -2.91 -0.67 -0.4 -1.54 -2.91 -1 -2.91 0.11 1.08 -2.91 -2.91 -2.91 -0.35 2.39 -0.26 0.94 1.65 -0.15 2.23 1.64 0.93 1.73 1.78 1.73 1.38 1.56 1.47 1.42 1.35 1.22 1.54 1 0.84 0.8 0.32 1.07 1 0.88 -0.9 1.47 0.8 1.63 0.11 0.13 0.28 -2.06 -0.1 0.15 1.17 2.52 -2.91 -2.91 -2.91 -2.91 -2.91 0.8 0.42 1.68 1.17 0.98 0.28 -1.18 -2.91 -2.91 -2.91 -2.91 -2.91 -1.77 -0.94 -2.91 -2.91 -0.6 -0.6 -2.91 -2.91 -0.1 At2g47450 245123_at CAO A component of the chloroplast signal recognition particle pathway that is involved in LHCP targeting. Fullname CHAOS is an abbreviation of chlorophyll a/b binding protein harvesting-organelle specific. 10 chloroplast thylakoid membrane protein import


Pathway for nuclear-encoded, thylakoid-localized proteins | SRP (signal recognition particle)-dependent pathway for integral membrane proteins


5.48 6.17
At4g14890 0.871
ferredoxin family protein -3.29 -3.29 -2.36 -3.29 -3.29 -1.81 -1.52 -3.29 -3.29 -2.35 0.1 -1.15 -2.13 -2.37 -2.84 -2.48 -1.61 -1.9 -3.29 -3.29 -3.29 -2.41 -1.68 1.86 1.6 -2.44 -1.88 -2.4 -2.49 -3.29 -2.68 2.19 0.91 1.79 1.95 1.01 1.45 1.41 1.92 1.61 1.68 1.67 1.69 1.45 1.89 1.7 1.93 1.72 1.39 1.78 2 1.8 -0.28 1.26 1.74 1.22 0.72 0.75 0.7 1.01 -0.07 0.49 -3.88 -2.25 2.2 1.99 1.87 2.08 2.35 2.17 2.04 1.93 2 2.06 2.29 2.1 2.34 2.48 2.37 2.29 2.42 2.54 2.4 1.44 2.06 1.88 1.59 2.04 1.89 -0.7 1.17 -3.03 -1.92 -1.67 -1.71 -2.5 -0.68 -1.95 0.85 1.56 -2.1 -2.42 -1.84 0.6 0.48 0.12 1.31 0.06 0.03 1.65 0.87 0.21 0.16 0.31 0.17 -0.09 0.2 0.11 -0.14 -0.09 0.91 0.99 0.76 0.2 0.35 0.46 1.25 1.05 0.99 0.43 0.82 0.89 0.99 -0.75 0 -1.5 -2.08 -1.34 0.31 0.88 1.57 -2.79 -2.38 -3.29 -3.29 -3.29 1.13 0.63 1.8 0.73 0.55 0.22 -0.59 -1.07 -0.85 -0.78 -1.2 -0.59 -0.39 1.1 -0.74 -1.46 -0.73 -0.73 -0.2 0 0.65 At4g14890 245347_at
ferredoxin family protein 2
transported compounds (substrates) | electron / hydrogen transport | transport facilitation
Photosynthesis Photosystems | Ferredoxin


5.55 6.43
At1g09340 0.870
expressed protein -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 3.34 3.21 -3.82 -3.82 -3.82 -3.82 -3.82 -3.82 2.77 1.74 3.21 2.74 1.77 2.56 2.21 1.98 2.59 2.9 2.75 2.52 2.15 2.25 2.72 3 2.93 2.22 2.66 2.87 3.39 0.52 0.48 3.3 1.13 1.08 0.85 0.97 1.66 0.4 0.02 -3.82 -3.82 3.25 3.01 3 3.16 3.38 3.41 3.43 3.44 3.46 3.21 3.07 3.08 3.46 3.16 3.35 3.5 3.63 3.71 3.77 3.05 3.53 3.29 2.22 2.17 1.72 0.05 2.73 -3.82 1.04 2.06 -3.82 -3.82 -3.82 -3.82 0.57 1.66 -3.82 -3.82 -3.82 2.9 1.73 0.98 2.34 1.79 1.35 2.52 0.93 0.16 -0.22 0.14 -0.62 -0.71 0.89 -0.4 -0.71 -0.38 1.61 2.19 2.2 1.45 1.85 1.35 2.61 1.48 1.81 1.59 1.71 1.29 2.97 1.4 0.88 -0.32 -1.61 -0.86 0.74 1.73 3.45 -3.82 -2.6 -3.82 -3.82 -3.82 2.25 1.13 2.61 2.15 1.68 -1.29 -1.7 -3.7 -3.82 -3.82 -3.53 -3.82 -3.82 -2.56 -3.82 -3.92 -0.86 -0.86 -2.17 -2.41 -1.39 At1g09340 263676_at
expressed protein 1

colanic acid building blocks biosynthesis | dTDP-rhamnose biosynthesis | galactose degradation I | UDP-glucose conversion | lactose degradation IV




7.26 7.69
At1g08520 0.869
Similar to Mg-chelatase from Nicotiana tabacum and from Pisum sativum -1.83 -1.87 -1.75 -1.87 -1.82 -1.73 -1.87 -1.41 -1.8 -1.83 -0.43 -2.1 -2.37 -1.33 -2.04 -1.81 -1.81 -1.86 -1.33 -1.66 -1.55 -0.96 -1.72 1.22 1.39 -1.8 -1.62 -1.84 -1.71 -1.75 -1.86 1 -0.2 1.18 1.17 0.99 0.79 0.86 1.06 0.46 0.8 0.82 1.01 1.08 1.09 0.86 0.8 0.97 0.73 0.36 0.25 1.38 0.5 -0.53 1.94 1.3 -0.12 -0.01 0.79 1.28 0.17 -0.05 -0.52 -0.76 1.2 1.17 1.09 1.01 1.28 1.3 1.22 1.21 1.45 1.21 1.1 1.82 2.11 2.2 1.9 1.91 1.98 1.74 1.69 1.55 1.58 1.42 0.69 0.68 0.75 -0.14 0.78 -1.57 -0.49 -1.87 -1.87 -1.7 -0.52 -1.73 0.68 1.31 -2.47 -2.33 -1.64 0.7 0.48 0.05 1.08 0.51 -0.31 1.75 1.19 0.56 0.91 1.03 0.79 0.6 0.96 0.61 0.55 0.49 0.62 0.71 0.36 0.16 0.49 0.42 0.97 0.62 0.55 0.31 0.57 0.39 1.02 -0.32 0.83 0.75 -1.21 -0.39 -0.05 0.43 1.6 -1.13 -1.12 -1.87 -1.95 -1.87 0.45 0.56 0.57 0.14 0.23 0.25 -0.25 -1.19 -1.32 -1.93 -1.23 -1.04 -1.28 0.32 -1.45 -1.71 -0.02 -0.02 -0.42 -0.63 0.69 At1g08520 261695_at
Similar to Mg-chelatase from Nicotiana tabacum and from Pisum sativum 10 chlorophyll biosynthesis
chlorophyll biosynthesis Porphyrin and chlorophyll metabolism Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Chlorophyll biosynthesis and breakdown
chlorophyll and phytochromobilin metabolism | chlorophyll biosynthesis
3.59 4.67
At4g32260 0.866
ATP synthase family -2.02 -2.21 -1.55 -1.93 -1.81 -1.8 -1.95 -1.99 -2.34 -1.95 -0.63 -1.12 -1.82 -1.9 -2.06 -1.85 -2.09 -2.33 -2.41 -1.47 -2.2 -2.44 -1.75 1.81 1.76 -2.49 -2.68 -3.09 -3 -2.79 -3 1.37 0.79 1.73 1.79 1.02 1.31 1.61 1.4 1.56 1.61 1.41 1.66 1.61 1.47 1.42 1.71 1.64 1.39 1.37 1.49 1.96 -0.05 0.77 2.15 1.5 1.07 1.11 1.29 1.81 0.85 0.87 -1.84 -1.1 1.88 1.61 1.59 1.83 1.92 2 1.94 1.9 1.92 1.85 1.84 1.76 1.93 1.75 1.89 1.93 2.06 1.99 2.02 1.52 2.06 1.96 1.53 1.3 1.12 0.14 1.72 -3.25 0 0.94 -2.12 -2.94 -0.49 -2.23 0.14 0.94 -3.12 -2.66 -2.29 1.95 1.19 1.04 1.08 0.67 0.81 0.9 -0.03 -0.57 -0.37 -0.01 -0.6 -0.43 0.25 -0.34 -0.36 -0.39 0.15 0.75 0.64 0.32 0.91 0.84 1.36 0.67 0.75 0.94 0.46 0.04 1.63 1.02 0.05 -0.01 -1.72 -0.55 -0.32 0.28 1.6 -2.82 -2.57 -2.77 -2.92 -3.43 1.25 0.55 0.85 1.01 0.94 0.19 0.07 -1.27 -1.35 -1.7 -0.82 -1.12 -1.02 -1.77 -1.32 -1.39 -0.73 -0.73 -1.83 -1.99 -0.45 At4g32260 253420_at
ATP synthase family 6
photosynthesis

Photosystems | additional photosystem II components | ATP synthase components


4.75 5.58
At3g54050 0.865
strong similarity to fructose-1,6-bisphosphatase (Brassica napus) -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -0.12 -1.91 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 -1.63 -1.81 -3.7 -1.77 3.04 2.65 -3.7 -3.7 -3.7 -3.7 -3.7 -3.7 2.18 1.74 2.5 2.74 1.48 2.25 2.45 2.25 2.58 2.42 2.31 2.58 2.47 2.49 2.6 2.64 2.54 2.45 1.67 2.17 3.08 0.05 0.39 3.28 1.95 1.42 1.25 1.69 2.09 0.84 0.6 -3.7 -2.92 3.31 2.87 3.03 3.14 3.24 3.16 3.17 3.2 3.34 3.2 3.25 2.98 3.43 3.42 3.49 3.24 3.38 3.32 3.33 2.47 3.19 3.05 1.05 2.37 2.12 1.22 2.63 -3.7 1.35 -0.68 -3.7 -3.7 -0.46 -3.7 0.95 1.73 -3.7 -3.7 -3.7 2.37 1.7 1.08 1.87 1.48 1.15 1.92 0.43 -0.84 -0.85 -0.35 -1.19 -1.73 -0.25 -1.86 -2.87 -2.74 0.96 1.74 1.59 1.17 1.3 1.08 2.02 0.96 1 1.12 1.34 -0.3 2.8 1.19 0.75 0.48 -1.73 -0.24 0.04 1.38 3.01 -3.7 -3.7 -3.7 -3.7 -3.7 1.52 0.63 2.21 1.8 1.49 -0.18 -0.75 -3.7 -3.7 -3.7 -0.2 -0.47 -3.7 -3.7 -0.53 -1.68 -0.92 -0.92 -3.7 -3.7 -1.54 At3g54050 251885_at
strong similarity to fructose-1,6-bisphosphatase (Brassica napus) 10
C-compound and carbohydrate metabolism | glycolysis and gluconeogenesis | photosynthesis | biogenesis of chloroplast gluconeogenesis | Calvin cycle Glycolysis / Gluconeogenesis | Pentose phosphate pathway | Fructose and mannose metabolism | Carbon fixation Intermediary Carbon Metabolism


