Co-Expression Analysis of: CYP72A11 (At3g14650) Institut de Biologie Moléculaire des Plantes

















































































































































































































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Stress Data Set save / view heatmap as: OpenOffice Table annotation details for co-expressed genes can be found to the right of the heatmap
































































































































































































































MS Excel table
































































































































































































































save / view all data as: Tab delimited table For further information on the experiments please go to the Genevestigator database using the experiment-ID given in brackets.





























































































































































































































shown are a maximum of 50 genes with r>0.5 (If more co-expressed genes with r>0.5 exist, they can be saved as Tab delimited data only) magnitude of change [log2(treatment / control)]    0   0.3   0.6   0.9  1.2   1.5   1.8   2.1   2.4   2.7   >3






















































































































































































































greater than zero                                                         


























































































































































































































less than zero                                                         


























































































































































































































Locus r-value Name Description Agrobacterium tumefaciens, tumor at stem (8) Myzus persicae, 8h, leaf (82) Gigaspora rosea, 3d, roots (23) Heterodera schachtii, 21d, roots (24) Pseudomonas syringae hrpA, 2h, Col5 leaf (71) P. syringae DC3000 avrRpm1, 4h, Col5 leaf (71) P. syringae DC3000, 4h, Col5 leaf (71) P. syringae hrpA, 4h, Col5 leaf (71) P. syringae DC3000, 12h, Col5 leaf (71) P. syringae hrpA, 12h, Col5 leaf (71) P. syringae DC3000, 2h, Col leaf (106) P. syringae DC3000, 6h, Col leaf (106) P. syringae DC3000, 24h, Col leaf (106) P. syringae avrRpm1, 2h, Col leaf (106) P. syringae avrRpm1, 6h, Col leaf (106) P. syringae avrRpm1, 24h, Col leaf (106) P. syringae HrcC, 2h, Col leaf (106) P. syringae HrcC, 6h, Col leaf (106) P. syringae HrcC, 24h, Col leaf (106) P. syringae pv. phaseolicola, 2h, Col leaf (106) P. syringae pv. phaseolicola, 6h, Col leaf (106) P. syringae pv. phaseolicola, 24h, Col leaf (106) P. syringae, resistant, 4h, Col leaf, uninfected half (148) P. syringae, resistant, 8h, Col leaf, uninfected half (148) P. syringae, resistant, 16h, Col leaf, uninfected half (148) P. syringae, resistant, 24h, Col leaf, uninfected half (148) P. syringae, resistant, 48h, Col leaf, uninfected half (148) P. syringae, susceptible, 4h, Col leaf, uninfected half (148) P. syringae, susceptible, 8h, Col leaf, uninfected half (148) P. syringae, susceptible, 16h, Col leaf, uninfected half (148) P. syringae, susceptible, 24h, Col leaf, uninfected half (148) P. syringae, susceptible, 48h, Col leaf, uninfected half (148) Erysiphe cichoracearum race UCSC, Col leaf (85) E. cichoracearum, 3h, Col leaf (86) E. cichoracearum, 10h, Col leaf (86) E. orontii, 6h, Col leaf (146) E. orontii, 12h, Col leaf (146) E. orontii, 18h, Col leaf (146) E. orontii, 24h, Col leaf (146) E. orontii, 48h, Col leaf (146) E. orontii, 72h, Col leaf (146) E. orontii, 96h, Col leaf (146) E. orontii, 120h, Col leaf (146) Botrytis cinerea, 18h, Col leaf (147) B. cinerea, 48h, Col leaf (147) Peronospora parasitica, resistant, 72h (72) P. parasitica, susceptible, 72h (72) Phytophtora infestans, 6h, Col seedling (108) P. infestans, 12h, Col seedling (108) P. infestans, 24h, Col seedling (108) elicitor flg22, Ler seedling (81) elicitor, control MgCl2, 1h, Col leaf (107) elicitor, control MgCl2, 4h, Col leaf (107) elicitor, GST, 1h, Col leaf (107) elicitor, GST, 4h, Col leaf (107) elicitor, hrpZ, 1h, Col leaf (107) elicitor, hrpZ, 4h, Col leaf (107) elicitor, GST NPP1, 1h, Col leaf (107) elicitor, GST NPP1, 4h, Col leaf (107) elicitor, flg22, 1h, Col leaf (107) elicitor, flg22, 4h, Col leaf (107) elicitor, LPS, 1h, Col leaf (107) elicitor, LPS, 4h, Col leaf (107) wounding, 15min, leaf (127) wounding, 30 min, leaf (127) wounding, 1h, leaf (127) wounding, 3h, leaf (127) wounding, 6h, leaf (127) wounding, 12h, leaf (127) wounding, 24h, leaf (127) wounding, 15min, root (127) wounding, 30 min, root (127) wounding, 1h, root (127) wounding, 3h, root (127) wounding, 6h, root (127) wounding, 12h, root (127) wounding, 24h, root (127) ozone, 1h, seedling (25) oxidative stress (paraquat), 30min, leaf (126) oxidative stress (paraquat), 1h, leaf (126) oxidative stress (paraquat), 3h, leaf (126) oxidative stress (paraquat), 6h, leaf (126) oxidative stress (paraquat), 12h, leaf (126) oxidative stress (paraquat), 24h, leaf (126) oxidative stress (paraquat), 30min, root (126) oxidative stress (paraquat), 1h, root (126) oxidative stress (paraquat), 3h, root (126) oxidative stress (paraquat), 6h, root (126) oxidative stress (paraquat), 12h, root (126) oxidative stress (paraquat), 24h, root (126) genotoxic stress (bleomycin), 30min, leaf (126) genotoxic stress (bleomycin), 1h, leaf (126) genotoxic stress (bleomycin), 3h, leaf (126) genotoxic stress (bleomycin), 6h, leaf (126) genotoxic stress (bleomycin), 12h, leaf (126) genotoxic stress (bleomycin), 24h, leaf (126) genotoxic stress (bleomycin), 30min, root (126) genotoxic stress (bleomycin), 1h, root (126) genotoxic stress (bleomycin), 3h, root (126) genotoxic stress (bleomycin), 6h, root (126) genotoxic stress (bleomycin), 12h, root (126) genotoxic stress (bleomycin), 24h, root (126) osmotic stress (mannitol), 30min, leaf (126) osmotic stress (mannitol), 1h, leaf (126) osmotic stress (mannitol), 3h, leaf (126) osmotic stress (mannitol), 6h, leaf (126) osmotic stress (mannitol), 12h, leaf (126) osmotic stress (mannitol), 24h, leaf (126) osmotic stress (mannitol), 30min, root (126) osmotic stress (mannitol), 1h, root (126) osmotic stress (mannitol), 3h, root (126) osmotic stress (mannitol), 6h, root (126) osmotic stress (mannitol), 12h, root (126) osmotic stress (mannitol), 24h, root (126) salt (NaCl), 30min, leaf (126) salt (NaCl), 1h, leaf (126) salt (NaCl), 3h, leaf (126) salt (NaCl), 6h, leaf (126) salt (NaCl), 12h, leaf (126) salt (NaCl), 24h, leaf (126) salt (NaCl), 30min, root (126) salt (NaCl), 1h, root (126) sal (NaCl), 3h, root (126) salt (NaCl), 6h, root (126) salt (NaCl), 12h, root (126) salt (NaCl), 24h, root (126) drought (excised leaves, laminar air flow), 2 h, leaf (58) drought (15 min dry air, then closed vessels ), 15min, leaf (126) drought (15 min dry air, then closed vessels ), 30min, leaf (126) drought (15 min dry air, then closed vessels ), 1h, leaf (126) drought (15 min dry air, then closed vessels ), 3h, leaf (126) drought (15 min dry air, then closed vessels ), 6h, leaf (126) drought (15 min dry air, then closed vessels ), 12h, leaf (126) drought (15 min dry air, then closed vessels ), 24h, leaf (126) drought (15 min dry air, then closed vessels ), 15min, root (126) drought (15 min dry air, then closed vessels ), 30min, root (126) drought (15 min dry air, then closed vessels ), 1h, root (126) drought (15 min dry air, then closed vessels ), 3h, root (126) drought (15 min dry air, then closed vessels ), 6h, root (126) drought (15 min dry air, then closed vessels ), 12h, root (126) drought (15 min dry air, then closed vessels ), 24h, root (126) freezing, recovery, 3h, leaf (58) freezing, recovery, 24h, leaf (58) cold (4°C), seedling (76) cold (4°C), 24h, (58) cold (4°C), 30min, leaf (126) cold (4°C), 1h, leaf (126) cold (4°C), 3h, leaf (126) cold (4°C), 6h, leaf (126) cold (4°C), 12h, leaf (126) cold (4°C), 24h, leaf (126) cold (4°C), 30min, root (126) cold (4°C), 1h, root (126) cold (4°C), 3h, root (126) cold (4°C), 6h, root (126) cold (4°C), 12h, root (126) cold (4°C), 24h, root (126) heat (30°C), 1h, seedling (59) heat (40°C), 1h, seedling (59) heat (55°C), 10min, 1h recovery, suspension cell (26) heat (38°C), 15min, leaf (126) heat (38°C), 30min, leaf (126) heat (38°C), 1h, leaf (126) heat (38°C), 3h, leaf (126) heat (38°C), 3h, 1h recovery, leaf (126) heat (38°C), 3h, 3h recovery, leaf (126) heat (38°C), 3h, 9h recovery, leaf (126) heat (38°C), 3h, 21h recovery, leaf (126) heat (38°C), 15min, root (126) heat (38°C), 30min, root (126) heat (38°C), 1h, root (126) heat (38°C), 3h, root (126) heat (38°C), 3h, 1h recovery, root (126) heat (38°C), 3h, 3h recovery, root (126) heat (38°C), 3h, 9h recovery, root (126) heat (38°C), 3h, 21h recovery, root (126) heat (38°C), 15min, suspension cell (126) heat (38°C), 30min, suspension cell (126) heat (38°C), 1h, suspension cell (126) heat (38°C), 3h, suspension cell (126) heat (38°C), 3h, 1h recovery, suspension cell (126) heat (38°C), 3h, 3h recovery, suspension cell (126) heat (38°C), 3h, 9h recovery, suspension cell (126) heat (38°C), 3h, 21h recovery, suspension cell (126) UV-B, 15min, leaf (126) UV-B, 30min, leaf (126) UV-B, 1h, leaf (126) UV-B, 3h, leaf (126) UV-B, 6h, leaf (126) UV-B, 12h, leaf (126) UV-B, 24h, leaf (126) UV-B, 15min, root (126) UV-B, 30min, root (126) UV-B, 1h, root (126) UV-B, 3h, root (126) UV-B, 6h, root (126) UV-B, 12h, root (126) UV-B, 24h, root (126) high light, leaf (95) low light, leaf (95) low light, 3h, petiole (13) Cs, 7d, leaf (97) bleomycin, 3d, whole plant (57) Norfluazone, whole seedling (98) Zn, whole rosette, A. halleri (101) Zn, whole roots, A_halleri (101) Zn, whole rosette, A. petrea (101) Zn, whole roots, A. petrea (101) zearalenone (c2t), 14d, seedlings (103) zearalenone (c4t), 14d, seedlings (103) Cs, 7d, root (97) t-zeatin, seedling (115) fumomisin, protoplast (62) syringolin, 10h, leaf (86) isoxaben, suspension cell (10) Locus Probeset Name Description Annotation score GO.keywords FunCat keywords AraCyc annotations KEGG annotations BioPath annotations AcylLipid category Literature annotations Gene family 90% quantile of DE max. DE
At3g14650 1.000 CYP72A11 cytochrome P450 family protein -0.66 0.04 0.05 0.88 -0.56 -1.14 -0.59 -0.61 -1.22 -0.97 0.09 0.13 -1.23 -0.23 -0.83 -1.14 -0.26 -0.25 -0.76 -0.31 -1.12 -1.01 0.25 -0.33 -0.67 -0.19 0.02 0.32 -0.2 -0.67 -0.59 -0.18 0 0.11 -0.93 0.34 0.16 0.22 0.12 0.34 -0.15 -0.12 -0.05 -0.27 -1.03 0.06 -0.94 -0.92 -0.3 -0.3 -0.23 0.34 0.24 -0.09 0.05 -0.37 -1.09 -0.07 -0.94 -0.26 -0.56 0.41 0.07 -0.13 -0.36 -0.02 -0.01 0.06 0.09 0 0.4 0.14 0.44 0.31 0.49 0.42 0.52 -0.88 -0.26 0.39 0.4 0.28 0.2 -0.08 0.38 0.61 0.05 0.39 0.03 0.42 -0.36 0.21 0.44 0.28 0.25 -0.25 0.33 0.34 0.25 0.21 0.06 0.52 -0.16 0.25 -0.09 0.01 -0.18 -0.14 -0.03 0.27 0.23 0.64 0.5 0.86 0.16 0.3 -0.01 -0.16 -0.1 -0.5 0.07 0.54 -0.03 -0.92 0.05 0.55 0.07 0.33 -0.05 0.24 0.35 0.14 0.05 -0.17 0.26 -0.49 -0.15 0.47 0.35 -0.05 0.24 -0.65 -0.28 0.4 0.31 0.34 -0.07 0.25 0.16 0.05 -0.81 0.49 1.05 0.39 0.6 -0.02 0.6 -1.06 -0.47 -1.28 0.6 0.06 -0.66 -0.56 0.71 0.44 0.93 0.23 0.67 0.22 -0.35 -0.45 0.67 0.85 0.63 0.62 0.18 0.18 0.18 0.27 -0.04 0.18 0.3 0.11 -0.23 0.51 0.47 0.39 0.51 0.42 0.33 0.31 0.36 0.1 -0.34 -0.88 -0.04 -0.24 -0.11 -0.05 -0.3 0.27 -0.86 -0.14 1.66 -1.95 -1.41 2.66 0.43 0.05 1.17 0.31 0.41 -2.08 2.22 At3g14650 258113_at CYP72A11 cytochrome P450 family protein 1






cytochrome P450 family 1.71 4.74
At4g37330 0.668 CYP81D40 cytochrome P450 family protein 0.24 NA 0.17 -0.63 0.06 -0.54 -0.55 -0.39 -0.48 -0.71 -0.07 0.13 0.26 0.43 -0.72 -0.23 -0.03 -0.18 -0.76 -0.12 -0.68 -0.78 0.01 -0.12 -0.62 -0.32 0.14 -0.13 -0.11 -0.61 -0.9 -0.23 0.18 0.28 -0.83 0.55 0.33 0.46 0.17 0.24 -0.06 -0.17 -0.31 -0.22 -1.12 0.22 -0.85 -0.54 -0.43 -0.21 0.12 0.09 0.01 -0.07 0.03 0.16 -0.56 -0.09 -0.75 -0.07 -0.57 0.22 -0.22 -0.08 -0.28 -0.45 0.15 0.11 0.2 -0.19 0.47 0.38 0.73 0.56 0.65 0.84 0.78 -0.52 -0.09 0.22 0.45 0.53 0.3 -0.27 0.11 0.67 0.24 0.4 0.39 0.41 0.25 0.39 0.55 0.55 0.1 -0.14 0.12 0.68 0.4 -0.09 0.28 0.17 -0.01 0.21 -0.57 0.05 -0.28 -0.23 0.02 0.57 0.67 0.46 0.81 0.69 0.12 0.31 -0.01 -0.05 -0.52 -0.48 -0.22 0.45 0.37 0.13 0.71 0.74 0.59 0.28 -0.09 0.22 0.48 0.38 0.11 -0.3 -0.22 -0.2 0.53 0.54 0.27 0.24 0.07 -0.72 0.44 -0.16 -0.47 0.42 0.27 0.36 0.33 -1.04 -1.68 -0.06 0.4 -0.06 0 0.09 0.48 -0.71 -0.86 -0.27 0.3 -0.05 -0.13 -0.35 0.4 0.47 0.31 -0.11 0.24 0.05 0.27 0.39 0.42 -0.26 0.51 0.23 0 -0.15 -0.59 -1.19 -0.81 -0.59 0.08 0.24 0.09 -0.09 0.82 0.23 0.15 0.17 0.25 0.21 0.3 0.01 -0.39 -0.72 -0.41 -0.27 -0.04 0.4 0.39 -0.12 -0.54 -0.5 1.01 -0.68 -0.46 0.86 0.12 -0.35 0.09 -0.28 -0.17 -2.04 1.19 At4g37330 253096_at CYP81D40 cytochrome P450 family protein 1
biosynthesis of secondary products derived from L-phenylalanine and L-tyrosine | biosynthesis of phenylpropanoids




cytochrome P450 family 1.45 3.23
At2g36990 0.641 SIGF RNA polymerase sigma subunit SigF (sigF) / sigma-like factor (SIG6) -0.9 0.05 0.26 -0.28 -0.14 -0.42 -0.37 -0.46 -1.78 -1.03 -0.44 -0.18 -2.65 -0.03 -1.19 -1.05 -0.54 -0.09 -0.6 -0.49 -1.04 -0.74 0.15 -0.27 -0.56 -0.07 0.28 0.51 -0.07 -0.5 -0.42 0.03 0.15 -0.1 -0.9 0.4 0.39 0.34 0.18 0.31 0.37 0.53 -0.02 -0.26 -1.15 0.28 -0.26 -0.97 -0.17 -0.15 -0.02 0.33 0.13 0.14 -0.08 0.16 -1.14 0.3 -1.06 -0.01 -0.73 0.44 -0.01 0.71 0.01 -0.28 -0.22 0.26 0.33 0.26 0.17 0.2 -0.39 0.11 0.04 0.2 0.72 -1.18 0.22 0.25 0.22 0.19 0.26 0.07 0.13 -0.16 0.3 0.24 0.16 0.43 0.26 0.39 0.33 0.28 0.23 0 0.17 -0.02 0.12 0.36 0.25 0.53 0.24 0.44 -0.57 -0.59 -0.83 -1.07 0.47 0.02 0.03 0.41 0.83 0.02 0.28 0.28 -0.07 -0.23 -0.02 -0.31 0.53 0.21 -0.23 -0.23 0.21 0.22 -0.16 0.75 -0.06 0.22 -0.14 0.22 0.21 -0.08 0.35 0.24 -0.14 0.36 0.24 0.28 0.15 -0.42 -1.06 0.22 -0.16 0.15 0.22 0.21 0.17 -0.03 -0.35 0.56 0.28 0.63 0.5 0.35 0.28 -0.74 -0.05 0.26 0.64 -0.06 -0.1 0.23 0.35 0.3 0.18 0.14 0.19 0.37 -0.13 0.01 0.25 0.51 0.43 0.21 -0.05 0.17 0.15 0.08 0.33 -0.02 0.53 0.2 0.23 0.76 -0.06 0.85 0.25 0.53 0.61 0.71 0.2 0.3 -0.19 -0.69 0.1 0.05 -0.28 -0.08 0.28 0.16 -0.9 -0.05 -2 0 -0.88 1.48 0.95 0 0.26 0.71 -0.21 -1.51 1.35 At2g36990 263846_at SIGF RNA polymerase sigma subunit SigF (sigF) / sigma-like factor (SIG6) 6 transcription initiation


