Co-Expression Analysis of: CYP74B2, HPL1 (At4g15440) Institut de Biologie Moléculaire des Plantes











































































































































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Mutant Data Set save / view heatmap as: OpenOffice Table annotation details for co-expressed genes can be found to the right of the heatmap

























































































































































MS Excel Table

























































































































































save / view all data as: Tab delimited Table For further information on the experiments please go to the Genevestigator database using the experiment-ID given in brackets.






















































































































































shown are a maximum of 50 genes with r>0.5 (If more co-expressed genes with r>0.5 exist, they can be saved as Tab delimited data only) magnitude of change  [log2(mutant / wild type)]  0   0.3   0.6   0.9  1.2   1.5   1.8   2.1   2.4   2.7   >3















































































































































greater than zero                                                         



















































































































































less than zero                                                         



















































































































































Locus r-value Name Description 35S leafy, seedling (143) aba1, fresh seeds (96) abi1, fresh seeds (96) abi3, fresh seeds (96) acn1, seedlings (63) acn1, seedlings, with sucrose (63) add3, seedling (55) ag12, shoot apex (89) ag12, flower (89) akt1, roots (141) anr1, roots, dex treated, N03 depleted (64) anr1, roots, not dex treated, N03 depleted (64) anr1, roots, nitrate depleted (135) ap1, shoot apex (89) ap1, flower (89) ap2, shoot apex (89) ap2, flower (89) ap3, shoot apex (89) ap3, flower (89) ape2, mature leaf, high light (68) ape3, mature leaf, low light (68) ARR22o, seedling (115) ARR22o, seedling, zeatin (115) ar4, whole plant (104) bountifullo, juvenile leaf (48) camta1, suspension cell (138) camta1, seedling (138) cdb1, seedling (137) cdpk-yfp1, seedling (65) cdpk-yfp4, seedling (65) chs, juvenile leaf (67) cir1-PR1-LUC, whole rosette (31) cir1-ein2-PR-LUC, whole rosette (31) cls8, seedling (76) cls8, seedling, 4°C (76) clv3, shoot apex (89) clv3, flower (89) cngc1, roots (141) cngc4, roots (141) co, apical region, vegetative (94) co, apical region, reproductive, 3d (94) co, apical region, reproductive, 5d (94) co, apical region, reproductive, 7d (94) coi1, senescing leaf (60) cov, stem, base (66) cov, stem, tip (66) det2, seedling, mock, 30min (111) det2, seedling, BL, 30min (111) det2, seedling, mock, 1h (111) det2, seedling, BL, 1h (111) det2, seedling, mock, 3h (111) det2, seedling, BL, 3h (111) det2, seedling (131) ein2, senescing leaf (60) ein2-PR1-LUC, whole rosette (31) etr1, whole plant, water (99) etr1, whole plant, GA4, 60 min (99) fls2, seedling, control (81) fls2, seedling, flg22 (81) ft, apical region, vegetative (94) ft, apical region, reproductive, 3d (94) ft, apical region, reproductive, 5d (94) ft, apical region, reproductive, 7d (94) fus, fresh seeds (96) ga1, seedling, mock, 30min (111) ga1, seedling, GA3, 30min (111) ga1, seedling, mock, 1h (111) ga1, seedling, GA3, 1h (111) ga1, seedling, mock, 3h (111) ga1, seedling, GA3, 3h (111) ga1, seedling (131) gl1, rosette leaf, stage 10 (88) gl1, rosette leaf, stage 12 (88) gpa1, seedling, ABA, 3h (75) gpa1, seedling (75) gun1-gun5, whole plant, Norflurazone (98) hic, guard cell enriched (11) hic, mature leaf (11) hic, guard cell enriched, CO2 (11) hic, mature leaf, CO2 (11) iae1, hypocotyl (139) iae2, hypocotyl (139) icl2 (Col), seedling (28) icl2 (Ws), seedling (28) ir1, roots (142) ku80, whole plant (57) ku80, whole plant, bleomycin, 3d (57) leafy-GR, seedling, de (143) leafy-GR, seedling, de/cyc (143) leafy-GR, seedling, cyc (143) lfy, shoot apex (89) lfy, flower (89) lfy, apical region, vegetative (94) lfy, apical region, reproductive, 3d (94) lfy, apical region, reproductive, 5d (94) lfy, apical region, reproductive, 7d (94) ms1-ttg, flower bud, old (9) ms1-ttg, flower bud, young (9) myb61, seedling (15) myb61, seedling, sucrose (15) MYB61o, seedling (15) MYB61o, seedling, sucrose (15) nahG, senescing leaf (60) o1, seedling (46) o1, seedling, H202, 3h (46) pasta2M1, mature leaf (150) pho1, mature leaf (61) pho3, leaf (27) pmr4, mature leaf, Erysiphe cichoracearum (85) pmr4, mature leaf (85) RALF1o, seedling (152) rbohB, seedling (59) rbohB, seedling, 30°C, 1h (59) rbohB, seedling, 40°C, 1h (59) rbohC, root, elongation zone (79) rdo, fresh seeds (96) rhd2, lateral roots (29) sfr2, whole rosette, 4°C (58) sfr2, whole rosette (58) sfr2-1, whole rosette, 4°C, 24h (12) sfr2-1, whole rosette, 4°C, 24h (12) sfr3, whole rosette, 4°C (58) sfr3, whole rosette (58) sfr6, whole rosette, 4°C (58) sfr6, whole rosette (58) sfr6, whole rosette, drought (58) sfr6, seedling (76) sfr6, seedling, 4°C (76) sfr6, suspension cell, light (153) sfr6, suspension cell, dark (153) sph1, leaves, stage 5 (145) sph1, leaves, stage 14 (145) tcp13, flowers (100) tcp14, flowers (100) ttg, flower bud, old (9) ttg, flower bud, young (9) ufo1, shoot apex (89) ufo1, flower (89) gun1-gun5, seedling, far red then white light (83) gun1-gun5, seedling, dark then white light (83) zorro, seedlings, control, 2h (103) zorro, seedlings, control 24h, (103) zorro, seedlings, zearalenone, 2h (103) zorro, seedlings, zearalenone, 24h (103) Locus Probeset Name Description Annotation score GO.keywords FunCat keywords AraCyc annotations KEGG annotations BioPath annotations AcylLipid category Literature annotations Gene family 90% quantile of DE max. DE
At4g15440 1.000 HPL1, CYP74B2 Encodes a hydroperoxide lyase. Also a member of the CYP74B cytochrome p450 family. 0.87 0.23 -0.33 -0.23 -1.12 0.24 -0.57 -0.25 0.18 -0.23 -0.23 -0.23 -0.23 -1.76 -0.22 -0.42 0.4 0.79 1.39 -0.5 -0.79 1.31 -0.15 0.78 0.7 -0.26 -0.13 0.51 0.13 -0.26 -0.83 -0.09 0.53 -0.23 -1.26 -0.8 -0.01 -0.23 -0.23 -0.23 -0.23 -0.23 -0.23 -0.88 -0.19 0.02 -0.54 -0.89 -0.26 -0.28 0.25 0.33 -0.23 0.8 0.69 0.36 0.17 -0.28 -0.07 1.46 1.5 1.56 1.44 -0.23 0.43 -0.05 -0.02 0.59 0.27 0.28 -0.49 0.34 0.99 -0.63 -0.04 -0.23 -0.65 0.86 0.68 0.49 0.2 -0.13 -0.23 -0.23 -0.23 -0.64 -1.41 0.02 -0.54 -0.16 -0.27 -0.05 -0.36 -0.52 -0.14 -0.2 0.04 0.23 -0.23 -0.23 -0.23 -0.23 0.91 -0.23 -0.23 0.35 -0.23 0.27 0 -0.13 -0.23 -0.13 -1.55 1.18 -0.46 0.09 -0.23 -0.19 -0.03 0.03 -0.76 -0.61 -0.18 -0.43 0.19 4.04 -0.23 -1.26 -0.23 -0.04 -0.2 -0.73 -0.15 -0.4 0.01 0.17 -0.26 0.15 -0.23 -0.23 1.1 1.44 0.82 1.12 At4g15440 245253_at HPL1, CYP74B2 Encodes a hydroperoxide lyase. Also a member of the CYP74B cytochrome p450 family. 10
lipid, fatty acid and isoprenoid metabolism lipoxygenase pathway