6.97 7.19
At5g19220 0.865 ADG2 Biochemical studies of adg2-1 mutant indicate that mutant plants do not accumulate ADP glucose pyrophosphorylase (ADGase)large subunit protein and that ADGase small subunits assemble as homotetramers. ADG2 gene may encode the large subunit of ADGase. | Encodes the large subunit of ADP-glucose pyrophosphorylase which catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms (ApL1-4) ha -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 2.64 2.87 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 2.02 1.7 2.5 2.37 1.38 2.19 2.27 2.12 1.8 2.18 2.33 2.42 2.4 2.06 2.04 2.25 2.44 2.16 1.11 0.97 2.89 0.62 0.66 2.99 2.4 1.59 1.51 2.04 2.54 0.84 0.65 -3.07 -3.07 2.65 2.67 2.62 2.5 2.6 2.65 2.7 2.95 3.17 2.97 2.81 2.48 3.32 3.2 2.95 2.73 2.97 3.5 3.51 2.02 2.77 2.7 1.33 1.79 2.08 -0.33 2.22 -3.06 0.78 -1.51 -3.07 -3.07 -3.07 -1.79 1.08 1.96 -2.25 -3.07 -1.56 1.46 1.24 1.02 1.77 0.83 -0.65 1.96 0.87 -0.03 0.48 0.36 -0.07 -0.31 0.98 -0.08 -0.41 -0.33 1.39 1.79 1.26 0.89 1.37 0.84 1.77 1.34 1.38 0.9 1.58 0.8 2.24 0.9 0.44 -1.34 -2.4 -2.68 0.46 1.07 2.46 -3.07 -3.07 -3.07 -3.07 -3.07 1.94 0.99 2.04 1.52 1.34 0.68 0.74 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -3.07 -1.6 -1.6 -3.07 -3.07 -3.07 At5g19220 249927_at ADG2 Biochemical studies of adg2-1 mutant indicate that mutant plants do not accumulate ADP glucose pyrophosphorylase (ADGase)large subunit protein and that ADGase small subunits assemble as homotetramers. ADG2 gene may encode the large subunit of ADGase. | Encodes the large subunit of ADP-glucose pyrophosphorylase which catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms (ApL1-4) ha 10
C-compound, carbohydrate anabolism starch biosynthesis | sucrose biosynthesis | trehalose biosynthesis III | colanic acid building blocks biosynthesis | dTDP-rhamnose biosynthesis | peptidoglycan biosynthesis | UDP-N-acetylglucosamine biosynthesis | galactose degradation I | glucose and glucose-1-phosphate degradation | UDP-glucose conversion | lactose degradation IV | sucrose degradation III Starch and sucrose metabolism Cell Wall Carbohydrate Metabolism | starch metabolism


6.02 6.58
At4g04640 0.862 ATPC1 One of two genes (with ATPC2) encoding the gamma subunit of Arabidopsis chloroplast ATP synthase. -3.35 -4.07 -2.71 -4.07 -2.24 -2.42 -2.37 -2.24 -4.07 -2.69 -0.85 -1.42 -1.94 -1.55 -2.31 -2.35 -4.07 -3.02 -4.07 -2.57 -4.07 -1.86 -1.23 2 1.9 -3.59 -4.07 -4.07 -4.07 -4.07 -4.07 1.65 1.34 1.89 2.15 1.53 1.68 2.02 1.85 1.94 1.91 1.87 2.18 1.99 1.9 1.94 1.94 2.2 1.82 1.51 1.83 2.47 0.78 0.9 2.52 1.94 1.54 1.58 1.77 2.18 1.24 1.35 -1.98 -1.05 2.38 1.9 1.94 2.08 2.27 2.27 2.19 2.14 2.29 2.36 2.25 2.31 2.54 2.54 2.52 2.58 2.47 2.43 2.48 2.29 2.71 2.66 1.92 2.16 2.08 1 2.27 -3.85 1.27 1.53 -2.65 -4.07 -0.55 -2.94 0.85 1.68 -2.84 -2.43 -2.68 1.97 1.73 1.21 1.44 1.46 1.08 1.54 0.87 0.28 0.52 0.77 0.3 0.21 0.85 0.36 0.07 0.02 0.98 1.5 1.39 1.22 0.93 0.97 1.49 0.77 1.11 1.24 1 0.96 2.06 1.33 1.13 1.11 -0.51 1.03 0.62 1.31 2.15 -4.07 -3.32 -4.07 -4.07 -4.07 1.71 0.93 1.59 1.72 1.59 0.6 -0.18 -2.35 -4.07 -4.07 -4.07 -4.07 -3.31 -1.46 -4.07 -4.07 -1.12 -1.12 -4.07 -4.07 -0.13 At4g04640 255290_at ATPC1 One of two genes (with ATPC2) encoding the gamma subunit of Arabidopsis chloroplast ATP synthase. 10 chloroplast ATP synthase complex | ATP synthesis coupled proton transport | enzyme regulator activity transport facilitation | transport ATPases | biogenesis of chloroplast
ATP synthesis Photosystems | additional photosystem II components | ATP synthase components


6.54 6.78
At1g08540 0.859 SIGB Subunit of chloroplast RNA polymerase, confers the ability to recognise promoter sequences on the core enzyme -1.56 -1.13 -1.56 -1.56 -1.56 -1.56 -1.56 -1.56 -1.56 -1.56 -0.53 -1.56 -1.56 -1.56 -1.56 -1.56 -1.56 -1.56 -1.56 -1.56 -1.56 -1.56 -1.17 1.81 1.97 -1.56 -1.56 -1.56 -1.56 -1.56 -1.56 0.94 0.39 1.87 1.02 1.05 0.89 0.78 1.5 1.39 1.45 1.41 1.08 0.93 1.52 1.49 1.28 1.48 0.67 0.99 1.03 1.83 -0.08 -0.99 1.63 0.73 0.73 0.28 -0.16 0.38 -0.09 -0.92 -1.56 -1.56 2.02 1.73 1.56 1.63 1.77 1.5 1.2 1.68 2.04 1.8 1.73 1.31 2.25 2.19 2.16 2.04 2.11 2.15 1.98 1.54 2.14 1.86 -1.56 0.38 -0.53 0.52 1.56 -1.56 -1.56 -1.56 -1.56 -1.56 -1.56 -1.56 -0.78 0.14 -1.56 -1.56 -1.56 0.66 0.6 -1.56 0.18 0.36 -1.38 1.87 1.15 0.64 0.57 0.55 0.71 0.21 0.01 -0.27 -0.5 -0.3 0.96 1.17 0.89 0.63 0.35 -0.19 1.18 0.02 0.46 0.27 0.81 -0.12 1.56 0.63 0.81 0.54 -1.01 -0.01 0.71 1.11 2.1 -1.56 -1.56 -1.56 -1.56 -1.56 -0.15 -0.53 1.22 0.52 0.18 -0.89 -1.56 -1.56 -1.56 -1.56 -1.35 -1.48 -1.56 0 -1.38 -1.56 -0.65 -0.65 -1.13 -1.56 0.39 At1g08540 264781_at SIGB Subunit of chloroplast RNA polymerase, confers the ability to recognise promoter sequences on the core enzyme 10 transcription initiation


Transcription (chloroplast)


3.60 3.82
At1g32060 0.859
phosphoribulokinase (PRK) / phosphopentokinase (PRKASE) -4.88 -4.88 -4.88 -4.88 -4.88 -4.88 -4.88 -4.88 -4.34 -4.88 -1.85 -3.4 -4.88 -4.88 -4.88 -4.88 -4.88 -4.88 -4.88 -4.88 -4.88 -3.7 -2.86 2.94 2.94 -4.88 -4.88 -4.88 -4.88 -4.88 -4.88 2.85 2 3.07 3.19 1.99 2.27 2.48 2.45 2.59 2.64 2.5 2.87 2.66 2.35 2.69 2.78 2.84 2.24 2.39 2.71 3.27 0.79 1.22 3.39 2.66 1.51 1.38 2.14 2.68 1.52 1.12 -3.65 -2.58 3.3 2.94 2.93 3.15 3.39 3.49 3.34 3.39 3.36 3.26 3.22 3.15 3.35 3.08 3.32 3.46 3.51 3.46 3.53 2.81 3.35 3.36 2.21 2.8 2.54 1.18 2.99 -4.63 0.18 -1.59 -2.79 -4.26 0.47 -3.46 1.46 2.25 -4.88 -4.55 -3.8 2.88 2.17 1.91 2.29 1.76 1.7 2.16 0.87 0.05 0.17 0.4 0 -0.11 0.84 0.18 -0.27 -0.11 1.35 2 1.98 1.53 1.9 1.7 2.31 1.86 2.09 1.87 1.47 0.99 2.91 1.5 1.22 0.39 -1.43 -0.22 0.64 1.69 2.82 -2.58 -2.58 -2.48 -3.68 -2.35 2.6 2 2.25 2.27 2.22 1.74 1.44 -1.27 -2.62 -3.38 -4.88 -4.88 -2.94 -4.63 -5.01 -4.88 0.72 0.72 -4.88 -4.88 -3.14 At1g32060 255720_at
phosphoribulokinase (PRK) / phosphopentokinase (PRKASE) 10
C-compound and carbohydrate metabolism | glycolysis and gluconeogenesis | photosynthesis Calvin cycle Carbon fixation Intermediary Carbon Metabolism


