Co-Expression Analysis of: CYP76C5 and/or CYP76C6 (At1g33730; At1g33720) Institut de Biologie Moléculaire des Plantes










































































































































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Mutant Data Set save / view heatmap as: OpenOffice Table annotation details for co-expressed genes can be found to the right of the heatmap

























































































































































MS Excel Table

























































































































































save / view all data as: Tab delimited Table


























































































































































shown are a maximum of 50 genes with r>0.5 (If more co-expressed genes with r>0.5 exist, they can be saved as Tab delimited data only) magnitude of change  [log2(mutant / wild type)]  0   0.3   0.6   0.9  1.2   1.5   1.8   2.1   2.4   2.7   >3















































































































































greater than zero                                                         



















































































































































less than zero                                                         



















































































































































Locus r-value Name Description 35S leafy, seedling (143) aba1, fresh seeds (96) abi1, fresh seeds (96) abi3, fresh seeds (96) acn1, seedlings (63) acn1, seedlings, with sucrose (63) add3, seedling (55) ag12, shoot apex (89) ag12, flower (89) akt1, roots (141) anr1, roots, dex treated, N03 depleted (64) anr1, roots, not dex treated, N03 depleted (64) anr1, roots, nitrate depleted (135) ap1, shoot apex (89) ap1, flower (89) ap2, shoot apex (89) ap2, flower (89) ap3, shoot apex (89) ap3, flower (89) ape2, mature leaf, high light (68) ape3, mature leaf, low light (68) ARR22o, seedling (115) ARR22o, seedling, zeatin (115) ar4, whole plant (104) bountifullo, juvenile leaf (48) camta1, suspension cell (138) camta1, seedling (138) cdb1, seedling (137) cdpk-yfp1, seedling (65) cdpk-yfp4, seedling (65) chs, juvenile leaf (67) cir1-PR1-LUC, whole rosette (31) cir1-ein2-PR-LUC, whole rosette (31) cls8, seedling (76) cls8, seedling, 4°C (76) clv3, shoot apex (89) clv3, flower (89) cngc1, roots (141) cngc4, roots (141) co, apical region, vegetative (94) co, apical region, reproductive, 3d (94) co, apical region, reproductive, 5d (94) co, apical region, reproductive, 7d (94) coi1, senescing leaf (60) cov, stem, base (66) cov, stem, tip (66) det2, seedling, mock, 30min (111) det2, seedling, BL, 30min (111) det2, seedling, mock, 1h (111) det2, seedling, BL, 1h (111) det2, seedling, mock, 3h (111) det2, seedling, BL, 3h (111) det2, seedling (131) ein2, senescing leaf (60) ein2-PR1-LUC, whole rosette (31) etr1, whole plant, water (99) etr1, whole plant, GA4, 60 min (99) fls2, seedling, control (81) fls2, seedling, flg22 (81) ft, apical region, vegetative (94) ft, apical region, reproductive, 3d (94) ft, apical region, reproductive, 5d (94) ft, apical region, reproductive, 7d (94) fus, fresh seeds (96) ga1, seedling, mock, 30min (111) ga1, seedling, GA3, 30min (111) ga1, seedling, mock, 1h (111) ga1, seedling, GA3, 1h (111) ga1, seedling, mock, 3h (111) ga1, seedling, GA3, 3h (111) ga1, seedling (131) gl1, rosette leaf, stage 10 (88) gl1, rosette leaf, stage 12 (88) gpa1, seedling, ABA, 3h (75) gpa1, seedling (75) gun1-gun5, whole plant, Norflurazone (98) hic, guard cell enriched (11) hic, mature leaf (11) hic, guard cell enriched, CO2 (11) hic, mature leaf, CO2 (11) iae1, hypocotyl (139) iae2, hypocotyl (139) icl2 (Col), seedling (28) icl2 (Ws), seedling (28) ir1, roots (142) ku80, whole plant (57) ku80, whole plant, bleomycin, 3d (57) leafy-GR, seedling, de (143) leafy-GR, seedling, de/cyc (143) leafy-GR, seedling, cyc (143) lfy, shoot apex (89) lfy, flower (89) lfy, apical region, vegetative (94) lfy, apical region, reproductive, 3d (94) lfy, apical region, reproductive, 5d (94) lfy, apical region, reproductive, 7d (94) ms1-ttg, flower bud, old (9) ms1-ttg, flower bud, young (9) myb61, seedling (15) myb61, seedling, sucrose (15) MYB61o, seedling (15) MYB61o, seedling, sucrose (15) nahG, senescing leaf (60) o1, seedling (46) o1, seedling, H202, 3h (46) pasta2M1, mature leaf (150) pho1, mature leaf (61) pho3, leaf (27) pmr4, mature leaf, Erysiphe cichoracearum (85) pmr4, mature leaf (85) RALF1o, seedling (152) rbohB, seedling (59) rbohB, seedling, 30°C, 1h (59) rbohB, seedling, 40°C, 1h (59) rbohC, root, elongation zone (79) rdo, fresh seeds (96) rhd2, lateral roots (29) sfr2, whole rosette, 4°C (58) sfr2, whole rosette (58) sfr2-1, whole rosette, 4°C, 24h (12) sfr2-1, whole rosette, 4°C, 24h (12) sfr3, whole rosette, 4°C (58) sfr3, whole rosette (58) sfr6, whole rosette, 4°C (58) sfr6, whole rosette (58) sfr6, whole rosette, drought (58) sfr6, seedling (76) sfr6, seedling, 4°C (76) sfr6, suspension cell, light (153) sfr6, suspension cell, dark (153) sph1, leaves, stage 5 (145) sph1, leaves, stage 14 (145) tcp13, flowers (100) tcp14, flowers (100) ttg, flower bud, old (9) ttg, flower bud, young (9) ufo1, shoot apex (89) ufo1, flower (89) gun1-gun5, seedling, far red then white light (83) gun1-gun5, seedling, dark then white light (83) zorro, seedlings, control, 2h (103) zorro, seedlings, control 24h, (103) zorro, seedlings, zearalenone, 2h (103) zorro, seedlings, zearalenone, 24h (103) Locus Probeset Name Description Annotation score GO.keywords FunCat keywords AraCyc annotations KEGG annotations BioPath annotations AcylLipid category Literature annotations Gene family 90% quantile of DE max. DE
At1g33720 1.000 CYP76C6 cytochrome P450 family protein -0.2 0 0 0 0 0 -2.1 0 0.7 0 0 0 0 0 0.4 0 0 0 0 0.5 0.5 -1 0 0 -2.3 0.1 0 -0.1 -1.1 1.1 0.2 0 1.7 1.1 0 0 -0.1 0 0 0 0 0 0 0.3 0 0 0.9 -0.3 -0.6 -0.6 1.3 0 0 0.4 1.3 0.3 0 0.6 0 0 0 0 -0.3 0 0 -0.3 -0.2 0.3 -0.7 -0.1 0 2 0 -0.9 0 0 -2.2 -3.2 0 0.8 0 -0.2 0 -0.7 0 0 -1.2 1 1.7 1.6 0 0.4 -0.4 0 -0.4 0 -0.8 -1.8 0 0 0 0.4 -1.8 0 0.9 -2.1 -0.3 0.9 0.4 0.4 0.8 1.1 0.6 1.7 0 0 0 1.4 1.2 0.5 0.5 0 -0.1 0.9 -0.5 1 0 0 -0.7 NA 0.3 0.2 0 0 -1.7 -1.4 0 1.6 0 0 0 0 0 0.4 At1g33720 261986_s_at (m) CYP76C6 cytochrome P450 family protein 1