Lipid signaling oxylipin pathway cytochrome P450 family, hydroperoxide lyase, oxylipin biosynthesis 2.16 5.80
At1g19570 0.607
Similar to dehydroascorbate reductase from Oryza sativa 0.33 -0.64 -0.37 0.21 -0.2 0.12 -0.5 0.25 0.38 0.12 -0.24 0.03 -0.13 -0.3 0.06 -0.06 0.19 0.04 -0.07 0.01 -0.09 0.69 0.81 0.13 -0.01 0.09 0.36 -0.08 -0.09 -0.07 -0.19 0.76 0.99 -0.12 -0.18 -0.03 0.39 0.02 -0.44 -0.04 -0.04 -0.04 -0.04 -0.8 0.19 0.15 -0.56 -0.45 -0.45 -0.47 -0.32 -0.28 0.24 0.34 0.82 0.26 0.32 -0.11 0.26 0.18 0.42 0.53 0.56 -0.4 -0.23 -0.01 -0.22 -0.43 -0.07 -0.07 0.04 0.07 0.39 0.26 -0.25 -0.14 -1.09 -0.8 0.17 -0.01 -0.26 -0.05 -0.76 -0.34 0.02 0.16 -0.4 -0.13 -1.88 -2.04 -0.23 -0.41 -0.2 0.08 0.21 0 0.27 0.7 -0.38 0.21 -0.2 -0.32 0.83 0.28 0.42 0.27 -0.6 0.24 -0.25 -0.11 -1.12 0.03 -0.24 -0.06 0.37 -0.41 1.12 -0.01 -0.71 -0.28 -1.26 -0.16 0.37 -0.09 0.28 7 -0.46 -0.78 -0.04 -1.31 -0.25 -0.41 -0.19 -0.04 0.37 0.51 0.37 0.15 0.05 -0.35 0.76 0.44 0.65 0.55 At1g19570 261149_s_at
Similar to dehydroascorbate reductase from Oryza sativa 2

ascorbate glutathione cycle



Glutathione S-transferase, Dehydroascorbate reductase family 1.54 9.04
At5g56760 0.599 ATSERAT1;1 Encodes a cytosolic serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system. -0.1 0.16 -0.04 0.44 -0.08 -0.11 -0.43 0.03 0.19 -0.14 -0.13 0.06 -0.13 -0.12 -0.14 0.03 -0.07 0.04 0.01 -0.37 -0.19 -0.33 0.12 0.06 0.34 0.14 0.07 0.1 0.32 0.07 -0.06 0.26 0.79 -0.08 0.09 -0.2 0.21 -0.11 -0.14 -0.06 -0.06 -0.06 -0.06 -0.64 -0.35 -0.03 -0.21 -0.25 -0.28 -0.19 -0.37 -0.18 0.27 -0.17 0.94 -0.01 0.21 -0.05 0.14 0.28 0.43 0.56 0.62 0.35 0.07 0.14 0 0.04 0.1 0.19 0.22 -0.23 0.02 -0.33 -0.5 -0.06 -0.5 -0.16 -0.11 -0.14 0.09 0.05 0.02 -0.25 0.16 -0.15 -0.21 -0.14 -0.61 -0.38 0.01 0 -0.11 0.21 0.06 -0.03 -0.04 0.18 -0.34 -0.28 -0.04 0.01 0.49 -0.48 0.2 0.21 0.37 0.04 -0.03 -0.28 0.04 -0.2 -0.2 -0.3 -0.07 0.1 0.07 -0.03 -0.05 -0.36 -0.35 -0.2 -0.18 -0.05 -0.17 2.9 -0.28 -0.08 -0.06 -0.21 -0.3 -0.05 -0.13 0.07 0.07 0.21 -0.01 -0.03 0.13 0.14 0.23 0.25 0.15 0.07 At5g56760 247982_at ATSERAT1;1 Encodes a cytosolic serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system. 6 serine O-acetyltransferase activity nitrogen and sulfur metabolism cysteine biosynthesis I | sulfate assimilation III Sulfur metabolism | Cysteine metabolism Biosynthesis of Amino Acids and Derivatives | Glutathione metabolism