8.25 8.53
At2g45770 0.855 CPFTSY signal recognition particle receptor protein, chloroplast (FTSY), similar to Cell division protein ftsY homolog (Aquifex aeolicus) -0.64 -1.75 -1.24 -1.24 -0.86 -0.85 -1.26 -1.34 -1.12 -0.47 -1.6 -1.24 -1.24 -1.24 -1.15 -1.24 -1.24 -0.52 -1.05 -0.75 -1.24 -0.34 -1.39 0.84 0.47 -1.29 -1.93 -1.24 -1.24 -1.24 -1.24 0.76 -0.23 0.16 1.02 0.69 0.12 0.43 0.63 0.53 0.79 0.64 0.67 0.54 0.68 0.61 0.54 0.83 0.04 0.05 0.04 0.83 -0.05 -0.68 1.28 0.67 0.16 0.28 0.04 0.21 0.54 0.25 0.11 -1.02 1.23 1.15 1.18 1.13 1.23 1.12 1.03 1.12 1.19 1.36 1.01 1.11 1.49 1.55 1.67 1.55 1.63 1.55 1.48 0.48 0.78 0.63 0.17 0.63 -0.13 0.21 0.65 -1.2 -0.28 -1.24 -1.24 -1.12 -0.09 -1.24 0.33 0.67 -0.9 -0.62 -1.29 0.67 0.27 0.23 0.79 0.02 0.53 1.65 1.09 0.46 0.05 0.3 0.18 0.12 0.17 -0.18 -0.14 0.06 0.73 0.46 0.26 0.33 0.03 0.06 0.75 0.24 0.26 0.84 0.81 0.37 0.63 0.38 0.26 -0.28 -1.36 -0.95 0.03 0.52 1.59 -0.8 -0.62 -1.24 -1.24 -1.24 -0.26 0.04 0.99 0.28 -0.03 -1.03 -0.85 -1.32 -1.12 -1.24 -0.08 -0.31 -1.15 0.22 -0.64 -0.8 -0.54 -0.54 0.37 0.31 0.32 At2g45770 266867_at CPFTSY signal recognition particle receptor protein, chloroplast (FTSY), similar to Cell division protein ftsY homolog (Aquifex aeolicus) 10


Folding, Sorting and Degradation | Protein export Pathway for nuclear-encoded, thylakoid-localized proteins | SRP (signal recognition particle)-dependent pathway for integral membrane proteins


2.72 3.59
At3g11950 0.855
UbiA prenyltransferase family protein -1.28 -1.79 -1.79 -1.79 -1.79 -1.03 -1.79 -0.97 -1.12 -0.9 -0.7 -1.04 -1.3 -1.1 -1.32 -1.27 -1.24 -0.56 -0.72 -1.07 -1.01 -1.79 -1.86 1.82 1.41 -1.01 -2.09 -1.42 -1.45 -1.73 -1.45 1.12 0.04 1.31 0.93 0.28 0.85 0.91 0.97 1.04 1.06 1.3 0.9 1.03 0.94 1.06 1.45 1.33 0.65 0.54 0.77 1.9 0 -0.81 1.85 0.49 0.54 0.42 0.12 0.81 0.33 0.23 -1 -1.19 1.74 1.49 1.66 1.5 1.57 1.4 1.64 1.66 1.72 1.49 1.26 1.53 1.73 1.55 1.66 1.8 1.85 2.02 2.02 1.63 2.12 2 0.11 0.79 0.97 -0.06 1.24 -0.35 0.45 0.28 -0.32 -0.61 -0.96 -0.64 -0.3 0.42 -1.23 -1.29 -0.64 -0.03 -0.03 0.22 0.67 0.23 -0.34 1.12 0.28 -0.06 0.23 0.25 0.15 0.13 0.53 0.18 0.17 0.16 0.43 0.62 0.54 0.19 0.12 0.17 0.88 -0.02 0.24 -0.4 0.25 -0.47 1.6 0.89 0.07 -1.03 -1.63 -1.26 -0.02 0.16 1.68 -1.13 -1.79 -1.79 -1.79 -1.79 0.11 0.08 0.9 0.43 0.28 -0.36 -0.48 -1.79 -1.79 -1.79 -2.27 -1.84 -1.74 -0.89 -2.25 -2.61 -0.91 -0.91 -1.12 -1.38 -0.21 At3g11950 258755_at
UbiA prenyltransferase family protein 2

polyisoprenoid biosynthesis | biosynthesis of proto- and siroheme | mevalonate pathway
Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Plastoquinone biosynthesis
plastochinone and phylloquinone biosynthesis | plastochinone biosynthesis
3.58 4.73
At5g17230 0.855 PSY phytoene synthase (PSY) / geranylgeranyl-diphosphate geranylgeranyl transferase -2.69 -2.69 -2.54 -2.69 -2.69 -2.69 -2.69 -2.69 -2.69 -2.69 -1.27 -1.53 -1.67 -1.47 -2.36 -1.96 -3.01 -2.69 -2.69 -2.82 -2.69 -1.5 -0.76 1.33 1.24 -2.17 -2.48 -1.32 -1.77 -0.73 -1.81 1.88 0.72 2.06 1.25 0.57 1.38 1.09 1.12 1.4 1.69 1.78 1.56 1.12 1.32 1.56 1.66 1.74 1.48 0.31 1.23 1.95 -0.06 -0.14 2.1 0.44 0.25 0.02 -0.11 0.14 1.12 0.38 0.27 -0.91 1.85 1.81 1.58 1.86 2.37 2.43 2.4 2.41 2.12 1.41 1.77 1.97 1.88 1.08 1.61 1.63 2.23 2.33 2.25 1.12 1.91 1.9 0.66 1.24 1.2 0.85 2.04 -2.54 -0.09 -1.45 -2 -2.06 -0.83 -1.52 0.5 0.61 -1.86 -1.75 -1.49 0.7 1.61 1.05 1.1 1.2 0.92 1.01 0.04 -0.38 -0.36 -0.19 -0.32 -0.31 0.23 0 -0.18 -0.21 0.53 1 1.07 1.92 0.61 1.2 1.17 0.69 1.04 0.44 0.31 0.37 1.46 1.52 1.42 1.97 1.72 2.54 0.56 1.32 2.06 -2.67 -2.8 -2.69 -2.25 -2.69 1.05 0.56 1.3 0.57 0.03 -0.64 -1.03 -1.62 -1.2 -1.55 -3.58 -3.01 -0.81 -0.47 -3.13 -3.27 -1.49 -1.49 -1.23 -1.05 -0.56 At5g17230 250095_at PSY phytoene synthase (PSY) / geranylgeranyl-diphosphate geranylgeranyl transferase 8 carotenoid biosynthesis
carotenoid biosynthesis Glycan Biosynthesis and Metabolism | N-Glycan biosynthesis Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Carotenoid biosynthesis
Carotenoid and abscisic acid metabolism | carotenid biosynthesis
4.80 6.12
At3g27830 0.854 RPL12-A 50S ribosomal protein L12-1, chloroplast (CL12-A) -1.9 -2.21 -1.36 -1.89 -2.54 -2.52 -2.63 -2.09 -2.41 -2.02 -1.15 -1.86 -2.65 -1.27 -1.85 -1.32 -2 -1.59 -2.21 -3.38 -3.46 -2.99 -2.2 1.37 1.2 -1.51 -1.57 -1.34 -2.09 -1.5 -1.99 1.34 0.6 1.56 1.65 1.2 0.94 1.03 1.12 1.08 1.26 1.09 1.32 1.09 1.03 1.12 1.14 1.31 0.92 1.13 1.18 1.44 0.15 0.95 1.24 0.15 0.6 0.74 0.65 1.02 -0.31 0.18 -1.48 -1.37 1.65 1.31 1.35 1.48 1.55 1.55 1.6 1.57 1.61 1.58 1.51 1.85 1.95 1.95 1.94 2.11 2.02 1.72 1.74 1.62 1.81 1.68 1.14 1.52 1.42 -0.65 0.66 -2.17 0.28 0.76 -1.93 -2.42 -0.43 -1.88 1.07 1.88 -3.16 -2.35 -1.72 1.65 0.23 0.1 1.02 0.26 -0.3 1.38 0.95 0.53 0.48 0.61 0.45 0.23 0.39 0.32 0.09 -0.03 0.64 0.83 0.67 0.17 0.33 0.4 1.07 0.69 0.88 1.21 0.53 0.69 1.03 -0.7 0.7 -0.09 -0.71 -0.46 0.47 0.74 1.31 -2.14 -2.04 -3.46 -3.46 -3.46 0.95 0.34 1.15 0.61 0.63 0.68 0.02 -1.11 -1.76 -1.81 -1.05 -1.22 0.09 0.24 -1.14 -1.09 0.24 0.24 -0.04 0.19 0.31 At3g27830 257225_s_at (m) RPL12-A 50S ribosomal protein L12-1, chloroplast (CL12-A) 6 protein biosynthesis

Ribosome



4.34 5.57
At3g27850 0.854 RPL12-C 50S ribosomal protein L12-3, chloroplast (CL12-C) -1.9 -2.21 -1.36 -1.89 -2.54 -2.52 -2.63 -2.09 -2.41 -2.02 -1.15 -1.86 -2.65 -1.27 -1.85 -1.32 -2 -1.59 -2.21 -3.38 -3.46 -2.99 -2.2 1.37 1.2 -1.51 -1.57 -1.34 -2.09 -1.5 -1.99 1.34 0.6 1.56 1.65 1.2 0.94 1.03 1.12 1.08 1.26 1.09 1.32 1.09 1.03 1.12 1.14 1.31 0.92 1.13 1.18 1.44 0.15 0.95 1.24 0.15 0.6 0.74 0.65 1.02 -0.31 0.18 -1.48 -1.37 1.65 1.31 1.35 1.48 1.55 1.55 1.6 1.57 1.61 1.58 1.51 1.85 1.95 1.95 1.94 2.11 2.02 1.72 1.74 1.62 1.81 1.68 1.14 1.52 1.42 -0.65 0.66 -2.17 0.28 0.76 -1.93 -2.42 -0.43 -1.88 1.07 1.88 -3.16 -2.35 -1.72 1.65 0.23 0.1 1.02 0.26 -0.3 1.38 0.95 0.53 0.48 0.61 0.45 0.23 0.39 0.32 0.09 -0.03 0.64 0.83 0.67 0.17 0.33 0.4 1.07 0.69 0.88 1.21 0.53 0.69 1.03 -0.7 0.7 -0.09 -0.71 -0.46 0.47 0.74 1.31 -2.14 -2.04 -3.46 -3.46 -3.46 0.95 0.34 1.15 0.61 0.63 0.68 0.02 -1.11 -1.76 -1.81 -1.05 -1.22 0.09 0.24 -1.14 -1.09 0.24 0.24 -0.04 0.19 0.31 At3g27850 257225_s_at (m) RPL12-C 50S ribosomal protein L12-3, chloroplast (CL12-C) 6 protein biosynthesis

