Co-Expression Analysis of: CYP78A9 (At3g61880) Institut de Biologie Moléculaire des Plantes















































































































































































































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________________________ _____________________________________________ CYPedia Home

















































































































































































































































Stress Data Set save / view heatmap as: OpenOffice Table annotation details for co-expressed genes can be found to the right of the heatmap

















































































































































































































































MS Excel table





















































































































































































































































save / view all data as: Tab delimited table For further information on the experiments please go to the Genevestigator database using the experiment-ID given in brackets.


















































































































































































































































shown are a maximum of 50 genes with r>0.5 (If more co-expressed genes with r>0.5 exist, they can be saved as Tab delimited data only) magnitude of change [log2(treatment / control)]    0   0.3   0.6   0.9  1.2   1.5   1.8   2.1   2.4   2.7   >3











































































































































































































































greater than zero                                                         















































































































































































































































less than zero                                                         















































































































































































































































Locus r-value Name Description Agrobacterium tumefaciens, tumor at stem (8) Myzus persicae, 8h, leaf (82) Gigaspora rosea, 3d, roots (23) Heterodera schachtii, 21d, roots (24) Pseudomonas syringae hrpA, 2h, Col5 leaf (71) P. syringae DC3000 avrRpm1, 4h, Col5 leaf (71) P. syringae DC3000, 4h, Col5 leaf (71) P. syringae hrpA, 4h, Col5 leaf (71) P. syringae DC3000, 12h, Col5 leaf (71) P. syringae hrpA, 12h, Col5 leaf (71) P. syringae DC3000, 2h, Col leaf (106) P. syringae DC3000, 6h, Col leaf (106) P. syringae DC3000, 24h, Col leaf (106) P. syringae avrRpm1, 2h, Col leaf (106) P. syringae avrRpm1, 6h, Col leaf (106) P. syringae avrRpm1, 24h, Col leaf (106) P. syringae HrcC, 2h, Col leaf (106) P. syringae HrcC, 6h, Col leaf (106) P. syringae HrcC, 24h, Col leaf (106) P. syringae pv. phaseolicola, 2h, Col leaf (106) P. syringae pv. phaseolicola, 6h, Col leaf (106) P. syringae pv. phaseolicola, 24h, Col leaf (106) P. syringae, resistant, 4h, Col leaf, uninfected half (148) P. syringae, resistant, 8h, Col leaf, uninfected half (148) P. syringae, resistant, 16h, Col leaf, uninfected half (148) P. syringae, resistant, 24h, Col leaf, uninfected half (148) P. syringae, resistant, 48h, Col leaf, uninfected half (148) P. syringae, susceptible, 4h, Col leaf, uninfected half (148) P. syringae, susceptible, 8h, Col leaf, uninfected half (148) P. syringae, susceptible, 16h, Col leaf, uninfected half (148) P. syringae, susceptible, 24h, Col leaf, uninfected half (148) P. syringae, susceptible, 48h, Col leaf, uninfected half (148) Erysiphe cichoracearum race UCSC, Col leaf (85) E. cichoracearum, 3h, Col leaf (86) E. cichoracearum, 10h, Col leaf (86) E. orontii, 6h, Col leaf (146) E. orontii, 12h, Col leaf (146) E. orontii, 18h, Col leaf (146) E. orontii, 24h, Col leaf (146) E. orontii, 48h, Col leaf (146) E. orontii, 72h, Col leaf (146) E. orontii, 96h, Col leaf (146) E. orontii, 120h, Col leaf (146) Botrytis cinerea, 18h, Col leaf (147) B. cinerea, 48h, Col leaf (147) Peronospora parasitica, resistant, 72h (72) P. parasitica, susceptible, 72h (72) Phytophtora infestans, 6h, Col seedling (108) P. infestans, 12h, Col seedling (108) P. infestans, 24h, Col seedling (108) elicitor flg22, Ler seedling (81) elicitor, control MgCl2, 1h, Col leaf (107) elicitor, control MgCl2, 4h, Col leaf (107) elicitor, GST, 1h, Col leaf (107) elicitor, GST, 4h, Col leaf (107) elicitor, hrpZ, 1h, Col leaf (107) elicitor, hrpZ, 4h, Col leaf (107) elicitor, GST NPP1, 1h, Col leaf (107) elicitor, GST NPP1, 4h, Col leaf (107) elicitor, flg22, 1h, Col leaf (107) elicitor, flg22, 4h, Col leaf (107) elicitor, LPS, 1h, Col leaf (107) elicitor, LPS, 4h, Col leaf (107) wounding, 15min, leaf (127) wounding, 30 min, leaf (127) wounding, 1h, leaf (127) wounding, 3h, leaf (127) wounding, 6h, leaf (127) wounding, 12h, leaf (127) wounding, 