0.80 3.54
At4g35630 0.559 PSAT Encodes a protein with similarity to 3-phosphoserine aminotransferase which is involved in serine biosynthesis in the chloroplast which operates via the phosphorylated pathway. 0.13 0.03 -0.11 -0.56 -0.21 -0.16 0.13 -0.11 0.1 -0.12 -0.43 -0.09 0.01 -0.21 -0.45 -0.01 0.08 0.05 0.02 -0.41 -0.21 0.89 0.95 0.32 -0.02 -0.3 -0.13 -0.06 -0.27 0.08 -0.62 -0.34 0.26 -0.27 -0.57 -0.34 -0.28 -0.09 -0.3 -0.07 -0.07 -0.07 -0.07 -0.69 0.62 -0.28 0.05 -0.15 0.07 -0.07 0.08 0.18 -0.43 -0.24 -0.04 -0.18 -0.17 -0.1 0.27 0.13 0.34 -0.02 0.23 -0.72 0.35 0.47 0.55 0.45 0.36 0.21 -0.23 -0.22 -0.22 -0.67 -0.27 -0.6 0.07 -0.34 -0.45 -0.01 -0.27 -0.18 -0.79 -0.07 -0.13 0.54 -0.13 0.24 -0.15 0.11 -0.28 0.12 -0.03 -0.14 -0.14 -0.1 0 0.75 -0.02 -0.13 -0.11 0.39 0.33 -0.28 -0.19 0.18 1.41 0.59 -0.05 0.16 -0.04 -0.37 -0.37 -0.3 0.05 -0.3 0.22 0.1 -0.56 0.47 -0.07 0.18 -0.02 0.1 0.27 3.81 0.19 -0.12 -0.07 0.62 -0.49 -0.41 -0.43 -0.31 0.52 0.83 -0.28 -0.28 -1.13 -0.61 0.4 0.97 0.72 0.71 At4g35630 253162_at (m) PSAT Encodes a protein with similarity to 3-phosphoserine aminotransferase which is involved in serine biosynthesis in the chloroplast which operates via the phosphorylated pathway. 4
amino acid metabolism
Glycine, serine and threonine metabolism | Vitamin B6 metabolism



1.31 4.95
At4g35640 0.559
Encodes a cytosolic serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system. Expression is induced in both roots and shoots under sulfur-starved conditions. 0.13 0.03 -0.11 -0.56 -0.21 -0.16 0.13 -0.11 0.1 -0.12 -0.43 -0.09 0.01 -0.21 -0.45 -0.01 0.08 0.05 0.02 -0.41 -0.21 0.89 0.95 0.32 -0.02 -0.3 -0.13 -0.06 -0.27 0.08 -0.62 -0.34 0.26 -0.27 -0.57 -0.34 -0.28 -0.09 -0.3 -0.07 -0.07 -0.07 -0.07 -0.69 0.62 -0.28 0.05 -0.15 0.07 -0.07 0.08 0.18 -0.43 -0.24 -0.04 -0.18 -0.17 -0.1 0.27 0.13 0.34 -0.02 0.23 -0.72 0.35 0.47 0.55 0.45 0.36 0.21 -0.23 -0.22 -0.22 -0.67 -0.27 -0.6 0.07 -0.34 -0.45 -0.01 -0.27 -0.18 -0.79 -0.07 -0.13 0.54 -0.13 0.24 -0.15 0.11 -0.28 0.12 -0.03 -0.14 -0.14 -0.1 0 0.75 -0.02 -0.13 -0.11 0.39 0.33 -0.28 -0.19 0.18 1.41 0.59 -0.05 0.16 -0.04 -0.37 -0.37 -0.3 0.05 -0.3 0.22 0.1 -0.56 0.47 -0.07 0.18 -0.02 0.1 0.27 3.81 0.19 -0.12 -0.07 0.62 -0.49 -0.41 -0.43 -0.31 0.52 0.83 -0.28 -0.28 -1.13 -0.61 0.4 0.97 0.72 0.71 At4g35640 253162_at (m)
Encodes a cytosolic serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system. Expression is induced in both roots and shoots under sulfur-starved conditions. 6 serine O-acetyltransferase activity | sulfate assimilation nitrogen and sulfur metabolism cysteine biosynthesis I | sulfate assimilation III
Biosynthesis of Amino Acids and Derivatives | Glutathione metabolism


