Co-Expression Analysis of: CYP75B1, F3'H (At5g07990) Institut de Biologie Moléculaire des Plantes















































































































































































































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Stress Data Set save / view heatmap as: OpenOffice Table annotation details for co-expressed genes can be found to the right of the heatmap

















































































































































































































































MS Excel table





















































































































































































































































save / view all data as: Tab delimited table For further information on the experiments please go to the Genevestigator database using the experiment-ID given in brackets.


















































































































































































































































shown are a maximum of 50 genes with r>0.5 (If more co-expressed genes with r>0.5 exist, they can be saved as Tab delimited data only) magnitude of change [log2(treatment / control)]    0   0.3   0.6   0.9  1.2   1.5   1.8   2.1   2.4   2.7   >3











































































































































































































































greater than zero                                                         















































































































































































































































less than zero                                                         















































































































































































































































Locus r-value Name Description Agrobacterium tumefaciens, tumor at stem (8) Myzus persicae, 8h, leaf (82) Gigaspora rosea, 3d, roots (23) Heterodera schachtii, 21d, roots (24) Pseudomonas syringae hrpA, 2h, Col5 leaf (71) P. syringae DC3000 avrRpm1, 4h, Col5 leaf (71) P. syringae DC3000, 4h, Col5 leaf (71) P. syringae hrpA, 4h, Col5 leaf (71) P. syringae DC3000, 12h, Col5 leaf (71) P. syringae hrpA, 12h, Col5 leaf (71) P. syringae DC3000, 2h, Col leaf (106) P. syringae DC3000, 6h, Col leaf (106) P. syringae DC3000, 24h, Col leaf (106) P. syringae avrRpm1, 2h, Col leaf (106) P. syringae avrRpm1, 6h, Col leaf (106) P. syringae avrRpm1, 24h, Col leaf (106) P. syringae HrcC, 2h, Col leaf (106) P. syringae HrcC, 6h, Col leaf (106) P. syringae HrcC, 24h, Col leaf (106) P. syringae pv. phaseolicola, 2h, Col leaf (106) P. syringae pv. phaseolicola, 6h, Col leaf (106) P. syringae pv. phaseolicola, 24h, Col leaf (106) P. syringae, resistant, 4h, Col leaf, uninfected half (148) P. syringae, resistant, 8h, Col leaf, uninfected half (148) P. syringae, resistant, 16h, Col leaf, uninfected half (148) P. syringae, resistant, 24h, Col leaf, uninfected half (148) P. syringae, resistant, 48h, Col leaf, uninfected half (148) P. syringae, susceptible, 4h, Col leaf, uninfected half (148) P. syringae, susceptible, 8h, Col leaf, uninfected half (148) P. syringae, susceptible, 16h, Col leaf, uninfected half (148) P. syringae, susceptible, 24h, Col leaf, uninfected half (148) P. syringae, susceptible, 48h, Col leaf, uninfected half (148) Erysiphe cichoracearum race UCSC, Col leaf (85) E. cichoracearum, 3h, Col leaf (86) E. cichoracearum, 10h, Col leaf (86) E. orontii, 6h, Col leaf (146) E. orontii, 12h, Col leaf (146) E. orontii, 18h, Col leaf (146) E. orontii, 24h, Col leaf (146) E. orontii, 48h, Col leaf (146) E. orontii, 72h, Col leaf (146) E. orontii, 96h, Col leaf (146) E. orontii, 120h, Col leaf (146) Botrytis cinerea, 18h, Col leaf (147) B. cinerea, 48h, Col leaf (147) Peronospora parasitica, resistant, 72h (72) P. parasitica, susceptible, 72h (72) Phytophtora infestans, 6h, Col seedling (108) P. infestans, 12h, Col seedling (108) P. infestans, 24h, Col seedling (108) elicitor flg22, Ler seedling (81) elicitor, control MgCl2, 1h, Col leaf (107) elicitor, control MgCl2, 4h, Col leaf (107) elicitor, GST, 1h, Col leaf (107) elicitor, GST, 4h, Col leaf (107) elicitor, hrpZ, 1h, Col leaf (107) elicitor, hrpZ, 4h, Col leaf (107) elicitor, GST NPP1, 1h, Col leaf (107) elicitor, GST NPP1, 4h, Col leaf (107) elicitor, flg22, 1h, Col leaf (107) elicitor, flg22, 4h, Col leaf (107) elicitor, LPS, 1h, Col leaf (107) elicitor, LPS, 4h, Col leaf (107) wounding, 15min, leaf (127) wounding, 30 min, leaf (127) wounding, 1h, leaf (127) wounding, 3h, leaf (127) wounding, 6h, leaf (127) wounding, 12h, leaf (127) wounding, 24h, leaf (127) wounding, 15min, root (127) wounding, 30 min, root (127) wounding, 1h, root (127) wounding, 3h, root (127) wounding, 6h, root (127) wounding, 