24h, leaf (127) wounding, 15min, root (127) wounding, 30 min, root (127) wounding, 1h, root (127) wounding, 3h, root (127) wounding, 6h, root (127) wounding, 12h, root (127) wounding, 24h, root (127) ozone, 1h, seedling (25) oxidative stress (paraquat), 30min, leaf (126) oxidative stress (paraquat), 1h, leaf (126) oxidative stress (paraquat), 3h, leaf (126) oxidative stress (paraquat), 6h, leaf (126) oxidative stress (paraquat), 12h, leaf (126) oxidative stress (paraquat), 24h, leaf (126) oxidative stress (paraquat), 30min, root (126) oxidative stress (paraquat), 1h, root (126) oxidative stress (paraquat), 3h, root (126) oxidative stress (paraquat), 6h, root (126) oxidative stress (paraquat), 12h, root (126) oxidative stress (paraquat), 24h, root (126) genotoxic stress (bleomycin), 30min, leaf (126) genotoxic stress (bleomycin), 1h, leaf (126) genotoxic stress (bleomycin), 3h, leaf (126) genotoxic stress (bleomycin), 6h, leaf (126) genotoxic stress (bleomycin), 12h, leaf (126) genotoxic stress (bleomycin), 24h, leaf (126) genotoxic stress (bleomycin), 30min, root (126) genotoxic stress (bleomycin), 1h, root (126) genotoxic stress (bleomycin), 3h, root (126) genotoxic stress (bleomycin), 6h, root (126) genotoxic stress (bleomycin), 12h, root (126) genotoxic stress (bleomycin), 24h, root (126) osmotic stress (mannitol), 30min, leaf (126) osmotic stress (mannitol), 1h, leaf (126) osmotic stress (mannitol), 3h, leaf (126) osmotic stress (mannitol), 6h, leaf (126) osmotic stress (mannitol), 12h, leaf (126) osmotic stress (mannitol), 24h, leaf (126) osmotic stress (mannitol), 30min, root (126) osmotic stress (mannitol), 1h, root (126) osmotic stress (mannitol), 3h, root (126) osmotic stress (mannitol), 6h, root (126) osmotic stress (mannitol), 12h, root (126) osmotic stress (mannitol), 24h, root (126) salt (NaCl), 30min, leaf (126) salt (NaCl), 1h, leaf (126) salt (NaCl), 3h, leaf (126) salt (NaCl), 6h, leaf (126) salt (NaCl), 12h, leaf (126) salt (NaCl), 24h, leaf (126) salt (NaCl), 30min, root (126) salt (NaCl), 1h, root (126) sal (NaCl), 3h, root (126) salt (NaCl), 6h, root (126) salt (NaCl), 12h, root (126) salt (NaCl), 24h, root (126) drought (excised leaves, laminar air flow), 2 h, leaf (58) drought (15 min dry air, then closed vessels ), 15min, leaf (126) drought (15 min dry air, then closed vessels ), 30min, leaf (126) drought (15 min dry air, then closed vessels ), 1h, leaf (126) drought (15 min dry air, then closed vessels ), 3h, leaf (126) drought (15 min dry air, then closed vessels ), 6h, leaf (126) drought (15 min dry air, then closed vessels ), 12h, leaf (126) drought (15 min dry air, then closed vessels ), 24h, leaf (126) drought (15 min dry air, then closed vessels ), 15min, root (126) drought (15 min dry air, then closed vessels ), 30min, root (126) drought (15 min dry air, then closed vessels ), 1h, root (126) drought (15 min dry air, then closed vessels ), 3h, root (126) drought (15 min dry air, then closed vessels ), 6h, root (126) drought (15 min dry air, then closed vessels ), 12h, root (126) drought (15 min dry air, then closed vessels ), 24h, root (126) freezing, recovery, 3h, leaf (58) freezing, recovery, 24h, leaf (58) cold (4°C), seedling (76) cold (4°C), 24h, (58) cold (4°C), 30min, leaf (126) cold (4°C), 1h, leaf (126) cold (4°C), 3h, leaf (126) cold (4°C), 6h, leaf (126) cold (4°C), 12h, leaf (126) cold (4°C), 24h, leaf (126) cold (4°C), 30min, root (126) cold (4°C), 1h, root (126) cold (4°C), 3h, root (126) cold (4°C), 6h, root (126) cold (4°C), 12h, root (126) cold (4°C), 24h, root (126) heat (30°C), 1h, seedling (59) heat (40°C), 1h, seedling (59) heat (55°C), 10min, 1h recovery, suspension cell (26) heat (38°C), 15min, leaf (126) heat (38°C), 30min, leaf (126) heat (38°C), 1h, leaf (126) heat (38°C), 3h, leaf (126) heat (38°C), 3h, 1h recovery, leaf (126) heat (38°C), 3h, 3h recovery, leaf (126) heat (38°C), 3h, 9h recovery, leaf (126) heat (38°C), 3h, 21h recovery, leaf (126) heat (38°C), 15min, root (126) heat (38°C), 30min, root (126) heat (38°C), 1h, root (126) heat (38°C), 3h, root (126) heat (38°C), 3h, 1h recovery, root (126) heat (38°C), 3h, 3h recovery, root (126) heat (38°C), 3h, 9h recovery, root (126) heat (38°C), 3h, 21h recovery, root (126) heat (38°C), 15min, suspension cell (126) heat (38°C), 30min, suspension cell (126) heat (38°C), 1h, suspension cell (126) heat (38°C), 3h, suspension cell (126) heat (38°C), 3h, 1h recovery, suspension cell (126) heat (38°C), 3h, 3h recovery, suspension cell (126) heat (38°C), 3h, 9h recovery, suspension cell (126) heat (38°C), 3h, 21h recovery, suspension cell (126) UV-B, 15min, leaf (126) UV-B, 30min, leaf (126) UV-B, 1h, leaf (126) UV-B, 3h, leaf (126) UV-B, 6h, leaf (126) UV-B, 12h, leaf (126) UV-B, 24h, leaf (126) UV-B, 15min, root (126) UV-B, 30min, root (126) UV-B, 1h, root (126) UV-B, 3h, root (126) UV-B, 6h, root (126) UV-B, 12h, root (126) UV-B, 24h, root (126) high light, leaf (95) low light, leaf (95) low light, 3h, petiole (13) Cs, 7d, leaf (97) bleomycin, 3d, whole plant (57) Norfluazone, whole seedling (98) Zn, whole rosette, A. halleri (101) Zn, whole roots, A_halleri (101) Zn, whole rosette, A. petrea (101) Zn, whole roots, A. petrea (101) zearalenone (c2t), 14d, seedlings (103) zearalenone (c4t), 14d, seedlings (103) Cs, 7d, root (97) t-zeatin, seedling (115) fumomisin, protoplast (62) syringolin, 10h, leaf (86) isoxaben, suspension cell (10) Locus Probeset Name Description Annotation score GO.keywords FunCat keywords AraCyc annotations KEGG annotations BioPath annotations AcylLipid category Literature annotations Gene family 90% quantile of DE max. DE




















