| Co-Expression Analysis of: | CYP76C5 and/or CYP76C6 (At1g33730; At1g33720) | Institut de Biologie Moléculaire des Plantes |
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| ________________________ | _____________________________________________ | CYPedia Home | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Mutant Data Set | save / view heatmap as: | OpenOffice Table | annotation details for co-expressed genes can be found to the right of the heatmap | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| MS Excel Table | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| save / view all data as: | Tab delimited Table | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| shown are a maximum of 50 genes with r>0.5 (If more co-expressed genes with r>0.5 exist, they can be saved as Tab delimited data only) | magnitude of change [log2(mutant / wild type)] | 0 | 0.3 | 0.6 | 0.9 | 1.2 | 1.5 | 1.8 | 2.1 | 2.4 | 2.7 | >3 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| greater than zero | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| less than zero | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Locus | r-value | Name | Description | 35S leafy, seedling (143) | aba1, fresh seeds (96) | abi1, fresh seeds (96) | abi3, fresh seeds (96) | acn1, seedlings (63) | acn1, seedlings, with sucrose (63) | add3, seedling (55) | ag12, shoot apex (89) | ag12, flower (89) | akt1, roots (141) | anr1, roots, dex treated, N03 depleted (64) | anr1, roots, not dex treated, N03 depleted (64) | anr1, roots, nitrate depleted (135) | ap1, shoot apex (89) | ap1, flower (89) | ap2, shoot apex (89) | ap2, flower (89) | ap3, shoot apex (89) | ap3, flower (89) | ape2, mature leaf, high light (68) | ape3, mature leaf, low light (68) | ARR22o, seedling (115) | ARR22o, seedling, zeatin (115) | ar4, whole plant (104) | bountifullo, juvenile leaf (48) | camta1, suspension cell (138) | camta1, seedling (138) | cdb1, seedling (137) | cdpk-yfp1, seedling (65) | cdpk-yfp4, seedling (65) | chs, juvenile leaf (67) | cir1-PR1-LUC, whole rosette (31) | cir1-ein2-PR-LUC, whole rosette (31) | cls8, seedling (76) | cls8, seedling, 4°C (76) | clv3, shoot apex (89) | clv3, flower (89) | cngc1, roots (141) | cngc4, roots (141) | co, apical region, vegetative (94) | co, apical region, reproductive, 3d (94) | co, apical region, reproductive, 5d (94) | co, apical region, reproductive, 7d (94) | coi1, senescing leaf (60) | cov, stem, base (66) | cov, stem, tip (66) | det2, seedling, mock, 30min (111) | det2, seedling, BL, 30min (111) | det2, seedling, mock, 1h (111) | det2, seedling, BL, 1h (111) | det2, seedling, mock, 3h (111) | det2, seedling, BL, 3h (111) | det2, seedling (131) | ein2, senescing leaf (60) | ein2-PR1-LUC, whole rosette (31) | etr1, whole