Transcription (chloroplast)


1.72 4.12
At2g26080 0.639
glycine dehydrogenase (decarboxylating), putative / glycine decarboxylase, putative / glycine cleavage system P-protein, putative, strong similarity to Glycine dehydrogenase (decarboxylating) from Pisum sativum -1.06 0.41 0.21 0.64 -0.22 -0.84 -0.78 -0.64 -1.53 -0.69 -0.2 -0.07 -0.74 -0.44 -1.05 -0.65 -0.05 -0.01 -0.18 -0.19 -0.65 -0.26 -0.08 -0.21 -0.28 -0.06 0.09 0.1 -0.05 -0.25 -0.27 -0.08 -0.11 -0.1 -0.86 0.28 0.13 0.11 0.22 0.28 -0.3 -0.26 -0.09 -0.28 -1.51 0.07 -1.3 -0.72 -0.15 -0.59 0.07 0.56 0.23 0.28 0.28 -0.17 -0.95 -0.11 -0.85 -0.11 -0.59 0.34 0.02 -0.03 -0.12 -0.06 -0.16 -0.06 0.08 0.28 0.38 0.28 -0.02 0.23 0.15 0.26 0.16 -0.7 0.23 0.41 0.67 0.8 0.45 0.24 0.47 0.21 0.34 0.04 0.23 -0.04 0.35 0.45 0.77 0.87 0.28 0.26 0.14 0.07 0.27 0.18 -0.03 0.05 0.27 0.18 0.09 0.12 -1.02 -0.25 0.46 0.05 -0.15 -0.24 -0.19 0.01 0.43 0.44 0.06 0.31 -0.53 -0.14 0.35 0.11 -0.3 -0.92 -0.6 -0.39 -0.04 0.76 0.56 0.74 0.5 0.61 0.09 0.2 0.28 0.54 0.28 0.32 0.32 0.37 0.32 -0.39 -0.49 0.48 0.05 0.49 0.65 1.17 1.9 -0.06 -1.46 0.2 0.11 0.46 0.09 0.09 -0.32 -0.51 0.07 0.05 0.38 0.07 -0.28 -1.22 -1.25 0.32 0.55 0.37 0.52 0.28 -0.02 -0.59 -0.11 0.42 0.44 0.38 0.38 0.26 0.16 -0.35 -0.26 -0.18 -0.18 -0.11 0.12 0.11 0.05 0.39 0.11 0.2 0.1 0.06 0.23 0.33 0.49 0.15 -0.44 0.11 -0.51 -0.06 0.27 0.28 -1.09 -0.47 -0.08 -0.59 -0.77 1.9 0.2 -0.1 0.33 0.4 0.27 -1.07 0.44 At2g26080 266892_at
glycine dehydrogenase (decarboxylating), putative / glycine decarboxylase, putative / glycine cleavage system P-protein, putative, strong similarity to Glycine dehydrogenase (decarboxylating) from Pisum sativum 4

glycine degradation I Glycine, serine and threonine metabolism



1.59 3.44
At4g02510 0.618 TOC159 An integral membrane GTPase, functioning as a transit-sequence receptor for protein import into chloroplasts and is essential for the biogenesis of chloroplasts. Located in the outer chloroplast membrane. -0.72 0.27 0.25 0.43 0.08 -0.84 -0.37 -0.37 -1.04 -0.56 -0.26 -0.05 -1.12 -0.28 -0.89 -0.55 -0.35 -0.1 -0.3 -0.28 -0.7 -0.4 0.12 -0.05 -0.33 0.03 0.28 0.28 0.06 -0.25 -0.02 0.26 0.21 -0.11 -0.25 0.33 0.11 0.24 0.08 0.11 0.05 0.4 0.34 -0.01 -0.63 0.03 -1.12 -0.7 -0.16 -0.07 0.04 0.21 -0.17 0.08 -0.38 -0.11 -1.11 -0.03 -1.13 -0.03 -0.93 -0.05 -0.27 0.46 0.38 0.13 0.08 0.38 0.39 0.17 0.46 0.3 0.16 0.21 0.35 0.12 0.22 -0.75 0.2 0.21 0.13 0.01 0.06 -0.15 0.21 0.27 0.23 0.22 -0.01 0.16 0.2 0.25 0.23 0.17 0.12 -0.03 0.28 0.32 0.31 0.09 0.02 0.14 0.16 0.36 -0.7 -0.5 -0.87 -0.6 0.1 -0.02 0.05 0.07 0.16 0.24 -0.01 0.25 -0.25 -0.56 -0.61 -0.49 0.18 0.09 -0.25 -0.85 -0.26 -0.19 -0.3 0.53 -0.1 -0.01 -0.05 -0.05 -0.11 -0.08 0.42 0.2 0.07 -0.03 0.12 -0.03 0.09 -0.61 -0.5 0.21 0.35 0.04 0.22 0.28 0.23 -0.14 -0.15 0.17 0.16 0.17 -0.14 -0.03 0.32 -0.87 -0.5 -0.28 0.21 0.18 -0.11 0.09 0.57 0.28 0.13 0.03 0.14 0.35 -0.06 -0.13 0.33 0.49 0.11 0.15 0.24 0.16 -0.03 0.38 0.51 0.52 0.49 0.18 0.16 0.2 0.2 0.65 0.42 0.28 0.18 0.52 0.16 0.11 0.28 -0.09 0.2 0.26 -0.04 -0.39 -0.17 0.49 -0.59 0.43 -1.78 0.32 -0.26 2.25 0.38 -0.3 0.13 0.54 0.15 -0.38 1.48 At4g02510 255482_at TOC159 An integral membrane GTPase, functioning as a transit-sequence receptor for protein import into chloroplasts and is essential for the biogenesis of chloroplasts. Located in the outer chloroplast membrane. 9 transmembrane receptor activity | protein-chloroplast targeting protein targeting, sorting and translocation | transport routes | chloroplast transport

Chloroplastic protein import via envelope membrane | Toc apparatus


1.33 4.04
At3g10230 0.616 LYC Encodes lycopene cyclase which catalyzes the formation of beta rings in lycopene. -0.62 0.39 0.35 0.31 -0.41 -0.77 -0.16 -0.3 -0.69 -0.65 -0.42 -0.04 -0.52 -0.34 -0.72 -0.66 -0.37 -0.07 -0.39 -0.48 -0.69 -0.56 0.05 -0.26 -0.4 -0.12 0.12 0.11 -0.14 -0.48 -0.28 0.15 -0.23 -0.08 -0.48 0.34 0.25 0.14 0.21 0.24 -0.07 -0.05 -0.18 -0.2 -1 0.18 -0.87 -0.83 0.02 -0.31 0.19 0.36 0.18 0.07 0.04 -0.06 -0.72 -0.17 -0.66 -0.13 -0.47 0.26 0.08 -0.08 -0.01 -0.23 0.18 -0.06 0.07 0.19 0.63 0.28 0.36 0.52 0.34 0.54 0.34 -0.67 -0.04 0.26 0.19 0.28 0.03 -0.22 0.11 0.13 0.45 0.22 0.13 0.28 0.18 0.22 0.34 0.53 0.04 0.01 0.12 0.33 0.35 0 0.15 0.18 -0.05 0.01 -0.33 -0.03 -0.81 -0.98 0.03 -0.02 0.09 0 0.53 0.21 0.16 0.28 0.08 0.06 -0.63 -0.69 0.24 0.15 -0.2 -0.57 0.02 -0.3 0.34 0.45 0.01 0.22 0.13 0.47 0.19 -0.04 0.27 -0.12 -0.18 0.32 0.26 0.33 0 -0.7 -0.44 0.23 0.12 0.35 0.43 0.47 0.79 0.34 -1.04 0.35 0.52 0.5 0.51 0.45 -0.61 -0.91 0.1 0.03 0.35 0.07 -0.08 -0.33 0.21 0.27 0.51 0.03 0.34 0.27 0.43 0.23 0.28 -0.07 0.68 0.2 0.25 0.37 0.21 -0.82 -0.5 -0.34 0.14 0.11 0.56 0.17 0.27 0.52 0.31 0.4 0.37 0.31 0.1 0.31 -0.13 -0.19 -0.31 -0.17 -0.54 0.24 0.22 -0.04 -0.56 -0.45 -0.67 0.66 0.16 0.98 0.32 0.23 -0.22 0.11 0.17 -1.46 0.51 At3g10230 259140_at LYC Encodes lycopene cyclase which catalyzes the formation of beta rings in lycopene. 10 carotene biosynthesis | lycopene beta cyclase activity
carotenoid biosynthesis Biosynthesis of steroids Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Carotenoid biosynthesis
Carotenoid and abscisic acid metabolism | carotenid biosynthesis
1.24 2.44
At5g42310 0.602
pentatricopeptide (PPR) repeat-containing protein -1.14 0.23 0.08 0.57 -0.39 -0.91 -0.24 -0.28 -2 -1.01 -0.44 -0.31 -1.38 -0.1 -1.1 -1.14 -0.17 -0.15 -0.43 -0.37 -0.92 -0.73 0.05 -0.34 -0.49 0.16 0.15 0.05 -0.15 -0.45 -0.19 0.15 0.06 -0.18 -0.87 0.39 0.17 0.19 0.04 0.2 0.11 0.01 -0.07 -0.55 -1.19 -0.03 0.16 -0.97 -0.11 -0.06 0 0.54 0.07 0.27 -0.13 0.06 -0.94 -0.06 -0.96 -0.09 -0.88 0.4 -0.19 -0.06 -0.04 -0.45 0.13 -0.07 -0.27 -0.2 0.03 0.07 0.08 0.03 0.47 0.45 0.32 -1.24 -0.04 0.07 -0.08 -0.08 -0.25 -0.57 0.2 -0.33 0.27 0.68 0.36 0.01 -0.05 -0.07 0.2 0.14 -0.11 -0.18 0.01 -0.21 0.15 0.48 -0.01 -0.1 0.05 0.21 -0.23 -0.09 -0.63 -0.74 0.39 0.38 0.23 1.09 0.88 0.78 0.27 0.38 0.06 -0.05 -0.51 -0.8 0.75 0.62 -0.12 0.32 0.33 -0.04 0.08 0.33 -0.16 -0.01 -0.13 0.12 -0.14 -0.24 0.59 -0.01 -0.13 -0.02 0.67 0.39 -0.03 -0.59 -0.72 0.35 0.4 0.39 0.39 0.37 0.49 0.1 -0.31 0.33 0.53 0.57 0.93 0.85 1.12 -0.82 0.26 0.01 0.43 0.07 -0.53 -0.11 0.32 0.49 0.48 0.2 0.53 0.49 -0.05 0.96 0.47 0.77 0.75 0.48 0.62 0.62 0.71 0.04 0.04 -0.95 0.52 0.28 -0.12 0.33 0 0.61 0.5 0.44 0.32 0.26 0.13 -0.06 -0.26 -0.57 -0.41 -0.18 -0.43 0.1 0 0.21 -0.2 -0.64 -1.28 0.82 0.65 0.98 0.08 0.53 0.27 0.17 -0.08 -1.82 0.86 At5g42310 249247_at
pentatricopeptide (PPR) repeat-containing protein 2



mRNA processing in chloroplast


1.71 3.13
At1g48030 0.592
dihydrolipoamide dehydrogenase 1, mitochondrial / lipoamide dehydrogenase 1 (MTLPD1) -0.44 0.23 0.1 0.56 0.06 -0.19 -0.23 -0.04 -1.02 -0.65 -0.19 -0.18 -1.33 -0.21 -0.25 -0.66 0.03 0.12 -0.39 -0.13 -0.33 -0.71 0.06 -0.11 -0.22 -0.09 0.05 -0.12 0.01 -0.3 -0.27 -0.01 0.22 0.01 -0.31 0.16 0.17 0.16 0.07 0.2 0.05 0.06 -0.18 -0.04 -0.66 0.12 -0.67 -0.55 -0.31 -0.38 -0.03 0.32 -0.12 0.19 -0.37 0.17 -0.73 0.17 -0.76 0.22 -0.56 0.39 -0.16 -0.2 -0.05 -0.14 -0.01 -0.07 -0.01 0.05 0.11 0.04 -0.09 -0.09 0 0.01 0 -0.41 0.1 0.23 0.56 0.36 0.21 0.21 0.22 0.11 0.12 -0.09 0.14 0.05 0.28 0.2 0.39 0.36 0.21 0.1 0.01 -0.01 0.11 0.19 0.01 0.15 0.15 0.11 -0.1 0.01 -0.75 -0.76 0.06 0.07 0.2 0.37 0.28 0.27 0.31 0.41 0.35 0.24 -0.3 -0.37 0.06 0.01 -0.19 -0.24 0.23 0.15 -0.06 0.28 0.25 0.36 0.43 0.24 -0.03 0.26 0.11 0.14 -0.03 0.14 0.26 0.24 0.28 -0.01 0.1 0.14 -0.45 0.57 0.56 0.31 0.24 -0.34 -0.33 0.21 0.03 0.14 -0.03 -0.07 -0.01 -0.23 0.3 0.12 0.36 0.3 0.15 -0.45 -0.11 0.2 0.23 0.2 0.27 0.01 -0.08 -0.46 0 0.26 0.28 0.31 0.11 -0.04 -0.25 -0.35 -0.23 -0.07 0.28 0.09 0.09 -0.01 -0.04 -0.03 0.11 0.09 0.12 0.19 0.21 0.23 -0.09 -0.39 -0.24 0.07 0.07 -0.24 -0.09 0.08 0.42 -0.52 -0.26 0.14 0.16 0.99 0.28 -0.19 0.44 -0.31 0.26 -0.94 0.31 At1g48030 260730_at
dihydrolipoamide dehydrogenase 1, mitochondrial / lipoamide dehydrogenase 1 (MTLPD1) 10 response to light C-compound and carbohydrate metabolism | tricarboxylic-acid pathway (citrate cycle, Krebs cycle, TCA cycle)
Glycolysis / Gluconeogenesis | Citrate cycle (TCA cycle) | Pyruvate metabolism | Glycine, serine and threonine metabolism Intermediary Carbon Metabolism metabolism of acyl-lipids in mitochondria

1.03 2.32
At1g14700 0.591
Similar to purple acid phosphatase from Arabidopsis thaliana -0.3 -0.13 0.15 0.15 -0.02 -0.54 -0.14 -0.19 -1.63 -1.32 -0.28 -0.42 -2.38 0.16 -1.43 -1.47 -0.43 -0.63 -1.33 -0.41 -1.17 -1.29 -0.13 -0.68 -1.12 -0.46 -0.07 -0.04 -0.32 -0.94 -1.33 -0.68 -0.44 0.08 -0.55 0.61 0.54 0.91 0.31 0.22 0.51 0.59 0.1 -0.46 -1.39 0.15 -0.36 -1.18 -0.67 -0.95 -0.03 0.2 -0.14 -0.05 -0.75 0.01 -1.55 -0.08 -1.17 0.34 -1.26 0.36 -0.24 -0.12 -0.25 -0.63 -0.08 -0.19 -0.17 -0.45 0.72 0.27 0.51 0.38 1.24 0.63 0.64 -1.42 0.25 -0.1 0.5 0.33 0.24 -0.26 0.41 0.54 0.22 0.32 0.51 1.01 0.19 0.35 0.64 0.34 -0.04 -0.41 0.81 1.12 0.48 1.18 1.05 0.75 0.04 0.26 -0.95 -0.37 -0.96 -1.77 0.32 0.35 0.25 1.27 1.49 1.08 0.4 0.23 0.06 -0.43 -0.56 -0.82 0.26 0.07 -0.06 0.53 1.44 0.47 0.07 0.34 0.03 0.47 0.37 0.3 0.12 -0.15 0.23 0.26 0.46 0.07 0.57 0.32 0.05 -0.74 1.75 0.03 -2.52 0.65 0.77 0.2 0.3 -0.89 -2.85 0.52 0.88 0.42 0.98 0.45 0.47 -1.27 0.46 0.3 0.6 0.28 0.53 -0.18 0.97 0.08 0.27 0.05 1.14 0.96 0.6 0.34 0.48 1.42 1.1 0.81 0.24 0.24 0.24 0.24 0.24 0.24 0.24 0.46 0.24 0.87 0.76 -0.09 0.66 0.95 0.38 0.39 -0.11 0.26 -0.93 -1.3 -0.19 -0.49 -0.43 0.55 0.3 -0.45 -1.44 -1.8 -1.19 0.57 -0.36 0.52 0.42 0.2 0.2 0.44 0.11 -2.4 1.32 At1g14700 262830_at
Similar to purple acid phosphatase from Arabidopsis thaliana 4


