Co-Expression Analysis of: CYP76C2 (At2g45570) Institut de Biologie Moléculaire des Plantes


































































































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Hormones etc. Data Set save / view heatmap as: OpenOffice Table annotation details for co-expressed genes can be found to the right of the heatmap


















































































































MS Excel Table


















































































































save / view all data as: Tab delimited Table



















































































































shown are a maximum of 50 genes with r>0.5 (If more co-expressed genes with r>0.5 exist, they can be saved as Tab delimited data only) magnitude of change [log2(treatment/control)]    0   0.3   0.6   0.9  1.2   1.5   1.8   2.1   2.4   2.7   >2.99 












































































































greater than zero                                                         












































































































less than zero                                                         












































































































Locus r-value Name Description ethylene, 3h, petiole (13) mock, 30min, seedling (110) IAA, 30min, seedling (110) IAA, 1h, seedling (110) IAA, 3h, seedling (110) zeatin, 30min, seedling (110) zeatin, 1h, seedling (110) zeatin, 3h, seedling (110) GA3, 30min, seedling (110) GA3, 1h, seedling (110) GA3, 3h, seedling (110) ABA, 30min, seedling (110) ABA, 1h, seedling (110) ABA, 3h, seedling (110) MJ, 30min, seedling (110) MJ, 1h, seedling (110) MJ, 3h, seedling (110) ACC, 30min, seedling (110) ACC, 1h, seedling (110) ACC, 3h, seedling (110) BL, 30min, seedling (110) BL, 1h, seedling (110) BL, 3h, seedling (110) ABA, 3 uM, imbided seed (116) ABA, 30 uM, imbided seed (116) GA, 3h, imbibed seed (119) GA, 6h, imbibed seed (119) GA, 9h, imbibed seed (119) GA, 3h, imbibed seed (134) GA, 6h, imbibed seed (134) GA, 9h, imbibed seed (134) GA, 30min, whole plant (99) GA, 60min, whole plant (99) GA, 3h, whole plant (99) IAA, 0.1uM, 1h, seedling (144) IAA, 0.1uM, 3h, seedling (144) IAA, 1uM, 1h, seedling (144) IAA, 1uM, 3h, seedling (144) ppi, 3h, seedling (113) ppi, 12h, seedling (113) uni, 3h, seedling (113) uni, 12h, seedling (113) brz220, 3h, seedling (113) brz220, 12h, seedling (113) brz91, 3h, seedling (113) brz91, 12h, seedling (113) pac, 3h, seedling (113) pac, 12h, seedling (113) px, 3h, seedling (113) px, 12h, seedling (113) pno8, 3h, seedling (113) pno8, 12h, seedling (113) ibup, 3h, seedling (113) B9, 3h, seedling (113) AgNO3, 3h, seedling (113) AVG, 3h, seedling (113) Sal, 3h, seedling (113) MG132, 3h, seedling (113) 246T, 3h, seedling (113) PCIB, 3h, seedling (113) TIBA, 3h, seedling (113) NPA, 3h, seedling (113) CHX, 3h, seedling (113) Colm, 3h, seedling (113) ColPNO8, 3h, seedling (113) ColBrz, 3h, seedling (113) glucose, 8h, seedling (14) sucrose, 8h, seedling (15) deoxyglucose, 8h_seedling (14) methylglucose, 8h, seedling (14) K depleted, whole rosette (97) K depleted, root (97) Sulfate depleted, 2h, root (112) Sulfate depleted, 4h, root (112) Sulfate depleted, 8h, root (112) Sulfate depleted, 12h, root (112) Sulfate depleted, 24h, root (112) mannitol, 8h, seedling (14) CO2, 1000ppm, guard cell enriched (11) CO2, 1000ppm, mature leaf (11) CO2, high light, whole rosette (95) CO2, medium light, whole rosette (95) CO2, low light, whole rosette (95) CO2, 2h, juvenile leaf (151) CO2, 4h, juvenile leaf (151) CO2, 6h, juvenile leaf (151) CO2, 12h, juvenile leaf (151) CO2, 24h, juvenile leaf (151) CO2, 48h, juvenile leaf (151) dark, 45min, seedling (109) dark, 4h, seedling (109) far red, 45min, seedling (109) far red, 4h, seedling (109) red pulse1, seedling (109) red pulse2, seedling (109) red, 45min, seedling (109) red, 4h, seedling (109) blue, 45min, seedling (109) blue, 4h, seedling (109) UV-A pulse1, seedling (109) UV-A pulse2, seedling (109) UV-AB pulse1, seedling (109) UV-AB pulse2, seedling (109) UV-A, 18h, mature leaf (72) UV-B, 18h, mature leaf (72) Locus Probeset Name Description Annotation score GO.keywords FunCat keywords AraCyc annotations KEGG annotations BioPath annotations AcylLipid category Literature annotations Gene family 90% quantile of DE max. DE
At2g45570 1.000 CYP76C2 cytochrome P450 family protein -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 3.5 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 2.8 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 3.6 At2g45570 267559_at CYP76C2 cytochrome P450 family protein 1






cytochrome P450 family 0.00 3.76
At1g09500 0.771
similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function, NOT a cinnamyl-alcohol dehydrogenase -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 2.2 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 1.1 -0.8 0 -0.1 -0.8 0 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 3.4 -0.1 0.3 -0.1 0.9 0.9 3.6 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 1.6 -0.1 -1.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 4.5 At1g09500 264514_at
similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function, NOT a cinnamyl-alcohol dehydrogenase 2

lignin biosynthesis


Phenylpropanoid pathway
1.27 5.68
At2g13810 0.724
aminotransferase class I and II family protein, low similarity to Aromatic Aminotransferase from Pyrococcus horikoshii 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.9 0.6 0 0 0 0 0 0 -1 0 0 0 0 0 0 0.5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.5 At2g13810 265658_at
aminotransferase class I and II family protein, low similarity to Aromatic Aminotransferase from Pyrococcus horikoshii 2


Carbon fixation | Glutamate metabolism | Alanine and aspartate metabolism | Cysteine metabolism | Arginine and proline metabolism | Tyrosine metabolism | Phenylalanine, tyrosine and tryptophan biosynthesis | Alkaloid biosynthesis I | Novobiocin biosynthesis | Phenylalanine metabolism



0.00 3.64
At3g22600 0.676
protease inhibitor/seed storage/lipid transfer protein (LTP) family protein -2 -0.1 0 0.2 0.2 -0.2 0 0.2 -0.1 -0.2 -0.3 0 0.5 1.4 -0.3 -0.1 -0.6 -0.1 -0.1 -0.1 -0.2 -0.2 -0.1 -0.1 -0.1 -0.1 -0.1 0.2 -0.1 -0.1 0.2 -0.4 -0.3 -0.7 0 0.2 0.4 0.1 -0.2 0.1 -0.3 0 0 -0.1 -0.2 -0.1 -0.2 0 0.2 0.3 0 0 0.3 -0.1 0.9 0.1 0.9 -0.2 0.7 0.3 1.1 -0.5 -0.4 -0.3 -0.5 -0.1 -0.7 0.6 -0.8 -0.9 3 -0.1 0 0.3 0.3 -0.1 0.1 -0.7 -1.2 -1.4 -0.1 -0.1 -0.1 -0.1 -0.1 -0.3 -0.1 -0.1 -0.1 0 -0.4 -0.1 0 0 -0.2 0 0 0.1 0 0 -0.1 0.1 0.3 1.6 3.4 At3g22600 256933_at
protease inhibitor/seed storage/lipid transfer protein (LTP) family protein 2