plant, water (99) | etr1, whole plant, GA4, 60 min (99) | fls2, seedling, control (81) | fls2, seedling, flg22 (81) | ft, apical region, vegetative (94) | ft, apical region, reproductive, 3d (94) | ft, apical region, reproductive, 5d (94) | ft, apical region, reproductive, 7d (94) | fus, fresh seeds (96) | ga1, seedling, mock, 30min (111) | ga1, seedling, GA3, 30min (111) | ga1, seedling, mock, 1h (111) | ga1, seedling, GA3, 1h (111) | ga1, seedling, mock, 3h (111) | ga1, seedling, GA3, 3h (111) | ga1, seedling (131) | gl1, rosette leaf, stage 10 (88) | gl1, rosette leaf, stage 12 (88) | gpa1, seedling, ABA, 3h (75) | gpa1, seedling (75) | gun1-gun5, whole plant, Norflurazone (98) | hic, guard cell enriched (11) | hic, mature leaf (11) | hic, guard cell enriched, CO2 (11) | hic, mature leaf, CO2 (11) | iae1, hypocotyl (139) | iae2, hypocotyl (139) | icl2 (Col), seedling (28) | icl2 (Ws), seedling (28) | ir1, roots (142) | ku80, whole plant (57) | ku80, whole plant, bleomycin, 3d (57) | leafy-GR, seedling, de (143) | leafy-GR, seedling, de/cyc (143) | leafy-GR, seedling, cyc (143) | lfy, shoot apex (89) | lfy, flower (89) | lfy, apical region, vegetative (94) | lfy, apical region, reproductive, 3d (94) | lfy, apical region, reproductive, 5d (94) | lfy, apical region, reproductive, 7d (94) | ms1-ttg, flower bud, old (9) | ms1-ttg, flower bud, young (9) | myb61, seedling (15) | myb61, seedling, sucrose (15) | MYB61o, seedling (15) | MYB61o, seedling, sucrose (15) | nahG, senescing leaf (60) | o1, seedling (46) | o1, seedling, H202, 3h (46) | pasta2M1, mature leaf (150) | pho1, mature leaf (61) | pho3, leaf (27) | pmr4, mature leaf, Erysiphe cichoracearum (85) | pmr4, mature leaf (85) | RALF1o, seedling (152) | rbohB, seedling (59) | rbohB, seedling, 30°C, 1h (59) | rbohB, seedling, 40°C, 1h (59) | rbohC, root, elongation zone (79) | rdo, fresh seeds (96) | rhd2, lateral roots (29) | sfr2, whole rosette, 4°C (58) | sfr2, whole rosette (58) | sfr2-1, whole rosette, 4°C, 24h (12) | sfr2-1, whole rosette, 4°C, 24h (12) | sfr3, whole rosette, 4°C (58) | sfr3, whole rosette (58) | sfr6, whole rosette, 4°C (58) | sfr6, whole rosette (58) | sfr6, whole rosette, drought (58) | sfr6, seedling (76) | sfr6, seedling, 4°C (76) | sfr6, suspension cell, light (153) | sfr6, suspension cell, dark (153) | sph1, leaves, stage 5 (145) | sph1, leaves, stage 14 (145) | tcp13, flowers (100) | tcp14, flowers (100) | ttg, flower bud, old (9) | ttg, flower bud, young (9) | ufo1, shoot apex (89) | ufo1, flower (89) | gun1-gun5, seedling, far red then white light (83) | gun1-gun5, seedling, dark then white light (83) | zorro, seedlings, control, 2h (103) | zorro, seedlings, control 24h, (103) | zorro, seedlings, zearalenone, 2h (103) | zorro, seedlings, zearalenone, 24h (103) | Locus | Probeset | Name | Description | Annotation score | GO.keywords | FunCat keywords | AraCyc annotations | KEGG annotations | BioPath annotations | AcylLipid category | Literature annotations | Gene family | 90% quantile of DE | max. DE |