1.31 4.95
At3g27400 0.552
pectate lyase family protein 0.16 -0.08 -0.08 1 -0.71 0.08 -0.69 0.04 -0.1 -0.64 -0.79 -0.08 -0.56 -0.11 0.01 -0.44 0.21 -0.24 -0.31 -0.26 -0.83 -0.11 -0.31 0.98 1.87 -0.2 -0.26 0.01 0.25 -0.08 0.06 -0.08 -0.08 -0.08 -0.21 0.04 0.01 -0.69 -1.32 -0.08 -0.08 -0.08 -0.08 -1.55 0.2 -0.19 -0.44 -1.08 0.09 -0.9 -0.27 0.49 -0.35 0.33 -0.08 -0.14 -0.14 0.48 0.17 0.92 1.02 1.02 1.54 0.21 0.54 -0.35 0.69 -0.07 -0.56 -0.12 -0.25 -0.07 -0.28 -0.08 -0.08 -0.97 -0.08 -0.08 -0.08 -0.08 -0.12 -0.08 -1.25 -0.76 -0.3 -1.92 -0.26 -0.08 0.38 0.24 -0.28 -0.03 0.04 -0.3 -0.42 -0.08 -0.31 -0.06 -0.59 -0.31 -0.38 0.03 3.65 -0.08 -0.08 0.26 4.13 -0.08 -0.14 0.11 -0.08 -0.01 -0.28 -0.08 -0.08 -0.08 -0.08 0.12 -0.08 -0.3 -0.91 -0.04 -0.43 -0.08 0.24 3.73 -0.08 -0.77 -0.08 -0.08 -1.03 -0.51 -0.37 1.01 0 -0.08 0.04 -0.03 -0.08 -0.08 0.57 1.32 1.5 1.97 At3g27400 257735_at
pectate lyase family protein 4



Cell Wall Carbohydrate Metabolism | pectin metabolism


2.19 6.05
At5g63980 0.551 SAL1 encodes a bifunctional protein that has 3'(2'),5'-bisphosphate nucleotidase and inositol polyphosphate 1-phosphatase activities and rescues sulfur assimilation mutants in yeast. It is involved in the response to cold, drought, and ABA. Mutants in this ge 0.24 0.28 0.2 0.72 0.06 -0.24 0.43 0.07 -0.16 -0.12 0.13 -0.28 0.07 -0.22 -1.07 0.05 -0.21 0.28 -0.43 -0.51 -0.7 0.66 0.46 0.32 0.02 -0.48 -0.1 -0.02 -0.14 -0.11 -0.39 -0.16 0.33 0.19 -0.06 0.03 -0.1 -0.34 -0.65 -0.06 -0.06 -0.06 -0.06 -0.17 1.35 0.32 -0.15 -0.05 -0.1 0.2 -0.05 0.1 -0.24 -0.17 0.3 0.11 0.16 0 0.24 0.48 0.53 0.32 0.56 0.34 -0.03 -0.2 -0.11 0 -0.01 -0.03 -0.18 -0.25 0.02 -0.12 -0.38 -0.01 -0.05 0.56 -0.19 0.03 -0.36 -0.3 -0.59 -0.24 -0.26 -0.01 -0.2 -0.04 -0.42 -0.46 -0.04 -0.36 -0.34 -0.07 -0.16 -0.11 0.2 0.78 -0.12 -0.02 0.11 -0.04 0.16 -0.06 -0.63 0.15 -0.11 -0.11 -0.26 0.14 -0.32 0.04 -0.65 -0.2 0.33 -0.35 0.92 0.26 0.12 -0.19 -0.3 0.03 -0.02 0.07 0.41 4.25 0.25 0.01 -0.06 0.32 -0.92 -0.27 -0.26 -0.25 0.3 0.24 0.18 -0.64 -0.44 -0.62 0.14 0.23 0.19 0.01 At5g63980 247313_at SAL1 encodes a bifunctional protein that has 3'(2'),5'-bisphosphate nucleotidase and inositol polyphosphate 1-phosphatase activities and rescues sulfur assimilation mutants in yeast. It is involved in the response to cold, drought, and ABA. Mutants in this ge 9 3'(2'),5'-bisphosphate nucleotidase activity | inositol or phosphatidylinositol phosphatase activity | negative regulation of transcription | sulfur metabolism | response to cold | response to abiotic stimulus | abscisic acid mediated signaling | negative regulation of signal transduction | phosphoinositide-mediated signaling stress response
Inositol phosphate metabolism | Sulfur metabolism | Signal Transduction | Phosphatidylinositol signaling system



1.17 5.32
At1g22450 0.541 COX6B cytochrome c oxidase subunit 6b 0.05 0.24 -0.07 0.25 -0.22 -0.05 -0.07 0.04 0.05 -0.23 -0.09 0.07 -0.11 -0.06 -0.37 0.1 0.16 0.13 0.08 -0.21 -0.23 -0.02 -0.24 0.27 0.53 0.03 -0.21 -0.06 0.01 -0.11 -0.13 -0.15 0.09 -0.1 -0.06 -0.07 0.01 -0.06 -0.24 -0.07 -0.07 -0.07 -0.07 -0.25 0.13 0.09 -0.04 0.13 0.07 0.37 0.01 -0.19 -0.19 0.02 0 0.06 0.21 -0.23 0 0.08 -0.11 0.11 0 0.6 0.34 0.41 0.31 0.34 0.3 0.45 -0.13 -0.23 -0.21 0.08 -0.32 -0.03 0.56 0.32 -0.13 -0.05 -0.04 -0.34 -0.55 -0.28 -0.18 0.28 -0.56 -0.1 -0.79 -0.81 -0.05 -0.05 -0.15 -0.09 -0.03 -0.04 -0.09 0.1 -0.49 -0.23 -0.27 -0.52 0.1 0.04 0.2 0.07 -0.07 -0.05 -0.28 -0.13 -0.13 -0.05 -0.11 0.01 -0.06 0.13 -0.1 -0.13 -0.54 -0.51 -0.41 -0.08 -0.18 -0.27 0.16 6.15 -0.02 0.02 -0.07 0.23 -0.35 0.16 -0.11 -0.05 0.07 0.17 0.13 0.02 -0.15 -0.19 0.07 -0.16 0.04 0.11 At1g22450 261939_at COX6B cytochrome c oxidase subunit 6b 6