Miscellaneous acyl lipid metabolism

1.76 5.47
At4g34230 0.658 CAD5 Encodes a catalytically active cinnamyl alcohol dehydrogenase which uses p-coumaryl aldehyde as a preferred substrate. It can also use sinapyl, caffeyl, coniferyl and d-hydroxyconiferyl aldehydes as substrates. -0.3 0 -0.2 0 0.1 0 0.1 -0.2 0 0.1 0.1 0.2 0.9 2.1 -0.1 0.3 0.4 0 0 0.1 0.1 0.1 -0.4 0 0 0 0 -0.3 0 0 -0.3 0 0 -0.2 -0.1 -0.1 -0.1 -0.3 -0.2 0 -0.2 0 -0.1 0 -0.2 0 -0.1 0.1 0 0.1 -0.1 0 -0.2 -0.1 0.9 -0.2 0 -0.2 0.1 0.1 -0.2 -0.2 -1.9 0 0.1 0 0.1 0.3 0.4 0 1.7 0.5 0 0.1 0 -0.1 0 0 -0.4 -0.9 0 0.1 -0.5 0 0 -0.1 -0.1 -0.1 0 -0.1 0 -0.2 0 -0.1 -0.1 0 0 0 0 0 -0.1 -0.1 -0.1 0.4 1 At4g34230 253277_at CAD5 Encodes a catalytically active cinnamyl alcohol dehydrogenase which uses p-coumaryl aldehyde as a preferred substrate. It can also use sinapyl, caffeyl, coniferyl and d-hydroxyconiferyl aldehydes as substrates. 10 cinnamyl-alcohol dehydrogenase activity | lignin biosynthesis biogenesis of cell wall lignin biosynthesis Stilbene, coumarine and lignin biosynthesis Phenylpropanoid Metabolism | core phenylpropanoid metabolism
Phenylpropanoid pathway
0.92 4.11
At3g49210 0.645
expressed protein 0 0 0 0.1 0.2 0 -0.2 0 0.1 0.1 0.1 0 -0.2 0.9 -0.5 -0.4 -0.6 0.1 0 0.2 0 0.2 0.1 0 0 0 0 0 0 0 0 0.4 0.6 0.1 -0.2 -0.1 0.1 -0.2 -0.4 0 -0.2 0 -0.4 -0.1 -0.2 0.1 -0.1 0.1 0 0.2 -0.3 0.5 -0.5 -0.2 0.4 -0.2 0.4 -0.3 -0.6 0 -0.4 -0.1 0.2 -0.1 0.3 0.1 0 0.2 0 0.2 1.9 0 0 0.1 -0.1 0 -0.1 0 0 -1.7 0 0 0 0 0 0 0 0 0 0 0.1 0 0.2 0 -0.1 0 -0.1 0 0 0 -0.1 0.1 0 0 1.5 At3g49210 252303_at
expressed protein 2




Fatty acid elongation and wax and cutin metabolism

0.98 3.76
At5g20830 0.642 SUS1 sucrose synthase / sucrose-UDP glucosyltransferase -0.2 0 0 -0.1 0.2 0 0 0 0.1 0 0 0.1 0.4 3.4 -0.1 -0.1 -0.2 0.1 0 0.2 0.1 0.1 0 0.4 0.2 -0.4 0 -0.2 -0.4 0 -0.2 -0.1 0.4 0.1 0.5 0.5 -0.2 -0.4 0 0 -0.3 0 0.1 -0.5 0.1 0.3 0.2 -0.3 -0.6 0.1 0 -0.3 0.1 -0.1 0.3 -0.5 0 -0.6 -0.1 -0.1 -0.1 0 -0.5 -0.7 0.4 -0.7 -0.5 1.8 0.2 0 0.7 0 0 0.2 0.2 0.3 0 0 -0.5 0 0.2 0.4 -0.4 0 0.1 0 0 0.3 -0.1 -0.2 -0.9 0 -0.2 -0.2 -0.9 -0.2 -0.9 -0.2 0 -0.2 0 -0.2 0.2 -0.2 1.5 At5g20830 245998_at SUS1 sucrose synthase / sucrose-UDP glucosyltransferase 10 response to cold | response to flooding C-compound, carbohydrate anabolism | glycolysis and gluconeogenesis sucrose biosynthesis | sucrose degradation III Starch and sucrose metabolism Cell Wall Carbohydrate Metabolism | sucrose metabolism


1.21 4.37
At3g01420 0.641 ALPHA-DOX1 Encodes an alpha-dioxygenase involved in protection against oxidative stress and cell death. -0.1 -0.1 -0.2 0.5 0.2 0 0.5 0 0 0.3 -0.4 -0.4 0.5 2.7 -0.5 0.3 0 -0.1 0 -0.2 -0.7 0.4 -0.3 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.1 -0.6 0.3 0.1 0.3 -0.3 -0.5 0.6 -0.4 0.3 -0.4 0.4 -0.2 0.3 0 0.5 -0.1 0.3 -0.4 0.2 0 -0.3 -0.9 0 1.3 -0.9 0.5 0.4 0 -0.3 -1 -1 -2 -0.7 -0.7 1.8 0 -0.2 1.6 0.3 -0.1 0.2 0 0.1 0.1 -0.1 -1.2 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.2 0.1 0 0 0 -0.1 -0.2 0 0 0.3 0.2 0.2 -0.1 0.2 -0.1 2.5 At3g01420 258957_at ALPHA-DOX1 Encodes an alpha-dioxygenase involved in protection against oxidative stress and cell death. 10 lipoxygenase activity | fatty acid alpha-oxidation | cell death
jasmonic acid biosynthesis | lipoxygenase pathway

Lipid signaling

1.57 4.78
At2g29090 0.637 CYP707A2 cytochrome P450 family protein, similar to taxane 13-alpha-hydroxylase (Taxus cuspidata). 0.7 -0.2 -0.3 -0.4 0.4 -0.5 -0.6 -0.8 -0.3 0 -0.8 0 1.6 3 -1 -0.6 -0.8 -1 0.1 -0.1 -0.2 -0.6 -0.8 0.8 0.9 0.8 0.2 0.3 0.8 0.2 0.3 -0.1 -0.6 -0.6 0.3 -0.1 -0.2 0 0.6 -0.3 -0.1 0 0.6 -0.2 0.1 -0.3 -0.2 -0.1 -0.2 0.2 0.6 -0.3 0.5 -0.2 -0.2 -0.2 -0.2 0.6 0.2 -0.2 -0.2 0.3 0.8 -0.2 -0.2 -0.2 0.7 -0.4 0.8 0.3 2.6 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 0.2 -1.4 -0.7 0 -1.1 -0.2 -0.4 -0.5 0.3 -0.2 0 0.1 -0.2 -0.2 -0.2 1.2 -0.2 -0.2 -0.2 -0.2 -0.2 0.1 0.3 -0.2 -0.2 -0.2 -0.2 1.8 At2g29090 266778_at CYP707A2 cytochrome P450 family protein, similar to taxane 13-alpha-hydroxylase (Taxus cuspidata). 10