Ribosome



4.34 5.57
At2g36990 0.853 SIGF RNA polymerase sigma subunit SigF (sigF) / sigma-like factor (SIG6) -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 -1.83 0.19 -1.83 -1.83 -1.83 -1.83 -1.84 -1.83 -1.39 -1.83 -1.83 -1.83 -1.32 -0.88 1.28 1.57 -1.23 -1.83 -1.83 -1.83 -1.83 -1.83 1.38 0.2 1.12 1.47 0.53 0.49 0.31 1.06 0.81 0.86 0.77 0.87 0.61 1.22 0.98 0.84 0.72 0.27 1.25 1.27 1.31 -0.09 -0.28 1.24 0.78 0.59 0.33 -0.42 0.39 -0.6 -0.55 -1.83 -1.74 1.59 1.96 1.5 1.51 1.81 1.83 1.46 1.6 1.62 1.4 1.77 1.75 2 1.94 1.81 2.02 2.17 1.86 1.84 1.17 1.54 1.29 0.68 1.11 0.9 -0.25 0.92 -2.09 0.02 -0.27 -1.83 -1.83 -0.78 -1.83 1.19 1.51 -1.83 -1.87 -1.83 -0.41 -0.08 -0.74 1.18 -0.14 0.21 1.48 0.93 0.84 0.78 0.85 0.67 0.87 0.69 0.75 0.73 0.94 0.95 1.11 0.61 0.07 0.69 0.64 1.23 0.93 0.67 0.28 0.92 0.91 0.84 -0.78 -0.02 -0.91 -1.62 -1.12 0.36 0.7 1.44 -1.14 -1.25 -1.83 -1.83 -1.83 0.96 0.31 1.08 0.55 0.26 -0.45 -1.11 -1.83 -1.83 -1.83 -1.74 -1.43 -0.67 1.24 -1.82 -1.79 -0.34 -0.34 0.45 0.44 0.66 At2g36990 263846_at SIGF RNA polymerase sigma subunit SigF (sigF) / sigma-like factor (SIG6) 6 transcription initiation


Transcription (chloroplast)


3.64 4.26
At3g55330 0.853
photosystem II reaction center PsbP family protein -3.31 -3.31 -3.31 -3.31 -3.31 -3.31 -3.31 -3.31 -3.31 -3.31 -0.45 -1.93 -3.31 -3.31 -3.31 -2.57 -3.31 -2.68 -3.31 -3.31 -3.31 -3.31 -2.43 2.31 2.29 -3.31 -3.31 -3.31 -3.31 -3.31 -3.31 2.44 1 2.25 2.5 1.03 1.6 1.14 1.94 1.64 2.04 1.74 1.67 1.58 1.84 2.17 2 1.76 1.09 1.87 2.61 2.52 -0.02 0.87 2.45 0.84 0.35 0.21 0.33 0.91 -0.84 -1.14 -3.31 -3.31 2.73 2.73 2.74 2.92 3.11 3.02 2.73 2.69 2.64 2.38 2.57 2.72 2.54 2.56 2.86 3.01 3.27 3.19 3.19 2.15 2.81 2.59 1.22 1.63 1.18 -0.75 1.99 -3.3 -0.28 0.87 -2.85 -2.76 -1.43 -3.31 0.85 1.62 -3.31 -3.31 -3.31 1.81 1.01 0.48 2 1.24 -0.27 1.97 0.93 0.74 0.42 0.65 0.39 0.53 0.68 0.33 0.35 0.53 1.45 1.8 1.37 0.74 1.45 1.12 1.98 1.55 1.57 0.95 1.54 1.32 2.06 -0.38 0.45 -0.48 -1.68 -0.54 0.85 1.19 2.74 -2.12 -1.84 -1.54 -1.39 -0.92 1.79 1.08 2.25 1.04 0.91 -0.18 -0.74 -2.63 -3.12 -3.06 -3.31 -3.31 -2.72 -1.2 -3.31 -3.31 -1.09 -1.09 -0.89 -0.75 -0.44 At3g55330 251784_at
photosystem II reaction center PsbP family protein 2
photosynthesis
Photosynthesis Photosystems | additional photosystem II components | psbP family of thylakoid proteins


6.09 6.57
At1g01080 0.851
33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative -1.65 -1.78 -1.23 -1.35 -1.24 -1.26 -1.32 -1.44 -1.12 -1.44 -0.71 -1.13 -1.2 -1.08 -1.23 -1.27 -1.2 -1.71 -1.59 -0.76 -1.17 -1.49 -1.4 1.02 0.49 -1.66 -1.91 -1.89 -2.31 -1.79 -2.09 1.13 0.12 0.68 1.68 0.91 0.93 1.12 1.4 1.33 1.31 1.14 1.11 1.07 1.37 1.42 1.17 1.15 0.93 1.08 0.99 1.37 -0.02 -0.4 1.4 0.83 0.99 0.78 0.36 0.98 -0.21 0.02 -0.59 -0.96 2.11 1.65 1.94 1.91 1.8 1.45 1.36 1.42 1.49 1.61 1.9 1.41 1.74 1.79 2 1.88 1.93 2.23 2.11 1.32 1.68 1.48 0.19 1.39 0.73 -0.51 0.56 -1.65 0.3 0.09 -1.24 -1.54 -0.89 -1.37 0.42 0.77 -1.73 -1.92 -1.39 0.09 -0.34 -0.63 1.32 -0.07 -0.5 1.46 0.88 0.52 -0.22 -0.02 0.26 -0.1 -0.3 -0.25 -0.05 -0.02 0.65 0.84 0.63 0.28 0.3 0.42 1.48 0.47 0.61 0.13 0.85 -0.17 0.87 -1.03 -0.1 -0.93 -2.19 -1.52 0.39 0.82 1.64 -1.36 -1.09 -1.63 -1.75 -1.75 0.14 -1.39 1.12 -0.27 -0.24 -0.62 -1.35 -2.09 -1.75 -1.75 -2.68 -2.23 -0.77 1.01 -2.42 -2.89 0.16 0.16 0.43 0.65 0.81 At1g01080 261577_at
33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative 4



mRNA processing in chloroplast


3.77 5.12
At3g10230 0.851 LYC Encodes lycopene cyclase which catalyzes the formation of beta rings in lycopene. -1.12 -1.66 -1.27 -1.19 -0.96 -1.25 -0.98 -1.04 -1.28 -1.38 -0.08 -1.58 -1.6 -1.4 -1.74 -1.52 -1 -1.48 -1.41 -1.1 -0.89 -0.06 -1.32 1.46 1.2 -0.62 -0.61 -0.55 -0.53 -0.59 -0.32 1.21 -0.06 1.38 0.76 -0.01 0.73 0.82 0.41 0.55 0.78 1.02 0.93 0.82 0.46 0.67 1.05 0.94 0.74 1.06 1.45 1.24 -0.11 0.17 1.84 0.96 -0.5 -0.22 -0.3 0.57 0.04 -0.48 -0.47 -0.82 0.73 0.48 0.49 0.8 1.35 1.57 1.55 1.82 1.58 0.84 0.62 1.22 1.33 0.69 0.63 0.98 1.26 1.86 1.81 0.31 0.76 0.78 0.55 0.56 0.69 0.51 1.72 -0.67 0.08 -0.03 -0.62 -0.47 -0.04 -1.03 0.33 0.26 -0.71 -0.64 -0.79 -0.28 1.02 0.31 0.13 0.4 0.2 0.22 -0.34 -0.42 -0.7 -0.52 -0.54 -0.56 -0.56 -0.5 -0.55 -0.47 0.03 0.25 0.19 0.31 -0.24 0.34 0.28 0.09 0.25 -0.61 0.21 -0.52 1.13 1.14 -0.28 0.88 -0.72 0.39 -0.52 -0.18 0.78 -1.55 -1.62 -1.95 -1.84 -1.56 0.91 0.59 0.34 0.56 0.08 -0.09 -0.33 -0.75 -0.64 -0.59 -0.4 -0.66 -0.65 -0.2 -0.73 -0.51 -0.39 -0.39 -0.35 -0.31 0.04 At3g10230 259140_at LYC Encodes lycopene cyclase which catalyzes the formation of beta rings in lycopene. 10 carotene biosynthesis | lycopene beta cyclase activity
carotenoid biosynthesis Biosynthesis of steroids Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Carotenoid biosynthesis
Carotenoid and abscisic acid metabolism | carotenid biosynthesis
3.00 3.82
At3g48420 0.851
haloacid dehalogenase-like hydrolase family protein -3.18 -3.18 -3.18 -3.18 -3.18 -3.18 -3.18 -3.18 -3.18 -3.18 -3.18 -3.18 -3.18 -3.18 -3.18 -3.18 -3.18 -3.18 -3.18 -3.18 -3.18 -3.18 -3.18 2.91 2.95 -3.18 -3.18 -3.18 -3.18 -3.18 -3.18 2.62 1.36 2.16 3.14 1.12 2.09 2 2.17 1.84 2.39 2.43 2.37 1.96 1.83 2.29 2.54 2.63 2.04 1.6 2.37 3.44 -0.21 -0.33 2.81 0.79 1.19 0.9 0.89 1.49 -0.55 -0.34 -3.18 -3.18 3.1 3.01 3.02 3.1 3.18 2.9 3.01 3.07 3.12 2.86 3.12 2.97 3.11 2.88 3.11 3.29 3.39 3.84 3.67 2.71 3.44 3.14 1.89 2.4 1.93 -0.67 2.29 -3.18 2.1 -3.18 -3.18 -3.18 -3.18 -3.18 0.14 1.32 -3.18 -1.24 -3.18 3.21 1.44 0.67 2.46 1.73 1.23 1.94 0.33 -0.13 -0.42 0.09 -0.47 -0.61 0.85 -0.02 -0.52 -0.66 1.29 2 1.55 1 1.94 1.62 2.6 1.72 1.93 1.74 1.42 1.09 3 1.13 0.48 -0.02 -3.18 -0.92 0.4 1.21 3.16 -3.18 -3.18 -3.18 -3.18 -3.18 2.15 -0.01 2.22 1.66 1.19 -2.43 -3.18 -3.18 -3.18 -3.18 -2.25 -2.5 -3.18 -3.18 -2.14 -2.08 -1.68 -1.68 -3.18 -3.18 -1.18 At3g48420 252366_at
haloacid dehalogenase-like hydrolase family protein 2

superpathway of serine and glycine biosynthesis II | cysteine biosynthesis II | glycine biosynthesis I | serine biosynthesis | photorespiration