Oxidative phosphorylation



0.81 6.96
At1g74090 0.535
sulfotransferase family protein, similar to Flavonol 4'-sulfotransferase (Flaveria chloraefolia) 0.11 0.54 -0.12 0.87 0.22 0.12 0.3 -0.55 1.25 -0.11 -0.07 -0.17 -0.14 -0.9 0.09 -0.81 0.03 -0.64 1.17 -0.36 -0.65 1.06 0.09 0.64 -0.95 -0.22 0.08 -0.01 0.09 0.01 -0.31 -0.07 0.23 -0.08 -0.56 -0.04 1.63 0.2 -0.34 -0.12 -0.12 -0.12 -0.12 -0.4 0.6 0.62 -0.23 0.01 -0.33 -0.02 -0.15 0.02 -0.02 -0.37 -0.02 0.16 0.2 -0.15 0.49 1.29 2.31 2.83 3.63 0.39 -0.74 -0.52 -1.15 -0.77 -0.81 -0.42 -0.42 -0.05 0.86 -0.67 -0.93 0.15 -0.36 0.27 0.82 -1.87 -0.01 -0.27 -0.12 -0.12 0.03 -1.01 -0.51 0.94 -1.59 -2.29 -1.02 -0.71 -0.32 0.86 0.56 0.41 0.35 0.95 -1.07 -0.34 -1.07 -1.04 -0.19 -0.12 0.74 0.11 -1.28 -0.45 -0.25 0.1 -0.81 -0.02 -0.54 0.12 0.35 -0.12 1.18 0.17 0.51 -0.5 -0.77 -0.3 0.21 0.06 0.47 4.03 0.25 -0.32 -0.12 -0.4 -0.43 -0.27 -0.25 -0.39 0.4 0.66 -0.81 1.28 0.08 0.23 -0.35 -0.39 0.32 -0.22 At1g74090 260385_at
sulfotransferase family protein, similar to Flavonol 4'-sulfotransferase (Flaveria chloraefolia) 10



Phenylpropanoid Metabolism | Flavonoid and anthocyanin metabolism
Glucosinolate Metabolism
2.28 6.33
At4g11010 0.531 NDPK3 nucleoside diphosphate kinase 3, mitochondrial 0.18 0.36 0 0.78 -0.33 0.01 0.22 -0.07 -0.21 -0.02 0.17 -0.19 -0.1 -0.46 -0.56 0.03 -0.15 0.27 -0.06 -0.03 -0.08 0.77 0.25 -0.08 0.4 0.01 -0.19 -0.12 -0.2 -0.06 -0.3 -0.39 -0.25 -0.03 -0.09 -0.31 0.08 -0.19 -0.28 -0.05 -0.05 -0.05 -0.05 -0.61 0.16 -0.17 -0.22 -0.11 0.26 0.02 -0.15 -0.08 -0.28 -0.15 -0.12 0.02 0.08 -0.14 -0.11 0.36 0.22 -0.17 0.51 0.5 -0.25 -0.17 -0.09 -0.53 -0.23 -0.05 0.06 -0.14 -0.15 -0.48 -0.38 -0.21 0.56 1.14 -0.06 0.13 -0.17 -0.01 -1.25 -0.67 0.07 0.27 0.31 -0.15 -0.74 -0.94 -0.08 -0.47 0.07 -0.23 0.07 0.28 0.1 0.41 -0.34 0.26 -0.08 0.59 0.31 -0.19 0.03 0.04 -0.01 0.1 -0.18 0.14 0.11 -0.11 -0.3 0.15 0.1 -0.31 0.2 -0.25 -0.2 0.73 0.4 0.01 -0.06 -0.12 0.18 4.84 0.24 0.09 -0.05 0.67 -0.26 -0.15 -0.57 -0.63 0.35 0.49 0.17 -0.39 -0.91 -0.57 0.12 0.33 0.19 0.42 At4g11010 254958_at NDPK3 nucleoside diphosphate kinase 3, mitochondrial 6
regulation of nucleotide metabolism de novo biosynthesis of purine nucleotides I | de novo biosynthesis of pyrimidine ribonucleotides Nucleotide Metabolism | Purine metabolism | Pyrimidine metabolism



1.14 6.08
At3g54950 0.519
low similarity to patatin(Solanum tuberosum) -0.03 0.05 0.17 -0.25 -0.03 -0.44 -0.03 0.23 0.02 -0.05 -0.22 -0.1 -0.21 -0.88 -0.66 -0.16 -0.42 0.38 -0.21 -0.03 -0.03 0.02 0.15 -0.03 -0.03 -0.03 0.59 0.28 -0.03 -0.03 -0.03 -0.03 -0.03 -0.03 -0.87 -0.03 -0.88 -0.28 -0.18 -0.03 -0.03 -0.03 -0.03 -0.32 -0.03 -0.39 -0.03 -0.03 0.39 -0.03 -0.03 -0.03 -0.03 -0.32 -0.03 0.05 -0.14 -0.03 -0.28 0.26 0.84 0.84 1.01 -0.5 0.05 0.36 0.46 0.14 0.3 0.08 0.48 -0.03 -0.01 -0.03 -0.03 -0.51 -0.03 -0.03 -0.03 -0.03 -0.03 -0.03 -0.03 -0.03 -0.17 0.62 0.04 -0.03 -0.03 -0.03 -0.17 -0.16 0.14 0.41 0.49 0.19 0.23 0.2 -0.12 -0.51 -0.12 -0.51 -0.32 -0.03 -0.03 -0.03 -0.03 -0.03 0.05 -0.03 -0.03 -0.62 -0.03 -0.03 -0.06 1.06 -0.41 -0.11 -0.37 -0.03 -0.03 0.55 -0.03 -0.13 -0.03 3.05 -0.03 -0.87 -0.03 -0.31 -0.03 0.1 -0.03 -0.03 0.02 0.28 0.01 -0.72 -1.17 0.93 -0.2 0.8 0.61 0.22 At3g54950 251839_at
low similarity to patatin(Solanum tuberosum) 2