cytochrome P450 family 3.03 5.30
At1g33730 1.000 CYP76C5 cytochrome P450 family protein -0.2 0 0 0 0 0 -2.1 0 0.7 0 0 0 0 0 0.4 0 0 0 0 0.5 0.5 -1 0 0 -2.3 0.1 0 -0.1 -1.1 1.1 0.2 0 1.7 1.1 0 0 -0.1 0 0 0 0 0 0 0.3 0 0 0.9 -0.3 -0.6 -0.6 1.3 0 0 0.4 1.3 0.3 0 0.6 0 0 0 0 -0.3 0 0 -0.3 -0.2 0.3 -0.7 -0.1 0 2 0 -0.9 0 0 -2.2 -3.2 0 0.8 0 -0.2 0 -0.7 0 0 -1.2 1 1.7 1.6 0 0.4 -0.4 0 -0.4 0 -0.8 -1.8 0 0 0 0.4 -1.8 0 0.9 -2.1 -0.3 0.9 0.4 0.4 0.8 1.1 0.6 1.7 0 0 0 1.4 1.2 0.5 0.5 0 -0.1 0.9 -0.5 1 0 0 -0.7 NA 0.3 0.2 0 0 -1.7 -1.4 0 1.6 0 0 0 0 0 0.4 At1g33730 261986_s_at (m) CYP76C5 cytochrome P450 family protein 1