6.34 7.02
At5g42270 0.851 VAR1 VAR1 contains a conserved motif for ATPase and a metalloprotease characteristic to FtsH proteins, and is targeted into chloroplasts. A VAR1-fusion protein synthesized in vitro exhibited ATPase activity and partial metalloprotease activity. This protein is -1.71 -1.79 -1.93 -1.52 -1.52 -1.75 -1.74 -2.04 -1.84 -1.57 -0.37 -1.23 -1.43 -1.08 -1.62 -1.69 -1.57 -1.87 -2 -1.69 -1.7 -0.54 0.85 2.42 2.52 -1.96 -2.49 -2.24 -2.23 -2.39 -2.38 2 0.15 1.96 1.44 0.59 1 0.73 1.15 0.79 1.3 1.43 1.23 0.94 1.2 1.22 1.36 1.46 0.65 1.75 1.59 2.11 -0.27 -0.84 1.55 0.8 0.4 0.37 0.64 0.83 0.66 0.12 -0.65 -1.59 1.8 1.58 1.6 1.65 1.81 1.62 2.25 2.31 2.27 1.77 1.76 1.64 2.25 1.94 2.06 1.88 2 2.64 2.49 1.12 1.89 1.89 0.12 0.72 0.28 1.05 1.49 -2.76 -0.82 -1.7 -1.91 -2.8 -2 -1.38 -0.78 0.07 -2.02 -1.82 -1.21 0.08 0.09 -0.74 0.63 0.32 1.14 1.01 0.2 -0.53 -0.5 -0.41 -0.47 -0.78 0.13 -0.37 -0.49 -0.55 0.34 0.82 0.9 1.19 0.37 0.73 0.62 0.16 0.47 -0.65 0.25 -0.67 2.17 2.27 0.12 1.23 -1.96 0.68 -0.67 0.2 1.81 -3.16 -3.37 -3.79 -3.79 -3.79 0.28 0.07 0.57 1.35 1.28 -0.37 -0.42 -0.61 -0.66 -0.83 -0.21 0.1 -0.34 -0.28 -0.19 -0.33 -0.66 -0.66 -0.69 -1 -0.34 At5g42270 249244_at VAR1 VAR1 contains a conserved motif for ATPase and a metalloprotease characteristic to FtsH proteins, and is targeted into chloroplasts. A VAR1-fusion protein synthesized in vitro exhibited ATPase activity and partial metalloprotease activity. This protein is 9 ATPase activity protein degradation
Folding, Sorting and Degradation | Protein folding and associated processing



4.61 6.43
At3g21055 0.850
photosystem II 5 kD protein, putative -4.84 -4.84 -4.84 -4.84 -4.84 -4.84 -4.84 -4.84 -4.84 -4.84 -1.55 -4.84 -4.84 -4.84 -4.84 -4.84 -4.84 -4.84 -4.84 -4.84 -4.84 -1.21 -2.38 2.59 2.27 -4.84 -4.84 -4.84 -4.84 -4.84 -4.84 2.27 1.22 2.35 3.15 1.83 2.2 2.46 2.49 2.25 2.45 2.45 2.64 2.54 2.33 2.29 2.52 2.57 2.27 2.06 2.56 3.08 1.14 2.49 3.16 2.52 1.15 1.38 2.25 2.77 0.25 1.38 -3.2 -0.8 3.08 2.68 2.76 2.85 3.01 3.06 2.96 2.98 3.15 3.23 2.91 2.9 3.17 3.37 3.21 3.14 3.29 3.21 3.32 3.15 3.49 3.44 2.81 2.71 2.67 -1.25 2.44 -4.58 1.15 2.31 -3.04 -4.84 -0.2 -4.84 1.85 3 -4.84 -4.84 -4.84 3.58 2.31 1.77 2.31 1.85 0.65 2.39 1.64 1.15 1.06 1.11 0.77 0.77 1.3 1.12 0.78 0.68 1.34 1.67 1.58 1.15 1.81 1.68 2.45 1.81 2 2.34 1.77 1.8 2.24 0.1 1.01 0.26 -1.37 -0.08 1.01 1.62 2.72 -2.73 -2.37 -4.84 -4.84 -4.84 2.38 0.56 2.61 1.99 2.04 2.25 2.06 0.37 -1.12 -2.47 -4.84 -4.84 -3.94 -2.49 -4.84 -4.84 -2.27 -2.27 -3.37 -2.92 -1.29 At3g21055 256979_at
photosystem II 5 kD protein, putative 4



Photosystems | Photosystem II | Photosystem II protein


8.03 8.42
At3g50820 0.849
Encodes a protein which is an extrinsic subunit of photosystem II and which has been proposed to play a central role in stabilization of the catalytic manganese cluster. In Arabidopsis thaliana the PsbO proteins are encoded by two genes -3.26 -3.26 -3.26 -3.26 -1.4 -3.26 -3.26 -3.26 -3.26 -3.26 0.67 -3.26 -3.26 -3.26 -3.26 -3.26 -3.26 -3.26 -3.26 -3.26 -3.26 0.51 -3.26 2.67 2.61 -3.26 -3.26 -3.26 -3.26 -3.26 -3.26 2.12 0.89 2.54 2.92 1.46 2.04 2.52 2.11 2.12 2.21 2.35 2.62 2.58 2.34 2.12 2.4 2.5 2.37 1.95 2.34 2.99 0.45 1.3 3.2 2.25 0.38 0.61 1.94 2.44 0.27 0.63 -3.26 -3.05 2.6 2.18 2.33 2.48 2.66 2.8 2.57 2.81 2.96 2.79 2.37 2.43 3.04 2.75 2.74 2.4 2.68 2.91 2.86 2.62 3.01 2.91 2.25 1.83 1.98 0.34 2.33 -3.26 1.96 1.1 -3.26 -3.26 -0.12 -3.26 0.39 1.4 -3.26 -2.44 -3.26 2.52 1.76 0.68 1.74 1.34 1.43 1.76 0.52 -0.71 0.11 0.56 -0.26 -0.38 0.87 0.44 0 -0.11 0.8 1.38 0.88 0.64 1.3 1.01 1.8 1.26 1.41 0.82 1.2 0.91 2.17 0.75 -0.16 -0.69 -2.43 -1.56 -0.53 0.69 2.62 -3.26 -3.26 -3.26 -3.26 -3.26 1.38 1.18 2.23 1.96 2.06 0.9 0.37 -3.26 -3.26 -3.26 -3.26 -3.26 -3.26 -3.26 -3.26 -3.26 -3.26 -3.26 -3.26 -3.26 -3.16 At3g50820 252130_at
Encodes a protein which is an extrinsic subunit of photosystem II and which has been proposed to play a central role in stabilization of the catalytic manganese cluster. In Arabidopsis thaliana the PsbO proteins are encoded by two genes 7 photosystem II assembly | photosystem II stabilization photosynthesis
Photosynthesis Photosystems | Photosystem II


6.11 6.46
At5g13730 0.849 SIGD RNA polymerase sigma subunit SigD (sigD) / sigma-like factor (SIG4) -2.29 -2.29 -2.29 -2.29 -2.29 -2.29 -2.29 -2.29 -2.29 -2.29 0.45 -2.29 -2.29 -2.29 -2.29 -2.29 -2.29 -2.29 -2.29 -2.29 -2.29 -2.29 -2.29 2.68 3.45 -2.29 -2.29 -2.29 -2.29 -2.29 -2.29 1.63 1.64 2.35 2.08 0.42 1.12 1.55 2.35 2.13 2.16 1.71 1.33 1.9 2.5 2.48 2.12 1.49 1.39 1.95 1.27 2.06 -1.1 0.51 2.41 1.77 1.04 1.05 -0.36 0.51 0.21 -0.43 -2.29 -2.29 3.25 3.2 2.63 2.87 2.67 2.02 1.73 2.27 2.31 2.87 3.31 1.75 2.42 2.93 3.41 3.23 2.91 2.49 2.37 1.77 2.19 2.06 1.59 2.46 0.84 -1.03 1.6 -2.29 -0.15 -2.29 -2.29 -2.29 -2.29 -2.29 1.27 2.2 -2.29 -2.29 -2.29 1.35 0.94 0.78 1.62 0.91 1.07 1.48 0.08 -0.13 -0.83 -0.74 -1.12 -1.7 -1.45 -2.02 -2.22 -1.98 1.19 1.72 0.95 0.38 0.56 -0.61 0.92 1.65 1.24 0.6 1.05 0.78 1.93 -0.48 -0.78 -2.31 -2.29 -2.29 -0.35 0.71 2.71 -2.29 -2.29 -2.29 -2.29 -2.29 2.1 0.96 1.92 1.09 0.36 -2.29 -2.29 -2.29 -2.29 -2.29 -2.19 -1.09 -2.06 -0.69 -0.9 -2.29 -0.27 -0.27 -1.18 -0.98 -0.13 At5g13730 250255_at SIGD RNA polymerase sigma subunit SigD (sigD) / sigma-like factor (SIG4) 8 transcription initiation


Transcription (chloroplast)


5.17 5.75
At3g54210 0.848
ribosomal protein L17 family protein -1.89 -1.75 -1.51 -1.88 -1.76 -1.7 -2.13 -1.94 -1.87 -1.76 -0.59 -2.34 -2.62 -2.27 -2.63 -2.33 -2.42 -1.54 -2.25 -2.02 -2.75 -1.22 -1.5 1.63 1.25 -2.49 -2.1 -2.14 -2.08 -1.9 -2.33 1.29 0.05 1.24 1.71 1.12 0.88 0.95 1.2 1.03 1.05 1.05 1.26 1.07 1.12 1.1 1.17 1.26 0.88 1.36 1.32 1.58 -0.08 0.65 1.5 0.74 0.23 0.45 0.59 0.98 -0.61 -0.02 -1.62 -1.34 1.55 1.52 1.46 1.47 1.56 1.47 1.43 1.29 1.42 1.44 1.49 1.99 1.98 2.1 2.15 2.13 2.16 2.1 2.06 1.81 2.06 1.81 1.23 1.4 1.05 -1.07 0.55 -1.93 -0.22 -0.11 -1.97 -2.38 -1.22 -2.37 0.64 1.67 -2.64 -2.46 -2.35 0.79 0.28 -0.23 1.1 0.22 -0.37 1.59 0.98 0.24 0.32 0.57 0.23 -0.04 0.48 0.33 0.14 -0.05 0.62 0.82 0.63 0.15 0.26 0.4 1.19 0.72 0.72 0.1 0.47 0.53 1.24 -0.5 0.6 -0.39 -1.03 -0.78 0.15 0.73 1.73 -0.25 -0.52 -1.89 -2.27 -2.61 0.36 -0.42 1.37 0.65 0.73 0.21 -0.28 -0.28 -0.63 -0.69 -0.78 -0.78 -0.44 0.11 -0.67 -0.75 -0.39 -0.39 -0.69 -0.44 0.2 At3g54210 251883_at
ribosomal protein L17 family protein 2
protein synthesis | ribosome biogenesis | biogenesis of chloroplast
Ribosome