Lipid signaling

1.21 4.22
At4g22753 0.510 SMO1-3 Encodes a member of the SMO1 family of sterol 4alpha-methyl oxidases. 0.76 -0.47 -0.74 -1.04 -0.37 0.4 0.01 0.34 -0.71 -0.01 -0.01 -0.01 -0.01 -0.66 -0.03 -0.36 -0.56 -0.08 -1.05 0.12 0.08 0.53 -0.28 -0.09 -0.09 -0.23 -0.22 0.4 -0.4 0.03 -0.07 -0.01 -0.01 -0.2 -0.06 -0.12 -0.15 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 -1.52 -0.01 -0.19 -0.28 -0.55 -0.22 -0.42 0.05 -0.4 -0.52 -0.5 -0.01 0.56 0.35 0.18 -0.13 1.31 0.33 0.11 0.78 -1.65 -0.09 -0.07 0.02 -0.02 0.21 -0.19 -1.21 0.48 0.17 -0.01 0.66 0.22 -0.01 -1.24 -0.01 -0.01 -0.01 0.26 -0.01 -0.01 0.28 -0.04 0.04 -0.05 -1.04 -1.04 0.33 -1.5 0.55 0.02 -0.26 0.55 0.01 -0.71 -0.01 -0.01 -0.01 -0.01 -1.52 -0.01 -0.01 0.43 -0.44 0.35 0.01 0.1 0 0.04 0.02 0.04 -0.01 0.31 -0.01 0.04 1.85 0.07 0.38 -0.04 -0.17 -0.24 0.12 6.15 -0.12 -0.39 -0.01 0.6 0.28 0.62 -1.02 -1.02 0.39 0.37 -0.07 -1.02 0.24 0.19 1.36 1.54 1.44 1.06 At4g22753 254333_at SMO1-3 Encodes a member of the SMO1 family of sterol 4alpha-methyl oxidases. 6



Isoprenoid Biosynthesis in the Cytosol and in Mitochondria | sterol biosynthesis


1.81 7.80
At1g23190 0.509
Strong similarity to Phosphoglucomutase, cytoplasmic 2 (EC 5.4.2.2) (Glucose phosphomutase 2) (PGM 2) from Zea mays 0.16 0.2 -0.04 1.11 -0.15 -0.06 0.19 0.05 0.27 -0.28 -0.34 0.18 0.08 -0.1 0.04 0.03 0.24 0.22 0.32 -0.06 -0.02 0.51 0.63 0.5 0.05 -0.33 -0.37 -0.17 -0.26 -0.08 -0.11 0.06 0.14 -0.13 0 0 0.79 0.09 -0.27 -0.08 -0.08 -0.08 -0.08 0.04 -0.06 -0.26 -0.16 -0.02 0.13 -0.03 0.11 0.07 -0.24 -0.4 0.32 -0.06 -0.08 -0.21 -0.04 0.36 0.35 0.14 0.36 0.75 0.01 0.22 0.18 0.11 0.23 0.11 -0.35 -0.12 -0.03 -0.28 -0.12 -0.19 -0.01 0.37 0 -0.11 -0.02 -0.02 -0.54 -0.18 -0.14 0.34 0.13 -0.27 -0.48 -0.56 -0.05 -0.21 0 0 0.08 0.02 -0.08 -0.12 -0.62 -0.42 -0.94 -0.74 0.23 -0.12 0.19 0.09 0.15 0.39 -0.03 -0.13 0.01 -0.18 -0.06 -0.11 -0.14 -0.24 -0.15 -0.14 -0.32 -0.4 -0.11 -0.04 0.06 -0.14 0.16 3.66 0.35 0.32 -0.08 0.37 -0.46 -0.55 -0.35 -0.27 0.2 -0.09 0.06 0.19 -1.12 -0.55 -0.52 0.18 0.6 0.11 At1g23190 264903_at
Strong similarity to Phosphoglucomutase, cytoplasmic 2 (EC 5.4.2.2) (Glucose phosphomutase 2) (PGM 2) from Zea mays 6
C-compound and carbohydrate metabolism | glycolysis and gluconeogenesis starch biosynthesis | trehalose biosynthesis III | glucose and glucose-1-phosphate degradation | lactose degradation IV Glycolysis / Gluconeogenesis | Pentose phosphate pathway | Galactose metabolism | Starch and sucrose metabolism | Streptomycin biosynthesis Intermediary Carbon Metabolism | Gluconeogenesis from lipids in seeds


1.01 4.79
At4g20330 0.507
transcription initiation factor-related 0.08 0.09 -0.34 -0.46 -0.18 0.02 -0.13 -0.19 -0.2 0.31 0.07 -0.12 0.34 -0.12 -0.35 0.01 -0.08 0.31 0.07 0.01 -0.34 0.45 0.56 -0.61 0.04 0.2 -0.02 -0.07 0.01 0.05 -0.03 0.19 -0.56 0.04 0.03 -0.01 -0.01 0.05 0.33 -0.05 -0.05 -0.05 -0.05 -0.47 -0.12 -0.18 -0.17 -0.11 -0.14 -0.31 -0.09 -0.3 -0.31 0.12 0.47 0.31 0.04 -0.14 0.14 0.32 0.21 0.37 0.28 -0.32 0.01 0.27 0.15 -0.17 0.22 0.06 -0.64 0.07 0.27 -0.75 -0.47 -0.02 -0.16 -1.28 0.19 -0.95 0.06 -0.11 -0.12 0.02 -0.02 0.4 -0.46 -0.17 -0.24 -0.28 -0.08 -0.3 -0.16 -0.34 0.41 0.14 0.13 -0.5 -0.13 -0.08 0.66 0.34 0.07 -0.14 -0.24 0.03 -0.47 0.4 0.13 0 -0.06 -0.42 0.18 0.62 -0.17 -0.01 -0.22 -0.06 -0.44 0.27 0.31 0.06 -0.1 0.08 0.05 4.67 0.3 0.12 -0.05 -0.04 0.33 -0.17 0.42 -0.21 -0.03 -0.17 -0.03 -0.22 -0.28 0.07 -0.06 0.12 0.28 0.24 At4g20330 254478_at
transcription initiation factor-related 2
transcription | RNA synthesis | mRNA synthesis | general transcription activities
Transcription | Basal transcription factors