degradation of abscisic acid cytochrome P450 family, 8’-hydroxylase for ABA, degradation of abscisic acid 1.76 4.47
At5g66760 0.637 SDH1-1 One of two genes in Arabidopsis that encode a flavoprotein subunit of the mitochondrial succinate dehydrogenase complex. 0 0 -0.2 0 0.1 0 -0.2 0 0 0 0.1 -0.2 0 1.3 -0.2 0 0.1 -0.3 -0.2 0.1 -0.1 -0.2 0 0 0 -0.1 0 0.1 -0.1 0 0.1 -0.3 0 0 0.1 0 0 -0.3 0.2 0 0.3 -0.1 0.1 0 0 -0.2 -0.1 -0.1 -0.2 0 0 -0.1 0.2 -0.1 0 -0.1 0 0.2 0.1 0 0 0.3 -0.6 -0.1 -0.1 -0.1 0.3 0.8 0.1 0.1 0.1 -0.3 0.1 -0.1 0 0 0.1 0 -0.5 -0.4 -0.2 -0.3 0 0 0 0.1 0.1 0.2 0 0 -0.6 0 0.3 0 -0.5 -0.1 -0.5 0.1 0.1 0.1 -0.6 0 0.5 0.1 2 At5g66760 247060_at SDH1-1 One of two genes in Arabidopsis that encode a flavoprotein subunit of the mitochondrial succinate dehydrogenase complex. 4 succinate dehydrogenase activity | mitochondrial electron transport, succinate to ubiquinone C-compound and carbohydrate metabolism | tricarboxylic-acid pathway (citrate cycle, Krebs cycle, TCA cycle) aerobic respiration -- electron donors reaction list | TCA cycle -- aerobic respiration Citrate cycle (TCA cycle) | Oxidative phosphorylation Intermediary Carbon Metabolism | Gluconeogenesis from lipids in seeds


0.80 2.66
At5g10730 0.636
expressed protein 0 0 -0.1 -0.1 0 0 0 -0.1 0 0 0 0.2 0.1 1.6 0 0 0.2 0.2 0.1 0 0.1 0.2 -0.1 0.3 0.6 0.1 0 -0.3 0.1 0 -0.3 -0.1 -0.2 0 0 0.1 0 -0.2 0 -0.1 0 -0.1 0.1 -0.1 0 -0.1 0 -0.1 0.1 0 0 0 0.1 -0.1 0 0 0 0 0 0 0.1 0 -0.2 -0.3 0 0 -0.1 0.1 -0.3 0 0.4 0 0 0 0 0.3 0.1 -0.4 -0.5 0 -0.2 0.1 -0.2 0 0 -0.1 0 0 0.1 -0.2 -0.1 -0.1 0.2 -0.2 -0.3 -0.2 -0.1 0 0.1 0 -0.3 -0.1 0.5 -0.2 0.7 At5g10730 246017_at
expressed protein 1

colanic acid building blocks biosynthesis | dTDP-rhamnose biosynthesis | galactose degradation I | UDP-glucose conversion | lactose degradation IV




0.65 2.20
At1g74020 0.635 SS2 strictosidine synthase family protein / AtSS-2 strictosidine synthase (SS) 0 0 -0.2 0 -0.2 -0.1 0.2 0 -0.2 -0.1 -0.3 -0.3 0 1.5 -0.5 0 0.3 -0.4 -0.3 -0.3 -0.3 -0.5 -0.8 -0.1 -0.1 -0.2 0.4 1.4 -0.2 0.4 1.4 0 -0.1 -0.3 0 0.2 0 -0.1 0.1 0.3 0 0.4 0 0.1 0 0 0.1 0.2 0 0.1 -0.3 0 0.1 0 0.5 0.1 0.3 -0.4 0 0 0 -0.1 -1.1 -0.5 -0.8 -0.4 -0.1 -0.1 -0.1 -0.1 2.3 0.4 0 0 -0.1 -0.1 0 0 -0.3 -0.1 -0.6 -0.3 0 0 -0.1 0 0 -0.2 0 0 0 -0.2 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0.1 0 1.4 At1g74020 260391_at SS2 strictosidine synthase family protein / AtSS-2 strictosidine synthase (SS) 2


Terpenoid biosynthesis | Indole and ipecac alkaloid biosynthesis



1.05 3.47
At1g80160 0.630
lactoylglutathione lyase family protein / glyoxalase I family protein 0 0 0 0 0 0 0 -0.1 0 0 0 -0.1 0 3.7 0 0 0.3 0 0.3 -0.1 0 0 0 0.6 0.5 -0.3 -0.5 -1 -0.3 -0.5 -1 0 0.4 0 -0.4 -0.2 -0.3 -0.3 0 -0.2 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0.6 -0.1 -2.1 -1.8 1.4 1.7 2.2 0.3 0 -0.1 0 0 0 2.2 -2.4 -1.4 0 0 0 0 0.3 0 0 0 0 0.2 1 0 -0.2 0 0.5 0 0.1 -0.2 -0.3 -0.1 0 -0.5 -0.9 0 2.2 At1g80160 262047_at
lactoylglutathione lyase family protein / glyoxalase I family protein 2

threonine degradation | methylglyoxal degradation




2.41 6.14
At4g03320 0.625
similar to P. sativum Tic20 chloroplast protein import component -0.1 -0.1 0.1 0.4 0.2 -0.1 -0.8 -0.1 -0.1 0.4 -0.4 -0.1 -0.8 1.5 -0.1 -0.8 -1.3 -0.1 -0.8 -0.4 -0.1 -0.8 -0.8 0 0 0.1 0 -0.1 0.1 0 -0.1 -2.1 -0.8 -2.1 -0.1 0.3 -0.2 0 0 0.9 0 0.3 0 0.4 -0.2 0 0.1 0.5 -0.4 0.6 0.2 0.8 -0.1 0 1.3 -0.3 0.7 1 0.4 -1.8 1.2 -0.5 -1.8 -0.5 0.2 -0.1 0.2 0 0.9 0.7 3.3 0.3 0 -0.1 0 0.2 0 1.2 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.2 0 -0.5 -0.1 -0.2 -0.2 -0.3 0 -0.4 0 -0.1 -0.1 0.1 1.1 -0.1 4 At4g03320 255430_at
similar to P. sativum Tic20 chloroplast protein import component 4
protein targeting, sorting and translocation | transport routes | chloroplast transport | biogenesis of chloroplast

Chloroplastic protein import via envelope membrane | Tic apparatus


2.11 6.15
At1g76470 0.616
cinnamoyl-CoA reductase family 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.3 0 0 -0.3 -0.7 -0.4 -0.7 0 0.3 0 -0.4 0 0 0 0 0 0 0 0 0 0 0 0 0.3 0 0 0 0 0 0.6 0 0 0 0 0 0 0 0 0 0 0 0 0 1.8 0 0 0.2 0 0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.2 At1g76470 259975_at
cinnamoyl-CoA reductase family 2

lignin biosynthesis
Phenylpropanoid Metabolism | core phenylpropanoid metabolism
Phenylpropanoid pathway
0.59 2.56
At5g39090 0.616
transferase family protein, similar to anthocyanin 5-aromatic acyltransferase from Gentiana triflora, malonyl CoA:anthocyanin 5-O-glucoside-6'''-O-malonyltransferase from Perilla frutescens and Salvia splendens 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.9 0 0.9 0 0.4 0 0 0 0 0 0 0 0 0 0 0 0.9 0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.8 At5g39090 249489_at
transferase family protein, similar to anthocyanin 5-aromatic acyltransferase from Gentiana triflora, malonyl CoA:anthocyanin 5-O-glucoside-6'''-O-malonyltransferase from Perilla frutescens and Salvia splendens 1
protein modification