Riboflavin metabolism | gamma-Hexachlorocyclohexane degradation



2.51 4.60
At2g04270 0.590
glycoside hydrolase starch-binding domain-containing protein -0.74 0.26 0.21 0.21 -0.26 0.21 0.38 0.21 -0.99 -0.83 -0.74 0.21 -2.25 -0.71 -1.1 -1.78 -0.41 -0.02 -0.93 -0.69 -0.52 -1.15 0.23 -0.65 -0.79 -0.49 0.46 0.33 -0.36 -0.85 -1.18 0.26 0.28 0.08 -0.21 0.23 0.06 0.19 -0.27 0.17 0.46 0.12 -0.09 -0.32 -1.09 0.12 -0.53 -1.26 -0.19 -0.4 -0.27 0.21 -0.13 -0.06 -0.69 0.15 -1.44 0.59 -1.29 0.42 -0.9 0.8 -0.07 0.28 0.28 -0.64 -0.42 -0.01 0.04 -0.02 0.1 0.52 0.33 0.21 0.17 0.37 0.22 -1.11 0.51 0.23 0.56 0.82 0.68 0.26 0.28 0.06 0.21 0.21 -0.19 0.21 0.78 0.8 0.71 0.69 0.66 -0.02 0.1 -0.03 0.07 0.42 -0.15 0.21 0.28 0.21 -1.05 -0.24 -0.51 -0.48 0.21 0.09 0.21 0.15 0.32 0.54 0.43 0.25 -0.55 -0.91 -0.74 -1.31 0.48 0.09 0.21 0.15 -0.19 0.21 -0.16 0.1 0.47 0.24 0.4 0.48 -0.04 -0.02 0.2 0.21 0.3 0.24 0.15 0.06 0.39 -0.83 -0.47 0.56 0.19 0.31 0.06 0.17 0.71 0.07 -0.34 0.21 0.09 0.21 0.15 -0.19 0.21 -0.41 0.43 0.33 0.28 0.48 -0.15 -0.18 0.75 0.62 0.46 0.12 0.38 0.38 0.17 0.36 0.74 0.81 0.23 0.25 0.21 0.21 0.21 0.16 0.68 0.21 0.54 0.07 -0.32 -0.11 -0.2 0.7 0.14 -0.19 0.21 0.19 -0.08 -0.25 -0.52 -0.6 0.33 0.02 -0.28 -0.06 0.14 0.37 -1.33 0.4 -0.65 0.4 -0.18 1.1 0.3 -0.23 0.21 0.66 -0.06 -0.53 1.56 At2g04270 263322_at
glycoside hydrolase starch-binding domain-containing protein 2


Aminosugars metabolism



1.79 3.80
At1g31230 0.587
bifunctional aspartate kinase/homoserine dehydrogenase 0.23 0.43 0.27 1.81 0.07 0.33 0.33 0.33 -1.48 -1.15 -0.83 -0.13 -3.12 -0.97 -1.2 -0.65 -0.9 -0.22 -0.17 -0.77 -0.92 -0.86 0.14 -0.38 -0.14 -0.01 0.04 0.45 -0.04 0.25 -0.12 0.11 0.59 0.09 -0.65 -0.37 -0.43 -0.08 -0.01 -0.09 -0.54 -0.32 -0.34 0.51 -0.54 0.47 0.41 -1 -0.47 0.48 0.12 0.49 -0.22 0.1 -0.35 0.14 -1.57 0.27 -1.49 -0.2 -1.02 0.28 -0.28 0.46 0.46 0.21 0.41 0.34 0.05 0.52 0.05 0.34 0.28 0.19 0.03 0.56 0.51 -0.67 0.74 0.52 0.43 0.07 0.28 0.32 0.34 0.41 0.07 0.39 0.23 0.12 0.18 0.13 0.36 -0.01 0.16 0.27 0.34 0.24 0.01 -0.4 0.14 0.31 0.32 0.17 0.09 -0.08 0.26 -0.27 0.08 0.1 -0.23 -0.48 -0.97 -0.46 0.43 0.04 0.32 0.08 0.79 0.39 0.03 0 -0.53 -0.61 -0.84 -0.56 0.08 0.75 0.46 0.27 0.52 0.75 0.3 0.25 0.28 0.31 0.07 0.17 0.1 0.5 0.38 -0.11 -1.06 1.14 0.84 0.66 0.12 0.2 0.04 -0.33 -1.11 0.26 0.04 0 -0.08 -0.2 -0.34 -1.71 1.15 0.13 0.84 0.38 -0.36 -1.01 0.06 -0.11 0.56 0.68 0.33 0.36 -0.16 -1.2 -0.96 0.27 0.33 0.75 0.36 0.2 -0.18 -0.56 -0.33 -0.04 0.46 0.27 0.22 0.11 0.11 0.01 0.41 0.38 0.14 0.55 0.47 -0.19 -0.34 -0.68 0.53 -0.34 0.36 0.19 -0.64 0.65 -0.19 0.21 -0.88 -0.85 -1.44 3.44 0.15 0.26 -0.24 0.77 0.12 -2.75 1.53 At1g31230 263696_at
bifunctional aspartate kinase/homoserine dehydrogenase 4 aspartate family amino acid biosynthesis
lysine biosynthesis I | homoserine biosynthesis Glycine, serine and threonine metabolism | Lysine biosynthesis



1.82 6.56
At2g30150 0.587
UDP-glucoronosyl/UDP-glucosyl transferase family protein 2.02 -0.21 -0.01 0.14 0.14 -0.33 -0.33 -0.33 -1.05 -1.01 0.44 0.26 -1.35 0.33 -0.41 -0.57 0.01 0.01 -1.07 -0.39 -0.67 -1.04 -0.24 -0.37 -0.5 -0.63 -0.16 -0.13 -0.01 -0.44 -0.73 -0.38 0.03 -0.43 -1.03 0.09 0.02 0.11 -0.04 0.04 0 -0.22 -0.5 -0.28 -1.51 -0.01 -0.96 -1.06 -0.63 -0.59 -0.32 0.06 -0.19 -0.04 -0.41 0.09 -1.2 -0.1 -0.98 -0.09 -0.95 0.06 -0.18 0.42 -0.49 -0.73 -0.17 0.03 0.05 -0.07 0.9 0.08 0.32 0.19 0.24 0.16 0.07 -0.83 0.14 0.13 0.37 0.45 0.27 -0.15 0.22 0.39 0.88 0.07 -0.12 0.51 0.24 0.25 0.62 0.57 0.17 -0.44 0.48 0.23 0.92 0.27 0.41 0.28 -0.07 0.18 -0.43 -0.39 -1.13 -1.36 0.16 0.39 1.4 0.71 0.68 0.87 0.24 0.18 0.14 0.19 -0.09 -0.39 0.16 0.3 0.89 0.52 0.56 0.56 0.26 0.75 0.2 0.6 0.42 0.65 0.31 -0.53 0.52 0.37 0.39 0.85 0.85 0.74 0.18 -0.71 -1.39 0.42 0.9 0.5 0.13 0.71 0.55 -1.3 -1.8 0.14 0.3 0.25 0.14 -0.11 -0.04 -1.48 -0.56 -0.01 0.5 -0.34 -0.84 -0.02 0.48 0.26 0.09 -0.16 1.12 0.28 0.28 0.3 0.41 0.49 0.78 0.12 -0.42 -0.04 -0.12 -0.07 0.2 -0.67 0.26 0.08 0.65 0.84 1.12 1.57 0.15 0.57 0.09 0.41 0.47 0.62 0.51 -0.2 -0.31 -0.52 -0.04 0.19 -0.69 0.01 -1.37 0.65 0.14 -0.8 0.14 0.14 -0.03 0.44 -0.12 0.45 -0.15 -3.03 0.56 At2g30150 267299_at
UDP-glucoronosyl/UDP-glucosyl transferase family protein 1






Glycosyl transferase, Family 1 1.95 5.05
At5g02120 0.581 OHP Encodes a one helix protein homologous to cyanobacterial high-light inducible proteins. The protein is localized to the thylakoid membrane and its transcript is transiently induced by exposure to high light conditions. -2.42 0.38 0.27 3.12 -0.43 -0.95 -0.42 -1.21 -1.75 -0.9 -0.61 0.07 -1.58 -0.43 -0.99 -1.57 -0.13 -0.19 -0.95 -0.33 -0.65 -1.26 0.05 -0.08 -0.78 -0.24 0.25 0.21 -0.06 -0.59 -0.57 0.16 -0.26 0.14 -0.56 0.4 0.47 0.43 0.17 0.16 0.16 0.07 -0.54 -0.48 -1.94 0.01 -0.2 -0.87 -0.5 -0.73 0.13 0.45 0.23 0.25 -0.07 0.01 -1.07 0.17 -0.95 0.02 -0.74 0.41 0.03 0.05 -0.1 -0.09 0.21 -0.14 0.02 -0.07 0.23 0.52 0.34 -0.09 0.27 0.27 0.15 -1.01 0.07 0.24 0.24 0.2 0.1 -0.07 0.01 0.19 0.3 -0.08 -0.14 0.41 -0.17 0.07 0.37 0.41 -0.07 0.08 0.33 -0.08 0.19 -0.25 -0.44 0.08 -0.03 0.01 -0.06 -0.14 -1.18 -1.31 0.56 0.34 0.01 0.06 0.56 0.82 0.08 0.28 0.33 -0.15 -0.74 -0.78 0.66 0.34 0.27 0.27 0.28 0.56 0.47 0.46 -0.12 0.02 -0.01 0.16 0.05 0.03 0.24 0.56 0.34 0.37 0.11 0.27 0.03 -0.27 -0.21 0.07 -0.38 0.32 0.28 0.44 0.75 0.15 -0.87 0.4 0.8 0.7 0.27 0.27 0.14 -0.39 0.2 0.27 0.75 0.18 0.44 0.03 0.02 0.54 0.72 0.53 0.31 0.26 -0.01 0.27 0.15 0.27 0.13 0.32 0.27 0.27 0.27 0.27 0.27 0.27 0.27 0.27 0.33 0.78 0.96 0.24 0.14 -0.25 0.32 0.59 0.16 0.16 0.05 -0.89 -0.06 0.23 -0.82 0.17 0.31 -0.48 -0.71 -0.86 0.27 0.89 0.27 0.57 0.43 0.62 0.27 -0.14 -0.25 -0.77 0.64 At5g02120 251031_at OHP Encodes a one helix protein homologous to cyanobacterial high-light inducible proteins. The protein is localized to the thylakoid membrane and its transcript is transiently induced by exposure to high light conditions. 8 response to high light intensity photosynthesis | biogenesis of chloroplast

Photosystems | additional photosystem II components | Early light-inducible proteins


1.64 5.54
At1g03310 0.573
Encodes a protein with strong similarity to isoamylase (EC:3.2.1.68) however lacks critical residues known to be important for activity. Appears to co localize with ISA1 in the chloroplast isoamylase complex. -1.24 0.13 -0.12 1.05 -0.79 -0.83 -0.83 -0.83 -2.24 -1.3 -0.42 -0.12 -1.85 -0.48 -1.31 -0.76 -0.38 -0.75 -1.04 -0.25 -1.34 -1.12 0.23 -0.4 -0.43 -0.24 0.11 0.3 0.17 -0.42 -0.68 -0.07 0.27 0.01 -0.93 -0.14 0.06 0.09 0.07 0.01 -0.15 -0.4 -0.4 0.14 -0.41 0.47 -0.27 -0.9 -0.36 -0.12 0.02 0.38 -0.05 0.1 -0.32 0.01 -1.36 0.18 -1.21 -0.14 -1.22 0.28 -0.23 0.23 0.09 -0.48 -0.05 0.05 -0.05 0.48 0.28 -0.18 -0.13 0.45 0.59 0.02 0.4 -1.08 0.46 0.33 0.54 0.19 0.13 0.15 0.24 0.08 0.2 0.01 0.62 0.41 0.41 0.13 0.52 0.23 0.22 0.24 0.11 0.12 0.38 0.42 0.23 0.55 0.19 0.09 0.06 0.39 0.25 0.72 0.28 0 -0.09 0.19 0.48 0.76 0.43 0.19 0.5 0.59 0.73 1.04 -0.09 0 -0.25 0.07 0.39 0.46 0.14 0.45 0.48 0.23 0.44 0.27 0.19 0.36 0.51 -0.18 -0.36 0.34 0.45 0.47 0.43 -0.47 -0.05 0.27 0.36 1.15 -0.09 -0.49 -1 -0.8 -0.79 0.49 0.43 0.17 0.34 -0.59 -0.34 -1.92 1.52 -0.11 0.88 0.83 -0.07 -1.01 0.08 0.09 0.17 0.34 0.92 0.08 -0.39 -0.12 0.82 0.95 0.77 0.63 0.37 0.37 0.37 0.78 0.65 -0.27 0.18 -0.19 0.24 0.42 -0.05 0.45 0.16 0.57 0.13 0.44 0.68 -0.08 -1.25 -1.37 -0.04 -0.2 0.4 0.19 -0.42 0.37 -0.05 -1.06 -2.94 1.09 0.23 1.42 0.55 -0.07 0.54 0.53 0.2 -2.96 2.22 At1g03310 264360_at
Encodes a protein with strong similarity to isoamylase (EC:3.2.1.68) however lacks critical residues known to be important for activity. Appears to co localize with ISA1 in the chloroplast isoamylase complex. 7 isoamylase activity
starch degradation




2.06 5.18
At2g43920 0.570
similar to thiol methyltransferase 1 from Brassica oleracea -1.44 0.3 0.3 -0.28 -0.3 -0.96 -0.17 -0.35 -1.41 -0.41 -0.47 -0.18 -1.96 -0.33 -0.92 -1.25 -0.07 0.28 -0.41 -0.33 -0.39 -0.44 0.44 0 -0.16 -0.22 0.28 0.19 0.02 -0.11 -0.43 -0.01 -0.06 0.23 -0.61 0.16 -0.04 0.22 0.24 0.35 0.19 0.02 -0.27 -0.11 -1.06 0.2 0.12 -0.32 -0.15 0.23 0.11 0.6 0.34 0.25 0.17 0.13 -0.32 0.22 -0.19 0.06 -0.35 0.44 0.06 -0.02 0.16 -0.02 0.16 0.13 0.16 0.32 0.2 0.52 0.09 0.78 0.28 0.27 0.43 0.17 0.2 0.36 0.2 0.17 -0.08 -0.14 0.35 0.15 0.41 0.03 0.3 0.42 -0.11 0.14 0.34 0.39 0.18 -0.01 0.28 -0.02 0.56 -0.25 0.33 0.11 0.08 -0.08 -0.09 -0.06 -1.05 -0.73 0.01 -0.32 -0.3 -0.26 0.16 0.18 0.16 0.27 0.28 -0.11 -0.75 -0.81 0.35 -0.28 -1.52 -2.52 -0.54 -0.76 0.19 0.28 -0.15 -0.18 -0.18 0.15 -0.03 -0.07 0.35 0.22 -0.03 0.48 0.24 0.28 0.28 -0.36 -0.66 -0.05 -0.39 0.48 0.34 0.21 0.18 -0.44 -0.88 0.67 0.36 0.21 -0.09 -0.16 -0.39 -0.21 0.43 0.27 0.69 0.23 0.03 -0.72 0.01 0.31 0.48 0.37 0.19 0.54 0.21 -0.55 -0.4 0.09 0.87 0.52 0.27 0.27 0.27 0.27 0.27 0.27 0.27 0.27 0.25 0.45 0.62 0.57 0.17 0.45 0.51 0.4 0.27 0.36 0.16 -0.43 -0.17 0.25 0 0.5 0.22 0.27 0.49 0.4 -0.12 -0.13 -1.28 1.68 0.56 0.33 0.38 -0.11 -0.03 -2.25 -0.1 At2g43920 267233_s_at
similar to thiol methyltransferase 1 from Brassica oleracea 4

carbon monoxide dehydrogenase pathway




1.46 4.21
At4g31850 0.567 PGR3 encodes a protein containing 27 pentatrico-peptide repeat (PPR) motifs -0.84 0.24 0.25 -0.4 -0.22 -0.68 -0.41 -0.42 -1.5 -0.82 -0.57 -0.09 -1.79 -0.61 -0.96 -1.3 -0.44 0.06 -0.55 -0.37 -0.83 -0.78 -0.04 -0.24 -0.62 -0.07 0.14 0.05 -0.01 -0.51 -0.41 0.16 0.07 -0.09 -0.34 0.28 0.22 0.14 0.05 0.33 0.24 -0.01 -0.34 -0.32 -1.02 -0.13 -0.66 -0.89 -0.57 -0.45 -0.04 0.48 0.08 0.23 -0.14 -0.04 -1.22 -0.01 -1.09 0.12 -0.92 0.49 -0.12 0.01 0.2 -0.24 -0.09 0.25 -0.04 0.1 0.2 0.43 0.47 0.36 0.19 0.15 0.56 -1.34 0.3 0.34 0.2 0.16 -0.1 -0.57 0.52 0.21 0.37 0.22 0.35 0.54 0.41 0.01 0.45 0.32 -0.34 -0.18 0.22 -0.14 0.56 0.47 0.3 0.19 0.26 0.21 -0.77 -0.79 -1.92 -1.41 0.78 0.65 0.4 0.56 0.47 0.66 0.33 0.2 -0.15 -0.59 -0.93 -0.98 0.47 0.42 -0.19 0.04 0.61 0.02 0.02 0.53 -0.01 -0.07 -0.1 0.17 -0.14 0.02 -0.15 0.02 0.11 0.13 0.35 0.66 0.43 -0.63 -1.19 0.34 0.06 0.53 0.25 0.16 -0.12 -0.3 -0.1 0.56 0.59 0.65 0.6 0.63 0.56 -0.89 -0.22 0.05 0.53 0.49 -0.25 -0.76 0.55 0.67 0.31 0.14 0.17 0.64 -0.22 0.52 -0.07 0.69 0.57 0.65 -0.23 0.48 0.84 0.6 0.44 0.3 0.09 0.26 0.2 0.56 0.35 0.52 0.38 0.6 0.55 0.6 0.44 0.39 -0.09 -0.87 -0.37 -0.1 0.16 0.09 0.19 0.43 -1 -0.35 -2.29 0.65 0.75 2 0.19 0.04 0.42 0.28 0.83 -1.11 0.54 At4g31850 253495_at (m) PGR3 encodes a protein containing 27 pentatrico-peptide repeat (PPR) motifs 10



mRNA processing in chloroplast


1.69 4.31
At5g13730 0.567 SIGD RNA polymerase sigma subunit SigD (sigD) / sigma-like factor (SIG4) -3.03 0.33 0.35 0.35 -0.43 -0.75 -0.28 -0.36 -2.06 -1.46 -0.01 -0.27 -2.2 0.26 -1.03 -1.43 0.04 -0.14 -0.63 -0.38 -1.02 -1.06 0.16 -0.23 -0.52 -0.17 0.33 0.05 -0.12 -0.32 -0.56 0.04 0.42 0.49 -0.75 0.48 0.55 0.5 0.37 0.44 0.51 0.28 -0.25 0.17 -1.19 0.12 -1.45 -0.94 -0.34 -0.33 -0.4 0.46 0.36 0.2 0.09 -0.09 -0.79 0.05 -0.78 -0.31 -0.44 0.54 0.23 -0.38 -0.28 -0.67 0 0.4 0.06 0.44 0.32 0.35 0.35 0.35 0.38 0.35 0.35 -0.96 0.08 0.36 0.26 0.34 -0.12 -0.23 0.35 0.35 0.35 0 0.35 0.35 0.57 0.72 0.28 0.65 0.21 0.21 0.3 0.35 0.35 0.35 0.35 0.35 0.56 0.75 -0.25 0.33 -1.26 -0.72 0.35 0.35 0.35 0.22 0.35 0.66 0.72 0.68 0.45 0.23 -0.22 0.2 0.35 0.35 0.35 0.44 0.49 0.39 0.38 0.1 -0.02 0.38 0.17 0.49 -0.13 0.19 0.35 0.35 0.35 0.35 0.35 0.35 0.35 -1.55 -0.32 -0.07 -0.35 0.53 0.97 -0.09 -1.02 -2.58 -2.14 0.35 0.35 0.35 0.35 0.35 0.35 -0.84 0.07 0.35 0.28 0.14 0.05 -0.37 0.89 0.97 0.31 0.32 0.35 0.35 0.35 0.35 0.35 0.35 0.35 0.35 0.35 0.35 0.35 0.35 0.35 0.35 0.35 0.35 0.35 0.37 0.35 0.22 0.35 0.35 0.35 0.22 0.46 0.04 -1.33 -1.32 -0.38 0.2 0.57 0.53 0.26 0.13 -1.05 -2.49 -3.06 0.09 -1.01 2.87 0.77 0.93 0.35 -0.09 0.35 -2.66 0.35 At5g13730 250255_at SIGD RNA polymerase sigma subunit SigD (sigD) / sigma-like factor (SIG4) 8 transcription initiation