4.31 4.91
At1g74970 0.847 RPS9 ribosomal protein S9, nuclear encoded component of the chloroplast ribosome -2.1 -3.1 -2.49 -2.06 -2.48 -2.15 -1.83 -1.86 -2.39 -2.24 -1.18 -2.84 -3.52 -2.13 -1.99 -1.95 -1.95 -1.92 -1.79 -2.27 -2.06 -2.23 -2.58 2.08 2.02 -1.29 -1.24 -1.32 -1.64 -1.4 -1.77 1.83 0.16 2 2.02 1.21 0.86 0.76 1.22 1 1.12 1.07 1.34 1.02 1.19 1.31 1.05 1.18 1.01 1.97 1.46 1.6 -0.11 0.18 1.97 1.57 0.63 0.77 1.21 1.43 -0.6 0.08 -2.34 -1.62 1.86 1.82 1.64 1.79 1.86 1.96 1.61 1.68 1.72 1.52 1.48 2.1 2 1.95 2.25 2.1 2.29 2.35 2.31 2 2.13 1.72 0.87 0.76 0.48 -0.67 0.67 -2.04 -1 -1.15 -1.51 -2.14 -0.52 -2.48 0.65 1.71 -2.45 -2.08 -2.31 0.21 -0.18 -0.79 1.34 0.36 -0.62 2.39 1.68 0.99 0.91 0.98 0.71 0.48 0.85 0.73 0.44 0.47 1.12 1.34 0.85 0.64 0.86 0.99 1.91 0.83 0.65 0.09 1.01 0.27 1.09 -1.03 0.38 -1.34 -2.18 -1.93 0.65 1.28 2.41 -1.57 -1.33 -2.06 -2.06 -2.06 -0.1 -1.23 1.76 0.53 0.42 -0.51 -1.28 -2.23 -2.06 -2.2 -1.91 -1.72 -0.75 -0.62 -1.55 -2.22 0.15 0.15 -0.19 0.01 0.93 At1g74970 262172_at RPS9 ribosomal protein S9, nuclear encoded component of the chloroplast ribosome 6 plastid protein biosynthesis

Ribosome



4.47 5.93
At1g45474 0.846 LHCA5 chlorophyll A-B binding protein, putative -2.54 -2.54 -2.54 -2.54 -2.54 -2.54 -2.54 -2.54 -2.54 -2.54 -0.66 -1.34 -2.54 -2.54 -2.54 -2.54 -2.54 -2.54 -2.54 -2.54 -2.54 1.66 0.96 1.82 1.87 -2.54 -2.54 -2.54 -2.54 -2.54 -2.54 1.42 0.26 1.63 1.83 0.37 1.3 1.18 1.13 1.38 1.39 1.5 1.86 1.28 1.38 1.39 1.65 1.75 1.26 1.6 1.74 2.02 0 0.82 2.1 0.75 0.57 0.33 0.43 0.85 -0.12 -0.19 -2.54 -2.54 1.84 1.79 1.72 1.98 2.19 2.14 2.15 2.23 2.29 2.1 1.88 2 2.2 2.22 2.18 2.27 2.52 2.52 2.42 1.42 2.11 2.11 0.92 1.42 1.29 0.31 2.18 -2.54 -0.51 -0.93 -2.54 -2.54 -2.54 -2.54 0.46 1.11 -2.21 -2.25 -2.54 0.54 0.8 0.55 1.15 0.59 -0.22 1.38 0.48 -0.05 -0.41 -0.02 -0.54 -0.55 0.82 0.56 0.4 0.61 0.69 0.82 0.84 0.74 0.5 0.2 0.84 0.75 1.11 0.01 0.96 -0.07 1.5 1.08 0.48 0.4 -1.54 0.11 0.17 0.59 2.19 -1.09 -1.24 -2.54 -2.54 -2.54 1.12 0.73 1.35 0.41 0.27 -0.76 -0.6 -0.67 -0.98 -1.44 -0.7 -0.64 -1.26 -0.59 -0.84 -0.8 -2.25 -2.25 -1.07 -0.97 0.47 At1g45474 245806_at LHCA5 chlorophyll A-B binding protein, putative 8



Photosystems | Chlorophyll a/b binding proteins | light harvesting complex


4.75 5.09
At2g38170 0.846 CAX1 calcium exchanger, high affinity calcium antiporter -3.15 -3.32 -3.32 -3.02 -3.65 -3.22 -2.96 -2.7 -2.68 -4.25 -1.97 -1.18 -2.69 -3.01 -3.05 -2.87 -2.47 -3.2 -3.46 -3.35 -3 0.25 -2.54 1.99 1.57 -3.14 -4.25 -3.01 -3.41 -3.22 -3.39 1.92 1.13 1.08 1.29 1.97 1.09 0.95 0.99 1.4 1.31 1.2 1.03 0.73 0.95 1.42 1.43 1.46 1.41 1.26 1.77 2.69 1.13 0.54 2.04 1.87 2.38 2.5 1.99 1.8 0.71 1.06 -0.38 -0.74 1.73 1.81 1.86 2.45 2.5 2.31 2.13 1.6 2.18 1.46 1.7 2.35 2.12 1.81 2.02 2.52 2.47 0.55 0.44 1.86 2.04 2.35 1.52 1.8 2 2.25 2.58 -1.27 -0.25 -0.05 -1.03 -0.52 -0.41 -1.34 1.28 0.69 -0.92 -1.21 -1.05 2.04 0.86 0.88 0.96 1.89 1.03 0.92 0.27 -0.19 -1.24 -1.21 -0.97 -0.97 -0.55 -1.38 -1.13 -0.44 0.99 2.06 2 1.9 1.65 1.75 1.63 1.45 1.63 2.04 0.85 0.67 2.64 2.22 1.6 1.91 1.94 2.27 1.15 1.46 2.17 -3.69 -3.04 -4.25 -4.25 -3.61 2.09 2.36 0.56 1.97 1.54 0.46 -0.28 -1.62 -2.82 -2.49 -3 -3.11 -3.04 -3.36 -3.18 -3.18 -0.43 -0.43 -3.11 -3.68 -1.23 At2g38170 267093_at CAX1 calcium exchanger, high affinity calcium antiporter 9 calcium:hydrogen antiporter activity | calcium ion transport

Membrane Transport | Other ion-coupled transporters



5.82 6.95
At5g08280 0.846
hydroxymethylbilane synthase / porphobilinogen deaminase, chloroplast / pre-uroporphyrinogen synthase -1.71 -1.48 -1.63 -1.75 -1.4 -1.28 -1.64 -1.41 -1.8 -1.32 -0.95 -1.85 -2 -1.46 -1.19 -1.28 -1.57 -1.64 -1.99 -2.2 -2.13 -1.83 -0.95 1.34 0.75 -1.5 -1.84 -1.85 -1.7 -1.86 -1.9 1.29 -0.47 1.02 1.97 1.1 0.81 1.37 1.44 1.27 0.99 1.15 1.29 1.58 1.61 1.14 1.22 1.23 0.94 1.23 1.26 1.37 0.03 -0.47 1.22 0.63 0.03 0.17 0.33 0.69 0.17 0.1 -0.96 -1.54 1.46 1.18 1.12 1.19 1.28 1.14 1.06 0.67 1.22 1.49 1.44 1.9 2.13 2.38 2.17 1.93 1.99 1.84 1.87 1.53 1.6 1.19 0.52 0.66 0.28 -0.42 -0.06 -1.52 0.01 -0.96 -1.55 -1.87 -1.37 -1.03 0.07 1.25 -1.31 -1.25 -1.13 0.69 -0.47 -1.29 1.28 -0.17 -1.19 1.88 1.36 0.54 0.64 0.86 0.74 0.12 0.88 0.75 0.37 0.19 0.63 0.69 0.28 0.04 0.36 0.48 1.38 0.43 0.67 0.59 0.56 0.33 0.37 -1.02 0.8 -0.42 -1.21 -0.77 0.02 0.71 1.72 -2.82 -2.95 -2.91 -2.91 -2.91 -1.09 -0.9 1.02 0.27 0.5 0.44 -0.18 -1.45 -1.61 -1.74 -0.37 -0.28 -0.36 0.56 -0.27 0.01 0.16 0.16 0.36 0.21 0.91 At5g08280 246033_at
hydroxymethylbilane synthase / porphobilinogen deaminase, chloroplast / pre-uroporphyrinogen synthase 10 chloroplast | porphyrin biosynthesis metabolism chlorophyll biosynthesis | biosynthesis of proto- and siroheme Porphyrin and chlorophyll metabolism Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Chlorophyll biosynthesis and breakdown
chlorophyll and phytochromobilin metabolism | chlorophyll and phyochromobilin biosynthesis
3.82 5.32
At5g64040 0.846 PSI-N Encodes the only subunit of photosystem I located entirely in the thylakoid lumen. May be involved in the interaction between plastocyanin and the photosystem I complex. -4.38 -4.38 -4.38 -4.38 -4.38 -4.38 -4.38 -4.38 -4.38 -4.38 -0.34 -4.38 -4.38 -4.38 -4.38 -4.38 -4.38 -4.38 -4.38 -4.38 -4.38 -0.42 -2.44 2.56 2.76 -4.38 -4.38 -4.38 -4.38 -4.38 -4.38 2.24 1.08 2.81 3.23 1.25 2.34 2.64 2.29 2.02 2.04 2.35 2.77 2.7 2.31 1.91 2.25 2.52 2.5 2.25 2.5 3.07 1.01 2.74 3.13 2.72 0.52 0.78 2.46 2.91 -0.42 0.64 -3.01 -2.1 2.69 2.17 2.16 2.23 2.47 2.85 2.88 2.87 3.05 2.98 2.5 3.1 3.46 3.42 3.15 2.72 3.01 2.93 3.02 2.89 3.23 3.21 2.48 2.47 2.89 -0.06 2.54 -3.82 2.04 2.78 -2.72 -4.38 -0.09 -3.43 1.94 2.69 -3.02 -3.3 -3.68 2.89 2.5 1.2 2.16 2.1 0.93 2.31 1.4 0.67 1.35 1.63 1.15 1.11 1.83 1.42 0.97 0.74 1.54 1.98 1.62 1.51 1.83 1.68 2.42 1.61 1.88 1.9 1.74 1.43 2.48 1.06 1.32 1.19 -1.67 0.42 0.82 1.69 2.96 -4.38 -3.57 -4.38 -4.38 -4.38 1.68 -0.66 2.43 1.99 1.8 1.07 0.59 -1.33 -4.38 -4.38 -4.38 -4.38 -4.38 -3.89 -4.38 -4.38 -2.11 -2.11 -4.38 -4.38 -3.99 At5g64040 247320_at PSI-N Encodes the only subunit of photosystem I located entirely in the thylakoid lumen. May be involved in the interaction between plastocyanin and the photosystem I complex. 8 calmodulin binding | photosystem I (sensu Viridiplantae) | photosynthetic electron transport in photosystem I