0.88 5.95
At5g67590 0.507 FRO1 Mutant leaves have a reduced capacity for cold acclimation, appear water-soaked, leak electrolytes, and accumulate reactive oxygen species constitutively. Encode a protein with high similarity to the 18-kD Fe-S subunit of complex I (NADH dehydrogenase -0.09 0.21 -0.04 0.15 -0.23 -0.01 0.19 -0.09 -0.17 -0.04 0.1 0.08 -0.05 -0.39 -0.67 -0.12 -0.37 -0.05 -0.23 -0.11 0.1 0.23 0.17 0.2 0.36 -0.19 -0.16 -0.04 -0.07 -0.19 -0.04 -0.44 -0.28 0.11 -0.09 -0.19 -0.16 0 -0.3 0 0 0 0 -0.02 0.16 0.14 0.01 -0.19 0.18 0.27 0.13 -0.02 -0.01 0.3 -0.02 0.23 0.18 -0.18 -0.01 0.1 -0.03 0.03 -0.11 -0.13 -0.39 -0.19 -0.41 -0.5 -0.22 -0.39 -0.06 0 -0.19 0.15 -0.01 -0.05 0.59 1.04 -0.41 -0.11 0.04 0.3 -0.38 -0.25 -0.11 0.26 -0.26 0.15 -1.02 -1.02 -0.18 -0.26 0.06 0.11 0.04 0.09 0.08 0.4 -0.32 0.27 -0.14 0.07 0.32 0.09 -0.05 -0.01 -0.16 0.09 -0.03 0.01 0.18 -0.2 -0.08 0.24 -0.01 0.17 -0.05 0.15 0.4 0.1 -0.12 0.02 0.06 -0.01 0.09 5.67 0.28 -0.09 0 0.26 -0.26 -0.16 -0.22 -0.21 0 0.08 -0.11 -0.44 -0.46 -0.82 -0.04 0.27 -0.03 0.15 At5g67590 247011_at FRO1 Mutant leaves have a reduced capacity for cold acclimation, appear water-soaked, leak electrolytes, and accumulate reactive oxygen species constitutively. Encode a protein with high similarity to the 18-kD Fe-S subunit of complex I (NADH dehydrogenase 4 cold acclimation | response to osmotic stress
aerobic respiration -- electron donors reaction list Oxidative phosphorylation



0.74 6.68
At2g20360 0.504
expressed protein 0.18 0.23 0.2 0.46 0.05 -0.15 0.19 0.15 0.1 -0.42 0.02 -0.18 -0.16 -0.07 -0.35 0.18 -0.02 0.17 0.01 -0.03 -0.09 -0.1 0.03 0.1 -0.15 -0.02 0.08 -0.18 0.1 0.07 0.01 0.08 -0.11 0.13 -0.17 -0.04 -0.16 -0.14 -0.23 -0.07 -0.07 -0.07 -0.07 -0.23 0.04 -0.03 -0.14 0.12 -0.27 0.62 -0.01 0.1 -0.28 -0.28 -0.04 0.08 -0.12 -0.17 0.01 0.15 0.03 -0.07 0.04 0.18 0.59 0.34 0.1 0.3 0.37 0.5 0.05 -0.06 -0.12 -0.01 -0.1 -0.32 0.53 0.43 -0.34 -0.35 0.1 -0.09 -0.6 -0.22 -0.02 0.06 -0.25 0.04 -0.89 -0.96 -0.05 -0.09 0.03 -0.22 -0.51 0.08 -0.13 0.2 -0.5 -0.53 -0.41 -0.37 -0.01 0.02 0.07 0.05 -0.56 0.01 -0.12 -0.13 0.07 0.35 -0.16 0.33 -0.07 0.04 -0.13 -0.23 0.08 -0.39 -0.23 -0.19 -0.06 -0.04 -0.08 6.4 0 -0.04 -0.07 0.03 -0.12 -0.08 -0.04 -0.07 0.1 0.3 0.03 -0.27 -0.13 -0.18 0.14 -0.31 0.05 -0.18 At2g20360 265286_at
expressed protein 1