Phenylpropanoid Metabolism | Flavonoid and anthocyanin metabolism

acyltransferase, BAHD family, group B, AT-like 0.14 2.29
At3g23920 0.612
beta-amylase, putative / 1,4-alpha-D-glucan maltohydrolase, putative -0.3 0 0 0 -0.2 0 -0.1 -0.4 0 0 -0.4 0.4 1.3 3.2 -0.4 0 -0.1 -0.3 -0.2 -0.4 -0.4 -0.5 -0.7 0 0.3 0.2 0.3 0.3 0.2 0.3 0.3 -0.1 0.2 -0.2 0 0 -0.2 -0.3 0 0.1 0 0.5 0 0.2 0.2 0.4 0 0.4 0.1 0.2 0.1 0.2 0.1 0 0.3 -0.1 0 0 0 -0.4 0.3 -0.1 -0.9 0.2 0 0.4 -0.4 0.1 0.3 0.2 1.4 0.2 0 0.1 -0.1 0 0.1 0 -1.5 -1.3 -0.4 0 -0.4 0 -0.1 -0.2 -0.1 0 0 -0.7 -0.4 -0.2 0.3 -0.2 -0.4 -0.3 0 0 0.1 0.3 -0.4 0.1 0 0 0.8 At3g23920 256861_at
beta-amylase, putative / 1,4-alpha-D-glucan maltohydrolase, putative 4
C-compound and carbohydrate metabolism | metabolism of energy reserves (e.g. glycogen, trehalose) starch degradation
Cell Wall Carbohydrate Metabolism | starch metabolism


0.94 4.76
At2g04350 0.602
long-chain-fatty-acid--CoA ligase family protein / long-chain acyl-CoA synthetase family protein (LACS8) -0.1 0 0 -0.1 0 -0.6 0.1 -0.2 -0.2 0.1 -0.3 0.1 1.2 3.2 -0.3 0.2 0.1 -0.2 -0.1 0 -0.1 0.1 -0.5 0.4 0.9 -0.4 0.1 0 -0.4 0.1 0 -0.2 -0.1 -0.3 0 0.1 0.1 0 0.1 0 0.1 0 0.1 -0.1 0 0 0 0 0.4 0.1 0.1 0 0.2 0 -0.1 0 0.1 0.1 0.1 0 0.2 0.3 0 -0.1 -0.3 0.1 -0.5 0.2 -0.3 -0.3 0.2 0 0.1 0.1 0.2 0.4 0 -0.3 -1.5 -1.4 -0.2 0.1 -0.5 0 0 0 -0.3 0 0 -0.3 -0.7 -0.1 0.2 -0.1 -0.6 0 -0.3 0 0 0.2 -0.4 -0.1 0.3 0.5 1.5 At2g04350 263811_at
long-chain-fatty-acid--CoA ligase family protein / long-chain acyl-CoA synthetase family protein (LACS8) 10

fatty acid oxidation pathway | octane oxidation Fatty acid metabolism Gluconeogenesis from lipids in seeds Miscellaneous acyl lipid metabolism
Acyl activating enzymes , CoA ligases, clade I, long-chain acyl-CoA synthetases 1.05 4.79
At2g34850 0.602
NAD-dependent epimerase/dehydratase family protein, similar to UDP-galactose 4-epimerase from Cyamopsis tetragonoloba and Lactococcus lactis 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 At2g34850 267429_at
NAD-dependent epimerase/dehydratase family protein, similar to UDP-galactose 4-epimerase from Cyamopsis tetragonoloba and Lactococcus lactis 2

colanic acid building blocks biosynthesis | dTDP-rhamnose biosynthesis | galactose degradation I | UDP-glucose conversion | lactose degradation IV Galactose metabolism | Nucleotide sugars metabolism



0.00 2.06
At3g46660 0.602
UDP-glucoronosyl/UDP-glucosyl transferase family protein -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 2.3 -0.1 -0.1 1.6 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.2 -0.4 -0.4 -1.4 -0.4 -0.4 -1.4 -0.1 -0.1 -0.1 -0.1 1.4 -0.1 -0.5 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 4.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 1.9 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 2.8 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 3.4 At3g46660 252487_at
UDP-glucoronosyl/UDP-glucosyl transferase family protein 1
C-compound and carbohydrate metabolism




Glycosyl transferase, Family 1 2.04 5.57
At5g04380 0.602
S-adenosyl-L-methionine:carboxyl methyltransferase family protein, similar to SAM:salicylic acid carboxyl methyltransferase (SAMT) (Clarkia breweri) and to SAM:benzoic acid carboxyl methyltransferase (Antirrhinum majus) 0 0 0 0 0 0 0 0 0 0 0 0 0 2.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 At5g04380 245703_at
S-adenosyl-L-methionine:carboxyl methyltransferase family protein, similar to SAM:salicylic acid carboxyl methyltransferase (SAMT) (Clarkia breweri) and to SAM:benzoic acid carboxyl methyltransferase (Antirrhinum majus) 2
secondary metabolism




Methyltransferase, SABATH family 0.00 2.58
At3g09640 0.598 APX2 L-ascorbate peroxidase 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 At3g09640 258695_at APX2 L-ascorbate peroxidase 8 L-ascorbate peroxidase activity
ascorbate glutathione cycle Ascorbate and aldarate metabolism Cell Wall Carbohydrate Metabolism | ascorbic acid biosynthesis


0.00 3.49
At4g09820 0.597 TT8 basic helix-loop-helix (bHLH) family protein, Affects dihydroflavonol 4-reductase gene expression. TRANSPARENT TESTA8 0 0 0 0 0 0 0 0 0 0 0 0 0 2.8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 At4g09820 255056_at TT8 basic helix-loop-helix (bHLH) family protein, Affects dihydroflavonol 4-reductase gene expression. TRANSPARENT TESTA8 8 flavonoid biosynthesis transcription | RNA synthesis | mRNA synthesis | transcriptional control

Phenylpropanoid Metabolism | Flavonoid and anthocyanin metabolism


0.00 3.25
At4g37990 0.593 ELI3-2 Encodes an aromatic alcohol:NADP+ oxidoreductase whose mRNA levels are increased in response to treatment with a variety of phytopathogenic bacteria. Though similar to mannitol dehydrogenases, this enzyme does not have mannitol dehydrogenase activity. -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.6 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.4 0.7 -0.4 -0.2 0.3 -0.2 -0.5 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 1.8 -0.1 1.7 1.6 1.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 2.2 -1.1 -0.1 -0.1 -0.1 -0.1 -0.3 -0.1 -0.3 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 4.3 At4g37990 252984_at ELI3-2 Encodes an aromatic alcohol:NADP+ oxidoreductase whose mRNA levels are increased in response to treatment with a variety of phytopathogenic bacteria. Though similar to mannitol dehydrogenases, this enzyme does not have mannitol dehydrogenase activity. 10 aryl-alcohol dehydrogenase activity | mannitol dehydrogenase activity | response to bacteria | hypersensitive response biogenesis of cell wall sorbitol fermentation | mixed acid fermentation
Phenylpropanoid Metabolism | core phenylpropanoid metabolism
Phenylpropanoid pathway
1.41 5.48
At3g19270 0.591 CYP707A4 cytochrome P450 family protein 0 0 0 0 0 0 0 0 0 0 0 0 0 1.9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 At3g19270 257035_at CYP707A4 cytochrome P450 family protein 10





degradation of abscisic acid cytochrome P450 family, 8’-hydroxylase for ABA, degradation of abscisic acid 0.00 2.38
At2g37870 0.587
protease inhibitor/seed storage/lipid transfer protein (LTP) family protein -0.3 0 0 0 0 -0.1 0 0 -0.2 0 -0.3 0 0.3 4.5 0 0 -0.3 0 0 0 0 0.1 0 0.2 -0.2 0 0 -0.2 0 0 -0.2 0 0.2 -0.8 0.1 0 0 0 0 -0.1 0 0 -0.1 -0.2 0 -0.2 -0.3 0 0.6 0.4 0 -0.3 0.1 0 0 -0.1 0.1 0 0.2 0.7 0 0 0 0 0 0 -0.6 2 -0.6 -0.6 1.7 0.4 0.3 0.1 0.2 0 0.5 -0.6 -1.2 -0.6 -1.2 0 0 0 0 0 0 0 -0.4 -0.1 -0.2 -0.2 0 -0.1 -0.2 0 0 0 0 0 0 -0.1 -0.3 0.2 0 At2g37870 266098_at
protease inhibitor/seed storage/lipid transfer protein (LTP) family protein 2