Photosynthesis Photosystems | Photosystem I | photosystem I reaction center


7.44 7.83
At2g15050 0.844
lipid transfer protein, putative, similar to nonspecific lipid-transfer protein A precursor (LTP A) (Wax-associated protein 9A) (Brassica oleracea) -2.66 -2.66 -2.66 -2.66 -2.66 -2.66 -2.66 -2.66 -2.66 -2.66 -2.66 -2.66 -2.66 -2.66 -2.66 -2.66 -2.66 -2.66 -2.66 -2.66 -2.66 -2.66 -2.66 2.82 1.38 -2.66 -2.66 -2.66 -2.66 -2.66 -2.66 2.33 2.5 2.13 2.71 1.47 2.25 2.18 2.29 2.42 2.68 2.4 2.49 2.02 2.25 2.54 2.42 2.27 2.69 1.21 2.58 2.87 3.42 2.74 3.11 2.33 2.24 1.71 0.39 0.4 -0.93 -0.47 -2.66 -2.66 2.49 1.92 2.11 2.66 2.85 2.5 2.16 2.97 2.9 2.82 2.76 1.87 2.56 2.57 2.65 2.4 2.44 -0.42 -0.01 2.04 2 1.81 2 2.4 1.93 1.42 2.94 -2.66 -0.42 0.61 -2.66 -2.66 -2.66 -2.66 1.68 1.56 -2.66 -2.66 -2.66 3.15 3.78 1.53 1.33 2.68 -0.1 1.23 1.35 0.91 0.3 0.5 0.06 0.68 0.16 0.24 0.05 0.53 0.65 0.72 0.44 0.1 -0.15 -0.6 -0.2 0.48 0.54 1.24 0.64 -0.5 1.1 -1.05 -1.47 -1.66 -2.27 -2 -0.33 0.2 3.33 -2.66 -2.66 -2.66 -2.66 -2.66 2.35 0.85 1.63 1.06 0.28 -2.66 -2.66 -2.66 -2.66 -2.66 -2.66 -2.66 -2.66 -1.65 -2.66 -2.66 -1.11 -1.11 -2.66 -2.66 -0.89 At2g15050 265894_at
lipid transfer protein, putative, similar to nonspecific lipid-transfer protein A precursor (LTP A) (Wax-associated protein 9A) (Brassica oleracea) 2




Miscellaneous acyl lipid metabolism

5.52 6.44
At4g09010 0.844
L-ascorbate peroxidase, chloroplast, putative -3.59 -3.59 -3.59 -3.59 -3.59 -3.59 -3.59 -3.59 -3.59 -3.59 -3.59 -3.59 -3.59 -3.59 -3.59 -3.59 -3.59 -3.59 -3.59 -3.59 -3.59 -3.59 -3.59 2.93 2.77 -3.59 -3.59 -3.59 -3.59 -3.59 -3.59 2.2 0.56 2.47 2.82 1.2 2.72 3 2.54 2.42 2.41 2.9 3.09 3.04 2.81 2.29 2.57 2.91 2.52 1.22 1.91 3.08 0.93 0.72 3.4 2 0.78 1.07 1.76 2.19 0.21 0.82 -3.59 -3.59 2.69 2.6 2.34 2.54 2.6 2.79 2.71 2.61 2.88 2.85 2.52 3.1 3.52 3.61 3.48 3.05 3.36 3.1 3.22 2.64 3.16 2.87 1.97 2.31 2.25 -1.64 1.32 -3.59 -0.95 -3.59 -3.59 -3.59 -0.48 -3.59 1.24 2.88 -3.59 -3.59 -3.59 2.06 0.91 0.41 2.57 1.11 -0.26 2.79 2.02 1 1.79 1.9 1.38 1.22 1.98 1.44 1.13 1.15 1.72 2 1.56 1.24 1.6 1.18 2.29 1.87 1.95 1.45 1.85 1.35 2.18 -0.7 1.49 -0.34 -1.15 -1.58 1.02 1.88 2.99 -3.59 -3.59 -3.59 -3.59 -3.59 0.8 -1.26 2.79 1.48 1.3 0.86 0.25 -2.37 -3.59 -3.59 -3.59 -3.59 -3.59 -3.59 -3.59 -3.59 -0.26 -0.26 -3.59 -3.59 -3.59 At4g09010 255078_at
L-ascorbate peroxidase, chloroplast, putative 4


Ascorbate and aldarate metabolism Cell Wall Carbohydrate Metabolism | ascorbic acid biosynthesis


6.68 7.20
At5g45930 0.844 CHLI2 encodes a second Chl I gene (CHLI2), a subunit of magnesium chelatase which is required for chlorophyll biosynthesis. Protein not detectable in wild type and is targeted for rapid degradation in vivo. -2.31 -2.31 -2.31 -2.31 -2.31 -2.31 -2.31 -2.31 -2.31 -2.31 -0.52 -2.31 -2.31 -2.31 -2.31 -2.31 -2.31 -0.98 -2.31 -2.31 -2.31 -2.31 -2.31 2 1.24 -2.31 -2.31 -2.31 -2.31 -2.31 -2.31 1.57 0.02 1.74 1.86 1.33 1.51 1.81 1.71 1.8 1.43 1.4 1.75 1.82 1.92 1.43 1.57 1.56 1.62 1.45 1.31 1.98 0.04 -1.08 2.48 1.19 0.89 0.44 0.27 1.14 -2.31 -0.23 -2.31 -2.31 2.19 1.96 1.67 1.87 1.83 1.91 1.42 1.42 1.89 2.38 2.13 2.08 2.49 2.74 2.75 2.29 2.38 2.25 2.13 2 2.42 2 0.61 1.76 1.22 -1.62 0.79 -2.31 0.06 0.08 -2.31 -2.31 -2.31 -2.31 0.8 1.45 -2.31 -2.31 -2.31 2.04 -0.11 -2.31 1.02 0.5 -2.31 2.64 1.91 0.7 1.12 1.3 1.18 0.65 1.01 0.73 0.53 0.44 1.11 1.45 1.2 0.84 0.41 0.6 1.94 0.3 0.28 1.7 1.39 0.24 1.46 -1.31 1.3 -0.13 -0.65 -0.83 0.56 1.43 2.89 -2.31 -2.31 -2.31 -2.31 -2.31 0.77 -1.3 1.98 0.69 0.56 -0.54 -0.91 -2.31 -2.31 -2.31 -2.31 -2.31 -2.31 0.18 -2.31 -2.31 -0.34 -0.34 -0.63 -1.18 1.35 At5g45930 248920_at (m) CHLI2 encodes a second Chl I gene (CHLI2), a subunit of magnesium chelatase which is required for chlorophyll biosynthesis. Protein not detectable in wild type and is targeted for rapid degradation in vivo. 6 chlorophyll biosynthesis | magnesium chelatase complex
chlorophyll biosynthesis
Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Chlorophyll biosynthesis and breakdown


4.67 5.21
At5g60600 0.843 CLB4 encodes for hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (HDS) -1.71 -1.81 -1.54 -1.7 -1.68 -1.7 -1.5 -1.64 -1.59 -1.65 -0.85 -0.91 -1.2 -1.09 -1.31 -1.4 -1.68 -1.86 -0.87 -1.37 -0.64 -0.65 -1.89 1.3 1.3 -1.21 -1.17 -1.07 -0.8 -0.86 -0.95 1.18 0.56 0.96 1.55 0.48 0.53 0.76 0.89 0.7 0.9 0.84 0.95 0.75 0.9 1.09 1.25 1.18 0.77 0.07 0.16 1.92 -0.63 0.26 1.89 1.03 1.12 1.23 1.35 1.5 1.75 1.11 0.83 -0.66 1.33 1.26 1.31 1.32 1.33 1.23 1.39 1.45 1.52 1.45 1.43 1.34 1.66 1.63 1.56 1.55 1.61 1.55 1.37 0.82 1.45 1.62 0.31 0.8 0.64 1.4 1.69 -1.91 0.05 -0.83 -2.24 -1.87 -1.34 -1.81 -0.21 0.08 -2.02 -1.72 -1.7 0.2 0.19 0.28 -0.01 -0.28 0.69 0.71 -0.11 -0.57 -0.91 -0.66 -0.69 -0.99 -0.67 -0.86 -0.85 -0.81 0.09 0.5 0.47 0.68 0.09 0.4 0.21 -0.04 0.07 -0.03 0.35 -0.53 1.51 1.65 0.14 0.86 -0.49 0.96 -0.19 0.09 1.09 -2.18 -2.13 -3.01 -2.6 -2.5 0.52 0.45 0.34 0.9 0.84 0.19 0.04 -0.57 -0.72 -0.7 -0.33 -0.13 -0.53 -0.96 -0.4 -0.97 0.13 0.13 -0.75 -0.88 -0.69 At5g60600 247637_at CLB4 encodes for hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (HDS) 6