12h, root (127) wounding, 24h, root (127) ozone, 1h, seedling (25) oxidative stress (paraquat), 30min, leaf (126) oxidative stress (paraquat), 1h, leaf (126) oxidative stress (paraquat), 3h, leaf (126) oxidative stress (paraquat), 6h, leaf (126) oxidative stress (paraquat), 12h, leaf (126) oxidative stress (paraquat), 24h, leaf (126) oxidative stress (paraquat), 30min, root (126) oxidative stress (paraquat), 1h, root (126) oxidative stress (paraquat), 3h, root (126) oxidative stress (paraquat), 6h, root (126) oxidative stress (paraquat), 12h, root (126) oxidative stress (paraquat), 24h, root (126) genotoxic stress (bleomycin), 30min, leaf (126) genotoxic stress (bleomycin), 1h, leaf (126) genotoxic stress (bleomycin), 3h, leaf (126) genotoxic stress (bleomycin), 6h, leaf (126) genotoxic stress (bleomycin), 12h, leaf (126) genotoxic stress (bleomycin), 24h, leaf (126) genotoxic stress (bleomycin), 30min, root (126) genotoxic stress (bleomycin), 1h, root (126) genotoxic stress (bleomycin), 3h, root (126) genotoxic stress (bleomycin), 6h, root (126) genotoxic stress (bleomycin), 12h, root (126) genotoxic stress (bleomycin), 24h, root (126) osmotic stress (mannitol), 30min, leaf (126) osmotic stress (mannitol), 1h, leaf (126) osmotic stress (mannitol), 3h, leaf (126) osmotic stress (mannitol), 6h, leaf (126) osmotic stress (mannitol), 12h, leaf (126) osmotic stress (mannitol), 24h, leaf (126) osmotic stress (mannitol), 30min, root (126) osmotic stress (mannitol), 1h, root (126) osmotic stress (mannitol), 3h, root (126) osmotic stress (mannitol), 6h, root (126) osmotic stress (mannitol), 12h, root (126) osmotic stress (mannitol), 24h, root (126) salt (NaCl), 30min, leaf (126) salt (NaCl), 1h, leaf (126) salt (NaCl), 3h, leaf (126) salt (NaCl), 6h, leaf (126) salt (NaCl), 12h, leaf (126) salt (NaCl), 24h, leaf (126) salt (NaCl), 30min, root (126) salt (NaCl), 1h, root (126) sal (NaCl), 3h, root (126) salt (NaCl), 6h, root (126) salt (NaCl), 12h, root (126) salt (NaCl), 24h, root (126) drought (excised leaves, laminar air flow), 2 h, leaf (58) drought (15 min dry air, then closed vessels ), 15min, leaf (126) drought (15 min dry air, then closed vessels ), 30min, leaf (126) drought (15 min dry air, then closed vessels ), 1h, leaf (126) drought (15 min dry air, then closed vessels ), 3h, leaf (126) drought (15 min dry air, then closed vessels ), 6h, leaf (126) drought (15 min dry air, then closed vessels ), 12h, leaf (126) drought (15 min dry air, then closed vessels ), 24h, leaf (126) drought (15 min dry air, then closed vessels ), 15min, root (126) drought (15 min dry air, then closed vessels ), 30min, root (126) drought (15 min dry air, then closed vessels ), 1h, root (126) drought (15 min dry air, then closed vessels ), 3h, root (126) drought (15 min dry air, then closed vessels ), 6h, root (126) drought (15 min dry air, then closed vessels ), 12h, root (126) drought (15 min dry air, then closed vessels ), 24h, root (126) freezing, recovery, 3h, leaf (58) freezing, recovery, 24h, leaf (58) cold (4°C), seedling (76) cold (4°C), 24h, (58) cold (4°C), 30min, leaf (126) cold (4°C), 1h, leaf (126) cold (4°C), 3h, leaf (126) cold (4°C), 6h, leaf (126) cold (4°C), 12h, leaf (126) cold (4°C), 24h, leaf (126) cold (4°C), 30min, root (126) cold (4°C), 1h, root (126) cold (4°C), 3h, root (126) cold (4°C), 6h, root (126) cold (4°C), 12h, root (126) cold (4°C), 24h, root (126) heat (30°C), 1h, seedling (59) heat (40°C), 1h, seedling (59) heat (55°C), 10min, 1h recovery, suspension cell (26) heat (38°C), 15min, leaf (126) heat (38°C), 30min, leaf (126) heat (38°C), 1h, leaf (126) heat (38°C), 3h, leaf (126) heat (38°C), 3h, 1h recovery, leaf (126) heat (38°C), 3h, 3h recovery, leaf (126) heat (38°C), 3h, 9h recovery, leaf (126) heat (38°C), 3h, 21h recovery, leaf (126) heat (38°C), 15min, root (126) heat (38°C), 30min, root (126) heat (38°C), 1h, root (126) heat (38°C), 3h, root (126) heat (38°C), 3h, 1h recovery, root (126) heat (38°C), 3h, 3h recovery, root (126) heat (38°C), 3h, 9h recovery, root (126) heat (38°C), 3h, 21h recovery, root (126) heat (38°C), 15min, suspension cell (126) heat (38°C), 30min, suspension cell (126) heat (38°C), 1h, suspension cell (126) heat (38°C), 3h, suspension cell (126) heat (38°C), 3h, 1h recovery, suspension cell (126) heat (38°C), 3h, 3h recovery, suspension cell (126) heat (38°C), 3h, 9h recovery, suspension cell (126) heat (38°C), 3h, 21h recovery, suspension cell (126) UV-B, 15min, leaf (126) UV-B, 30min, leaf (126) UV-B, 1h, leaf (126) UV-B, 3h, leaf (126) UV-B, 6h, leaf (126) UV-B, 12h, leaf (126) UV-B, 24h, leaf (126) UV-B, 15min, root (126) UV-B, 30min, root (126) UV-B, 1h, root (126) UV-B, 3h, root (126) UV-B, 6h, root (126) UV-B, 12h, root (126) UV-B, 24h, root (126) high light, leaf (95) low light, leaf (95) low light, 3h, petiole (13) Cs, 7d, leaf (97) bleomycin, 3d, whole plant (57) Norfluazone, whole seedling (98) Zn, whole rosette, A. halleri (101) Zn, whole roots, A_halleri (101) Zn, whole rosette, A. petrea (101) Zn, whole roots, A. petrea (101) zearalenone (c2t), 14d, seedlings (103) zearalenone (c4t), 14d, seedlings (103) Cs, 7d, root (97) t-zeatin, seedling (115) fumomisin, protoplast (62) syringolin, 10h, leaf (86) isoxaben, suspension cell (10) Locus Probeset Name Description Annotation score GO.keywords FunCat keywords AraCyc annotations KEGG annotations BioPath annotations AcylLipid category Literature annotations Gene family 90% quantile of DE max. DE




