Miscellaneous acyl lipid metabolism

1.12 5.80
At3g48520 0.582 CYP94B3 cytochrome P450 family protein, similar to P450-dependent fatty acid omega-hydroxylase (Vicia sativa) -0.1 -0.1 0.3 0 0.3 0 0.1 -0.4 -0.1 -0.3 -0.5 0.8 1.4 2.7 0.2 0.4 0 -0.4 0 -0.2 -0.3 0.1 -0.2 -0.1 -0.1 0 -0.3 0 0 -0.3 0 0.7 0 -0.6 0.9 0.4 0.4 0.1 -0.5 0.6 -0.4 0.3 0 0 -0.4 0.2 0 0.3 0 0.7 -0.1 0.1 -0.3 -0.4 -0.4 -0.3 -0.2 -0.6 -0.1 -0.2 1.1 -0.6 0.3 -0.3 -0.7 -0.2 -0.1 -0.3 -0.1 -0.1 1.3 0.6 0 0.2 -0.1 -0.2 0 -0.1 -1.1 -0.6 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.6 0.2 -0.4 0.3 -0.3 -0.1 -0.4 -0.3 -0.2 0.2 0.4 0 -0.5 0.6 -0.1 1.1 At3g48520 252368_at CYP94B3 cytochrome P450 family protein, similar to P450-dependent fatty acid omega-hydroxylase (Vicia sativa) 4
lipid, fatty acid and isoprenoid metabolism | biogenesis of cell wall




cytochrome P450 family 1.57 3.88
At2g29470 0.574 ATGSTU3 Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.6 -0.1 -0.1 -0.1 -0.1 -0.1 0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.9 -0.1 -0.6 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 1.5 -0.1 -0.1 -0.1 -0.1 -0.1 2.7 -0.1 -0.1 -0.1 3.1 -0.1 -0.1 -0.1 -0.1 -0.1 2.4 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 1.7 -0.1 -2.4 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 1.8 -0.1 -0.1 -0.1 -0.1 -0.1 4.8 At2g29470 266270_at ATGSTU3 Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). 2 toxin catabolism





Glutathione S-transferase, Tau family 1.88 7.38
At1g48320 0.571
thioesterase family protein, similar to ComAB (Bacillus licheniformis) 1.6 -0.2 0 0 0.3 -0.4 -0.4 -0.1 -0.2 0 -0.1 0 0.1 1.6 -0.4 -0.5 -0.9 -0.4 0.2 0.4 -0.1 0 -0.4 -0.1 -0.6 -0.6 0.3 0.5 -0.6 0.3 0.5 0 0 -0.3 -0.2 -0.3 -0.2 -0.5 0 0 0 0.3 -0.1 0.2 0 0.1 0 0.1 0 -0.1 0.2 -0.1 0 -0.1 0.4 -0.3 0.5 0 0 0 0.4 -0.2 1.6 -0.1 0.5 -0.1 0.4 0 0.4 0.3 1.9 0.4 -0.1 -0.2 -0.3 -0.1 0 0.4 -0.6 -0.8 -0.8 0 -0.3 0 -0.1 -0.4 -0.1 -0.2 -0.1 0.1 -0.2 0 -0.1 0 -0.3 0 -0.4 0 -0.2 0.1 -0.3 0.5 -0.1 0 1.4 At1g48320 262237_at
thioesterase family protein, similar to ComAB (Bacillus licheniformis) 2



Gluconeogenesis from lipids in seeds | fatty acid beta oxidation complex


1.20 2.88
At3g62590 0.567
lipase class 3 family protein 0 0 -0.2 -0.2 0 0 0.2 0 -0.1 0 0 0 0.4 2.8 -0.1 -0.3 -0.2 0 0 -0.1 0 0.2 0 -0.3 0.3 -0.2 0.4 0.2 -0.2 0.4 0.2 -0.2 0 0.4 0.1 0.2 0 -0.3 0 -0.3 -0.6 -0.1 -0.4 -0.2 0 0 -0.2 0 -0.1 -0.5 -0.2 0 -0.2 -0.1 0 0 0 -0.2 -0.1 0.5 0.5 0 -0.1 -0.2 0.5 0 0 0 0.1 0 1.2 0 -0.3 0.4 0.1 0.1 0 0 -0.3 -0.8 -0.2 0 0 0 0 0 -0.1 0 0 -0.1 0.2 0 -0.1 0 0 0 0.1 0 -0.3 0 -0.1 -0.4 -0.1 -0.1 -0.1 At3g62590 251191_at (m)
lipase class 3 family protein 2

triacylglycerol degradation

Miscellaneous acyl lipid metabolism

0.86 3.70
At1g68620 0.558
similar to PrMC3 (Pinus radiata) -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 0.5 2.9 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.8 -0.3 -1.7 0.2 -0.3 -0.3 -0.7 0 0 -0.8 -0.3 -0.8 -0.2 -0.3 0.7 0 0.4 0.7 0.2 1.1 0.9 1.2 -0.8 2.4 -0.8 0.4 -0.8 1.4 0.6 2.8 -0.8 2.3 -0.8 1.7 -0.8 -0.7 -1.5 0.1 0 2.5 0.6 0 0.4 0.9 0.9 0 0.6 -4.1 -2.1 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.9 0 -0.4 0.3 -0.2 -0.3 -0.3 -0.3 -0.5 0.2 0.4 -0.2 1 0.6 1.8 4.6 At1g68620 262229_at
similar to PrMC3 (Pinus radiata) 2






carboxylesterase 3.14 8.76
At2g36770 0.556
UDP-glucoronosyl/UDP-glucosyl transferase family protein -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 2.7 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.4 0 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.9 -0.1 0.2 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 2.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.6 -0.1 1.5 -0.1 3.5 -0.1 -0.1 -0.1 -0.1 -0.1 0.4 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 1.4 -1.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 2.6 At2g36770 265199_s_at
UDP-glucoronosyl/UDP-glucosyl transferase family protein 1