Transcription (chloroplast)


2.09 5.92
At3g19000 0.566
oxidoreductase, 2OG-Fe(II) oxygenase family protein, similar to Hyoscyamine 6-dioxygenase (Hyoscyamus niger), and to Naringenin,2-oxoglutarate 3-dioxygenase -1.56 0.33 0.01 0.48 0.32 0.12 0.12 0.12 -0.73 -0.73 -0.33 -0.25 -2.13 -0.39 -0.54 -1.1 -0.39 -0.37 -0.53 -0.47 -0.54 -0.54 0.35 -0.59 -0.83 -0.46 0.62 0.41 -0.56 -0.69 -0.69 0.21 0.13 0.34 -1.44 0.38 0.46 0.24 0.14 0.23 -0.07 -0.03 0.15 0.16 -1.01 0.24 -0.72 -1.29 -0.12 -0.44 0.21 0.23 0.05 -0.05 -0.01 -0.21 -1.07 -0.18 -1.2 -0.36 -1.35 0.01 -0.05 -0.25 -0.55 -1.02 -0.02 0.26 0.32 0.28 0.25 -0.01 -0.3 0.13 0.36 -0.32 0.32 -0.91 0.11 0.25 0.49 0.4 0.14 0.11 0.4 0.1 0.27 0.33 0.25 0.5 -0.16 0.23 0.56 0.63 0.15 -0.11 0.27 0.05 0.11 0.4 0.45 0.36 0.2 0.38 0.28 0.32 -0.39 0.22 0.26 0 0.36 0.78 0.36 0.71 0.41 0.33 1.15 1.13 0.55 0.85 0.66 -0.13 -0.02 -0.66 0.31 0.41 0.55 0.22 0.12 0.5 0.13 0.46 0.38 0.11 0.28 0.16 -0.17 0.3 0.61 0.34 0.41 -0.43 -0.43 -0.08 -0.67 0.62 0.74 0.45 -0.4 -2.35 -2.56 0.42 0.26 0.87 0.13 -1.55 -1.51 -2.39 0.07 0.32 0.4 -0.31 -0.83 -0.83 1 0.5 0.31 0.26 0.75 0.55 0.03 0 0.99 0.44 0.48 0.37 0.32 0.32 0.32 0.32 0.32 0.32 0.32 0.32 0.26 0.46 0.03 0.47 0.55 0.43 0.62 0.31 0.51 -0.01 -0.51 -0.69 0.07 -0.01 -0.01 -0.41 -0.91 0.67 0.21 -0.26 0.91 0.37 -0.82 -0.68 0.44 0.56 -0.41 0.01 0.18 -2.19 1.87 At3g19000 256892_at
oxidoreductase, 2OG-Fe(II) oxygenase family protein, similar to Hyoscyamine 6-dioxygenase (Hyoscyamus niger), and to Naringenin,2-oxoglutarate 3-dioxygenase 2

flavonoid biosynthesis




1.94 4.43
At3g49470 0.563
nascent polypeptide-associated complex (NAC) domain-containing protein 0.37 0.19 0.32 0.75 -0.38 -0.98 -0.28 -0.28 -1.56 -0.79 -0.57 -0.09 -1.59 -0.35 -0.78 -0.7 -0.31 0.13 -0.56 -0.5 -0.52 -0.62 0.11 -0.14 -0.23 0 0.12 0.2 0 -0.14 -0.18 0.09 0.18 0.08 -0.76 0.27 0.38 0.4 0.12 0.32 0.48 0.41 0.23 -0.14 -0.99 0.14 0.18 -0.66 -0.22 -0.19 0.08 0.27 0.19 0.09 -0.17 -0.06 -1 0.01 -1.03 -0.13 -0.94 0.18 0.03 0.4 0.12 -0.17 -0.19 0.18 0.09 0.21 0.37 0.14 0.07 0.2 0.14 -0.22 0.13 -0.75 0.18 0.2 0.18 0.23 0.11 0.03 0.22 0.21 0.34 0.13 -0.11 0.31 0.21 0.12 0.11 0.21 -0.09 -0.11 0.22 0.15 0.38 -0.02 -0.33 -0.28 0.23 0.15 -0.56 -0.68 -1.24 -1.64 0.41 0.12 0.13 -0.11 -0.37 -0.32 0.38 0.3 -0.18 -0.03 -0.24 -0.37 0.32 -0.12 -0.78 -1.1 -0.75 -0.52 0.16 0.51 0.16 0.22 -0.12 0.1 -0.03 -0.11 0.51 0.32 0.09 0.28 0.25 0.15 0.44 -0.24 -0.64 0.14 0.03 0.39 0.34 0.18 0.19 -0.19 -0.47 0.37 0.17 0.41 0.05 0.12 -0.05 -0.28 0.1 0.43 0.57 0.2 0.16 0.41 0.4 0.28 0.17 0.32 0.54 0.41 0.39 0.66 0.14 0.39 0.32 0.56 0.09 0.17 0.21 -0.55 -0.49 -0.48 0.41 0.27 0.4 0.54 0.25 0.5 0.18 0.19 0.27 0.43 0.26 0.49 -0.27 -0.66 0.21 0.01 -0.25 -0.04 0.14 -0.12 -0.73 0.21 -0.85 0.7 0.23 1.26 0.07 0.28 0.37 0.28 0.06 -1.47 2.72 At3g49470 252277_at
nascent polypeptide-associated complex (NAC) domain-containing protein 2
protein synthesis | translational control
Transcription | Basal transcription factors



1.38 4.36
At1g22430 0.562
Similar to alcohol dehydrogenase from Lycopersicon esculentum -0.2 -0.43 0.23 0.11 0.28 -0.1 -0.77 0.17 -1.24 -0.63 -0.16 -0.13 -2.19 -0.15 -0.86 -1.38 -0.01 0.06 -0.68 0.04 -0.51 -0.89 0.03 -0.4 -0.53 -0.31 0.14 -0.03 0 -0.3 -0.9 -0.25 0.18 -0.08 -0.56 0.52 0.33 0.61 0.35 0.51 0.45 0.07 0.02 -0.46 -1.07 0.42 -0.93 -0.42 -0.35 -0.59 -0.28 0.2 -0.22 0.25 -0.25 0.37 -0.74 0.5 -0.89 0.34 -0.4 0.43 -0.49 0.03 0.07 -0.32 -0.22 0.09 0.09 -0.14 1.1 0.34 0.5 0.69 0.67 0.4 0.68 -0.43 -0.05 0.08 0.17 0.28 0.01 -0.27 0 0.16 0.56 0.03 -0.12 0.51 0.12 0.28 0.23 0.42 0.04 -0.43 0.21 0.2 0.39 -0.25 -0.21 0.15 -0.12 0.12 -0.53 -0.72 -1.55 -1.53 -0.05 0.52 0.85 0.45 0.72 0.84 0.04 0.28 0.12 -0.12 -0.53 -1.15 0.24 0.27 0.27 0 0.77 0.97 0.16 0.14 -0.03 0.19 -0.1 0.3 -0.08 -0.2 0.45 0.05 -0.09 0.32 0.23 0.49 0.21 -0.49 -0.59 -0.22 -1.13 0.46 0.09 -0.2 -0.28 -0.75 -1.43 -0.14 0.73 0.55 -0.18 -0.61 -0.01 -0.96 0.28 0.23 0.87 0.48 0.28 -0.24 0.37 0.28 0.32 0.36 0.97 0.13 0.49 0.33 0.64 0.24 0.55 0.7 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.23 0.72 0.57 1.06 0.97 -0.16 0.21 1.31 0.23 0.08 0.24 -0.57 -1.39 -0.56 -0.23 0.19 0.74 0.28 0.15 -2.44 -0.17 0.23 0.23 0.23 0.23 0.5 0.19 0.23 -0.17 0.23 -1.48 0.23 At1g22430 261931_at
Similar to alcohol dehydrogenase from Lycopersicon esculentum 4
C-compound and carbohydrate metabolism | fermentation
Glycolysis / Gluconeogenesis | Pyruvate metabolism | Methane metabolism | Fatty acid metabolism | Bile acid biosynthesis | Glycerolipid metabolism | Tyrosine metabolism | 1- and 2-Methylnaphthalene degradation



1.82 3.75
At1g31800 0.561 CYP97A3 cytochrome P450 family protein -0.52 0.05 0.21 0.71 -0.06 0.22 0.09 -0.11 -0.85 -0.78 0.01 -0.11 -1.12 0.07 -0.26 -0.64 0.27 -0.14 -0.5 0.06 -0.66 -0.67 -0.02 -0.17 -0.21 0.13 0.13 -0.06 -0.01 -0.02 -0.1 -0.07 0.33 0.04 -0.38 0.24 0.23 0.19 0.17 0.12 0.1 0.02 0.02 -0.03 -0.91 0.19 -0.56 -0.46 -0.33 -0.34 0.18 0.18 0.01 0.13 -0.2 -0.09 -1.31 0.06 -0.9 0.11 -0.8 0.09 -0.1 0.2 0.14 -0.08 -0.05 0.2 0.01 0.08 0.32 0.47 -0.14 0.39 0.16 0.17 0.21 -0.52 0.08 0.08 0.1 -0.12 -0.03 -0.33 0.33 0.12 0.31 -0.12 0.06 0.27 -0.07 -0.2 0.21 0.07 -0.25 0 0.34 -0.11 0.1 -0.06 0.25 0.35 0.1 0.04 -0.1 -0.83 -1.13 -0.92 0.42 -0.47 -0.06 0.32 0.44 0.41 0.25 0.15 0.02 -0.22 -0.14 -0.16 0.43 -0.15 -0.38 -0.64 -0.01 0.01 0.11 0.39 -0.06 -0.12 -0.07 -0.04 0.01 -0.24 0.24 0.09 -0.51 0.06 0.44 0.23 0.01 -0.12 -0.32 0.08 -0.34 0.34 0.01 0.44 -0.02 -0.77 -0.73 0.89 0.3 0.69 0.22 -0.35 -1.25 -0.25 0.51 -0.49 0.65 0.1 -0.11 -0.36 -0.09 0.04 0.19 0.18 0.44 0.46 -0.25 -0.36 0.74 0.33 0.67 0.07 0.57 0.41 0.49 0.12 0.07 0.27 0.03 0.43 0.6 0.81 0.33 0.79 0.33 0.38 0.42 0.44 0.06 -0.01 0.3 -0.56 -0.15 0.03 0.22 -0.1 -0.08 0.03 -0.35 -0.46 -0.6 0.4 -0.05 0.88 0.19 -0.23 -0.04 -0.09 0 -0.51 1.35 At1g31800 246268_at CYP97A3 cytochrome P450 family protein 1






cytochrome P450 family 1.36 2.66
At5g57030 0.559 LUT2 Lutein-deficient 2 (LUT2) required for lutein biosynthesis, member of the xanthophyll class of carotenoids. Encodes lycopene epsilon cyclase -0.56 -0.06 0.55 0.4 0.17 0.14 0.17 0.07 -1.12 -0.7 -0.31 -0.09 -1.78 -0.34 -0.62 -1.08 -0.46 -0.25 -0.65 -0.42 -0.65 -0.85 -0.16 -0.2 -0.37 -0.32 -0.11 -0.03 -0.06 -0.3 -0.35 -0.08 -0.16 -0.03 -0.63 0.12 0.13 0.12 -0.08 0.18 0.14 0.24 -0.07 -0.36 -1.13 0.19 0.06 -0.97 -0.49 -0.37 0.01 0.42 -0.17 0.14 -0.28 -0.12 -1.09 -0.05 -0.87 0.16 -0.68 0.48 -0.07 0.06 0.11 -0.28 0.06 -0.18 -0.2 0.01 0.11 -0.19 0.06 0.06 -0.07 -0.38 0.36 -0.7 0.18 0.24 0.17 -0.03 -0.12 -0.15 0.01 0.02 -0.14 -0.14 -0.05 0.23 0.28 0.21 0.39 0.02 -0.12 -0.07 -0.14 0.18 -0.04 0.07 -0.13 0.2 0.04 0.47 0.56 -0.13 -0.86 -1.19 0.56 0.78 0.52 0.56 0.32 0.42 0.31 0.62 0.8 0.01 -0.03 -0.56 0.68 0.72 0.43 0.96 0.49 0.67 0.3 0.35 0.33 0.6 0.21 0.1 -0.08 0.08 0.36 0.09 0.26 0.11 0.37 0.05 0.22 -0.09 -0.05 0.21 -0.17 0.56 0.55 0.13 0.06 -0.52 -0.44 0.03 0.52 0.47 0.59 0 0.25 -0.1 0.72 0.03 0.59 0.26 -0.08 -0.62 0.11 -0.06 0.36 0.35 0.44 -0.04 -0.41 -0.35 0.41 0.27 0.12 0.34 0.04 -0.12 0.03 -0.09 -0.19 0.46 0.03 -0.14 0.14 0.28 0.75 0.57 0.02 -0.11 0.28 0.33 -0.08 -0.08 -0.42 -1.06 -0.41 -0.14 -0.41 0 0 -0.15 -0.59 -0.75 -0.4 0.17 0.75 0.96 0.2 0.59 0.42 0.13 0.36 -1.17 0.56 At5g57030 247936_at LUT2 Lutein-deficient 2 (LUT2) required for lutein biosynthesis, member of the xanthophyll class of carotenoids. Encodes lycopene epsilon cyclase 10 carotene biosynthesis | lycopene epsilon cyclase activity | photosynthesis light harvesting
carotenoid biosynthesis Biosynthesis of steroids Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Carotenoid biosynthesis
Carotenoid and abscisic acid metabolism | carotenid biosynthesis
1.46 2.74
At3g18680 0.558
aspartate/glutamate/uridylate kinase family protein, similar to UMP-kinase (Lactococcus lactis) -0.63 0.23 0.24 0.51 0.09 -0.1 0.2 -0.19 -1.29 -0.82 -0.61 0.08 -2.69 -0.62 -0.66 -0.84 -0.54 -0.06 -0.63 -0.43 -0.71 -0.46 -0.19 -0.04 -0.35 0.1 0.36 0.08 0.25 -0.05 0.03 0.3 0.43 0.02 -0.41 0.48 0.33 0.41 0.35 0.35 0.39 0.31 0.22 -0.19 -0.84 0.48 0.25 -0.83 -0.68 -0.04 0.03 0.31 -0.28 0.1 -0.56 0.15 -1.32 0.18 -1.28 0.05 -1.08 0.43 -0.38 0.43 0.45 0 -0.01 0.04 0.22 0.21 0.26 0.13 0.03 0.19 0.02 0.12 0.25 -0.7 0.62 0.2 0.63 -0.02 0 -0.06 0.25 -0.02 0.06 0.08 0.09 0.5 0.36 0.28 0.5 0.06 -0.4 -0.04 0.33 0.17 0.35 0.12 0.06 -0.08 0.57 0.49 -0.56 -1.79 -1.68 -1.37 0.37 0.02 0.13 -0.08 0.21 0.2 0.47 0.44 -0.03 -0.75 -0.41 -0.55 0.24 -0.07 0.1 0.04 -0.24 0.04 0.1 0.52 0.33 0.28 0.23 -0.15 -0.13 0.01 0.36 0.12 0.01 0.25 0.12 0.17 0.25 -0.12 -0.17 -0.05 0.02 0.64 0.64 -0.19 -1.06 -0.87 -0.55 0.15 0.19 0.23 -0.15 0.07 0.22 -0.46 0.84 0.27 0.91 0.66 0.45 -0.2 0.34 0.23 0.22 0.45 0.5 0.25 -0.18 0.09 0.06 0.17 0.33 0.38 0.09 0.08 0.08 0.17 -0.01 -0.25 0.51 0.3 0.31 0.28 -0.04 0.49 -0.12 -0.02 0.33 0.36 0.2 0.08 -0.45 -1.36 0.26 0.4 0.08 0.09 0.09 0.42 -0.59 0.32 -0.87 -0.81 -0.44 2.02 0.33 0.36 0.24 0.32 -0.09 -0.83 1.41 At3g18680 257756_at
aspartate/glutamate/uridylate kinase family protein, similar to UMP-kinase (Lactococcus lactis) 2