At3g61880 1.000 CYP78A9 cytochrome P450 family protein. Overexpression of this gene allows fruit growth independently of fertilization. The gene is normally expressed only in floral organs, in the funiculus at anthesis. -4.23 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 0.56 -0.47 0.3 -0.51 -0.28 -0.63 0.15 -0.42 -0.65 -0.42 -0.05 -0.05 -0.18 -2.54 -0.05 -0.05 -0.05 -0.05 -0.05 0.27 -0.05 1.17 -0.05 0.42 -0.05 -0.05 -0.05 0.59 -0.05 0.62 -0.05 -0.05 -0.05 0.23 -0.05 -0.53 1.46 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 0.5 0.74 0.62 -0.05 -0.53 0.79 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 0.2 0.35 -0.13 0.65 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 2.04 1.17 2.48 -0.16 1.74 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 1.65 1.11 -0.05 0.27 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 0.93 -0.05 -0.17 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.5 0.87 -0.53 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 0.54 -0.05 -1.33 0.92 -0.05 -0.53 1.5 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 0.85 -0.05 -1.33 -0.05 -0.53 0.72 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.05 -0.99 -0.05 At3g61880 251301_at CYP78A9 cytochrome P450 family protein. Overexpression of this gene allows fruit growth independently of fertilization. The gene is normally expressed only in floral organs, in the funiculus at anthesis. 2.5 fruit development





cytochrome P450 family 1.41 6.71




















At1g04580 0.526 AAO4 similar to aldehyde oxidases from Arabidopsis thaliana -4.22 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 At1g04580 264614_s_at AAO4 similar to aldehyde oxidases from Arabidopsis thaliana 4 abscisic acid biosynthesis






0.00 4.24




















At1g68270 0.526
AMP-dependent synthetase and ligase family protein, similar to AMP-binding protein (Brassica napus) -6.56 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 0.03 At1g68270 260485_at
AMP-dependent synthetase and ligase family protein, similar to AMP-binding protein (Brassica napus) 2






Acyl activating enzymes , CoA ligases, clade VI 0.00 6.59




















At3g56700 0.526
similar to Male sterility protein 2 (Arabidopsis thaliana) -4.74 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 0.02 At3g56700 246342_at
similar to Male sterility protein 2 (Arabidopsis thaliana) 4




Fatty acid elongation and wax and cutin metabolism

0.00 4.77



















































































































































































































































































page created by Juergen Ehlting 04/24/06