Glycosyl transferase, Family 1 1.50 4.73
At5g53120 0.551 SPDS3 encodes a novel spermine synthase and is a paralog of previously characterized spermidine synthases, SPDS1 and SPDS2. SPDS3 forms heterodimers with SDPS2, which in turn forms heterodimers with SDPS1 in vivo. The gene does not complement speDelta3 deficien -0.2 0 0 0 -0.2 -0.1 0.3 -0.3 -0.1 0.2 -0.2 -0.1 0.9 2.7 -0.2 -0.2 -0.4 -0.5 -0.1 -0.5 -0.4 0 0 0 0 0.2 0.2 0.1 0.2 0.2 0.1 0 0 0.8 0 0 -0.1 -0.2 0.1 0 0 -0.4 0.3 0.1 0.1 -0.2 -0.1 -0.2 0.3 0.2 0 0 0.1 0.1 -0.5 0.2 0.7 -0.1 0.3 0.4 0.4 0.3 -0.9 0.3 0 0.3 -0.1 0.3 0 -0.2 0.3 -0.4 0 0 -0.2 0.1 0.1 -0.1 -0.5 -0.2 -0.3 -0.3 -1.2 0 0 -0.1 0 -0.2 0 -0.1 -1 -0.4 0.1 0 -0.8 -0.1 -0.3 0 0 0.5 -0.6 0.1 0 0.3 1 At5g53120 248250_at (m) SPDS3 encodes a novel spermine synthase and is a paralog of previously characterized spermidine synthases, SPDS1 and SPDS2. SPDS3 forms heterodimers with SDPS2, which in turn forms heterodimers with SDPS1 in vivo. The gene does not complement speDelta3 deficien 9 spermidine synthase activity | polyamine biosynthesis
spermine biosynthesis I | polyamine biosynthesis II | spermine biosynthesis II | polyamine biosynthesis III | polyamine biosynthesis I Arginine and proline metabolism | Urea cycle and metabolism of amino groups | beta-Alanine metabolism



1.15 4.05
At4g31870 0.541 ATGPX7 Encodes glutathione peroxidase. -0.6 -0.2 -0.3 0 -0.1 0 -0.2 0.3 -0.1 0 0.6 -0.5 0 0.3 0 0.2 0.8 0.1 0 0.1 0.4 0 0.3 0.2 0 -0.6 -0.2 -0.2 -0.6 -0.2 -0.2 -0.3 -0.2 0 0.1 0.5 -0.3 -0.5 0.5 -0.6 -0.4 -0.7 0 -0.6 0.7 -0.3 0 -0.6 0.4 -0.6 0.4 -0.1 0.5 0.2 0.3 0.2 0.3 0.6 0.3 1 0.7 0.2 1.3 -0.4 0.4 -0.3 -0.4 0 -0.1 -0.3 1.5 0 -0.2 0.1 0.3 -0.4 0.1 0 -0.3 -0.3 -0.9 0.3 0 -0.5 -0.1 -0.1 -0.2 -0.3 -0.3 0 -0.5 0 1 0 -0.8 -0.3 -0.7 0 -0.1 -0.1 -1 -0.3 -0.2 0.5 3.5 At4g31870 253496_at ATGPX7 Encodes glutathione peroxidase. 6
detoxification
Glutathione metabolism Biosynthesis of Amino Acids and Derivatives | Glutathione metabolism


1.52 4.68
At3g12500 0.535 ATHCHIB basic endochitinase 1.4 -0.1 -0.3 0 0.4 -0.3 -0.1 0.3 -0.3 0 0.2 -0.3 0.1 1.4 -0.6 0.6 0.3 -0.4 -0.1 0.4 -0.6 0.8 -0.3 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.2 0 -0.9 0 -0.2 -0.2 -0.1 0 0.4 0.2 0.5 0.1 0 0.1 0.4 0.1 0.1 0.4 0.5 0 0.3 0 0 0.5 -0.3 -0.4 -0.2 -0.5 0 -2.4 0 -2.7 0.3 -0.2 0.3 -0.6 1.1 -0.5 -1.2 1.6 -0.2 -0.1 0.2 0.5 0 0 -0.4 -0.1 1.2 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.3 0.5 -0.2 0 0 0.2 -0.3 0 -0.1 0.1 0 0 -0.2 -0.1 -0.1 2.7 At3g12500 256243_at ATHCHIB basic endochitinase 9 chitinase activity | defense response to fungi | jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway

Aminosugars metabolism



1.78 5.51
At2g34500 0.532 CYP710A1 cytochrome P450 family protein, similar to Cytochrome P450 61 (C-22 sterol desaturase) (Saccharomyces cerevisiae) 0 0 -0.1 0.5 -0.6 -0.1 0.2 0 -0.1 0.3 -0.5 -0.4 0.7 1.4 0 0 -0.1 -1.2 -0.1 -1.4 -0.1 0 -0.2 0 0 0 0 0 0 0 0 -0.4 -0.3 -0.8 0 -0.1 0 -0.5 -0.2 0.6 0 0.2 -0.1 0 0 0.1 0.9 0.4 0.3 0.2 -0.2 0 0 0.1 1 0.6 0.1 -1 -0.1 0.4 1.6 -0.3 0.4 -0.5 1 0 0 0 0.5 0.3 2 -0.4 0 0.4 0.1 0 0 0.3 -1.7 -2.6 0 0 0 0 0 0 0 0 0 0 -0.1 -0.1 -0.1 -0.1 -0.1 0 0 0 0 0 -0.1 -0.1 -0.3 0 2.2 At2g34500 266995_at CYP710A1 cytochrome P450 family protein, similar to Cytochrome P450 61 (C-22 sterol desaturase) (Saccharomyces cerevisiae) 1






cytochrome P450 family 1.80 4.89
At3g48690 0.530
expressed protein, similar to PrMC3 (Pinus radiata) 0 -0.1 -0.1 -0.1 0.2 -0.2 -0.1 -0.1 0 0 -0.4 0.1 0.1 1.2 0 0 0.3 -0.2 -0.1 -0.1 -0.2 -0.6 -0.8 -0.1 0 0.1 0.3 0.2 0.1 0.3 0.2 0 -0.3 -0.4 -0.2 0 -0.4 -0.2 0.3 0.3 0.3 0.2 0.2 0.2 0.6 0.2 0.4 0.1 0 0 0.6 0 0.4 0 1.1 0 0.2 0 0.3 0.1 0.6 0.1 -0.9 -0.1 0.5 0.1 -0.1 -0.1 0 0 0.5 0 0 -0.2 0 0 -0.3 0.2 -1.4 -0.9 -0.2 -0.4 -0.4 0 -0.1 -0.1 -0.1 -0.1 -0.2 -0.4 -0.2 -0.1 0.1 -0.2 -0.5 -0.2 -0.2 -0.2 0 0 -0.3 -0.1 -0.1 0.7 2.1 At3g48690 252315_at
expressed protein, similar to PrMC3 (Pinus radiata) 2






carboxylesterase 1.13 3.54
At4g34710 0.530 ADC2 arginine decarboxylase 2 is the gene responsible for induction of the polyamine biosynthetic pathway by osmotic stress. 0.1 -0.1 0 0 0.4 -0.1 0 0 -0.1 -0.1 -0.1 -0.1 0.3 1.4 0.2 0.6 1.6 -0.3 -0.3 0 -0.3 -0.5 -0.6 0 0.1 0 0.4 0.1 0 0.4 0.1 0 0.3 0.1 0.1 0.5 -0.1 -0.3 -0.1 0.1 0 0.1 0 0 -0.3 0 0 0.1 -0.4 0.1 -0.2 0 -0.1 -0.1 0.8 -0.2 0.5 -0.4 0.1 0.2 0.7 -0.2 0 -0.9 0 -0.6 -0.2 -0.3 0.5 0.5 2 0.6 0 -0.2 -0.2 -0.2 0.2 0.8 -1.1 -0.7 -1 -0.7 -0.5 -0.3 -0.3 -0.2 0 -0.4 -0.4 -0.1 0 -0.2 0.2 -0.1 0 -0.2 0 -0.2 0 0 0.1 0 0.2 -0.3 1 At4g34710 253203_at ADC2 arginine decarboxylase 2 is the gene responsible for induction of the polyamine biosynthetic pathway by osmotic stress. 7 embryonic development (sensu Magnoliophyta) | response to wounding | response to abscisic acid stimulus | response to jasmonic acid stimulus | seed development | arginine decarboxylase activity | response to osmotic stress | polyamine biosynthesis | putrescine biosynthesis biosynthesis of secondary products derived from primary amino acids | biosynthesis of amines spermine biosynthesis I | polyamine biosynthesis II | polyamine biosynthesis III | polyamine biosynthesis I | arginine degradation II | arginine degradation III | arginine degradation V | arginine degradation XII Glutamate metabolism | Arginine and proline metabolism