proline biosynthesis I | biosynthesis of pyrimidine ribonucleotides




1.39 4.71
At2g35500 0.557
low similarity to shikimate kinase precursor from Lycopersicon esculentum -1.41 0.24 0.25 0.25 -0.48 0.25 0.25 0.25 -1.39 -1.39 -0.54 0.12 -2.34 -0.28 -0.93 -1.58 -0.21 -0.48 -0.81 -0.19 -1.27 -1.27 -0.09 -0.44 -0.85 -0.3 0.16 -0.03 0 -0.72 -0.7 0.22 0.31 -0.03 -0.53 0.32 0.32 0.38 -0.03 0.19 0.28 0.06 -0.09 -0.24 -1.04 0.26 -0.75 -1.05 -0.68 -0.61 0.34 0.39 -0.05 0.26 -0.19 0.19 -0.81 0.31 -0.94 0.38 -0.85 0.5 0.22 0.56 0.35 -0.17 -0.31 0 0.38 0.02 0.25 0.25 0.25 0.25 0.25 0.25 0.25 -0.84 0.54 0.16 0.54 0.6 0.65 0.36 0.25 0.09 0.25 0.25 0.25 0.25 0.31 0.3 0.26 0.21 0.34 0.1 0.25 0.25 0.25 0.25 0.25 0.25 0.4 0.41 -0.57 -1.12 -1.42 -1.97 0.25 0.25 0.25 0.25 0.25 0.25 0.27 0.37 -0.06 -0.86 -0.65 -1.34 0.25 0.25 0.25 0.25 0.25 0.25 -0.04 0.64 0.31 0.3 0.09 -0.1 0.14 0 0.25 0.25 0.25 0.25 0.25 0.25 0.25 -0.22 -0.4 0.34 -0.74 0.63 0.67 -0.11 -0.22 -0.24 -0.49 0.25 0.25 0.47 0.25 0.25 0.25 -0.04 0.72 0.39 0.92 0.7 0.46 0.87 1.01 0.54 0.66 0.59 0.25 0.25 0.25 0.25 0.25 0.25 0.25 0.25 0.04 -0.17 -0.27 -0.69 -0.39 -0.15 0.22 -0.07 0.25 0.25 0.25 0.25 0.25 0.07 0.25 0.62 0.22 -0.09 -0.36 -0.9 0.37 0.35 -0.11 0.27 0.21 0.38 -1.68 -0.25 0.25 0.25 0.25 0.25 -0.04 -0.24 0.25 0.1 0.25 -1.36 1.36 At2g35500 266608_at
low similarity to shikimate kinase precursor from Lycopersicon esculentum 2 aromatic amino acid family biosynthesis, shikimate pathway
chorismate biosynthesis


Shikimate pathway | chorismate biosynthesis
1.89 3.69
At2g40540 0.556 KT2 potassium transporter, putative 1.76 0.25 0.44 0.44 -0.28 -0.57 -0.54 -0.6 -1.13 -0.56 -0.3 0.19 -0.61 0.22 -0.23 -0.46 -0.1 0.03 -0.45 -0.11 -0.71 -0.67 -0.04 -0.35 -0.31 -0.02 0.11 -0.1 -0.24 -0.07 -0.22 -0.11 -0.09 -0.28 -0.75 0.44 0.56 0.44 0.3 0.37 0.35 0.31 -0.07 -0.26 -0.81 0.4 0.08 -0.83 -0.43 0.02 -0.27 0.51 -0.07 0.25 -0.44 -0.07 -1.09 0.22 -1 -0.09 -1.17 0.67 -0.51 -0.13 -0.33 -0.47 -0.05 -0.11 -0.12 -0.06 0.19 0.07 -0.16 -0.13 0.26 0 0.07 -0.71 0.09 0.21 0.42 0.23 0.21 -0.07 0.27 0.18 0.14 0.22 0.28 0.02 0.44 0.32 0.59 0.47 -0.03 -0.18 -0.01 0.12 0.2 0.44 0.15 0.54 0.18 0.3 -0.16 -0.42 -0.9 -1.18 0.11 0.38 0.08 0.44 0.02 -0.13 0.56 0.42 0.4 0.08 -0.04 -0.34 0.31 0.77 0.52 0.64 0.1 0.02 0.18 0.35 0.39 0.45 0.59 0.46 0.11 0.2 0.25 0.21 0.56 0.2 0.71 0.19 0.14 -0.41 0.11 0.06 -0.55 0.49 0.65 0.1 -0.01 -0.79 -1.44 0.02 0.28 0.34 0.32 -0.38 -0.42 -0.6 -0.71 -0.02 0.37 0.46 0.09 -0.03 0.11 0.02 0.17 0.11 0.27 0.1 0.06 -0.06 0.37 0.26 0.02 0.2 0.12 -0.16 -0.44 -1.53 -0.99 -0.28 0.19 0.25 -0.01 0.01 0.21 0.31 0.31 0.03 0.23 0.1 0.07 0.01 -0.79 -0.94 -0.36 -0.13 0.19 0.57 0.49 -0.1 -0.57 -0.24 0.59 -0.22 0.17 0.5 0.52 -0.14 0.21 0.75 0.16 -2.21 1.5 At2g40540 255829_at KT2 potassium transporter, putative 4 potassium ion transport

Membrane Transport | Other ion-coupled transporters



1.44 3.97
At5g13630 0.556 GUN5 Encodes magnesium chelatase involved in plastid-to-nucleus signal transduction. -0.49 0.22 0.8 0.52 -0.16 -0.62 -0.67 -0.52 -1.9 -1.1 -0.72 0.35 -2.5 -0.84 -0.62 -0.97 -0.27 -0.11 -0.76 -0.34 -0.91 -1.12 -0.01 -0.1 -0.53 -0.2 0.05 0.25 0.17 -0.21 -0.53 -0.26 0.12 -0.17 -0.93 0.22 0.25 0.21 0.11 0.21 0.26 0.33 -0.14 -0.27 -1.99 0.34 -0.15 -0.74 -0.62 -0.4 0.03 0.3 -0.33 0.11 -0.68 -0.03 -1.4 0.16 -1.05 -0.19 -1.07 0.16 -0.3 0.08 0.07 -0.02 -0.24 -0.3 0.47 0.16 0.23 -0.26 -0.04 0.56 0.42 0.16 0.11 -0.64 0.17 0.28 0.27 -0.03 0.53 -0.02 -0.17 0.3 0.52 0.35 0.36 0.44 0.38 0.27 0.28 0.05 0.24 -0.17 -0.15 0.22 0.38 -0.01 -0.02 -0.04 0.18 0.25 0.09 -0.55 -1.02 -1.48 -0.18 0.49 0.38 0.33 0.76 0.74 0.3 0.39 0.44 0.08 0.14 -0.48 0.45 0.76 0.16 -0.48 0.09 0.72 -0.36 0.25 0.36 0.45 0.06 -0.04 0.37 0.09 0.93 -0.19 0.32 0.36 0.16 0.26 -0.12 -0.28 0.01 -0.07 0.11 0.35 0.48 0.23 0.46 1.45 -0.33 0.47 0.96 1.07 1.18 0.92 -0.26 -0.25 0.75 -0.36 0.28 0.2 0.4 0.06 -0.03 -0.71 0.3 0.07 0.47 -0.13 -0.02 0.77 0.17 -0.21 0.12 0.05 -0.02 0.14 0.18 0.11 -0.26 0.51 -0.07 0.42 0.16 0.65 1.6 0.75 0.22 0.66 0.09 0.12 0.13 0.34 -0.21 -0.65 0.27 -0.24 -0.45 -0.15 0.22 0.03 -0.82 -1.55 -3.92 -0.14 -0.49 3.67 0.35 -0.27 1.21 -0.92 -0.17 -1.23 2.13 At5g13630 250243_at GUN5 Encodes magnesium chelatase involved in plastid-to-nucleus signal transduction. 6

chlorophyll biosynthesis Porphyrin and chlorophyll metabolism



1.83 7.59
At4g27820 0.553
glycosyl hydrolase family 1 protein; similar to hydroxyisourate hydrolase (Glycine max) -2.33 0.2 0.12 0.12 -0.4 -0.92 -0.65 -0.62 -1 -0.7 0.12 0.25 -0.9 -0.56 -1.06 -1 -0.08 -0.18 -0.59 0.03 -0.7 -0.62 0.18 -0.63 -0.83 -0.18 0.07 0.1 -0.38 0.01 -0.83 -0.15 -0.46 0.04 -0.93 0.28 -0.17 0.13 -0.39 0.36 -0.36 -0.13 -0.13 -0.09 -1.39 -0.19 -0.95 -0.76 -0.44 -0.44 -0.33 0.02 -0.25 -0.24 -0.23 -0.51 -1.29 -0.5 -1.23 -0.75 -1.07 0.08 -0.39 -0.7 -0.12 -0.77 -0.01 -0.4 -0.63 -0.15 0.06 0.02 0.26 0.04 0.59 0.48 0.37 -1.04 -0.15 0.18 0.16 0.25 0.07 -0.06 0.2 0.27 0.31 0.08 0.14 0.62 -0.69 0.35 0.6 0.36 0.06 0.17 0.55 0.38 0.41 0.39 0.51 1 -0.24 0.11 -0.36 0.19 -0.92 -0.77 0.01 -0.23 0.35 0.5 1.12 1.24 -0.12 0.18 0.24 -0.37 -0.6 -0.78 0.2 0.22 0.13 -0.54 0.56 1.12 0.63 0.51 0.75 -0.16 -0.11 -0.08 -0.31 -0.28 0.27 0.13 0.05 0.09 0.37 0.35 0.79 -0.91 -2.06 1.42 2.9 0.9 -0.37 -0.11 1.48 2.76 2.31 0.56 0.49 -0.35 0.52 2.91 3 -2.24 -0.09 0.05 0.35 0.12 -1.85 -1.23 0.45 0.48 0.35 0.63 1.02 0.28 -0.16 -0.1 0.46 0.19 0.67 0.73 0.05 0.05 0.05 0.05 0.93 0.92 0.05 0.05 0.2 0.91 0.01 0.35 -0.04 0.45 0.21 0.09 0.78 0.19 -0.23 -0.74 -0.68 -0.13 0.38 0.34 -0.71 -0.05 -0.99 -0.8 0.05 0.05 -1.51 1.26 0.97 0.88 0.15 0.53 -0.4 -0.87 0.05 At4g27820 253835_at
glycosyl hydrolase family 1 protein; similar to hydroxyisourate hydrolase (Glycine max) 1
C-compound and carbohydrate metabolism




Glycoside Hydrolase, Family 1 2.10 5.33
At5g14660 0.552 PDF1B encodes a peptide deformylase-like protein -1.59 0.03 0.22 0.22 0 -0.97 -0.3 -0.21 -0.86 -0.51 -0.01 0.04 -1.93 -0.23 -0.86 -1.03 -0.26 -0.41 -0.74 -0.01 -0.63 -0.74 0.04 -0.31 -0.49 -0.2 -0.15 -0.05 -0.11 -0.45 -0.57 0.06 0.24 0.18 0.53 0.24 0.2 0.27 0.18 0.22 0.2 -0.02 -0.05 -0.17 -1.25 0.49 0.32 -0.93 -0.5 -0.21 0.18 0.34 -0.16 0.17 -0.35 0.21 -1.14 0.18 -1.12 0.13 -0.76 0.21 -0.14 0.33 0.11 -0.28 -0.38 -0.3 -0.23 -0.18 0.28 0.22 0.22 0.22 0.22 0.22 0.18 -0.69 0.37 0.32 0.59 0.27 0.27 0.13 0.25 0.22 0.22 0.22 0.31 0.18 0.04 0.16 0.44 0.2 -0.14 -0.23 0.22 0.13 0.25 0.22 0.22 0.18 0.07 0.18 0.11 -0.78 -1.39 -2.04 0.22 0.22 0.22 0.22 0.22 0.18 0.25 0.1 0.23 -0.47 -0.63 -0.82 0.22 0.22 0.22 0.22 0.22 0.18 0.17 0.33 0.28 0.34 0.18 -0.11 -0.12 -0.2 0.22 0.22 0.22 0.22 0.22 0.45 0.18 -0.11 -1.24 0.19 0.25 0.65 0.28 0.49 0.57 -0.1 -0.05 0.22 0.22 0.22 0.22 0.22 0.18 -0.05 0.86 0.22 0.92 0.43 0.09 -0.67 -0.02 0.14 0.52 0.48 0.11 0.3 0.22 0.22 0.22 0.22 0.57 0.21 0.11 0.01 -0.99 -0.89 -0.75 -0.85 0.3 0.2 0.22 0.28 0.23 0.41 0.28 0.27 0.18 0.41 0.34 0.17 0.62 -0.05 -0.12 -0.32 -0.22 -0.07 0.09 0.08 -1.76 -0.5 0.22 0.22 -0.49 1.31 0.43 0.63 0.22 -0.26 -0.06 0.5 2.69 At5g14660 250146_at PDF1B encodes a peptide deformylase-like protein 10
protein modification

Translation (chloroplast)


1.50 4.73
At5g03650 0.551 SBE2.2 Encodes starch branching enzyme (E.C.2.4.1.18) similar to SBE2 from maize and rice. Expressed throughout the plant and highest in seedlings and cauline leaves. -1.09 NA 0.28 1.18 -0.28 -0.66 -0.11 -0.37 -1.58 -0.94 -0.26 0.09 -3.03 -0.49 -0.87 -1.58 -0.06 -0.56 -0.74 -0.1 -1.1 -0.98 -0.24 -0.57 -0.61 -0.21 0.12 0.07 -0.2 -0.08 -0.34 0.04 0.16 0.13 -0.37 0.25 0.01 0.08 0.26 0.32 -0.05 -0.18 -0.35 -0.17 -0.72 0.15 -0.89 -0.97 -0.43 -0.52 0.28 0.38 0.24 0.25 -0.03 0.08 -0.93 0.14 -0.85 0.35 -0.74 0.47 0.08 0.19 0.06 -0.13 0.01 -0.09 0.22 0.16 0.68 0 -0.03 -0.15 0.35 -0.04 -0.09 -0.56 0.25 0.25 0.56 0.47 0.44 0.3 0.25 0.18 0.19 0.26 -0.21 0.39 0.35 0.19 0.56 0.3 0.54 0.1 0.28 0.17 0.22 0.17 -0.12 -0.3 0.15 -0.02 0.03 -0.05 0.07 -0.28 -0.04 -0.01 -0.34 0.53 -0.12 0.56 0.11 0.1 0.27 0.02 0.61 0.56 0.5 0.32 -1.12 -0.9 -0.35 0.12 0.1 0.28 0.39 0.26 0.51 0.22 0.3 0.14 0.63 0.46 0.41 -0.11 0.22 0.12 0.2 -0.57 -1 -0.05 0.23 0.36 -0.02 0.02 0.2 0.26 -0.46 0.28 0.11 0.4 1.03 0.45 -0.43 0.02 0.77 -0.68 0.53 0.25 0.08 0.43 0.17 -0.09 0.57 0.37 0.63 -0.2 0.26 1.27 1.01 0.54 0.56 0.23 0.15 0.17 0.36 0.6 0.42 0.48 0.26 -0.22 0.12 0.07 0.11 -0.24 0.21 0.09 0.27 0.28 0.28 -0.04 -0.19 -0.78 0.06 -0.11 -0.16 0.15 0.2 0.22 -0.99 -0.88 -2.49 -0.31 -1.61 2.35 0.35 0.67 -0.03 -0.06 0.34 -0.13 0.15 At5g03650 250906_at SBE2.2 Encodes starch branching enzyme (E.C.2.4.1.18) similar to SBE2 from maize and rice. Expressed throughout the plant and highest in seedlings and cauline leaves. 6 amylopectin biosynthesis C-compound, carbohydrate catabolism | sugar, glucoside, polyol and carboxylate catabolism starch biosynthesis Starch and sucrose metabolism Cell Wall Carbohydrate Metabolism | starch metabolism


1.58 5.38
At1g32200 0.549 ATS1 precursor to the plastid-located glycerol-3-phosphate acyltransferase.Involved in the biosynthesis of C-16 unsaturated fatty acids. 0.1 0.07 -0.09 -0.28 -0.34 -0.81 -1 -0.64 -0.84 -0.76 -0.41 -0.06 -1.34 -0.2 -1.07 -0.28 -0.12 -0.06 -0.9 -0.34 -1.01 -1.09 -0.07 -0.56 -0.74 -0.17 -0.03 0.06 0.08 -0.39 -0.71 -0.24 -0.16 0 -0.46 0.32 0.24 0.28 0.02 0.19 0.1 0.02 -0.26 -0.4 -1.12 0.31 -0.32 -0.91 -0.33 -0.46 0.16 0.22 -0.32 0.16 -0.52 -0.15 -1.43 0.15 -1.23 0.04 -1.02 0.1 -0.27 0.32 0.33 0.09 -0.19 -0.45 0.4 -0.18 0.31 0.19 0.56 0.16 0.47 0.53 0.66 -1.03 0.41 0.45 0.83 0.32 0.85 0.39 0.47 0.5 0.15 0.23 0.09 0.6 0.41 0.72 0.71 0.18 0.28 -0.18 0.32 0.45 0.01 0.5 0.28 0.24 0.26 0.32 -0.09 -0.87 -1.07 -1.99 0.35 0.47 0.62 0.74 0.89 1.12 0.31 0.43 0.24 -0.44 -0.18 -1.01 0.34 0.9 0.66 0.97 0.77 0.7 0.01 0.08 0.55 0.47 0.52 -0.1 0.32 0 -0.08 0.68 0.81 0.56 0.52 0.19 0.38 -0.02 0.28 -0.01 -0.78 0.35 0.31 0.02 0.18 0.22 -0.85 -0.12 0.42 -0.11 0.2 -0.19 -0.78 0.17 0.78 -0.05 0.3 0.53 0.14 -0.55 -0.39 -0.06 0.87 0.17 0.11 0.21 -0.02 0.19 0.13 0.41 0.04 0.12 0.02 -0.17 -0.43 -0.48 -0.23 0.26 0.13 0.16 0.18 0.19 0.36 -0.2 0.31 0 0.32 0 0.16 0.15 -0.23 -1.12 0.12 0.13 -0.28 0.06 0.48 -0.04 -0.59 -0.94 -1.91 0.25 -0.8 1.58 0.32 0.23 0.46 -0.03 0.09 -1.69 1.45 At1g32200 245790_at ATS1 precursor to the plastid-located glycerol-3-phosphate acyltransferase.Involved in the biosynthesis of C-16 unsaturated fatty acids. 10 glycerol-3-phosphate O-acyltransferase activity