At5g07990 1.000 TT7, CYP75B1 flavonoid 3'-monooxygenase / flavonoid 3'-hydroxylase (F3'H) / cytochrome P450 75B1 (CYP75B1) / transparent testa 7 protein (TT7) -0.44 0.01 0.01 1.6 0.01 0.01 0.01 0.01 -0.38 -0.28 -0.14 0.15 -0.46 -0.22 -0.08 -0.56 0.04 0.05 -0.62 -0.12 0.23 -0.56 -0.34 0.32 0.1 0.32 0.06 -0.34 0.16 -0.34 -0.12 -0.12 -0.31 0.11 0.25 -0.34 -0.04 -0.72 0.13 -0.2 -0.4 -1.51 -1.01 -0.01 0.26 0.78 -0.45 -0.08 0.09 -0.37 -0.03 -0.42 0.33 -0.12 0.11 -0.24 0.52 0.04 0.4 -0.33 0.6 -0.09 0.08 -0.1 0.06 0.39 0.31 -0.07 0.61 0.13 0.09 0.09 -0.62 -0.05 -0.22 0.18 -0.64 -0.19 0.26 -0.28 -0.38 -0.57 0.06 0.94 -0.01 -0.45 -0.01 -0.49 -0.22 -0.73 -0.2 0.03 0.34 -0.23 0.9 0.66 -0.41 -0.88 -0.12 -0.14 -0.33 -1.03 0.43 0.1 0.31 -0.01 0.81 0.04 0.49 -0.03 -0.14 -0.43 -0.56 -0.43 -0.1 0.07 0.4 -0.01 1.25 1.03 0.34 -0.38 0.07 -1.02 -0.63 -0.27 -0.28 0.34 0.32 0.19 0.82 0 0.54 -0.07 0.31 0.01 -0.45 -0.19 -1.05 0.6 -0.51 -0.65 -0.78 -0.38 1.25 0.27 0.09 0.3 0.36 0.8 -0.66 0.47 0.22 0.33 -0.27 -1.32 0.33 -0.03 -0.36 0.01 0.11 0.01 0.14 0.66 0.14 -0.11 0.62 0.36 0.63 0.21 -0.18 0.12 0.27 -0.54 1 -0.04 0.01 0.01 0.01 0.48 0.06 0.01 0.01 0.01 0.35 0.28 0.91 1.75 -0.02 0.09 -0.27 0.2 0.78 0.48 0.14 -0.76 -0.24 0.07 1.46 0.01 -0.49 0.28 0.53 0.39 -0.71 0.01 0.01 -0.3 0.59 -0.03 -0.15 -0.52 0.01 -2.31 -0.05 At5g07990 250558_at TT7, CYP75B1 flavonoid 3'-monooxygenase / flavonoid 3'-hydroxylase (F3'H) / cytochrome P450 75B1 (CYP75B1) / transparent testa 7 protein (TT7) 10 flavonoid 3'-monooxygenase activity | response to UV | flavonoid biosynthesis secondary metabolism anthocyanin biosynthesis | flavonol biosynthesis Flavonoid biosynthesis