dTDP-rhamnose biosynthesis Oxidative phosphorylation



0.79 7.36
At1g78380 0.502 ATGSTU19 encodes a glutathione transferase that is a member of Tau GST gene family. Expression is induced by drought stress, oxidative stress, and high doses of auxin and cytokinin. naming convention according to Wagner et al. (2002) 0.08 -0.18 -0.59 -0.66 -0.12 -0.09 0.27 0.12 0.32 0 -0.05 -0.13 -0.24 0.22 -0.04 0.39 -0.13 0.56 -0.01 -0.05 -0.17 0.26 -0.16 -0.07 -0.17 -0.17 -0.39 -0.03 -0.27 -0.07 -0.03 -0.27 -0.34 -0.28 0.09 0.37 0.18 -0.54 -0.11 -0.1 -0.1 -0.1 -0.1 -0.36 -0.2 0.14 -0.23 -0.34 -0.07 -0.08 -0.19 -0.28 -0.04 0.22 -0.02 -0.06 0.05 0.18 0.25 0.12 0.21 0.2 0.31 -0.76 -0.3 -0.23 -0.3 -0.4 -0.26 -0.01 -0.01 -0.04 0.04 0.14 -0.1 -0.14 -0.53 0.11 -0.13 -0.23 -0.11 -0.35 -0.32 -0.11 -0.1 0.46 -0.19 0.04 -0.19 -0.3 0.16 0.01 -0.1 0.01 -0.06 -0.07 -0.13 0.2 0.03 0.19 -0.21 -0.02 -0.01 -0.33 0.1 0 0.03 -0.01 0.04 -0.01 -0.14 -0.04 0.08 0.04 0 0.05 0.14 -0.27 -0.24 0.15 0.19 -0.05 -0.13 -0.11 -0.18 8.16 -0.06 0.2 -0.1 0.08 -0.01 -0.19 -0.07 0.24 0.23 0.11 0.17 0.05 -0.52 -0.21 -0.02 -0.14 0.25 -0.1 At1g78380 260746_at ATGSTU19 encodes a glutathione transferase that is a member of Tau GST gene family. Expression is induced by drought stress, oxidative stress, and high doses of auxin and cytokinin. naming convention according to Wagner et al. (2002) 1 response to oxidative stress | cellular response to water deprivation | toxin catabolism





Glutathione S-transferase, Tau family 0.65 8.91
At1g51680 0.501 4CL1 encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. In addition to 4-coumarate, it also converts ferulate. -0.39 0.22 0.45 -0.23 -0.06 -0.22 0.94 0.28 -0.17 -0.3 -0.17 -0.15 -0.18 -0.65 -0.25 -0.09 -0.38 0.18 -0.79 -0.33 -0.33 0.62 0.6 0.31 0.18 -0.61 -0.92 -0.19 -0.35 -0.14 -0.84 -0.03 -0.14 0.04 -0.4 0.06 0.23 -0.22 -0.57 -0.09 -0.09 -0.09 -0.09 0.2 -0.9 0.18 0.04 0.02 0.05 -0.21 0.06 -0.01 0.28 0.24 -0.34 -0.15 -0.24 -0.03 -0.05 1.05 0.92 0.81 1.31 0.01 0.06 0.15 0.07 0.1 -0.05 0.06 -0.32 -0.16 0.48 -0.16 -0.27 0.08 0.42 -0.11 -0.73 -0.49 -0.01 0.06 -0.31 0.28 -0.09 -0.13 0.45 -0.85 -2.15 -1.7 0.51 -0.19 0.03 0.13 0.12 0.5 0.14 -0.07 -0.4 -0.23 -0.4 -0.05 0.01 -0.37 -0.01 0.04 2.75 -0.05 -0.1 0.02 -1.27 -0.05 -0.28 -0.21 -0.04 -0.45 -0.04 -0.03 0.74 -0.02 0.03 -0.16 -0.16 -0.37 0.09 6.07 -0.02 0.01 -0.09 0.87 -0.1 -0.06 0.01 0.21 0.49 0.51 0.12 -0.68 -0.94 -0.96 0.48 0.63 0.23 0.47 At1g51680 256186_at 4CL1 encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. In addition to 4-coumarate, it also converts ferulate. 10 4-coumarate-CoA ligase activity | response to UV | response to pathogenic fungi | response to wounding | phenylpropanoid metabolism
lignin biosynthesis | flavonoid biosynthesis Stilbene, coumarine and lignin biosynthesis Phenylpropanoid Metabolism | core phenylpropanoid metabolism
Phenylpropanoid pathway Acyl activating enzymes , CoA ligases, clade IV, 4-coumarate-CoA ligase 1.65 8.22
At1g63970 0.501 ISPF similar to 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase from Catharanthus roseus 0 0.01 0.03 -0.01 0.05 -0.05 0.32 0.16 0.21 0.28 0.06 0.39 0.01 0 -0.14 -0.14 -0.18 0.07 0.32 0.04 -0.1 -0.01 0.07 0.28 -0.18 -0.24 -0.42 -0.03 -0.38 -0.13 -0.03 -0.27 -0.07 -0.1 0.03 -0.38 -0.01 -0.04 -0.27 -0.06 -0.06 -0.06 -0.06 0.32 -0.11 -0.07 0.02 0.38 0.09 0.27 -0.06 0.09 -0.08 -0.08 0 0.08 0.06 0.02 0.13 0.43 0.23 0.43 0.34 -0.56 -0.14 -0.05 -0.32 -0.34 -0.2 -0.15 -1.49 -0.08 0.14 0.01 -0.09 0.6 0.73 0.89 -0.14 0.06 -0.11 0.17 0.04 0.05 -0.15 -0.03 -0.13 -0.35 -1.28 -1.63 0.12 0.08 0.11 -0.25 0.24 0.06 -0.15 -0.03 -0.21 0.21 -0.23 0.02 -0.01 -0.12 0.07 0.05 -0.87 -0.07 -0.19 0.04 -0.09 -0.03 -0.13 0.11 0.06 -0.15 0.23 0.01 0.34 -0.02 -0.01 0 0.03 -0.01 -0.05 6.33 0.04 -0.17 -0.06 0.1 -0.14 -0.59 -0.42 -0.08 -0.12 -0.09 -0.14 0.09 -0.1 -0.1 -0.28 0.11 -0.33 -0.08 At1g63970 260324_at ISPF similar to 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase from Catharanthus roseus 4

isopentenyl diphosphate biosynthesis -- mevalonate-independent
Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Biosynthesis of prenyl diphosphates
IPP (isopentenyl diphosphate) and DMAPP (dimethylallyl diphosphat) biosynthesis | MEP (methylerythritol P) pathway, plastids
0.78 7.97



































































































































































page created by Juergen Ehlting 04/20/06