Glycerolipid metabolism Leaf Glycerolipid Biosynthesis | Leaf Glycerolipid Biosynthesis in Plastid Synthesis of membrane lipids in plastids

1.81 3.58
At5g44520 0.549
low similarity to Ribose 5-phosphate isomerase (Mus musculus) -0.72 0.44 -0.24 1.83 -0.45 -1.78 -0.42 -0.86 -1.19 -0.88 -0.13 0.38 -1.64 -0.16 -1.11 -1.01 0.09 -0.01 -0.51 0.09 -0.5 -0.62 0.17 0.2 -0.89 0.02 -0.11 -0.01 0.43 -0.21 -0.45 0.19 -0.17 -0.1 -0.32 0.46 0.21 0.36 0.27 0.22 0.44 0.02 -0.1 -0.28 -1.36 0.15 -0.18 -0.67 -0.07 -0.06 0.09 0.32 0.38 0.15 -0.12 0.21 -0.9 0.12 -0.66 0.06 -0.45 0.54 0.09 0.1 -0.4 -0.52 0.18 0.1 -0.49 -0.04 0.55 -0.24 0.12 0.68 0.72 0.61 0.6 -0.82 0.18 -0.02 0.45 0.61 0.24 0.26 0.26 0.4 0.73 0.38 0.65 0.75 -0.12 -0.09 0.31 0.35 0.33 0.55 0.03 0.01 0.45 0.44 0.94 0.65 -0.14 -0.33 -0.43 0.04 -0.49 -0.89 -0.45 -0.71 -0.11 -0.08 0.46 0.37 -0.27 -0.28 0.06 -0.22 -0.6 -0.37 0.12 -0.69 -0.15 -0.11 0.19 0.07 0.4 0.51 -0.23 -0.18 0.4 0.55 -0.03 0.42 0.34 -0.25 0.04 0.35 0.39 0.85 0.52 -0.39 1.28 0.23 -0.22 0.28 -0.12 0.23 0.81 -0.11 -0.72 0.19 0.03 0.46 -0.15 0.32 -0.13 -1.08 0.61 0.47 0.82 0.27 -0.34 -1.41 -0.32 0.57 0.33 0.47 0.28 -0.36 -0.23 -0.51 -0.61 0.18 0.4 0.52 -0.01 0.06 0.21 0.25 0.25 -0.14 -0.41 0.61 -0.24 0.22 0.19 0.61 0.33 0.85 0.46 -0.08 -0.17 -0.6 -0.16 -0.84 -0.04 0.06 0.01 0.8 0.28 -0.48 -1.4 -1.08 0.26 0.26 0.26 0.26 -0.18 0.83 0.26 0 0.36 -1.85 0.32 At5g44520 249002_at
low similarity to Ribose 5-phosphate isomerase (Mus musculus) 2

Calvin cycle | ribose degradation | non-oxidative branch of the pentose phosphate pathway | superpathway of gluconate degradation




1.66 3.68
At3g50530 0.548 CRK similar to calcium/calmodulin-dependent protein kinase CaMK3 (Nicotiana tabacum); CDPK-related kinase 0.5 NA 0.13 0.21 -0.53 -0.72 0.01 -0.02 -0.97 -0.28 0.08 -0.15 -1.12 0.55 -0.8 -0.7 0.24 0.05 -0.83 -0.31 -0.54 -0.72 0.1 -0.19 -0.56 -0.22 -0.14 0 0.01 -0.32 -0.33 -0.15 -0.17 0.45 -0.1 0.34 0.28 -0.04 0.15 0.09 -0.04 -0.39 -0.57 -0.01 -0.54 0.15 0.61 -1.02 -0.3 -0.19 -0.01 0.57 0.19 0.36 0.2 0.08 -0.48 0.28 -0.37 -0.04 -0.33 0.48 0.12 0.02 -0.04 -0.62 0.17 0.25 -0.13 0.3 0.2 0.06 -0.02 -0.03 -0.14 -0.34 0.19 -0.65 0.32 0.31 0.3 0.35 0.04 -0.15 0.17 0.26 0.25 -0.06 0.1 0.07 0.28 0.3 0.28 0.49 0.22 0.02 -0.04 0.28 0.27 0.14 0.18 0.48 0.14 0.25 -0.7 -0.7 -0.65 -0.87 0.14 0.39 -0.22 -0.09 -0.51 0.06 0.49 0.43 -0.27 0.01 -0.15 -0.52 0.15 0.21 -0.16 -0.53 -0.52 -0.05 0.6 0.18 0.04 0.22 0.15 0.49 0.17 0.08 0.12 -0.01 -0.09 0.28 0.18 0.14 0.2 -0.24 0.4 0.28 -0.08 0.56 0.37 0.2 0.39 -0.52 -0.65 0.16 0.34 0.51 -0.03 -0.72 -0.35 -0.59 0.04 -0.33 0.6 0.43 0.07 -0.39 0.13 0.44 0.47 0.47 0.52 0.1 -0.03 -0.32 0.28 0.15 -0.04 0.52 -0.25 -0.34 -0.42 0.13 0.25 -0.19 0.14 0 0.13 0.24 0.44 0.3 0.22 0.07 0.14 0.16 0.08 -0.11 -0.39 -0.2 -0.13 -0.16 0.02 0.56 0.25 0.04 -1.11 0 -0.01 0.43 -0.16 0.35 0.2 0.2 -0.02 0.45 0.5 -0.9 0.82 At3g50530 252158_at CRK similar to calcium/calmodulin-dependent protein kinase CaMK3 (Nicotiana tabacum); CDPK-related kinase 2
intracellular signalling
Inositol phosphate metabolism | Nicotinate and nicotinamide metabolism | Benzoate degradation via CoA ligation



1.22 1.94
At4g12310 0.547 CYP706A5 cytochrome P450 family protein -1.2 NA -0.39 0.28 -0.38 -0.97 0.01 -0.26 -2.02 -0.6 0.17 -0.45 -2.74 -0.5 -1.48 -0.86 0 -0.16 -0.51 -0.17 -0.96 -0.9 0.01 -0.56 -0.97 -0.53 0.37 0.13 -0.35 -0.8 -1.01 -0.14 0.49 -0.26 -0.99 0.31 0.37 0.52 0.44 0.56 -0.07 0 0.56 0.07 -0.99 0.43 -0.62 -0.51 0.02 -0.09 0.06 0.31 0.31 0.01 0.08 -0.02 -0.56 0.01 -0.55 -0.03 -0.39 0.72 0.12 0.05 0.06 -0.02 0.4 0.09 0.02 0.32 -0.55 0.16 0.57 0.88 0.56 1.26 0.12 -2.08 0 0.42 0.23 -0.18 -0.11 0.01 0.25 0.51 0.8 -0.01 0.62 0.49 -0.49 0.34 0.5 0.15 0.14 0.16 -0.45 0.48 0.71 0.76 0.77 0.64 0.3 0.61 -0.74 -1.28 -3.02 -2.47 0.43 0.21 0.67 0.37 1.58 1.3 0.16 0.44 -0.35 -0.7 -1.02 -0.63 -0.49 0.76 0.86 0.74 1.07 1.08 0.71 0.97 0.75 -0.13 0.33 0.12 0.01 -0.25 -0.33 -0.31 0.6 0.44 0.67 0.95 -0.28 -1.53 -1.42 0.6 1.26 0.89 -0.19 0.4 -0.24 -0.59 -1.12 0.37 0.44 0.87 0.76 0.79 0.82 -2.78 -0.93 0.39 0.88 0.11 -1.26 -0.95 -0.03 0.05 0.33 0.42 0.41 0.23 0.49 1.01 0.96 0.09 1.56 0.82 0.42 0.36 0.87 0.28 0.28 0.28 0.36 0.28 0.18 0.26 0.6 0.85 0.39 0.94 0.28 0.45 1.13 -0.15 -0.8 -1.86 -0.3 0.09 0.01 0.4 -0.6 -0.17 -1.08 -2.41 -0.75 1.06 0.28 0.28 0.28 -0.16 0.18 1.3 0.05 -3.33 0.4 At4g12310 254835_s_at CYP706A5 cytochrome P450 family protein 1
biosynthesis of secondary products derived from primary amino acids | biosynthesis of glycosinolates and derivatives




cytochrome P450 family 2.42 4.91
At4g36360 0.546 BGAL3 similar to beta-galactosidase (Lycopersicon esculentum) 0.49 -0.22 0.25 -0.01 -0.42 -0.52 -0.26 -0.32 -1.78 -1.39 -0.04 0.47 -1.76 -0.45 0.04 -0.84 0.05 -0.8 0.32 -0.3 -1.12 0 0.05 -0.44 -0.76 -0.8 -0.46 0.52 0.03 -0.47 -0.79 -0.41 -0.01 -0.33 -1.09 -0.12 -0.46 -0.16 -0.38 0.2 -0.43 -0.56 -1 -0.06 -0.96 0.34 0.56 -0.45 -1 -0.73 -0.1 -0.01 0.04 -0.17 -0.28 -0.83 -1.53 -0.48 -1.09 -0.97 -1.19 0.15 0.05 0.3 0.28 0.79 0.91 0.14 0.1 0.03 0.28 0.12 -0.23 -0.28 -0.35 -0.26 -0.16 -0.71 0.36 0.51 0.56 0.12 0.25 0.23 0.42 0.07 0.11 -0.22 0.01 -0.04 0.42 0.16 0.68 0.21 0.24 0.08 0.07 -0.09 0.05 0.14 -0.14 0.04 0.34 0.41 0.44 -0.13 0 -0.66 0.51 0.45 0.87 0.6 -0.26 0.31 0.6 0.49 0.69 0.76 0.77 0.68 0.22 0.51 0.13 -0.57 0 0.11 0.26 0.68 0.89 0.6 0.89 -0.1 0.26 0.2 -0.02 0.56 0.25 0 0.09 0.27 0.11 -0.27 -1.22 1 1.08 0.39 0.65 0.56 0.91 0.63 -0.27 0.32 0.26 0.74 0.37 -0.13 0.52 0.37 0 -0.11 0.31 0.55 0.52 -0.11 -0.69 0.18 0.51 0.28 0.14 0.23 0.23 -0.49 -1.53 -0.2 -0.28 0.03 0.3 0.46 0.96 0.82 0.65 0.83 0.63 0.44 -0.08 0.75 0.11 -0.03 -0.4 -0.28 -0.13 0.25 0.26 -0.03 -0.03 -0.72 -0.14 -0.44 0.23 -0.07 -0.57 0.09 -1.87 -0.38 -0.67 -0.91 -0.77 1.05 -0.01 -0.07 0.01 1.24 0.32 -2.57 3.2 At4g36360 253090_at BGAL3 similar to beta-galactosidase (Lycopersicon esculentum) 4
C-compound and carbohydrate metabolism | biogenesis of cell wall lactose degradation IV




1.93 5.78
At2g28470 0.545 BGAL8 beta-galactosidase, putative / lactase, putative, similar to Beta-galactosidase from Lycopersicon esculentum) 0.19 0.14 0.17 0.68 0.03 -0.28 -0.26 -0.15 -1.17 -1.04 -0.42 0.38 -2.58 -0.42 0.14 -1.12 -0.26 -0.04 -0.97 -0.34 -0.43 -1.67 0.06 -0.43 -0.73 0.04 0.25 0.48 0.02 -0.53 0.11 -0.06 -0.11 0.03 -0.6 0.09 0.06 0.27 0.04 0.23 -0.03 -0.16 -0.79 -0.23 -0.97 0.36 0.52 -0.55 -1.37 -0.59 0.13 0.38 0.02 0.02 -0.3 0.09 -1.25 0.18 -1.04 -0.11 -1.11 0.34 -0.2 0.28 0.17 -0.21 -0.01 0.01 -0.12 0.19 0.68 0.14 0.09 0.69 -0.41 0.2 0.11 -1.02 0.37 0.41 0.43 0.13 0.02 -0.21 0.07 -0.11 0.72 -0.15 0.02 0.04 0.35 0.09 0.52 0.25 -0.03 0.09 0.3 0 1.08 -0.18 0.17 0.06 0.2 0.27 0.48 0.21 -0.08 -0.01 0.04 -0.14 0.53 0.04 -0.08 -0.23 0.45 0.44 1.1 0.95 0.84 0.81 0.25 -0.03 -0.76 -2.35 -0.26 -1.08 0.46 0.43 0.5 0.23 0.12 0.12 0.11 0.33 0.26 0.08 -0.26 0.49 -0.87 0.28 0.17 -0.19 0 0.2 -0.07 0.61 0.38 0.24 0.28 0.01 -2.02 0.64 0.43 1.33 0.28 0.33 -0.45 -0.34 -0.73 -0.33 0.52 0.65 -0.3 -1.17 0.1 -0.05 0.17 0.11 0.73 0.06 -0.02 -0.38 -0.36 -0.06 0.49 0.54 -0.32 -1.05 -1.12 -0.36 0.67 1.15 0.35 0.53 0.66 0.14 -0.03 1.15 0.25 0.19 1.19 0.05 0.24 0.17 -0.65 -1.03 -0.47 -0.51 0.54 1.08 0.11 0.11 -0.25 -0.67 -0.59 0.31 -0.23 2.63 0.31 0.25 0.03 0.23 0.22 -1 1.66 At2g28470 264078_at BGAL8 beta-galactosidase, putative / lactase, putative, similar to Beta-galactosidase from Lycopersicon esculentum) 4

lactose degradation IV




1.91 5.21
At1g73300 0.543
serine carboxypeptidase S10 family protein -0.56 0.1 0.31 0.28 0 0.25 0.49 0.37 -1.23 -1.1 -0.34 -0.22 -1.9 -0.34 -0.81 -1.36 -0.36 -0.31 -1.2 -0.55 -0.88 -1.33 -0.03 -0.44 -0.74 -0.2 0.03 -0.01 -0.16 -0.65 -0.67 -0.27 0.18 0.12 -0.67 0.32 0.12 0.2 0.28 0.3 0.2 0.04 -0.2 -0.15 -1.14 0.03 -0.15 -0.68 -0.55 -0.36 0.13 0.45 -0.15 0.13 -0.34 -0.1 -1.37 0.11 -1.02 -0.08 -0.92 0.17 -0.27 0.22 0.1 -0.2 0.08 -0.23 0.06 -0.26 -0.14 0.36 0.65 -0.17 0.09 0.16 0.41 -0.65 0.13 0.5 0.63 -0.01 0.44 0.04 0.3 0.6 -0.11 -0.19 0.5 0.03 0.09 0.55 0.87 0.28 0.23 -0.21 0.21 0.8 0 0.42 0.2 0.18 0.15 0.27 -0.25 -0.91 -1.46 -1.49 0.71 0.62 0.06 -0.09 0.19 0.17 0.26 0.43 0.28 -0.2 -0.33 -0.2 0.28 0.55 -0.1 -0.25 0.17 0.14 0.31 0.74 0.49 0.45 0.34 -0.13 0.08 -0.11 -0.03 0.09 0.64 0 -0.04 0.28 0.16 -0.43 -1.78 0.87 0.96 0.82 0.41 0.85 0.24 -0.72 -0.97 0.16 0.84 -0.04 0.43 0.13 0 -1.19 -0.17 0.28 1.07 0.38 -0.24 -0.31 0.23 0.17 0.71 0.51 -0.17 0.3 0.82 0.86 -0.02 0.66 0.45 0.49 0.66 0.39 0.77 0.4 0.96 0.93 0.07 0.46 -0.17 0.13 0.42 0.21 -0.01 0.4 -0.34 0.57 0.44 0.36 0.05 -0.99 -0.14 -0.45 0.28 -0.26 -0.19 0.05 -0.9 -1.43 -1.67 1 -0.84 1.51 0.39 0.34 0.28 0.62 0.25 -1.5 0.28 At1g73300 257500_s_at (m)
serine carboxypeptidase S10 family protein 2






serine carboxy peptidase like, clade IA 2.04 3.40
At3g10840 0.543
hydrolase, alpha/beta fold family protein -0.56 0.1 0.31 0.28 0 0.25 0.49 0.37 -1.23 -1.1 -0.34 -0.22 -1.9 -0.34 -0.81 -1.36 -0.36 -0.31 -1.2 -0.55 -0.88 -1.33 -0.03 -0.44 -0.74 -0.2 0.03 -0.01 -0.16 -0.65 -0.67 -0.27 0.18 0.12 -0.67 0.32 0.12 0.2 0.28 0.3 0.2 0.04 -0.2 -0.15 -1.14 0.03 -0.15 -0.68 -0.55 -0.36 0.13 0.45 -0.15 0.13 -0.34 -0.1 -1.37 0.11 -1.02 -0.08 -0.92 0.17 -0.27 0.22 0.1 -0.2 0.08 -0.23 0.06 -0.26 -0.14 0.36 0.65 -0.17 0.09 0.16 0.41 -0.65 0.13 0.5 0.63 -0.01 0.44 0.04 0.3 0.6 -0.11 -0.19 0.5 0.03 0.09 0.55 0.87 0.28 0.23 -0.21 0.21 0.8 0 0.42 0.2 0.18 0.15 0.27 -0.25 -0.91 -1.46 -1.49 0.71 0.62 0.06 -0.09 0.19 0.17 0.26 0.43 0.28 -0.2 -0.33 -0.2 0.28 0.55 -0.1 -0.25 0.17 0.14 0.31 0.74 0.49 0.45 0.34 -0.13 0.08 -0.11 -0.03 0.09 0.64 0 -0.04 0.28 0.16 -0.43 -1.78 0.87 0.96 0.82 0.41 0.85 0.24 -0.72 -0.97 0.16 0.84 -0.04 0.43 0.13 0 -1.19 -0.17 0.28 1.07 0.38 -0.24 -0.31 0.23 0.17 0.71 0.51 -0.17 0.3 0.82 0.86 -0.02 0.66 0.45 0.49 0.66 0.39 0.77 0.4 0.96 0.93 0.07 0.46 -0.17 0.13 0.42 0.21 -0.01 0.4 -0.34 0.57 0.44 0.36 0.05 -0.99 -0.14 -0.45 0.28 -0.26 -0.19 0.05 -0.9 -1.43 -1.67 1 -0.84 1.51 0.39 0.34 0.28 0.62 0.25 -1.5 0.28 At3g10840 257533_at
hydrolase, alpha/beta fold family protein 2