1.44 3.19
At5g13320 0.530
similar to auxin-responsive GH3 product (Glycine max) -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.5 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 6.2 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 4.8 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -3.8 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 4.7 At5g13320 250286_at
similar to auxin-responsive GH3 product (Glycine max) 4
plant / fungal specific systemic sensing and response | plant hormonal regulation | plant development




Acyl activating enzymes , CoA ligases, clade III, putative hormone adenylase 0.00 10.08
At4g35420 0.528
dihydroflavonol 4-reductase family / dihydrokaempferol 4-reductase family 0 0 0 0 0 0 0 0 0 0 0 0 0 1.8 0 0 0 0 0 0 0 0 0 0 0.2 0.1 0 0 0.1 0 0 0 0 0 0 0 0 -0.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.6 0 0 0 0 0 0 0 0 0 0 0 0.2 0 -0.2 0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 At4g35420 253195_at
dihydroflavonol 4-reductase family / dihydrokaempferol 4-reductase family 2
biosynthesis of secondary products derived from L-phenylalanine and L-tyrosine | biosynthesis of phenylpropanoids | biosynthesis of stilbenes, flavonoids anthocyanin biosynthesis




0.21 2.28
At4g04020 0.527
strong similarity to plastid-lipid associated proteins PAP1 (Brassica rapa), fibrillin (Brassica napus) 0 -0.1 0 0 0 -0.1 0 0 0 -0.1 -0.3 0 0.3 1.6 -0.1 0 0.1 -0.2 -0.2 -0.2 -0.1 -0.3 -0.1 0 0.3 -0.2 -0.4 -0.9 -0.2 -0.4 -0.9 -0.3 -0.4 -0.6 -0.1 0 0 -0.3 0.3 0 0.3 0.2 0.1 -0.1 0.2 0 0.1 0 0 -0.2 0.5 0 0.3 0 0.6 -0.2 0.3 0.3 0.3 0 0.6 0.2 -1.6 0.3 0.2 0.2 0.2 0.3 0.3 0.3 1 0.3 -0.3 0 0.1 0.2 -0.1 0.5 -0.3 -0.6 -0.4 0 -0.1 -0.1 -0.1 0 0 -0.1 -0.2 -0.5 -0.3 -0.2 0.2 -0.2 -0.2 -0.1 0 0 0.1 0 0 0.2 0.3 0.5 1 At4g04020 255364_s_at
strong similarity to plastid-lipid associated proteins PAP1 (Brassica rapa), fibrillin (Brassica napus) 6
transcription


Miscellaneous acyl lipid metabolism

1.10 3.29
At2g29460 0.525 ATGSTU4 Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). 0.1 -0.2 -0.2 -0.5 0.7 -0.2 -1.1 -0.2 -0.2 -1.1 -0.2 -0.2 -1.1 2.5 -0.2 0.6 2 -0.2 -1.1 0.6 -0.2 -1.1 -0.2 0 0 -0.2 -1 -0.7 -0.2 -1 -0.7 0 0.5 0.1 0.4 1 -0.7 0.3 -1.3 -0.2 -0.3 1.5 -0.5 0.2 -0.9 0.4 -0.4 0.2 0.1 0.5 0.6 0.9 -0.9 -0.9 3.7 -0.9 0.4 -0.3 0.7 1 2 -0.9 -0.5 -0.5 2.9 -0.9 0.5 -0.2 1 0.4 1.9 -0.1 0.3 0.2 -0.2 -0.3 0.1 1.4 -2.9 -1.9 -0.2 -0.2 -0.2 -0.2 -0.4 -0.7 -0.2 -0.2 -0.2 -0.2 -0.6 -0.8 -0.7 -0.1 -0.9 -0.8 -1.1 -0.8 0 0.3 -1.1 0.5 0.8 1.5 5.3 At2g29460 266267_at ATGSTU4 Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). 2 toxin catabolism

Glutathione metabolism


Glutathione S-transferase, Tau family 3.16 8.23
At5g62480 0.525 ATGSTU9 Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). -0.1 -0.1 0.4 -1.2 0.9 0.2 -1.2 -0.2 0.6 0 -0.3 0.2 0.9 2.9 -0.6 -1.2 -1.4 0.4 -0.2 0.4 -0.6 -0.4 -0.1 -0.1 0.2 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.3 -0.2 -0.6 -0.2 1 0 0.2 -0.5 0.1 -0.2 -0.2 -0.7 -0.4 -0.7 0 -0.3 0.1 -0.4 -0.5 1.1 -0.8 -0.6 -1.8 -0.1 -0.2 0.3 0.3 -0.2 -0.5 3 0 4.1 -0.5 2 -0.4 -0.1 -0.4 -0.3 -0.4 0.9 0.4 -0.1 0.1 0.2 0.1 0 -0.1 -0.1 -0.2 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.6 0 -0.5 0 -0.4 -0.3 -0.4 -0.1 0 0 0 -0.3 -0.3 1.6 -0.1 4 At5g62480 247435_at ATGSTU9 Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). 2 toxin catabolism





Glutathione S-transferase, Tau family 2.36 5.93
At3g22840 0.523 ELIP1 chlorophyll A-B binding family protein / early light-induced protein (ELIP) -0.1 0 0 0 -0.3 -0.7 -0.3 -0.2 -0.5 -0.2 -0.1 -0.3 0.3 1.6 -0.5 -0.6 -1 -0.3 0 -0.2 -0.3 0.1 -0.2 -0.7 -1.3 0.1 0.2 0.4 0.1 0.2 0.4 0 0.2 1.5 0.3 0.4 -0.2 -1 0.6 0.3 0 0.1 0.5 0.3 0.2 0.1 0 -0.2 0 0.4 0.1 -0.2 0.9 0.2 -0.5 -0.1 -0.3 0.3 0.4 0.5 -0.5 0.5 -1.5 -0.8 0 -0.8 0.2 1.2 0.2 0 1.4 0 0.4 0.2 0.7 0.7 0 0 1 -0.2 -0.8 -1.1 0 0.2 0.1 0.1 0.2 0.1 -0.2 -2.8 -3.3 0.1 2.2 -0.3 -2.4 -0.4 -1.3 0 1.3 0.8 -3.3 1.4 0 0 6.1 At3g22840 258321_at ELIP1 chlorophyll A-B binding family protein / early light-induced protein (ELIP) 8



Photosystems | additional photosystem II components | Early light-inducible proteins