flavonoid, anthocyanin, and proanthocyanidin biosynthesis cytochrome P450 family, 3’-hydroxylase for narigenin, dihydrokaempferol, flavonoid biosynthesis 1.54 4.06




















At3g51240 0.524 F3H Encodes flavanone 3-hydroxylase that is coordinately expressed with chalcone synthase and chalcone isomerases. Regulates flavonoid biosynthesis. -1.71 0.02 0.02 0.84 -0.28 -0.17 0.13 -0.17 -1.41 -0.88 0.45 0.24 -0.16 -0.28 0.02 -0.71 -0.09 0.02 -0.48 0.56 0.02 -0.9 0.19 -0.26 -0.59 -0.38 -0.37 0.41 0.18 -0.59 -0.73 -0.22 0.2 0.02 -1.7 -0.23 -0.51 -1.6 -0.28 -0.19 -1.67 -2.43 -1.73 -0.17 -0.56 -0.41 -0.8 -0.36 -0.27 -1.55 -0.32 0.27 0.08 -0.34 0.16 -0.34 0.36 -0.35 0.46 -0.57 0.04 -0.48 -0.11 0.07 -0.14 -0.71 -0.17 0.12 0.23 -0.62 0.3 -0.56 -0.97 0.05 -0.46 -0.1 -0.89 -0.55 0.28 0.09 0.26 0.25 -0.43 -0.11 -0.54 -1.01 0.36 -0.52 -0.47 -0.37 -0.18 -0.01 0.28 0.39 -0.08 0.06 -0.65 -1.26 0.91 -0.15 -0.07 -1.17 -0.23 0.3 1.17 1.35 1.32 1.38 0.1 0.03 1.05 0.52 -0.15 0.46 0.06 -0.01 1.94 2.31 1.14 1.29 -0.03 -0.24 -0.5 -1.63 -0.4 -0.47 -0.83 0.48 0.45 0.51 1.26 0.01 0.05 -0.43 0.67 0.28 -0.37 0.57 -0.36 0.35 -0.3 -0.76 -3.98 2.13 3.07 0.63 0.8 2.04 2.99 1.11 0.19 0.39 0.18 1 0.03 -0.22 1.14 -2.11 -1.75 0.78 0.74 0.04 -1.12 -1.49 0.05 -0.02 1.07 0.32 0.51 -0.53 -0.74 -1.75 -0.4 -0.32 0.97 0.23 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.39 0.7 1.85 3.48 0.6 -0.11 0.08 0.56 0.9 2.44 3.01 0.9 0.26 0.1 0.66 -0.76 0.1 0.42 -1.01 0.94 -2.39 0.63 -1.72 0.52 0.97 0.22 0.98 0.41 -1.19 -1.36 0.02 At3g51240 252123_at F3H Encodes flavanone 3-hydroxylase that is coordinately expressed with chalcone synthase and chalcone isomerases. Regulates flavonoid biosynthesis. 10 flavonoid biosynthesis | naringenin 3-dioxygenase activity secondary metabolism flavonoid biosynthesis Flavonoid biosynthesis Phenylpropanoid Metabolism | Flavonoid and anthocyanin metabolism
flavonoid, anthocyanin, and proanthocyanidin biosynthesis
3.00 7.46




