Lipid signaling

2.04 3.40
At1g14030 0.542
strong similarity to Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N- methyltransferase -1.3 NA 0.28 0.28 0 0.28 0.28 0.28 -1.62 -1.3 -0.39 -0.61 -2.45 -0.45 -1.57 -0.98 -0.03 -0.03 -0.53 -0.13 -1.57 -0.55 0.04 -0.21 -0.77 -0.14 0.27 0.11 0.01 -0.48 -0.56 0.04 0.22 -0.17 -0.63 0.36 0.53 0.67 0.41 0.11 0.37 0.53 -0.34 -0.37 -0.99 0.39 0.12 -0.91 -0.76 -0.63 -0.09 0.36 0.08 0.15 -0.3 0.3 -0.97 0.26 -0.86 0.18 -0.66 0.51 0.19 -0.06 -0.08 -0.3 -0.26 0.02 -0.03 -0.03 0.28 0.28 0.28 0.18 0.3 0.25 0.22 -0.69 0.74 0.42 0.65 0.48 0.24 0.21 0.35 0.22 0.26 0.24 0.04 0.17 0.65 0.36 0.54 0.45 -0.1 0.31 0.21 0.28 0.28 0.08 0.11 0.11 0.49 0.56 -0.57 -0.75 -1.13 -1.71 0.28 0.28 0.28 0.22 0.28 0.22 0.6 0.38 -0.18 -0.5 -0.42 -0.6 0.28 0.28 0.28 0.22 0.28 0.09 0 0.33 0.34 0.5 0.23 0.36 0.27 0.28 0.28 0.28 0.28 0.28 0.24 0.28 0.09 -0.62 -0.41 -0.21 -0.26 0.28 0.33 -0.06 -0.68 -1.13 -1.23 0.28 0.2 0.28 0.22 0.28 0.22 -2.06 1.05 0.28 0.36 0.51 0.21 0.01 -0.18 -0.08 0.2 0.07 0.28 0.39 0.28 0.28 0.28 0.32 0.28 0.22 0.28 0.28 0.28 0.28 0.28 0.28 0.28 0.28 0.28 0.46 0.28 0.51 0.13 0.22 0.22 0.22 0.24 0.56 -0.21 -1 0 0.3 0.15 0.41 0.13 -0.12 -1.3 0.11 0.28 0.28 0.28 0.28 0.67 -0.23 0.28 0.05 0.28 -2.04 0.28 At1g14030 262648_at
strong similarity to Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N- methyltransferase 6
C-compound and carbohydrate metabolism | glycolysis and gluconeogenesis | photosynthesis

Intermediary Carbon Metabolism


1.70 3.49
At1g75820 0.539 CLV1 CLAVATA1 receptor kinase (CLV1). Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). -3.38 0.51 0.35 0.53 -2.34 -0.93 -0.93 -0.93 -1.24 -1.24 -1.73 -0.23 -2.42 -1.22 -1.58 -2.42 -0.24 0.09 -0.9 -1.08 -0.14 -0.72 0.03 -0.08 -0.52 -0.01 0.28 0.14 -0.16 -0.25 0.16 0.28 0.06 0.19 -0.48 0.5 0.34 0.28 0.12 0.46 0.37 -0.15 -0.28 -0.01 -0.98 0.16 0.28 -0.86 -0.75 -0.39 0.26 0.42 0.08 -0.09 0.56 -0.21 -0.71 -0.3 -1.12 -0.16 -0.45 0.42 0.5 0.74 0.49 -0.4 -0.28 0.03 -0.11 0.5 0.92 0.65 0.13 0.47 0.25 0.38 0.46 -0.47 0.28 0.36 0.56 0.59 0.28 0.19 0.46 0.27 0.56 -0.07 0.15 0.72 0.74 0.62 0.5 0.39 0.19 0.03 0.3 0.38 0.81 -0.01 0.02 0.81 0.04 0.28 -0.26 -1.04 -0.81 -1.4 0.16 0.36 0.04 -0.1 -0.18 0.32 0.41 0.53 -0.09 -0.66 -0.5 -1.1 0.36 0.44 0.5 -0.22 -0.04 -0.51 0.22 0.78 0.28 -0.15 0.22 0.48 0.11 0.44 0.23 0.41 0 0.37 0.23 0.24 0.35 -0.69 0.66 0.24 -0.53 0.37 -0.19 0 0.04 -0.19 -1.12 0.39 0.33 0.66 0.22 -0.18 0.11 -0.38 -2.09 0.39 0.7 0.51 -0.75 -1.47 0.28 0.16 0.24 0.46 0.69 0.79 0.17 -0.16 0.04 0.79 0.3 0.28 0.39 0.39 0.39 0.39 0.39 0.39 0.39 0.39 0.19 0.49 -0.07 0.32 0.54 0.44 0.27 0.77 0.32 0.33 -0.19 -0.64 -0.2 -0.07 0.91 1.06 0.77 0.25 -2.43 -0.99 -0.36 1.12 0.31 2.29 0.59 0.44 0.06 0.01 0.39 -0.92 0.39 At1g75820 262728_at CLV1 CLAVATA1 receptor kinase (CLV1). Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). 6 signal complex formation | regulation of meristem organization | cell differentiation

Inositol phosphate metabolism | Nicotinate and nicotinamide metabolism | Benzoate degradation via CoA ligation



2.00 5.68
At3g15850 0.535 FAD5 fatty acid desaturase family protein. Chloroplastic enzyme responsible for the synthesis of 16:1 fatty acids from galactolipids and sulpholipids. Uses ferredoxin as electron donor. -0.13 0.37 0.03 1.36 -0.71 -0.98 -0.4 -0.52 -1.65 -0.88 -0.54 0.21 -2.33 -0.34 -1.11 -0.87 0.14 0.23 -0.62 -0.57 -1.03 -0.96 -0.03 -0.4 -0.85 -0.41 0.23 0.31 0.04 -0.92 -1.08 -0.23 -0.15 -0.01 -0.95 0.21 0.35 0.34 0.08 0.28 0.56 0.56 0.49 -0.26 -2.5 0.16 -0.5 -0.96 -0.49 -0.47 0.06 0.57 0.11 0.19 -0.22 -0.09 -1.24 -0.03 -1.15 -0.1 -0.89 0.38 0.09 0.23 0.22 0.03 0.33 0.56 0.59 0.94 0.26 0.12 0.45 0.55 0.48 0.24 0.35 -1.25 0.22 0.22 -0.05 -0.08 -0.09 -0.18 0.1 0.21 0.42 0.22 0.25 0.38 -0.05 -0.07 0.14 -0.02 -0.45 -0.08 0.3 0.43 0.7 0.32 0.33 0.15 0.21 -0.03 -0.88 -1.62 -2.88 -3.41 0.27 0.44 0.66 0.36 0.55 0.24 0.21 0.04 -0.37 -0.65 -1.36 -1.3 0.37 0.11 0.11 0.13 0.09 -0.05 0.16 0.43 -0.18 -0.03 -0.08 0.16 -0.07 -0.03 0.59 0.18 0.32 0.41 0.24 0.34 0.07 -0.77 -0.77 0.59 -0.68 0.27 0.63 0.75 0.83 0.53 -0.99 0.48 0.65 0.45 0.17 0.32 0.26 -0.05 0.34 0.28 0.43 -0.18 -0.16 0.55 0.49 -0.01 0.11 0.51 0.52 0.38 0.36 0.42 0.86 0.48 0.64 0.16 0.01 -0.36 -0.38 0.19 0.62 0.41 0.75 0.46 0.74 0.57 0.56 1.59 0.57 0.55 0.22 0.37 0.46 0.19 0.16 -0.25 0 0.2 -0.92 0 0.08 -0.31 -0.23 0.27 -0.45 0.85 0.39 1.04 0.17 0.28 0.54 0.5 -0.05 -1.13 1.51 At3g15850 258250_at FAD5 fatty acid desaturase family protein. Chloroplastic enzyme responsible for the synthesis of 16:1 fatty acids from galactolipids and sulpholipids. Uses ferredoxin as electron donor. 7 fatty acid desaturation | 16:0 monogalactosyldiacylglycerol desaturase activity | photoinhibition
glycosylglyceride desaturation pathway
Leaf Glycerolipid Biosynthesis | Leaf Glycerolipid Biosynthesis in Plastid Synthesis of membrane lipids in plastids

1.86 5.00
At3g02660 0.534
tRNA synthetase class I (W and Y) family protein, similar to Tyrosyl-tRNA synthetase (Bacillus stearothermophilus) 0 0.1 -0.22 0.7 0.08 -0.39 0.14 -0.02 -0.73 -0.42 -0.5 0.01 -0.81 -0.23 -1.08 -0.87 -0.3 0.05 -0.1 -0.3 -0.5 -0.34 -0.24 -0.22 -0.3 -0.15 0.11 -0.26 -0.08 -0.19 -0.53 0.02 0.09 0.31 -0.09 0.24 0.38 0.51 0.12 0.35 0.23 0.08 0.05 -0.25 -0.89 0.23 0.16 -0.95 -0.05 -0.32 0.03 0.76 0.14 0.3 -0.22 -0.1 -0.98 0.18 -0.88 0.21 -0.44 0.31 -0.23 0.05 0.22 -0.26 -0.04 -0.07 0.01 -0.2 0.4 -0.06 0.42 0.1 0.08 0.21 0.25 -0.44 0.27 0.23 0.34 0.33 0.25 -0.14 0.16 0.27 -0.12 0.15 0.4 0.02 0.08 0.44 0.46 0.26 0.31 -0.01 0.19 0.35 -0.06 0 -0.01 0.02 0.01 0.07 -0.46 -0.6 -1.07 -1.45 0.36 0.47 -0.15 -0.35 -0.43 -0.17 0.11 0.17 0.08 -0.09 -0.28 -0.74 0.16 0.07 -0.27 -0.2 -0.37 -0.39 0.03 0.34 0.4 0.22 0.19 0.11 0.11 -0.14 0.28 0.07 0.36 0.21 0.15 0.18 0.28 -0.04 0.2 0.3 0.14 0.56 0.28 0.11 0.04 -0.38 -0.56 0.49 0.39 0.12 0.01 -0.21 -0.55 -0.36 0.4 -0.42 0.66 0.56 0.15 -0.03 0.17 0.76 0.38 0.28 0.15 0.08 -0.01 -0.09 0.06 0.13 0.13 0.22 0.08 0.09 -0.02 -0.31 -0.28 -0.02 0.15 0.18 0.09 0.07 0.34 0.17 -0.06 0.08 -0.09 0.28 0.16 -0.1 -0.46 -0.59 -0.04 -0.09 0.21 -0.33 0.05 -0.05 -0.34 -0.16 0.24 0 0.05 1.01 0.09 0.12 0.68 0.53 0.34 -0.03 -0.01 At3g02660 258475_at
tRNA synthetase class I (W and Y) family protein, similar to Tyrosyl-tRNA synthetase (Bacillus stearothermophilus) 2

tRNA charging pathway | mevalonate pathway Phenylalanine, tyrosine and tryptophan biosynthesis | Aminoacyl-tRNA biosynthesis Phenylpropanoid Metabolism | Aromatic amino acid (Phe, Tyr, Trp) metabolism


1.11 2.45
At5g52440 0.534 HCF106 Thylakoid membrane delta pH translocation pathway component protein; related to Escherichia coli TatA and TatB -0.59 0.38 0.3 0.3 -0.82 -1.19 -1.19 -1.19 -1.37 -0.98 -0.34 0.14 -1.31 -0.39 -0.83 -0.98 -0.4 0.11 -0.55 -0.37 -1.03 -0.71 0.07 -0.05 -0.49 -0.04 0.18 0.21 0.03 -0.33 -0.15 0.02 0.19 0.24 -0.34 0.46 0.41 0.64 0.22 0.24 0.22 0.49 0.26 -0.33 -1.12 0.15 0.07 -0.64 -0.15 -0.31 0.16 0.42 0.08 0.39 -0.13 0.49 -0.83 0.38 -1 0.16 -0.67 0.34 -0.07 0.25 -0.04 -0.04 0.25 0.04 0.31 -0.23 0.34 0.35 -0.08 0.02 0.54 0.65 0.31 -0.65 0.15 0.2 0.19 0 0.1 -0.44 0.09 0.07 0.28 0.44 0.3 0.23 0.16 0.03 0.38 0.05 -0.11 -0.02 0.45 0.37 0.15 0.46 0.26 0.13 0.24 0.11 -0.56 -0.56 -1.08 -1.17 -0.35 -0.11 0.39 0.34 0.81 0.56 0.13 0.34 0.06 -0.18 -0.5 -0.63 0.47 -0.16 -0.14 -0.21 0.19 0.13 0.17 0.65 -0.19 -0.05 -0.03 0.01 0.22 0.04 0.65 -0.28 -0.17 0.17 0.5 0.48 0.16 -0.31 0.21 -0.09 -0.6 0.27 0.52 -0.1 -0.32 -0.39 -1.04 0.49 0.49 0.4 0.51 0.17 -0.44 -0.74 -0.36 0.02 0.76 0.46 0.34 0.31 0.75 0.25 0.4 0.11 0.53 -0.02 -0.04 -0.17 0.6 0.39 0.64 0.31 0.03 -0.37 0.1 -0.35 -0.27 0.28 0.51 0.53 0.11 0.16 0.12 0.34 0.46 0.39 0.16 0.49 -0.06 0.11 -0.4 -1.01 -0.05 0.04 0.14 0.47 0.04 -0.01 -0.07 -0.46 -2.91 0.74 0.15 1.67 0.37 0.18 0.3 -0.08 0.3 -0.9 1.2 At5g52440 248338_at HCF106 Thylakoid membrane delta pH translocation pathway component protein; related to Escherichia coli TatA and TatB 10 chloroplast thylakoid membrane protein import | delta-pH-dependent transporter activity


Pathway for nuclear-encoded, thylakoid-localized proteins | Delta-pH pathway


1.63 4.58
At3g17040 0.533 HCF107 Required for normal processing of transcripts from the polycistronic chloroplast psbB-psbT-psbH-petB-petD operon coding for proteins of the photosystem II and cytochrome b6/f complexes. 0.31 0.17 0.19 0.76 -0.92 -0.44 0.05 -0.28 -1.9 -1.09 -0.59 0.3 -1.9 -0.62 -0.23 -1.18 -0.16 0.13 -0.56 -0.51 -0.75 -1.03 0 -0.28 -0.61 -0.05 0.04 0.19 -0.34 -0.6 -0.31 -0.3 -0.25 -0.05 -0.8 0.16 0.22 0.12 0.06 0.24 0.1 0.19 -0.25 -0.36 -1.72 0.01 -0.12 -0.83 0.1 0.12 -0.24 0.49 -0.04 0.12 -0.11 -0.03 -0.91 0.03 -0.79 -0.13 -0.32 0.21 0.03 -0.1 -0.15 -0.32 -0.1 -0.11 0.4 -0.15 0.39 0.09 -0.21 0.41 0.16 0.02 0.16 -0.89 0.06 0.19 0.2 0.08 0.02 -0.3 0.3 0.1 -0.03 0.19 0.11 0.46 0.35 0.13 0.4 0.28 0.06 -0.21 0.53 0 0.35 0.04 0.13 -0.12 -0.07 0.18 -0.28 -0.41 -0.52 -1.68 0.13 -0.39 0.02 0.34 0.95 0.95 0.16 0.22 0.23 0.11 -0.17 -1.08 0.8 -0.05 0.17 -0.72 -0.11 0.34 -0.01 0.16 -0.23 0.08 0.11 0.12 0.55 0.14 0.85 0.13 -0.08 0.24 0.15 0.15 0.08 -1.15 0.49 0.22 0.02 0.04 0.3 0.17 0.4 0.43 -1.82 0.69 0.28 0.56 -0.13 -0.28 -0.64 -0.49 0.01 0.12 0.32 0.25 0.24 0.51 0.42 -0.38 0.48 -0.08 0.47 0.41 0.06 0.75 0.57 0.19 0.41 0.52 0.19 0.19 0.28 0.19 0.19 0.19 0.19 0.19 0.3 1.32 1.43 0.63 0.19 0.35 0.36 0.17 0.02 0.5 -0.44 -0.32 0.47 -0.24 -0.2 0.41 0.14 -0.04 -1.32 -0.87 -0.39 1.12 1.31 0.19 0.55 0.28 0.19 -0.2 -0.02 -1.02 1.92 At3g17040 257932_at HCF107 Required for normal processing of transcripts from the polycistronic chloroplast psbB-psbT-psbH-petB-petD operon coding for proteins of the photosystem II and cytochrome b6/f complexes. 4 RNA processing | plastid organization and biogenesis


mRNA processing in chloroplast


1.73 3.82
At4g11175 0.533
translation initiation factor IF-1, chloroplast, putative -1.13 0.28 -0.06 0.56 -0.36 -0.38 0.06 -0.05 -0.96 -0.51 -0.6 -0.09 -0.87 -0.33 -0.64 -0.95 -0.44 -0.07 -0.44 -0.44 -0.75 -0.81 0.28 0.07 -0.18 -0.16 0.28 0.17 0.27 -0.11 -0.46 0.1 0.4 0.18 -0.13 0.27 0.45 0.44 0.22 0.11 0.43 0.36 0.22 -0.12 -0.65 0.21 0.48 -0.66 -0.15 -0.15 -0.01 0.51 -0.03 0.11 -0.3 0.13 -0.95 0.22 -0.87 -0.06 -0.56 0.19 -0.13 0.21 0.15 -0.31 -0.05 0.14 -0.04 0.03 0.08 0.42 0.48 0.34 0.62 0.05 0.28 -0.81 0.01 0.08 -0.14 -0.1 -0.23 -0.5 0.27 0.15 -0.15 0.19 -0.38 0.13 -0.36 -0.19 0.09 -0.07 -0.57 -0.24 0.28 0.22 -0.07 0.35 -0.06 0.17 -0.18 -0.09 -0.62 -0.69 -1.29 -1.34 0.06 0.24 -0.19 0.1 0.03 0.03 0.12 0.02 0.05 -0.16 -0.27 -0.51 0.14 0.09 0.53 0.51 -0.15 -0.23 0.24 0.36 -0.19 -0.23 -0.41 -0.23 -0.16 -0.24 0.24 -0.1 -0.16 0.08 0.16 -0.24 0.14 -0.17 -0.78 0.67 0.48 0.41 0.17 0.34 0.07 0.05 -0.12 0.25 0.27 0.16 0.08 -0.12 -0.35 -0.48 0.05 0.23 0.53 0.17 -0.09 -0.47 0.32 0.33 0.13 0.39 0.18 0.18 0.19 0.49 0.94 0.76 0.51 0.74 0.03 0.08 0.07 -0.18 0.17 0.11 0.57 0.4 0.54 0.47 0.39 0.11 0.54 0.42 0.35 0.6 0.28 -0.08 -0.14 -0.66 -0.08 0.03 -0.1 0.01 -0.07 -0.16 0.08 -0.61 -0.63 0.09 0.15 0.85 0.51 0.78 0.04 0.65 0.31 -0.72 0.93 At4g11175 254910_at
translation initiation factor IF-1, chloroplast, putative 4