2.74 9.52
At5g50320 0.518
radical SAM domain-containing protein / GCN5-related N-acetyltransferase (GNAT) family protein 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 -0.2 0 -0.1 0.3 0 -0.1 0.3 0 0 0 0 0 0 -0.4 0 -0.1 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.2 -0.1 -0.1 0.4 -0.1 0 0 0 0 0 0 0.1 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.4 At5g50320 248510_at
radical SAM domain-containing protein / GCN5-related N-acetyltransferase (GNAT) family protein 2

chlorophyll biosynthesis | biosynthesis of proto- and siroheme




0.26 1.82
At1g65820 0.516
putative microsomal glutathione s-transferase 0 0 0 0 0 0 -0.1 -0.1 0 0 0 0 0 0.1 0 0 0.1 0 -0.1 0 0 0 -0.1 0 0 -0.1 -0.2 -0.6 -0.1 -0.2 -0.6 -0.2 -0.2 -0.4 0 0 -0.2 -0.5 0 0.1 0 0.2 0 0.1 0 0 0 0.1 0.1 0.1 0 0 0.2 0 0.6 0 0.1 0.1 0 0 0 -0.1 -0.5 0 0.1 0 0 0 0.1 0.2 1 0.3 -0.1 0 -0.1 0 0 0.3 -0.2 -0.2 0.3 0.1 0.1 0 0 0 0 0 0 -0.1 -0.1 -0.1 0 0 -0.1 0 0 -0.1 0 0 -0.1 0 0.1 0.2 1 At1g65820 262932_at
putative microsomal glutathione s-transferase 4


Glutathione metabolism



0.54 1.68
At4g22260 0.516 IM Similar to mitochondrial alternative oxidase. im mutants have a variagated phenotype and fail to differentiate chloroplasts in the majority of their cells under high light intensity continuous illumination. The white tissues of immutans accumulate phytoe 0 0 0 -0.3 0 0 -0.3 -0.1 0 -0.3 0 -0.3 -0.5 0 -0.2 -0.2 0 -0.2 -0.5 -0.4 -0.1 -0.3 -0.1 -0.1 0 0 -0.2 0 0 -0.2 0 -0.2 0.1 -0.4 -0.2 -0.2 -0.3 -0.5 0.1 0 0 0.1 0 0 0 0 0.2 0.1 0.1 0.1 0.2 0.1 0 -0.1 0.1 -0.1 0.2 0 0 0 0 0 0.4 0.3 0.4 0.4 0.1 0 0.1 0.2 1.3 0.4 0 -0.1 0 0 0 0.3 -0.2 -0.4 -0.3 0.1 0.2 0.1 0 0 0 -0.1 0 -0.1 0.1 0 0.1 0 0 0 0 0 0 0 0 -0.1 0 0.4 1.3 At4g22260 254335_at IM Similar to mitochondrial alternative oxidase. im mutants have a variagated phenotype and fail to differentiate chloroplasts in the majority of their cells under high light intensity continuous illumination. The white tissues of immutans accumulate phytoe 10 carotenoid biosynthesis | plastid organization and biogenesis | response to high light intensity | response to temperature


Plastidial Isoprenoids (Chlorophylls, Carotenoids, Tocopherols, Plastoquinone, Phylloquinone) | Regulatory enzymes
Accessory protein/regulatory protein
0.85 1.89
At2g33590 0.513
similar to cinnamoyl-CoA reductase from Pinus taeda and Eucalyptus gunnii 0 0 0 0 0.2 0 -0.3 -0.1 0 -0.3 0 0.1 0.1 2.7 -0.1 -0.2 0 0 -0.3 0.1 0 0 0.2 0.2 0.5 -0.1 -0.3 -0.4 -0.1 -0.3 -0.4 0.1 0.1 -0.8 0.3 0.1 0 -0.8 -0.1 -0.3 -0.2 -0.3 0 -0.5 0 -0.2 -0.1 -0.2 -0.1 -0.3 0.2 -0.1 0 0 0.7 0 0.7 0 -0.1 0.3 0.9 0.3 1.9 0.1 0.9 -0.2 -0.1 0.5 0.1 0.1 0.1 -0.3 0 -0.1 0 0.1 -0.1 0.2 -1.3 -0.9 0 -0.5 -0.3 0 -0.1 -0.1 0.1 -0.2 0 -0.5 -0.7 -0.3 0.2 -0.2 -0.6 -0.1 -0.4 0 0.1 0.1 -0.5 0.5 0.4 0.3 1.3 At2g33590 255787_at
similar to cinnamoyl-CoA reductase from Pinus taeda and Eucalyptus gunnii 4

colanic acid building blocks biosynthesis | dTDP-rhamnose biosynthesis | galactose degradation I | UDP-glucose conversion | lactose degradation IV
Phenylpropanoid Metabolism | core phenylpropanoid metabolism
Phenylpropanoid pathway
1.39 4.10
At1g10370 0.512 ATGSTU17, GST30B ERD9 glutathione S-transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). 0 0 -0.3 0 -0.5 0 -0.1 0 -0.2 0.1 0 -0.1 1.1 2.5 -0.3 -0.1 0 0 0.4 0 -0.4 0.3 0.5 -0.5 -1.2 0 0.4 0.1 0 0.4 0.1 -0.2 -0.6 -1.1 0 -0.1 -0.4 -1 0.2 -0.4 0.4 -0.6 0.6 -0.6 0.3 -0.3 0 -0.6 0 0 0.2 -0.2 0.8 0.1 0.5 0.3 -0.4 0.6 0.6 0 0.1 0.3 -1.4 -0.4 0 -0.7 -0.5 3.6 -0.2 -0.4 1 -0.4 0.1 0.1 0.2 0.5 0.4 -0.3 -0.2 -1 -0.8 -0.8 -0.7 0 0 0 0.7 0 0 -1.3 -1.6 -0.1 0.9 -0.2 -1.2 -0.1 -0.5 -0.1 0.5 0.3 -0.4 0.3 0.4 0.8 2.9 At1g10370 264436_at ATGSTU17, GST30B ERD9 glutathione S-transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). 2 toxin catabolism





Glutathione S-transferase, Tau family 2.04 5.36
At5g65110 0.508 ACX2 Encodes an acyl-CoA oxidase presumably involved in long chain fatty acid biosynthesis. -0.2 0 -0.2 0 0.1 0 0 -0.3 -0.1 0.1 0 0 0.7 1.7 -0.1 0 -0.3 0 0.1 0 0 0.1 -0.1 -0.1 0 0.2 0.1 0.4 0.2 0.1 0.4 0 0.2 -0.2 -0.2 -0.1 -0.3 -0.4 -0.3 0 -0.1 0 -0.1 0.1 0 0.4 0.1 0.2 -0.2 -0.1 0 0 -0.5 -0.2 0.4 0 0 -0.4 -0.3 -0.2 0.5 0 -0.6 0 0.7 0 -0.2 0 0.3 0.4 -0.3 -0.1 0 0 -0.1 0 -0.2 0.5 0 -0.2 0 -0.5 -0.4 -0.3 -0.1 0 -0.1 0.1 0.1 0 0.1 0 -0.1 0 0 0 -0.1 -0.1 -0.1 0 0 -0.2 0.4 0 1.3 At5g65110 247176_at ACX2 Encodes an acyl-CoA oxidase presumably involved in long chain fatty acid biosynthesis. 10 acyl-CoA oxidase activity | long-chain fatty acid metabolism

Fatty acid metabolism Gluconeogenesis from lipids in seeds | fatty acid beta oxidation complex Degradation of storage lipids and straight fatty acids

0.96 2.40




























































































































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