Biosynthesis of steroids Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Biosynthesis of prenyl diphosphates
IPP (isopentenyl diphosphate) and DMAPP (dimethylallyl diphosphat) biosynthesis | MEP (methylerythritol P) pathway, plastids
3.48 4.93
At1g68010 0.842 HPR Encodes hydroxypyruvate reductase. -3.82 -4.09 -3.32 -2.89 -3.17 -2.93 -3.05 -3.14 -3.49 -3.52 0.09 -1.34 -2.48 -2.59 -2.84 -3.01 -3.05 -4.2 -4.2 -3.66 -4.2 -0.94 -1.52 2.66 2.93 -4.2 -4.2 -4.2 -4.2 -4.26 -4.2 2.4 1.49 2.9 2.43 0.87 2.08 2.11 1.71 2.14 2.4 2.25 2.19 2.04 1.8 2.21 2.31 2.29 1.93 1.98 2.37 2.68 0.38 1.98 3.07 2.49 0.83 0.94 2.16 2.57 0.22 -0.05 -3.29 -2.81 2.69 2.4 2.42 2.54 2.68 2.78 2.81 2.95 2.91 2.57 2.59 2.36 2.76 2.24 2.65 2.69 2.84 2.94 3 2.13 2.81 2.83 2.22 2.56 2.35 1.18 2.49 -4.2 1.32 -0.03 -3.52 -4.2 0.11 -4.22 1.22 1.78 -4.2 -3.65 -4.21 1.96 1.54 1.83 1.77 1.32 1.94 1.4 0 -0.59 -0.72 -0.48 -0.88 -0.9 0.13 -0.55 -0.89 -0.87 0.83 1.53 1.28 1.09 1.34 1.18 1.46 1.56 1.78 0.64 0.75 0.38 2.36 1.51 -0.36 0.34 -1.84 -0.07 -0.1 0.81 2.39 -3.45 -3.09 -3.1 -3.31 -2.59 1.75 0.93 1.55 1.57 1.49 -0.68 -1 -2.75 -3.41 -3.91 -0.28 -0.28 -1.47 -2.27 -0.21 -1.04 -1.01 -1.01 -3.58 -3.66 -1.74 At1g68010 260014_at HPR Encodes hydroxypyruvate reductase. 6 photorespiration
serine-isocitrate lyase pathway | formaldehyde assimilation I (serine pathway) | photorespiration




7.02 7.34
At4g02770 0.842
photosystem I reaction center subunit II, chloroplast, putative / photosystem I 20 kDa subunit, putative / PSI-D, putative (PSAD1) -4.78 -4.78 -4.78 -4.78 -3.16 -3.7 -3.38 -3.43 -4.78 -3.74 -0.47 -2.52 -2.84 -2.83 -3.22 -3.77 -4.78 -3.82 -4.78 -4.78 -4.78 -1.53 -1.7 2.35 2.36 -3.19 -3.97 -3.28 -3.14 -3.5 -4.34 1.81 1.13 2.33 2.97 1.69 2.23 2.44 2.23 1.77 2.02 2.17 2.64 2.43 2.16 1.92 2.14 2.49 2.29 1.54 2.21 2.93 0.99 2.2 2.8 2.4 1.11 1.2 1.96 2.21 0.28 0.95 -1.96 -0.7 2.73 2.25 2.27 2.08 2.19 2.44 2.52 2.74 3.01 2.96 2.62 2.63 3.31 3.32 2.94 2.37 2.74 2.67 2.8 2.81 3.11 3.12 2.24 2.67 2.94 0.34 2.47 -4.63 0.94 0.71 -3.12 -4.78 0.52 -2.9 1.69 2.78 -3.35 -2.35 -3.01 3.08 2.29 1.96 1.89 1.89 1.47 2.16 1.51 0.89 1.04 1.34 0.85 0.91 1.32 0.89 0.67 0.53 1.35 1.59 1.18 1.03 1.5 1.5 2.12 1.38 1.54 1.85 1.39 1.13 1.98 0.32 0.86 0.91 -1.35 0.33 0.61 1.41 2.31 -4.05 -3.56 -4.78 -4.78 -4.78 1.71 0.25 2.25 2.02 1.99 1.5 0.78 -1.03 -3.26 -3.33 -4.49 -4.78 -3.66 -3.8 -4.01 -4.71 -2.02 -2.02 -4.78 -4.78 -3.57 At4g02770 255457_at
photosystem I reaction center subunit II, chloroplast, putative / photosystem I 20 kDa subunit, putative / PSI-D, putative (PSAD1) 4
photosynthesis | biogenesis of chloroplast
Photosynthesis Photosystems | Photosystem I | photosystem I reaction center


7.72 8.10
At5g35790 0.842
Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is more prevalent in developing organs but absent in the root. -2.9 -2.9 -2.9 -2.9 -2.9 -2.9 -2.9 -2.9 -2.9 -2.9 1.8 -2.9 -2.9 -2.9 -2.9 -2.9 -2.9 -2.9 -2.9 -2.9 -2.9 0.31 -1.03 1.62 2.11 -2.9 -2.9 -2.9 -2.9 -2.9 -2.9 0.8 0.59 2.09 1.32 0.61 0.82 1.14 1.25 0.87 0.94 1.26 1.57 1.47 1.21 1.13 1.05 1.23 0.97 0.48 1.17 2.19 1.31 -0.02 2.56 1.29 -0.48 -0.49 -0.69 0.65 0.23 -0.65 -1.53 -0.61 1.72 2.11 1.8 1.87 2.27 2.54 0.95 1.79 2.38 1.82 1.88 2.19 2.7 2.27 1.91 2.42 2.74 1.23 1.67 2.21 2.11 2 1.45 1.06 0.8 -0.13 1.84 -2.9 -0.84 -2.11 -2.18 -2.9 -0.28 -2.9 1.29 1.67 -2.68 -2.68 -2.9 1.17 1.53 0.51 1.02 1.59 0.15 2.08 1.67 1.65 1.75 1.8 1.93 1.86 0.44 0.75 0.76 0.78 1.65 1.66 1.27 1.13 0.49 0.07 0.54 1.17 0.75 1.37 1.41 0.55 1.38 -0.32 1.34 0.23 -1.01 -0.3 1.32 1.34 2.17 -2.16 -2.14 -2.9 -2.9 -2.9 1.55 0.62 1.78 1.15 1.12 1.31 0.51 -0.16 -2.9 -1.4 -0.41 -0.51 -2.9 -1.37 -1.06 -2.63 -1.4 -1.4 -1.96 -1.65 -0.35 At5g35790 249694_at
Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is more prevalent in developing organs but absent in the root. 10 glucose-6-phosphate 1-dehydrogenase activity | glucose metabolism | pentose-phosphate shunt, oxidative branch C-compound and carbohydrate metabolism | pentose-phosphate pathway oxidative branch of the pentose phosphate pathway Pentose phosphate pathway | Glutathione metabolism Intermediary Carbon Metabolism


5.10 5.64
At2g43920 0.841
similar to thiol methyltransferase 1 from Brassica oleracea -4.36 -4.36 -4.36 -4.36 -4.36 -4.36 -4.36 -4.36 -4.36 -4.36 -4.36 -2.31 -4.36 -4.36 -4.36 -4.36 -4.36 -4.36 -4.36 -2.08 -4.36 -1.61 1.31 3.15 3.05 -0.72 -1.99 -4.36 -1.68 -4.36 -2.06 2.52 2.5 3.17 2.7 2.4 2.35 2.29 2.04 2.37 2.43 2.23 2.18 2.22 1.99 2.21 2.21 2.27 2.29 3.03 3.12 2.19 2.87 2.06 2.86 2.09 1.26 1.29 1.34 1.77 1.37 1.32 0.54 -2.65 1.86 1.55 1.84 1.76 1.97 2.04 2.1 2.5 2.16 1.91 1.71 2.43 2.39 2 1.96 2.29 2.57 2.08 2.33 1.75 1.62 1.47 0.91 1.83 1.93 0.68 1.63 0.78 1.43 0.77 0.91 0.83 1.63 2.29 1.34 1.23 2.37 2.4 2.29 0.26 0.3 -0.93 0.53 0.33 0.05 1.9 1.61 0.69 0.16 0.13 -0.08 0.06 0.43 -0.31 -0.48 -0.46 1.04 1.15 1.19 1.19 1.28 1.31 0.63 1.18 1.25 0.71 1.56 -0.45 1.83 0.66 1.19 1.36 -0.93 1.89 0.7 0.87 1.44 -3.12 -4.01 -4.36 -4.36 -4.36 0.26 -0.35 0.3 -0.3 -0.98 -3.23 -0.73 -2.92 -2.71 -3.51 -4.36 -4.36 -4.01 -1.26 -4.36 -4.69 0.14 0.14 -4.36 -4.36 0.56 At2g43920 267233_s_at
similar to thiol methyltransferase 1 from Brassica oleracea 4

carbon monoxide dehydrogenase pathway




6.91 7.87
At2g03550 0.840
similar to PrMC3 (Pinus radiata) -2.39 -2.39 -2.39 -2.39 -2.39 -2.39 -2.39 -2.39 -2.39 -2.39 -2.39 -2.39 -2.39 -2.39 -2.39 -2.39 -2.39 -2.39 -2.39 -2.39 -2.39 -2.39 -2.39 1.69 1.25 -2.39 -2.39 -2.39 -2.39 -2.39 -2.39 1.9 1.27 2 2.35 0.47 1.29 1.09 1.81 1.84 1.86 1.66 1.46 1.08 1.88 2.15 1.81 1.73 1.75 -0.84 -0.19 2.35 0.09 1.83 2.7 1.8 0.87 1.12 -0.34 0.22 0.82 0.28 -1.21 -2.39 3.07 2.66 2.52 2.99 2.87 2.37 2.38 2.91 2.56 2.78 3.24 1.59 1.83 2.16 2.84 2.52 2.2 2.45 2.36 1.94 2.33 2.38 0.38 2.68 2.04 1.31 2.87 -2.39 -2.39 -2.39 -2.39 -2.39 -2.39 -2.39 0.59 1.78 -2.39 -2.39 -2.39 0.11 1.85 1.45 1.23 1.23 1.06 0.85 0.67 1.49 -0.11 0.56 0.85 1.17 -0.8 0.28 0.62 1.11 1.7 2.02 1.38 1.07 1.19 0.72 0.95 1.53 1.26 0.79 1.71 0 2.02 0.73 -0.18 0.01 -2.16 -0.52 0.78 0.76 1.63 -2.39 -2.39 -2.39 -2.39 -2.39 1.24 0.93 0.85 0.84 0.04 -2.39 -2.39 -2.39 -2.39 -2.39 -2.39 -2.39 -2.39 -2.39 -2.39 -2.39 -1.08 -1.08 -2.39 -2.39 -2.39 At2g03550 265699_at
similar to PrMC3 (Pinus radiata) 2






carboxylesterase 5.09 5.63


























































































































































































page created by Juergen Ehlting 07/05/06