Translation factors Translation (chloroplast)


1.33 2.28
At5g58490 0.533
similar to cinnamoyl-CoA reductase from Pinus taeda and Eucalyptus gunnii -0.08 -0.02 -0.02 0.39 -0.35 -0.23 0.23 -0.04 -0.76 -0.73 -0.33 0.19 -0.14 -0.14 -0.48 -0.12 -0.52 -0.11 -0.5 -0.39 -0.63 -0.33 0.08 -0.14 -0.22 -0.01 0.06 0.16 -0.05 -0.17 -0.14 0.01 0.31 0.08 -0.11 -0.25 -0.02 0.02 0.07 0.04 -0.07 0.05 -0.02 0.19 -0.11 0.18 0.06 -0.34 -0.01 -0.01 -0.14 0.17 -0.11 -0.05 -0.38 -0.23 -1.2 0 -1.11 -0.22 -0.91 0.28 -0.28 0.13 0.17 -0.1 -0.09 -0.24 0.11 0.08 -0.01 -0.06 -0.1 -0.09 0.03 0.12 0.01 -0.32 0.2 0.17 0.15 0 0 0.06 -0.03 0.1 0.14 0.04 0.17 0.07 0.28 0.16 0.14 0.01 0.06 0.18 -0.08 -0.07 -0.1 0.08 0.02 0.12 0.41 0.21 0.03 0.13 0.28 0.85 -0.04 -0.17 0.02 0.28 0.45 0.19 0.28 0.22 0.38 0.18 0.38 0.68 0.08 -0.12 -0.44 -0.48 0.02 0.05 0.2 0.13 0.2 0.11 0.14 0 0.03 0.04 0.2 -0.09 -0.15 0.05 0.1 0.25 0.08 -0.23 0 0.55 -0.09 0.26 0.09 -0.19 -0.66 -0.88 -0.48 0.05 0.01 -0.28 -0.36 -0.36 -0.75 -0.57 0.13 0.08 0.39 0.47 0.19 0.37 0.32 -0.09 0.23 0.12 0.19 0.07 -0.07 0.09 0.2 0.2 0.32 0.16 0.13 0.04 -0.19 -0.06 0.09 0 0.36 0.05 -0.04 -0.05 -0.1 -0.09 0.01 0.25 -0.02 0.26 0.25 0.02 -0.22 -0.56 0.28 0.14 0.22 -0.12 -0.01 0.54 0.9 0.65 0.34 -0.5 -0.8 1.06 0.38 -0.07 0.17 -0.17 -0.01 -0.89 1.19 At5g58490 247834_at
similar to cinnamoyl-CoA reductase from Pinus taeda and Eucalyptus gunnii 2
C-compound and carbohydrate utilization | biosynthesis of secondary products derived from L-phenylalanine and L-tyrosine | biosynthesis of phenylpropanoids | biogenesis of cell wall colanic acid building blocks biosynthesis | dTDP-rhamnose biosynthesis | galactose degradation I | UDP-glucose conversion | lactose degradation IV
Phenylpropanoid Metabolism | core phenylpropanoid metabolism
Phenylpropanoid pathway
0.99 2.38
At1g11860 0.532
Similar to aminomethyltransferase, mitochondrial precursor from Flaveria anomala -0.63 -0.37 0.55 0.36 -0.06 -0.54 -0.36 -0.16 -1.79 -1.11 -0.14 0.01 -3.22 -0.11 -0.72 -1.65 0.11 0.15 -0.87 -0.11 -0.71 -1.17 -0.07 -0.14 -0.49 -0.22 0.1 -0.04 -0.05 -0.28 -0.57 -0.1 0.11 0.05 -0.33 0.26 0.34 0.36 0.14 0.14 0.23 0.22 -0.3 -0.19 -1.55 0.22 -0.07 -0.55 -0.26 -0.5 0.02 0.42 0.05 0.25 -0.14 0.2 -0.78 0.18 -0.8 0.26 -0.67 0.34 0.08 0.28 0.26 0.11 -0.1 -0.11 0.06 0.1 0.66 0.11 0 0.46 0.34 0.27 0.37 -0.53 0.35 0.4 0.74 0.5 0.36 0.2 0.43 0.1 0.4 0.2 0.13 0.33 0.51 0.4 0.59 0.65 0.21 0.12 0.28 0.1 0.51 0.24 -0.01 0.1 0.26 0.23 -0.13 -0.82 -1.68 -2.06 0.08 0.02 0.19 -0.01 -0.2 -0.13 0.46 0.45 0.3 -0.2 -0.43 -0.65 0.1 -0.06 -0.56 -1.47 -0.73 -0.63 0.27 0.73 0.46 0.35 0.38 0.19 0.15 0.22 0.56 0.28 0.21 0.5 0.23 0.31 0.68 -0.13 -0.74 0.35 -0.22 0.53 0.31 0.61 0.64 -0.22 -0.35 0.26 0.14 0.72 0.12 0.05 -0.31 -0.13 0.59 0.18 0.51 0.55 0.34 0.19 -0.31 0.24 0.07 0.15 0.47 0.15 0.13 0.04 0.3 0.39 -0.1 0.31 0.28 0.08 -0.06 -0.69 -0.47 -0.39 0.42 0.31 0.56 0.24 0.22 0.74 0.53 0.37 0.59 0.53 0.36 0.32 0.14 -0.48 -0.21 -0.14 0.16 -0.1 0.04 -0.18 -1.14 -1.55 -1.01 0.72 -0.22 1.13 0.43 0.18 0.39 -0.27 0.41 -1.03 1.68 At1g11860 264394_at
Similar to aminomethyltransferase, mitochondrial precursor from Flaveria anomala 2

glycine degradation I Nitrogen metabolism | Glycine, serine and threonine metabolism | One carbon pool by folate



1.67 4.90
At2g39930 0.531
isoamylase, putative / starch debranching enzyme, putative, similar to isoamylase from Solanum tuberosum, Triticum aestivum, Hordeum vulgare, and Oryza sativa 0.07 0.41 0.36 0.62 0 -0.16 0.03 -0.2 -1.31 -1.33 -0.34 0.31 -1.78 0.02 -0.98 -1.08 -0.4 -0.34 -0.64 -0.55 -0.86 -0.83 -0.03 -0.22 -0.21 0.23 0.3 -0.03 0.02 -0.16 -0.11 0.01 0 -0.03 -0.38 0.03 0.09 0.18 0 0.09 -0.01 -0.19 -0.37 -0.12 -0.56 0.36 -0.3 -0.96 -0.01 0.17 0.04 0.21 0.09 0.1 -0.12 0.04 -1.21 0.09 -1.19 -0.12 -0.98 0.25 -0.07 0.18 0.06 -0.55 0.07 0.32 0.32 0.39 0.31 0.45 0.53 0.61 0.09 0.12 0.35 -0.88 0.26 0.14 0.28 0.2 0.1 -0.23 0.11 0.45 0.3 0.11 0.09 0.44 0.25 0.05 0.27 0.45 0.4 0.08 0.51 0.57 0.4 0.03 0.28 0.42 0.19 0.09 -0.23 -0.02 -0.54 -1.45 0.36 0.19 -0.19 -0.31 -0.34 -0.31 0.24 0.34 0.49 0.31 0.62 -0.35 0.48 0.39 -0.02 -0.43 -0.52 -0.69 0.31 0.15 -0.01 -0.15 0.12 0.43 0.28 0.14 0.41 -0.04 0.03 0.01 0.15 0.05 0.43 -0.43 0.78 -0.19 -0.17 0.46 -0.11 -0.56 -0.66 -0.37 -1.02 0.42 0.4 0.31 -0.07 -0.47 -0.84 0.11 0.57 0.25 0.6 0.4 0.14 -0.22 0.46 0.04 0.45 0.13 0.56 0.5 0.51 0.56 0.19 0.38 0.5 0.39 0.03 -0.07 -0.46 -0.62 -0.83 -0.67 0.47 0.23 0.51 0.51 0.52 0.41 0.36 0.59 0.23 0.56 0.22 -0.17 -1.01 -0.66 0.38 -0.12 0.27 0.42 0.09 0.22 -0.28 -0.03 -1.18 0.67 -1.2 0.93 -0.01 0.68 0.56 0.37 0.05 -1.92 1.05 At2g39930 267356_at
isoamylase, putative / starch debranching enzyme, putative, similar to isoamylase from Solanum tuberosum, Triticum aestivum, Hordeum vulgare, and Oryza sativa 7 isoamylase activity | amylopectin biosynthesis
starch biosynthesis




1.59 2.97
At1g17220 0.530
Similar to Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) from Phaseolus vulgaris -0.43 0.25 0.24 0.53 -0.36 -0.79 -0.68 -0.45 -1.43 -0.77 -0.57 -0.24 -1.79 -0.56 -1.12 -0.86 -0.34 0.08 -0.34 -0.41 -0.84 -0.7 0.01 -0.39 -0.45 -0.08 0.22 0.13 -0.11 -0.31 -0.31 0.26 0.14 0.06 -0.95 0.23 0.27 0.22 0.18 0.3 0.05 0.11 -0.04 -0.03 -1.17 0.14 -0.92 -0.61 -0.09 0.13 0.05 0.31 0.11 0.09 -0.12 -0.01 -1.01 0.01 -0.92 0.01 -0.78 0.12 -0.1 0.26 0.31 -0.06 -0.2 0.42 -0.09 0.5 0.13 0.07 -0.42 -0.02 0.35 -0.28 0.21 -0.8 0.28 0.21 0.1 0.04 -0.23 -0.39 0.33 0.04 0.05 0.24 0.28 0.56 0.15 -0.08 0.31 0.18 -0.22 0.07 0.64 0.04 0.34 -0.03 0.25 0.32 0.1 0.22 -0.24 -0.39 -0.9 -0.83 0.14 0.07 0.14 0.49 0.87 0.86 0.49 0.42 0.08 -0.13 -0.57 -0.8 0.62 0.28 0.01 0.11 0.01 0.28 -0.04 0.6 0.19 0.3 0.02 0.27 0.04 0.14 0.55 0.27 -0.22 0.18 0.42 0.32 0.15 -0.28 -0.72 0.2 0.28 0.22 0.65 0.45 0.55 -0.08 -0.3 0.4 0.08 0.5 0.39 0.36 0.16 -0.72 0.23 0.34 0.3 0.14 -0.14 -0.79 -0.3 0.18 0.16 0.2 0.41 0.09 -0.47 0.44 0.3 0.48 0.43 0.01 -0.14 0.48 -0.28 0.25 -0.38 0.22 0.95 0.52 0.46 0.84 0.63 0.78 0.47 0.18 0.64 0.56 0.4 0.31 0.32 -0.31 -0.15 0.22 -0.15 0.1 0.3 0.18 -1.65 -0.92 -3.76 0.62 0.19 3.11 0.09 0.17 0.28 0.37 -0.26 -2.25 0.94 At1g17220 262483_at
Similar to Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) from Phaseolus vulgaris 4


Translation factors Translation (chloroplast)


1.54 6.87
At2g24060 0.530
translation initiation factor 3 (IF-3) family protein 0.14 -0.01 0.07 1.25 0.2 -0.21 -0.25 -0.16 -1.62 -0.96 -0.33 -0.08 -1.98 -0.3 -1.14 -1.11 -0.3 -0.09 -0.65 -0.22 -0.86 -0.74 -0.17 -0.07 -0.97 -0.27 0.12 0.17 0.12 -0.45 -0.43 -0.04 0.24 -0.07 -0.63 0.3 0.38 0.15 0.13 0.31 0.28 0.48 0.23 -0.2 -0.91 0.47 0.64 -0.84 -0.71 -0.39 0.21 0.15 -0.2 0.16 -0.37 0.36 -1.21 0.23 -0.89 0.1 -1.03 0.12 -0.27 0.39 0.46 0 -0.38 -0.05 0.19 0.3 -0.01 0.63 0.14 0.53 0.42 0.52 0.55 -1.06 0.42 0.23 0.41 -0.21 0.21 0.14 0.55 0.24 0.39 0.36 0.24 0.59 0.27 0.2 0.17 -0.17 -0.03 0.07 0.51 0.14 0.35 0.06 0.32 0.12 0.46 0.31 -0.54 -2 -1.59 -1.52 1.19 0.08 0.16 0.1 0.32 0.16 0.4 0.16 -0.18 -1.09 -0.54 -0.63 0.65 -0.16 -0.28 -0.3 0.07 -0.02 0.12 0.26 0.09 0.05 -0.33 -0.62 0.01 0.12 0.42 0.27 -0.02 0.21 0 0.15 0.28 -0.22 -1.37 0.14 0.1 0.28 0.56 0.17 -0.49 -0.28 -0.02 0.94 0.62 0.7 0.16 0.37 -0.33 -0.44 0.6 0.06 0.46 0.28 0.34 -0.36 -0.59 -0.28 0.26 0.42 0.07 0.99 0.39 0.73 -0.06 0.45 0.34 0.28 -0.34 -0.31 -0.4 -0.01 -0.18 0.2 0.59 0.21 0.33 0.81 -0.03 1.05 0 0.22 0.46 0.4 0.47 0.41 0.36 -1.34 0.01 0.28 -0.03 -0.06 0.09 -0.01 -0.61 -0.57 -0.39 -0.19 0.36 1.01 0.34 0.17 1 -0.26 0.01 -1.04 1.44 At2g24060 266575_at
translation initiation factor 3 (IF-3) family protein 2


Translation factors



1.73 3.45
At3g25660 0.530
similar to Glutamyl-tRNA(Gln) amidotransferase subunit A (Bacillus subtilis) 0.15 0.14 0.21 0.22 0.11 -0.03 0.08 -0.02 -1.1 -0.68 -0.31 0.04 -1.64 -0.41 -0.52 -1.12 -0.15 0.12 -0.63 -0.22 -0.59 -0.69 -0.13 -0.41 -0.21 -0.28 -0.01 -0.26 0.01 -0.07 -0.57 -0.21 0.1 0.12 -0.27 0.28 0.54 0.25 0.28 0.02 0.09 0.16 -0.07 -0.26 -1.02 0.17 0.33 -0.57 -0.56 -0.54 0.28 0.35 -0.09 0.23 -0.28 0.15 -0.93 0.21 -0.82 0.04 -0.86 0.3 -0.32 0.64 0.28 -0.03 -0.23 0.02 0.15 -0.01 0.31 0.28 -0.08 0.34 0.44 -0.04 0.25 -0.61 0.34 0.15 0.4 0.14 0.26 -0.25 0.21 0.15 0.15 0.33 -0.03 0.42 0.25 0.24 0.36 0.17 -0.1 -0.28 -0.01 0.18 0.31 0.42 -0.05 0.06 0.06 0.14 -0.54 -1.09 -1.55 -2.04 0.11 0.11 0.28 0.23 -0.14 -0.2 -0.04 0.25 -0.1 -0.44 -0.42 -0.99 0.16 0.15 0.14 0.38 -0.34 -0.23 -0.27 0.93 0.09 0.03 0.17 -0.05 0.06 -0.15 0.41 0.25 0.11 0.36 0.36 0.19 0.52 0.08 -0.48 0.08 -0.38 0.68 -0.26 0 -0.14 -0.11 -0.7 0.34 -0.12 -0.07 0.09 0 -0.2 0.04 0.44 0.06 1.22 0.66 0.28 -0.09 0.16 0 0.24 0.3 0.68 0.22 0.12 0.05 0.45 0.38 0.43 0.56 0.07 -0.15 0.06 -0.18 -0.06 -0.1 0.31 0.3 0.48 0.13 0.28 0.32 0.21 -0.04 0.24 0.95 0 0.27 0.02 -0.77 0.03 -0.34 -0.03 0.16 0.26 -0.09 -0.57 -0.07 -0.16 0.05 -0.17 1.38 0.22 0.17 0.28 0.1 0.31 -0.47 0.96 At3g25660 256728_at
similar to Glutamyl-tRNA(Gln) amidotransferase subunit A (Bacillus subtilis) 2


Other translation factors



1.31 3.43










































































































































































































































page created by Juergen Ehlting 07/05/06