cytochrome P450 family 3.03 5.30
At3g14050 0.557 RSH2 RelA/SpoT protein, putative (RSH2) 0.3 -0.7 0.2 -1.1 0.1 -0.1 -0.1 0.1 0.5 0 0.2 -0.4 0 0.3 0.9 0 0.1 0 0 0.5 0.1 -0.3 1.6 -0.3 -0.7 0.3 0.6 0.2 -0.5 0.5 0.1 0.6 1 0 0.5 0.1 0.5 0 0.2 0 0 0 0 -0.1 -0.2 -0.2 -0.3 0 -0.4 -0.8 -0.1 -0.2 0.6 -0.3 0.8 0 0 0.1 -0.6 0.2 0.4 0 0.2 -1 -0.4 -0.2 -0.4 -0.6 -0.3 -0.5 0.4 1 -0.8 -0.1 0.1 -0.1 -2.8 -2.8 -0.4 0 -0.1 -0.2 1 0.4 0.2 0.2 -0.1 0.2 2.6 2.7 0.2 0.1 -0.1 0 -0.2 -0.1 -0.2 -1.5 0.1 -0.3 0.1 -0.2 -0.2 0 0.1 -0.1 -0.4 0.8 0.3 0 0.9 0.1 0.1 -0.4 0 0.4 -0.1 -0.3 -0.9 0.3 -0.2 0 0.3 0.1 -0.2 -0.3 0.6 -0.1 0 -0.6 0.7 -0.7 0 0.1 -0.3 -1.1 0.1 0.5 -0.2 0.3 0 0 0.4 0.1 At3g14050 258207_at RSH2 RelA/SpoT protein, putative (RSH2) 4

ppGpp biosynthesis




1.74 5.57
At2g29110 0.532 ATGLR2.8 glutamate receptor family protein (GLR2.8), member of Putative ligand-gated ion channel subunit family 0.2 -0.2 -0.2 -0.2 0 0 -0.2 0 0 0.2 -0.1 0.4 0 0 0 0 0 0 0 0.3 0.9 -0.3 0 0 0 0 0 0 0 0.9 0.1 -1.1 1 0 0 0 -0.1 0.4 0.3 0 0 0 0 0.1 -0.3 0 0.6 -0.2 0.1 0.2 -0.2 0.5 0.1 0.6 -0.4 0.5 0 0 -1.4 0.2 0 0 0.4 -0.2 0.1 0.2 0 0.4 -0.2 0 -0.5 0.4 0.2 0 0 0 -2.9 -2 -0.1 0.2 0 0 0 0 0 0.5 0 0 1.1 1.1 0 0 -0.1 0 0 0 -0.3 0 0 0 0 0.2 -1.9 0 0 -0.6 0 0.4 0.4 -0.3 -0.1 0 0 0 0 -0.2 0 0 0 0.7 0.7 0 0 0 0 -0.5 0 0 0 0 1.3 0 0 0 -0.3 0 0 0 0 0 0 0 0 0 At2g29110 266780_at ATGLR2.8 glutamate receptor family protein (GLR2.8), member of Putative ligand-gated ion channel subunit family 2 calcium ion homeostasis | response to light

Ligand-Receptor Interaction | Ion channels



1.19 4.34
At3g17700 0.531 CNBT1 cyclic nucleotide-binding transporter 1, member of a family of cyclic nucleotide gated channels. 0 0 0.4 0 0 0 0.8 0 0.3 0 0 0 0 0.2 0.7 0.4 0.2 0.2 0.7 0.9 0.7 -0.8 0.1 0 -1.6 1 0.9 0 0 1.3 -0.7 0 0.4 0 0 -0.2 -0.2 0 0 0 0 0 0 -0.2 0.1 0 -0.1 0 -0.1 0 -0.2 0 0.1 -0.5 0 0.2 -0.5 0.3 -3.2 -0.1 0 0 0 -0.1 -0.1 -0.4 -0.4 -0.1 -0.2 0 -0.1 0.4 0 0 0 0 -0.8 -3 2 0 -1 -0.4 0 0 0 0.7 0 0 3.3 3.4 0.1 0.7 -0.2 -0.3 0 0 -0.2 -0.6 0 0 0 0 -2.2 0 1.4 -0.2 0 0.4 0 0.3 0 0 0 0 0 -0.5 0 0 0.8 0 -0.9 0.4 -0.5 0 -0.5 2.4 0 0 0 0 1.1 0.2 -1.6 -0.3 -1 -0.8 0.2 0.8 0 0 0 0 0 0 At3g17700 258351_at CNBT1 cyclic nucleotide-binding transporter 1, member of a family of cyclic nucleotide gated channels. 2


Ligand-Receptor Interaction | Ion channels



2.04 6.69



































































































































































page created by Juergen Ehlting 03/07/06