| At1g33720 | 1.000 | CYP76C6 | cytochrome P450 family protein | -0.2 | 0 | 0 | 0 | 0 | 0 | -2.1 | 0 | 0.7 | 0 | 0 | 0 | 0 | 0 | 0.4 | 0 | 0 | 0 | 0 | 0.5 | 0.5 | -1 | 0 | 0 | -2.3 | 0.1 | 0 | -0.1 | -1.1 | 1.1 | 0.2 | 0 | 1.7 | 1.1 | 0 | 0 | -0.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0.3 | 0 | 0 | 0.9 | -0.3 | -0.6 | -0.6 | 1.3 | 0 | 0 | 0.4 | 1.3 | 0.3 | 0 | 0.6 | 0 | 0 | 0 | 0 | -0.3 | 0 | 0 | -0.3 | -0.2 | 0.3 | -0.7 | -0.1 | 0 | 2 | 0 | -0.9 | 0 | 0 | -2.2 | -3.2 | 0 | 0.8 | 0 | -0.2 | 0 | -0.7 | 0 | 0 | -1.2 | 1 | 1.7 | 1.6 | 0 | 0.4 | -0.4 | 0 | -0.4 | 0 | -0.8 | -1.8 | 0 | 0 | 0 | 0.4 | -1.8 | 0 | 0.9 | -2.1 | -0.3 | 0.9 | 0.4 | 0.4 | 0.8 | 1.1 | 0.6 | 1.7 | 0 | 0 | 0 | 1.4 | 1.2 | 0.5 | 0.5 | 0 | -0.1 | 0.9 | -0.5 | 1 | 0 | 0 | -0.7 | NA | 0.3 | 0.2 | 0 | 0 | -1.7 | -1.4 | 0 | 1.6 | 0 | 0 | 0 | 0 | 0 | 0.4 | At1g33720 | 261986_s_at (m) | CYP76C6 | cytochrome P450 family protein | 1 | cytochrome P450 family | 3.03 | 5.30 | |||||||
| At1g33730 | 1.000 | CYP76C5 | cytochrome P450 family protein | -0.2 | 0 | 0 | 0 | 0 | 0 | -2.1 | 0 | 0.7 | 0 | 0 | 0 | 0 | 0 | 0.4 | 0 | 0 | 0 | 0 | 0.5 | 0.5 | -1 | 0 | 0 | -2.3 | 0.1 | 0 | -0.1 | -1.1 | 1.1 | 0.2 | 0 | 1.7 | 1.1 | 0 | 0 | -0.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0.3 | 0 | 0 | 0.9 | -0.3 | -0.6 | -0.6 | 1.3 | 0 | 0 | 0.4 | 1.3 | 0.3 | 0 | 0.6 | 0 | 0 | 0 | 0 | -0.3 | 0 | 0 | -0.3 | -0.2 | 0.3 | -0.7 | -0.1 | 0 | 2 | 0 | -0.9 | 0 | 0 | -2.2 | -3.2 | 0 | 0.8 | 0 | -0.2 | 0 | -0.7 | 0 | 0 | -1.2 | 1 | 1.7 | 1.6 | 0 | 0.4 | -0.4 | 0 | -0.4 | 0 | -0.8 | -1.8 | 0 | 0 | 0 | 0.4 | -1.8 | 0 | 0.9 | -2.1 | -0.3 | 0.9 | 0.4 | 0.4 | 0.8 | 1.1 | 0.6 | 1.7 | 0 | 0 | 0 | 1.4 | 1.2 | 0.5 | 0.5 | 0 | -0.1 | 0.9 | -0.5 | 1 | 0 | 0 | -0.7 | NA | 0.3 | 0.2 | 0 | 0 | -1.7 | -1.4 | 0 | 1.6 | 0 | 0 | 0 | 0 | 0 | 0.4 | At1g33730 | 261986_s_at (m) | CYP76C5 | cytochrome P450 family protein | 1 | cytochrome P450 family | 3.03 | 5.30 | |||||||
| At3g14050 | 0.557 | RSH2 | RelA/SpoT protein, putative (RSH2) | 0.3 | -0.7 | 0.2 | -1.1 | 0.1 | -0.1 | -0.1 | 0.1 | 0.5 | 0 | 0.2 | -0.4 | 0 | 0.3 | 0.9 | 0 | 0.1 | 0 | 0 | 0.5 | 0.1 | -0.3 | 1.6 | -0.3 | -0.7 | 0.3 | 0.6 | 0.2 | -0.5 | 0.5 | 0.1 | 0.6 | 1 | 0 | 0.5 | 0.1 | 0.5 | 0 | 0.2 | 0 | 0 | 0 | 0 | -0.1 | -0.2 | -0.2 | -0.3 | 0 | -0.4 | -0.8 | -0.1 | -0.2 | 0.6 | -0.3 | 0.8 | 0 | 0 | 0.1 | -0.6 | 0.2 | 0.4 | 0 | 0.2 | -1 | -0.4 | -0.2 | -0.4 | -0.6 | -0.3 | -0.5 | 0.4 | 1 | -0.8 | -0.1 | 0.1 | -0.1 | -2.8 | -2.8 | -0.4 | 0 | -0.1 | -0.2 | 1 | 0.4 | 0.2 | 0.2 | -0.1 | 0.2 | 2.6 | 2.7 | 0.2 | 0.1 | -0.1 | 0 | -0.2 | -0.1 | -0.2 | -1.5 | 0.1 | -0.3 | 0.1 | -0.2 | -0.2 | 0 | 0.1 | -0.1 | -0.4 | 0.8 | 0.3 | 0 | 0.9 | 0.1 | 0.1 | -0.4 | 0 | 0.4 | -0.1 | -0.3 | -0.9 | 0.3 | -0.2 | 0 | 0.3 | 0.1 | -0.2 | -0.3 | 0.6 | -0.1 | 0 | -0.6 | 0.7 | -0.7 | 0 | 0.1 | -0.3 | -1.1 | 0.1 | 0.5 | -0.2 | 0.3 | 0 | 0 | 0.4 | 0.1 | At3g14050 | 258207_at | RSH2 | RelA/SpoT protein, putative (RSH2) | 4 | ppGpp biosynthesis | 1.74 | 5.57 | |||||||
| At2g29110 | 0.532 | ATGLR2.8 | glutamate receptor family protein (GLR2.8), member of Putative ligand-gated ion channel subunit family | 0.2 | -0.2 | -0.2 | -0.2 | 0 | 0 | -0.2 | 0 | 0 | 0.2 | -0.1 | 0.4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.3 | 0.9 | -0.3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.9 | 0.1 | -1.1 | 1 | 0 | 0 | 0 | -0.1 | 0.4 | 0.3 | 0 | 0 | 0 | 0 | 0.1 | -0.3 | 0 | 0.6 | -0.2 | 0.1 | 0.2 | -0.2 | 0.5 | 0.1 | 0.6 | -0.4 | 0.5 | 0 | 0 | -1.4 | 0.2 | 0 | 0 | 0.4 | -0.2 | 0.1 | 0.2 | 0 | 0.4 | -0.2 | 0 | -0.5 | 0.4 | 0.2 | 0 | 0 | 0 | -2.9 | -2 | -0.1 | 0.2 | 0 | 0 | 0 | 0 | 0 | 0.5 | 0 | 0 | 1.1 | 1.1 | 0 | 0 | -0.1 | 0 | 0 | 0 | -0.3 | 0 | 0 | 0 | 0 | 0.2 | -1.9 | 0 | 0 | -0.6 | 0 | 0.4 | 0.4 | -0.3 | -0.1 | 0 | 0 | 0 | 0 | -0.2 | 0 | 0 | 0 | 0.7 | 0.7 | 0 | 0 | 0 | 0 | -0.5 | 0 | 0 | 0 | 0 | 1.3 | 0 | 0 | 0 | -0.3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | At2g29110 | 266780_at | ATGLR2.8 | glutamate receptor family protein (GLR2.8), member of Putative ligand-gated ion channel subunit family | 2 | calcium ion homeostasis | response to light | Ligand-Receptor Interaction | Ion channels | 1.19 | 4.34 | ||||||
| At3g17700 | 0.531 | CNBT1 | cyclic nucleotide-binding transporter 1, member of a family of cyclic nucleotide gated channels. | 0 | 0 | 0.4 | 0 | 0 | 0 | 0.8 | 0 | 0.3 | 0 | 0 | 0 | 0 | 0.2 | 0.7 | 0.4 | 0.2 | 0.2 | 0.7 | 0.9 | 0.7 | -0.8 | 0.1 | 0 | -1.6 | 1 | 0.9 | 0 | 0 | 1.3 | -0.7 | 0 | 0.4 | 0 | 0 | -0.2 | -0.2 | 0 | 0 | 0 | 0 | 0 | 0 | -0.2 | 0.1 | 0 | -0.1 | 0 | -0.1 | 0 | -0.2 | 0 | 0.1 | -0.5 | 0 | 0.2 | -0.5 | 0.3 | -3.2 | -0.1 | 0 | 0 | 0 | -0.1 | -0.1 | -0.4 | -0.4 | -0.1 | -0.2 | 0 | -0.1 | 0.4 | 0 | 0 | 0 | 0 | -0.8 | -3 | 2 | 0 | -1 | -0.4 | 0 | 0 | 0 | 0.7 | 0 | 0 | 3.3 | 3.4 | 0.1 | 0.7 | -0.2 | -0.3 | 0 | 0 | -0.2 | -0.6 | 0 | 0 | 0 | 0 | -2.2 | 0 | 1.4 | -0.2 | 0 | 0.4 | 0 | 0.3 | 0 | 0 | 0 | 0 | 0 | -0.5 | 0 | 0 | 0.8 | 0 | -0.9 | 0.4 | -0.5 | 0 | -0.5 | 2.4 | 0 | 0 | 0 | 0 | 1.1 | 0.2 | -1.6 | -0.3 | -1 | -0.8 | 0.2 | 0.8 | 0 | 0 | 0 | 0 | 0 | 0 | At3g17700 | 258351_at | CNBT1 | cyclic nucleotide-binding transporter 1, member of a family of cyclic nucleotide gated channels. | 2 | Ligand-Receptor Interaction | Ion channels | 2.04 | 6.69 | |||||||
| page created by Juergen Ehlting | 03/07/06 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||