At1g03940 0.513
transferase family protein, similar to anthocyanin 5-aromatic acyltransferase from Gentiana triflora, malonyl CoA:anthocyanin 5-O-glucoside-6'''-O-malonyltransferase from Perilla frutescens -3.84 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 1.39 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 1.81 1.09 -0.06 -0.06 -0.06 -0.06 2.25 -0.06 -0.06 2.59 -0.06 -0.06 -0.96 -1.71 -0.06 -2.83 -0.06 -0.06 -2.35 -3.96 -3.84 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.27 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -1.51 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 1.48 -0.06 -0.06 -0.06 -0.06 1.34 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 2.2 0.37 -0.06 -0.06 -0.06 -0.06 0.79 -0.06 -0.06 -0.06 1.2 -0.06 3.03 1.86 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 2.68 2.25 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 3 -0.06 2.1 -1.51 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 4.17 -0.06 -0.06 -0.06 -0.06 -0.06 -1.51 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -1.51 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 1.63 -0.06 -0.06 -0.06 -0.06 -1.51 3.56 -0.06 -0.06 2.52 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -0.06 -4.73 -0.06 At1g03940 265091_s_at
transferase family protein, similar to anthocyanin 5-aromatic acyltransferase from Gentiana triflora, malonyl CoA:anthocyanin 5-O-glucoside-6'''-O-malonyltransferase from Perilla frutescens 1



Phenylpropanoid Metabolism | Flavonoid and anthocyanin metabolism

acyltransferase, BAHD family, group B, AT-like 3.44 8.90




















At5g54060 0.506
glycosyltransferase family protein -2 0.15 0 0.56 0 0 0 0 -0.83 0.07 0 0 0 0 0 0 0 0 0 0 0 0 -0.08 -0.4 -0.9 -0.26 -0.25 -1.58 0.59 -0.9 -0.26 1.42 0 0 -0.55 -1.27 -0.6 -1.94 0 -0.3 -2.24 -3.37 -3.06 0 -0.16 0 0 0 0 -0.34 -0.32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.12 0 0 -0.48 -0.96 0 0 0.15 0.89 0.83 -0.56 0.46 1.06 1.04 -0.26 0 0 -0.48 0.73 0 0.14 0.07 0 0.03 0 0 -0.26 0 0 1.17 0.42 0 0.12 0.2 0.57 0.78 0 0 0.54 0.1 0.08 1.14 0.93 0 0 0 0.77 -0.03 0.51 0 -0.26 0.7 1.56 2.31 2.54 0.32 0.3 0.03 0.63 0.49 0 -1.32 0 0.56 0.4 2.54 0.75 1.36 0.34 0 0 0 0.2 0 -0.56 0 -0.68 -2.04 0.59 1.98 0.36 0.34 0 0 -0.48 -0.96 0.26 0 0.45 0.71 -0.43 0.55 0 0 0 0 0 -0.26 0 -0.49 0 -0.48 -0.68 0 0 0 0 -0.59 0 -0.56 0 0 0 0 0 0 0 0 0 0 0.09 0 0.3 0 0.09 0 0.31 0.75 0.76 0 0 -0.48 -0.96 2.29 -0.56 0 1.35 0 1.01 -1.4 -1.06 -0.78 0.15 0 0 0 -0.2 0 -3.41 0 At5g54060 248185_at
glycosyltransferase family protein 1

flavonol biosynthesis
Phenylpropanoid Metabolism | Flavonoid and anthocyanin metabolism

Glycosyl transferase, Family 1 2.21 5.96



















































































































































































































































































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